Query 016076
Match_columns 395
No_of_seqs 171 out of 1904
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 03:34:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016076.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016076hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 5.2E-36 1.1E-40 289.0 30.5 318 10-344 8-335 (358)
2 PRK11272 putative DMT superfam 100.0 4E-31 8.7E-36 250.4 28.9 280 15-340 8-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 2.4E-30 5.3E-35 245.9 28.1 279 17-340 6-290 (299)
4 PRK10532 threonine and homoser 100.0 1E-29 2.2E-34 240.8 27.5 278 12-342 9-286 (293)
5 PRK11689 aromatic amino acid e 100.0 8.2E-30 1.8E-34 241.7 25.0 285 13-340 2-290 (295)
6 PRK15430 putative chlorampheni 100.0 1.8E-29 3.9E-34 239.5 26.4 278 12-338 5-286 (296)
7 TIGR00950 2A78 Carboxylate/Ami 100.0 2.5E-29 5.5E-34 234.1 26.5 258 27-332 1-259 (260)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 4.3E-28 9.4E-33 230.9 25.8 284 18-342 5-298 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 2.3E-26 5E-31 216.7 27.2 275 17-334 3-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.8E-25 4E-30 211.6 30.3 301 12-345 10-313 (334)
11 PTZ00343 triose or hexose phos 99.9 1.4E-25 3E-30 217.2 26.9 284 13-338 47-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 1.5E-24 3.2E-29 201.8 25.8 248 15-312 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 2.8E-22 6E-27 189.0 29.1 283 12-338 4-288 (292)
14 COG2962 RarD Predicted permeas 99.9 1.9E-21 4.1E-26 175.8 22.8 281 12-341 4-287 (293)
15 COG5006 rhtA Threonine/homoser 99.9 6.6E-21 1.4E-25 167.8 24.2 275 16-342 13-287 (292)
16 KOG4510 Permease of the drug/m 99.9 5.7E-24 1.2E-28 188.1 -0.1 294 12-340 35-328 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 2.3E-20 4.9E-25 176.3 24.1 277 16-337 2-288 (290)
18 PF08449 UAA: UAA transporter 99.8 2.3E-18 4.9E-23 164.0 24.6 267 43-342 31-302 (303)
19 KOG2765 Predicted membrane pro 99.8 1.2E-18 2.6E-23 161.6 17.0 300 12-342 11-395 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 2.5E-18 5.4E-23 161.0 9.6 286 18-344 20-314 (316)
21 KOG2766 Predicted membrane pro 99.7 1.3E-16 2.8E-21 140.8 8.9 265 31-337 34-299 (336)
22 KOG1580 UDP-galactose transpor 99.7 2E-15 4.3E-20 131.8 16.0 256 45-336 54-312 (337)
23 KOG2234 Predicted UDP-galactos 99.7 1E-13 2.2E-18 129.3 27.5 299 15-342 15-327 (345)
24 COG2510 Predicted membrane pro 99.6 2.4E-15 5.2E-20 119.2 9.1 135 15-157 3-138 (140)
25 PF04142 Nuc_sug_transp: Nucle 99.6 7.9E-14 1.7E-18 127.9 18.6 231 75-328 13-244 (244)
26 KOG1581 UDP-galactose transpor 99.6 3.4E-13 7.3E-18 122.6 18.9 265 43-341 50-317 (327)
27 KOG1443 Predicted integral mem 99.5 1.5E-12 3.2E-17 118.4 21.5 253 44-335 45-313 (349)
28 KOG1444 Nucleotide-sugar trans 99.5 3.8E-12 8.3E-17 117.2 24.3 290 14-344 11-307 (314)
29 PF00892 EamA: EamA-like trans 99.5 1.5E-13 3.2E-18 112.8 10.6 125 25-157 1-125 (126)
30 COG2510 Predicted membrane pro 99.5 1E-12 2.2E-17 104.4 14.3 136 199-337 4-139 (140)
31 KOG1442 GDP-fucose transporter 99.3 4.1E-12 8.8E-17 113.7 7.6 281 32-349 45-339 (347)
32 PF00892 EamA: EamA-like trans 99.3 3.9E-12 8.5E-17 104.2 7.0 124 208-335 1-124 (126)
33 PF06800 Sugar_transport: Suga 99.3 8.6E-10 1.9E-14 101.1 21.8 252 42-334 10-268 (269)
34 COG5070 VRG4 Nucleotide-sugar 99.3 3.8E-11 8.3E-16 104.4 10.0 278 30-344 21-303 (309)
35 PRK13499 rhamnose-proton sympo 99.2 6.6E-09 1.4E-13 99.0 25.5 301 12-338 4-342 (345)
36 KOG3912 Predicted integral mem 99.2 2.1E-10 4.5E-15 103.1 14.1 280 28-336 16-333 (372)
37 TIGR00950 2A78 Carboxylate/Ami 99.2 2.5E-10 5.4E-15 106.1 15.4 134 12-154 125-260 (260)
38 KOG1583 UDP-N-acetylglucosamin 99.2 3.4E-11 7.4E-16 108.0 7.3 264 45-337 34-314 (330)
39 KOG1582 UDP-galactose transpor 99.2 9E-10 2E-14 98.6 15.1 278 25-342 53-337 (367)
40 PF13536 EmrE: Multidrug resis 99.2 1.9E-10 4.1E-15 93.1 9.3 104 49-159 2-107 (113)
41 KOG4314 Predicted carbohydrate 99.1 4.4E-10 9.6E-15 96.1 9.3 216 87-341 61-280 (290)
42 PF03151 TPT: Triose-phosphate 99.1 1.4E-09 3E-14 92.7 12.3 138 199-337 1-153 (153)
43 PRK10532 threonine and homoser 99.1 5.5E-09 1.2E-13 99.1 16.6 137 13-159 146-282 (293)
44 PRK11272 putative DMT superfam 99.0 7.1E-09 1.5E-13 98.3 16.0 138 13-158 148-285 (292)
45 PLN00411 nodulin MtN21 family 99.0 1.1E-08 2.4E-13 99.3 16.8 140 14-162 188-332 (358)
46 PF05653 Mg_trans_NIPA: Magnes 99.0 3E-08 6.4E-13 93.8 19.2 281 12-342 4-297 (300)
47 PRK15430 putative chlorampheni 99.0 6.6E-09 1.4E-13 98.7 12.0 139 194-336 4-144 (296)
48 TIGR03340 phn_DUF6 phosphonate 98.9 1.3E-08 2.8E-13 96.0 13.1 133 200-337 3-135 (281)
49 PRK11689 aromatic amino acid e 98.9 3.1E-08 6.6E-13 94.1 15.2 133 14-158 155-287 (295)
50 TIGR00803 nst UDP-galactose tr 98.9 1.2E-08 2.6E-13 92.7 10.3 214 105-335 3-222 (222)
51 TIGR00688 rarD rarD protein. T 98.9 1.8E-08 4E-13 93.5 11.6 136 198-336 2-141 (256)
52 PRK11453 O-acetylserine/cystei 98.8 1.4E-07 3.1E-12 89.7 16.6 138 14-158 142-287 (299)
53 PRK02971 4-amino-4-deoxy-L-ara 98.8 1E-07 2.2E-12 78.5 11.4 123 198-341 2-126 (129)
54 TIGR00817 tpt Tpt phosphate/ph 98.7 1E-07 2.2E-12 90.7 12.1 140 13-158 143-293 (302)
55 COG4975 GlcU Putative glucose 98.7 4E-09 8.6E-14 93.4 0.2 275 15-336 2-284 (288)
56 PF03151 TPT: Triose-phosphate 98.6 1.1E-06 2.4E-11 74.8 14.5 133 16-155 1-150 (153)
57 PF13536 EmrE: Multidrug resis 98.6 1E-07 2.2E-12 77.1 7.3 108 232-340 2-109 (113)
58 PTZ00343 triose or hexose phos 98.6 2E-06 4.3E-11 83.6 16.2 139 13-157 192-347 (350)
59 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.8E-06 3.8E-11 81.8 14.4 129 14-158 151-288 (290)
60 PRK15051 4-amino-4-deoxy-L-ara 98.5 6.1E-07 1.3E-11 72.1 9.2 69 83-157 40-108 (111)
61 COG0697 RhaT Permeases of the 98.5 3.9E-06 8.6E-11 78.7 16.0 135 13-158 152-287 (292)
62 PRK02971 4-amino-4-deoxy-L-ara 98.4 4.7E-06 1E-10 68.6 12.1 119 15-158 2-122 (129)
63 PRK15051 4-amino-4-deoxy-L-ara 98.4 1.3E-06 2.8E-11 70.2 7.7 66 271-336 43-108 (111)
64 COG2962 RarD Predicted permeas 98.3 5.6E-06 1.2E-10 75.9 9.5 142 195-339 4-146 (293)
65 COG5006 rhtA Threonine/homoser 98.2 2.7E-05 5.8E-10 69.8 12.6 137 13-158 146-282 (292)
66 PF06027 DUF914: Eukaryotic pr 98.2 1.9E-05 4.1E-10 75.5 12.2 141 12-160 165-307 (334)
67 KOG2922 Uncharacterized conser 98.1 1.5E-05 3.2E-10 73.9 9.1 276 12-341 18-310 (335)
68 PF06379 RhaT: L-rhamnose-prot 97.9 0.0042 9.1E-08 58.8 21.9 301 12-338 4-341 (344)
69 PF08449 UAA: UAA transporter 97.9 0.00018 3.9E-09 68.5 12.9 131 208-344 10-143 (303)
70 PRK10452 multidrug efflux syst 97.9 8.9E-05 1.9E-09 60.0 8.9 69 271-339 36-105 (120)
71 PF06800 Sugar_transport: Suga 97.9 0.00017 3.7E-09 66.5 11.7 117 12-136 135-251 (269)
72 KOG4510 Permease of the drug/m 97.9 8.4E-06 1.8E-10 73.5 2.6 137 195-339 35-171 (346)
73 PF05653 Mg_trans_NIPA: Magnes 97.8 0.00011 2.4E-09 69.6 9.0 120 194-337 3-122 (300)
74 PF04657 DUF606: Protein of un 97.7 0.00045 9.9E-09 57.7 10.8 132 199-334 2-138 (138)
75 COG2076 EmrE Membrane transpor 97.6 0.00026 5.6E-09 55.5 7.1 65 87-157 37-102 (106)
76 PRK10650 multidrug efflux syst 97.6 0.0014 3.1E-08 52.1 11.1 63 88-156 43-106 (109)
77 PRK10452 multidrug efflux syst 97.5 0.00039 8.4E-09 56.3 7.3 67 86-158 36-103 (120)
78 PRK09541 emrE multidrug efflux 97.5 0.00048 1E-08 55.0 7.6 67 86-158 36-103 (110)
79 PRK09541 emrE multidrug efflux 97.5 0.00065 1.4E-08 54.3 8.3 67 272-338 37-104 (110)
80 PF04657 DUF606: Protein of un 97.5 0.0026 5.7E-08 53.1 12.1 130 17-155 3-138 (138)
81 PRK11431 multidrug efflux syst 97.4 0.00089 1.9E-08 52.9 7.6 65 87-157 36-101 (105)
82 PF07857 DUF1632: CEO family ( 97.4 0.0035 7.6E-08 57.6 12.4 198 16-224 1-209 (254)
83 PRK10650 multidrug efflux syst 97.3 0.0019 4.2E-08 51.4 8.7 62 274-335 44-106 (109)
84 PRK11431 multidrug efflux syst 97.3 0.002 4.2E-08 51.0 8.3 66 272-337 36-102 (105)
85 PF10639 UPF0546: Uncharacteri 97.2 0.00063 1.4E-08 54.2 5.5 110 21-156 2-112 (113)
86 COG3238 Uncharacterized protei 97.2 0.0032 6.8E-08 52.8 9.5 139 196-337 3-146 (150)
87 COG2076 EmrE Membrane transpor 97.2 0.0015 3.2E-08 51.3 6.8 65 274-338 39-104 (106)
88 KOG1441 Glucose-6-phosphate/ph 97.2 0.0011 2.3E-08 62.9 6.9 138 13-158 161-307 (316)
89 PF07857 DUF1632: CEO family ( 97.1 0.0013 2.7E-08 60.5 6.9 132 199-342 1-139 (254)
90 PF04142 Nuc_sug_transp: Nucle 97.0 0.0017 3.7E-08 59.8 7.1 79 263-342 16-94 (244)
91 PF00893 Multi_Drug_Res: Small 97.0 0.0041 8.8E-08 48.2 7.5 57 272-328 36-93 (93)
92 KOG2765 Predicted membrane pro 96.9 0.006 1.3E-07 58.1 9.0 142 12-159 244-391 (416)
93 COG4975 GlcU Putative glucose 96.9 0.0009 1.9E-08 60.0 3.3 132 199-340 3-139 (288)
94 PRK13499 rhamnose-proton sympo 96.8 0.0065 1.4E-07 58.4 9.1 138 195-338 4-154 (345)
95 PF10639 UPF0546: Uncharacteri 96.8 0.015 3.3E-07 46.4 9.6 110 204-335 2-112 (113)
96 PF00893 Multi_Drug_Res: Small 96.7 0.0044 9.6E-08 48.0 5.7 54 89-148 38-92 (93)
97 KOG2922 Uncharacterized conser 96.3 0.0032 6.9E-08 58.8 3.2 122 192-338 15-137 (335)
98 KOG2234 Predicted UDP-galactos 95.9 0.21 4.5E-06 47.6 13.4 139 199-338 16-165 (345)
99 KOG1581 UDP-galactose transpor 95.9 0.14 3E-06 47.7 11.6 139 12-158 169-313 (327)
100 TIGR00803 nst UDP-galactose tr 95.9 0.04 8.8E-07 49.8 8.3 59 91-155 163-221 (222)
101 COG3238 Uncharacterized protei 95.7 0.29 6.3E-06 41.1 11.8 137 13-156 3-144 (150)
102 PF07168 Ureide_permease: Urei 94.2 0.065 1.4E-06 49.8 4.5 129 20-155 1-143 (336)
103 KOG1580 UDP-galactose transpor 94.0 0.037 8E-07 49.5 2.4 136 201-342 16-162 (337)
104 KOG1444 Nucleotide-sugar trans 93.2 0.95 2.1E-05 42.6 10.3 132 201-336 15-148 (314)
105 KOG1443 Predicted integral mem 93.1 0.77 1.7E-05 43.0 9.3 122 218-340 36-159 (349)
106 KOG4831 Unnamed protein [Funct 92.2 0.38 8.1E-06 37.4 5.2 111 19-157 7-124 (125)
107 KOG4314 Predicted carbohydrate 92.1 0.14 3E-06 44.7 3.0 63 277-339 65-127 (290)
108 COG5070 VRG4 Nucleotide-sugar 90.8 1.2 2.6E-05 39.7 7.7 136 16-158 156-296 (309)
109 KOG1582 UDP-galactose transpor 89.6 2.1 4.5E-05 39.5 8.2 141 13-160 188-334 (367)
110 KOG3912 Predicted integral mem 88.0 2.4 5.2E-05 39.3 7.6 65 274-338 95-159 (372)
111 PRK13108 prolipoprotein diacyl 87.3 35 0.00076 34.4 17.8 22 317-338 254-275 (460)
112 PF06379 RhaT: L-rhamnose-prot 87.0 2.3 5E-05 40.6 7.2 140 195-338 4-154 (344)
113 PRK02237 hypothetical protein; 85.0 7 0.00015 30.8 7.7 55 98-158 49-105 (109)
114 PF03547 Mem_trans: Membrane t 84.1 26 0.00055 34.3 13.5 20 264-283 62-81 (385)
115 KOG4831 Unnamed protein [Funct 81.6 5 0.00011 31.3 5.6 115 203-336 8-124 (125)
116 PRK02237 hypothetical protein; 81.5 4.7 0.0001 31.7 5.5 47 294-340 62-108 (109)
117 PF02694 UPF0060: Uncharacteri 80.4 2.3 5E-05 33.3 3.5 46 295-340 61-106 (107)
118 PF02694 UPF0060: Uncharacteri 80.3 19 0.0004 28.4 8.4 55 98-158 48-103 (107)
119 PF07168 Ureide_permease: Urei 79.5 1.2 2.6E-05 41.7 2.0 130 204-336 2-145 (336)
120 PF03348 Serinc: Serine incorp 79.5 72 0.0016 32.0 22.2 60 270-342 249-308 (429)
121 PF04342 DUF486: Protein of un 75.5 30 0.00065 27.2 8.3 47 104-156 59-106 (108)
122 PF05297 Herpes_LMP1: Herpesvi 75.5 0.9 2E-05 41.8 0.0 15 193-207 102-116 (381)
123 KOG1442 GDP-fucose transporter 75.2 5.4 0.00012 37.0 4.8 142 13-161 183-330 (347)
124 PF06570 DUF1129: Protein of u 69.5 82 0.0018 28.0 11.3 30 78-108 145-174 (206)
125 PF04342 DUF486: Protein of un 69.5 5.9 0.00013 31.0 3.2 33 304-336 75-107 (108)
126 COG1742 Uncharacterized conser 68.5 18 0.00038 28.3 5.6 47 294-340 61-107 (109)
127 KOG1583 UDP-N-acetylglucosamin 68.1 56 0.0012 30.6 9.6 135 13-158 162-314 (330)
128 KOG2766 Predicted membrane pro 63.4 5.4 0.00012 36.6 2.3 135 12-156 163-297 (336)
129 COG3169 Uncharacterized protei 60.5 14 0.0003 28.5 3.6 35 303-337 81-115 (116)
130 COG4657 RnfA Predicted NADH:ub 58.6 1.2E+02 0.0025 26.0 11.4 57 192-248 126-187 (193)
131 COG1742 Uncharacterized conser 56.1 28 0.00061 27.2 4.7 47 106-158 57-104 (109)
132 KOG2568 Predicted membrane pro 55.8 2.5E+02 0.0053 28.8 17.1 27 317-343 420-446 (518)
133 PF03595 SLAC1: Voltage-depend 53.4 1.5E+02 0.0032 28.2 10.6 78 143-248 7-92 (330)
134 PRK12650 putative monovalent c 51.6 3.9E+02 0.0085 29.9 22.4 37 77-115 620-656 (962)
135 PF05977 MFS_3: Transmembrane 50.3 3.1E+02 0.0066 28.3 20.0 15 298-312 353-367 (524)
136 PF06609 TRI12: Fungal trichot 48.6 3.5E+02 0.0076 28.5 21.4 21 13-33 240-260 (599)
137 PRK06638 NADH:ubiquinone oxido 46.0 2.1E+02 0.0046 25.2 12.4 33 306-338 133-167 (198)
138 PF06166 DUF979: Protein of un 39.1 3.4E+02 0.0074 25.7 10.3 25 227-251 119-143 (308)
139 PF15102 TMEM154: TMEM154 prot 39.0 34 0.00073 28.6 3.1 24 322-345 66-89 (146)
140 TIGR02865 spore_II_E stage II 30.7 7.3E+02 0.016 27.0 16.3 45 106-156 10-54 (764)
141 COG3169 Uncharacterized protei 30.4 2.6E+02 0.0057 21.7 9.7 34 118-157 81-114 (116)
142 PF15471 TMEM171: Transmembran 27.9 1.4E+02 0.0029 27.8 5.2 20 319-338 161-180 (319)
143 PF11381 DUF3185: Protein of u 26.8 50 0.0011 23.1 1.8 18 142-159 1-18 (59)
144 COG3086 RseC Positive regulato 26.4 23 0.00051 29.4 0.2 27 286-312 69-95 (150)
145 TIGR00910 2A0307_GadC glutamat 25.6 7.3E+02 0.016 25.3 11.7 15 226-240 330-344 (507)
146 PF10225 DUF2215: Uncharacteri 24.5 3.3E+02 0.0071 25.1 7.4 206 146-390 14-223 (249)
147 PF11361 DUF3159: Protein of u 23.7 3.9E+02 0.0084 23.4 7.3 72 108-216 28-99 (187)
148 COG3965 Predicted Co/Zn/Cd cat 23.7 6E+02 0.013 23.7 11.7 112 14-131 95-212 (314)
149 PF12292 DUF3624: Protein of u 22.0 3.3E+02 0.0073 20.1 5.6 45 19-64 25-69 (77)
150 PF08507 COPI_assoc: COPI asso 21.8 90 0.0019 25.7 2.8 15 321-335 89-103 (136)
151 PLN00028 nitrate transmembrane 21.4 5.8E+02 0.013 25.5 9.2 14 322-335 417-430 (476)
152 PRK10666 ammonium transporter; 21.2 8.5E+02 0.018 24.4 17.6 54 195-249 302-355 (428)
153 COG2323 Predicted membrane pro 21.0 6.3E+02 0.014 22.9 9.6 81 45-131 4-84 (224)
154 KOG0682 Ammonia permease [Inor 21.0 9E+02 0.02 24.7 12.4 54 195-250 310-363 (500)
155 PRK10263 DNA translocase FtsK; 20.6 5.4E+02 0.012 29.8 9.1 14 143-156 25-38 (1355)
156 PF06570 DUF1129: Protein of u 20.4 6E+02 0.013 22.4 10.7 14 143-156 89-102 (206)
157 PF10754 DUF2569: Protein of u 20.1 5.1E+02 0.011 21.5 7.5 31 193-223 116-146 (149)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=5.2e-36 Score=289.03 Aligned_cols=318 Identities=27% Similarity=0.486 Sum_probs=252.6
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhc-cccCCCcHHHHHHHHHHHhh
Q 016076 10 LIHGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILER-NCRSKLNWKILFLGFLSGLF 88 (395)
Q Consensus 10 ~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~ 88 (395)
+++..++++.|++..+.++...++.|.+.+.|++|..++++|+.++.++++++++.+++ +.+++.+++++..+.+.|++
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFL 87 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999999999999999999998876544 33344568889999999999
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHh------cccccccccccccccchhHHHHHHHHHHHhhhccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSI------GLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGV 162 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~------l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~ 162 (395)
+ .+++.+++++++|+++++++++.++.|++++++++++ +|||++++ |++|++++++|+.++...+++
T Consensus 88 g-~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~ 160 (358)
T PLN00411 88 G-SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGP 160 (358)
T ss_pred H-HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCc
Confidence 8 4788899999999999999999999999999999999 58998888 599999999999998864442
Q ss_pred ccccc--cccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHH
Q 016076 163 EIKIW--STHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAI 240 (395)
Q Consensus 163 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i 240 (395)
..-.. +...+..+... .+ .........|++++++++++|++|++++|+..++++++...++++..++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~ 231 (358)
T PLN00411 161 RVFVASSPPYLNFRQLSP----PL-----SSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSI 231 (358)
T ss_pred cccccccccccccccccc----cc-----CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHH
Confidence 11000 00000000000 00 111223466999999999999999999999999987766777787777777
Q ss_pred HHHHHHHHhcC-CcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccch
Q 016076 241 QAVAFALCMEK-NWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHL 319 (395)
Q Consensus 241 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~ 319 (395)
...+.....+. +...|..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++
T Consensus 232 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~ 310 (358)
T PLN00411 232 VTSMIGLVVEKNNPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYL 310 (358)
T ss_pred HHHHHHHHHccCCcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcH
Confidence 76666666543 2333322222234557777775 568999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHhhhhheeeecCccccc
Q 016076 320 GSLLGATLIVCGLYAVLWGKGKEMK 344 (395)
Q Consensus 320 ~~~~G~~li~~G~~l~~~~~~~~~~ 344 (395)
.+++|+++|++|+++..++++||.+
T Consensus 311 ~~~iG~~LIl~Gv~l~~~~~~~~~~ 335 (358)
T PLN00411 311 GCLIGGILITLGFYAVMWGKANEEK 335 (358)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 9999999999999999876666533
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=4e-31 Score=250.41 Aligned_cols=280 Identities=15% Similarity=0.161 Sum_probs=232.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHH
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQ 94 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (395)
.-++..++..++||.++++.|...+ +++|.+++++|+.++.++++++...++++ ..+++++......|.++...++
T Consensus 8 ~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 8 PLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHHHHHHHHH
Confidence 3456677888999999999999888 49999999999999999988876543322 2356788888888888766788
Q ss_pred HHHHHHh-hccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccc
Q 016076 95 NLFVESL-VLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDL 173 (395)
Q Consensus 95 ~~~~~al-~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~ 173 (395)
.+++++. ++++++.++++.++.|+++.+++++ +|||+++++ ++|++++++|+.++...+
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~------~~~~~la~~Gv~ll~~~~------------- 143 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLE------WLGIAIGLAGIVLLNSGG------------- 143 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhH------HHHHHHHHHhHHHHhcCc-------------
Confidence 8999999 9999999999999999999999986 699999995 999999999999886411
Q ss_pred cccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCc
Q 016076 174 LHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNW 253 (395)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 253 (395)
+.+....|++++++++++||.|.+..|+..++ ++...+.+++..+.+...+.....+.+.
T Consensus 144 ------------------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (292)
T PRK11272 144 ------------------NLSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERL 203 (292)
T ss_pred ------------------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 11234579999999999999999999997654 2355677888888887777665543321
Q ss_pred ccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhh
Q 016076 254 DQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLY 333 (395)
Q Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~ 333 (395)
.. ..+...|..+++.+++++.+++.++++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus 204 ~~--~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~ 281 (292)
T PRK11272 204 TA--LPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV 281 (292)
T ss_pred cc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 11 1233578899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeecCc
Q 016076 334 AVLWGKG 340 (395)
Q Consensus 334 l~~~~~~ 340 (395)
+..+.++
T Consensus 282 ~~~~~~~ 288 (292)
T PRK11272 282 LVTLGKY 288 (292)
T ss_pred HHHHHHh
Confidence 8866443
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.98 E-value=2.4e-30 Score=245.86 Aligned_cols=279 Identities=20% Similarity=0.192 Sum_probs=216.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHH
Q 016076 17 ALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNL 96 (395)
Q Consensus 17 ~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (395)
.++.++++++||.++++.|...++ ++|.+++++|+.++.+.+.++. + ++ +.+++ ..+..|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~--~-~~---~~~~~---~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFV--A-RP---KVPLN---LLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHh--c-CC---CCchH---HHHHHHHHHHHHHHHH
Confidence 466889999999999999998885 9999999999999876665543 1 11 12222 3344455544456667
Q ss_pred HHHHhhc-cChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccc
Q 016076 97 FVESLVL-TSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLH 175 (395)
Q Consensus 97 ~~~al~~-~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~ 175 (395)
++.++++ .+++.++++.++.|+++.+++++++|||+++++ +++++++++|+.++...+
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~------~~~~~l~~~Gv~ll~~~~--------------- 134 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQ------LAGIALAIFGVLVLIEDS--------------- 134 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHH------HHHHHHHHHhHHHhcccc---------------
Confidence 7889998 588999999999999999999999999999995 999999999999987421
Q ss_pred cCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCc--chHHHHHHHHHHHHHHHHHHHhcCCc
Q 016076 176 HAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQ--YSSTALMCVMGAIQAVAFALCMEKNW 253 (395)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~ 253 (395)
.+.......|+++++.++++|+.|.++.|+..++.+.+ .....+.+..+.+.........+.+.
T Consensus 135 --------------~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (299)
T PRK11453 135 --------------LNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSA 200 (299)
T ss_pred --------------CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCch
Confidence 11112235799999999999999999999987665432 23334444444443333333333211
Q ss_pred ---ccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhh
Q 016076 254 ---DQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVC 330 (395)
Q Consensus 254 ---~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~ 330 (395)
..+...+...|..+++.+++++.++|.++++++++.++.+++.+.+++|+++.+++++++||.+++.+++|+++|++
T Consensus 201 ~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~ 280 (299)
T PRK11453 201 TMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMA 280 (299)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 11122234578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeecCc
Q 016076 331 GLYAVLWGKG 340 (395)
Q Consensus 331 G~~l~~~~~~ 340 (395)
|+++..++++
T Consensus 281 gv~l~~~~~~ 290 (299)
T PRK11453 281 GLYINVFGLR 290 (299)
T ss_pred HHHHHhcchh
Confidence 9998877664
No 4
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.97 E-value=1e-29 Score=240.81 Aligned_cols=278 Identities=14% Similarity=0.090 Sum_probs=222.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
++.++++++++++++|+..+.+.|+..++ ++|.+++++|+.++.++++++... ++ ++.+++++...+..|.+. .
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~--~~--~~~~~~~~~~~~~~g~~~-~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKP--WR--LRFAKEQRLPLLFYGVSL-G 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhH--Hh--ccCCHHHHHHHHHHHHHH-H
Confidence 56889999999999999999999999986 999999999999999888876422 11 124567888888888876 4
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHV 171 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 171 (395)
..+.+++++++|++++.++++.++.|+++.+++ +||+++ ..++.++++|+.++... +
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--------~~~~~i~~~Gv~li~~~-~---------- 139 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--------FVWVVLAVLGLWFLLPL-G---------- 139 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--------HHHHHHHHHHHheeeec-C----------
Confidence 788899999999999999999999999998887 355432 45677889999887631 1
Q ss_pred cccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcC
Q 016076 172 DLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEK 251 (395)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 251 (395)
.+..+....|++++++++++|+.|.+..|+..++++ +... .+....+++...+.....+.
T Consensus 140 ------------------~~~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~ 199 (293)
T PRK10532 140 ------------------QDVSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAG 199 (293)
T ss_pred ------------------CCcccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccC
Confidence 111223457999999999999999999999987754 3554 45556666666665554332
Q ss_pred CcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhh
Q 016076 252 NWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCG 331 (395)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G 331 (395)
... .+...|..++++|++++.++|.++++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|++|
T Consensus 200 -~~~---~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~ 275 (293)
T PRK10532 200 -EAL---WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAA 275 (293)
T ss_pred -ccc---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 111 1223455678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeecCccc
Q 016076 332 LYAVLWGKGKE 342 (395)
Q Consensus 332 ~~l~~~~~~~~ 342 (395)
++...+..+|+
T Consensus 276 ~~~~~~~~~~~ 286 (293)
T PRK10532 276 SMGSTLTIRRE 286 (293)
T ss_pred HHHHHhcCCCC
Confidence 99886654443
No 5
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=8.2e-30 Score=241.75 Aligned_cols=285 Identities=13% Similarity=0.047 Sum_probs=213.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
+.++++++++++++||.+++..|...++ ++|..+.++|+.++.+++.++. . +++.++ .. +.....+.+....
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~--~-~~~~~~---~~-~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTV--G-FPRLRQ---FP-KRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHc--c-cccccc---cc-HHHHHHHhHHHHH
Confidence 3466789999999999999999999885 9999999999999998887653 1 111111 11 2233445555557
Q ss_pred HHHHHHHHhhc----cChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccc
Q 016076 93 SQNLFVESLVL----TSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWS 168 (395)
Q Consensus 93 ~~~~~~~al~~----~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~ 168 (395)
++.+++.++++ .++++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...+.+ ...
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~------~~g~~l~~~Gv~li~~~~~~-~~~-- 144 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLL------IPGLLLALAGVAWVLGGDNG-LSL-- 144 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHH------HHHHHHHHHhHhheecCCcc-chh--
Confidence 77777777764 577888999999999999999999999999994 99999999999998742110 000
Q ss_pred ccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH
Q 016076 169 THVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALC 248 (395)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (395)
.+ . .........|++++++++++||+|+++.|+..++++ +.... ...+.+.+.+....
T Consensus 145 --~~-~---------------~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~ 202 (295)
T PRK11689 145 --AE-L---------------INNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFL 202 (295)
T ss_pred --hh-h---------------hhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHH
Confidence 00 0 001112356999999999999999999999977654 44432 22333333333333
Q ss_pred hcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHH
Q 016076 249 MEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLI 328 (395)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li 328 (395)
.+... . ..+...|..+++.++ +++++|.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|
T Consensus 203 ~~~~~--~-~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI 278 (295)
T PRK11689 203 SPQPA--M-VFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMV 278 (295)
T ss_pred hcCcc--c-cCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 22211 1 122346777777775 7899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeecCc
Q 016076 329 VCGLYAVLWGKG 340 (395)
Q Consensus 329 ~~G~~l~~~~~~ 340 (395)
+.|+++..+.++
T Consensus 279 ~~gv~~~~~~~~ 290 (295)
T PRK11689 279 TAGSLLCWLATR 290 (295)
T ss_pred HHhHHHHhhhHh
Confidence 999988865443
No 6
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.97 E-value=1.8e-29 Score=239.52 Aligned_cols=278 Identities=15% Similarity=0.125 Sum_probs=206.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc--CC-CcHHHHHHHHHHHhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCR--SK-LNWKILFLGFLSGLF 88 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~g~~ 88 (395)
++.+|++++++++++||..+++.|.. + +++|.++.++|+.++.+++.++...+++... ++ .+++++.. ...+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~-~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y-YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFM-LAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c-CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHH-HHHHHH
Confidence 56799999999999999999999975 4 4999999999999998887776544322111 00 13444433 335666
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWS 168 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~ 168 (395)
+...++.++++|++++++++++++.++.|+++.+++++++|||+++++ ++|++++++|+.++...+|
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~------~~g~~l~~~Gv~li~~~~~------- 148 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQ------WLAVILAICGVLVQLWTFG------- 148 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 666899999999999999999999999999999999999999999995 9999999999999874211
Q ss_pred ccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHH
Q 016076 169 THVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFAL 247 (395)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~ 247 (395)
+ . .+++++++++||.|.+..|+..++.. .......+....+.+...+.
T Consensus 149 -----------------------~--~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 197 (296)
T PRK15430 149 -----------------------S--L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI-- 197 (296)
T ss_pred -----------------------C--c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH--
Confidence 1 1 14678899999999999888754211 11222223333333222111
Q ss_pred HhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHH
Q 016076 248 CMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATL 327 (395)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~l 327 (395)
...+...+...+...+..+...|+ .+.++|.++++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++
T Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~l 275 (296)
T PRK15430 198 -ADSSTSHMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAF 275 (296)
T ss_pred -ccCCcccccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 111111111111112334444455 677999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhheeeec
Q 016076 328 IVCGLYAVLWG 338 (395)
Q Consensus 328 i~~G~~l~~~~ 338 (395)
|++|+.+....
T Consensus 276 I~~~~~v~~~~ 286 (296)
T PRK15430 276 IWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHH
Confidence 99887777544
No 7
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.97 E-value=2.5e-29 Score=234.10 Aligned_cols=258 Identities=24% Similarity=0.306 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccCh
Q 016076 27 FAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSA 106 (395)
Q Consensus 27 ~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 106 (395)
||.+++..|...++..|+.+..+.|+..+.+++.++...+ .+++++...+..|.++..+++.++++|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8899999999887668999999999999888887754322 235677778888888878999999999999999
Q ss_pred hHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccc
Q 016076 107 TFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASV 186 (395)
Q Consensus 107 ~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (395)
++++++.++.|+++.+++++++|||++++ |++|+.++++|+.++... +
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~~-~------------------------- 121 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLSD-G------------------------- 121 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhccC-C-------------------------
Confidence 99999999999999999999999999999 599999999999998641 1
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCC-cchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHH
Q 016076 187 PLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPC-QYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLV 265 (395)
Q Consensus 187 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (395)
+.+....|++++++++++|+.+.+..|+..++.+. +.....+.+..+.+...+.....+++. .. +...|.
T Consensus 122 -----~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~ 192 (260)
T TIGR00950 122 -----NLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWG 192 (260)
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHH
Confidence 12344689999999999999999999999877652 234555678888888877776644322 11 334677
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhh
Q 016076 266 TVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGL 332 (395)
Q Consensus 266 ~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~ 332 (395)
.+++.+++++.++|.++++++++.++.+++.+.+++|+++.+++++++||+++..+++|++++++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 193 ALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 7899999999999999999999999999999999999999999999999999999999999999986
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.96 E-value=4.3e-28 Score=230.88 Aligned_cols=284 Identities=15% Similarity=0.057 Sum_probs=220.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHH
Q 016076 18 LMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLF 97 (395)
Q Consensus 18 l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (395)
++.++..++-....++.|+..++-..|..++++|+.++.+.+.+... .+.+++++.++++++.++..|++. .+++.+.
T Consensus 5 ~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~ 82 (302)
T TIGR00817 5 LLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTS 82 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHH
Confidence 34455555556667889999985356999999999988777655421 122333456789999999999997 5889999
Q ss_pred HHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccC
Q 016076 98 VESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHA 177 (395)
Q Consensus 98 ~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~ 177 (395)
+++++|+++++++++.++.|+++++++++++|||++++. +.+++++++|+.+...
T Consensus 83 ~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~------~~~l~l~~~Gv~l~~~------------------- 137 (302)
T TIGR00817 83 NVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTL------WLSLLPIVGGVALASD------------------- 137 (302)
T ss_pred HHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHhhhcC-------------------
Confidence 999999999999999999999999999999999999995 9999999999987531
Q ss_pred CCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhh--hcCCcchHHHHHHHHHHHHHHHHHHHhcCCc-c
Q 016076 178 GGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSE--EYPCQYSSTALMCVMGAIQAVAFALCMEKNW-D 254 (395)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~ 254 (395)
.+.+....|++++++++++|++|.+..|+..+ ++ ++...+.+++..+++.+.|.....+... .
T Consensus 138 -------------~~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 203 (302)
T TIGR00817 138 -------------TELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFL 203 (302)
T ss_pred -------------CcccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHH
Confidence 11223457999999999999999999999887 55 4689999999999999998887654311 0
Q ss_pred --cccc-----cchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHH
Q 016076 255 --QWKL-----GWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATL 327 (395)
Q Consensus 255 --~~~~-----~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~l 327 (395)
.+.. .....+...+..++.+....+.+++.++++.++++.+++.+++|+++++++++++||+++..+++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~l 283 (302)
T TIGR00817 204 PHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGI 283 (302)
T ss_pred HHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHH
Confidence 0100 000112112233332333333466689999999999999999999999999999999999999999999
Q ss_pred HhhhhheeeecCccc
Q 016076 328 IVCGLYAVLWGKGKE 342 (395)
Q Consensus 328 i~~G~~l~~~~~~~~ 342 (395)
+++|++++.+.|.+|
T Consensus 284 il~Gv~l~~~~k~~~ 298 (302)
T TIGR00817 284 AIAGVFLYSRVKAQK 298 (302)
T ss_pred HHHHHHHHHHHhccC
Confidence 999999987655433
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.95 E-value=2.3e-26 Score=216.72 Aligned_cols=275 Identities=18% Similarity=0.176 Sum_probs=201.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhh-ccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 17 ALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILE-RNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 17 ~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
.++.+.++++|+..++..|...++ -++ ..+++.....+++.++...+. +..++..+++.+. ..+.+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWL-LLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHH-HHHHHHHHHHHHHH
Confidence 567889999999999999966553 344 347777777777777665432 2233333334444 44445555569999
Q ss_pred HHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccc
Q 016076 96 LFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLH 175 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~ 175 (395)
++++++++.+++.++++.++.|+++.+++++++|||+++++ ++|+.+++.|+.++...+
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~------~~g~~~~~~Gv~ll~~~~--------------- 137 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLA------WLGILIITLGLLVLGLSR--------------- 137 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHH------HHHHHHHHHHHHHHhccc---------------
Confidence 99999999999999999999999999999999999999995 999999999999886421
Q ss_pred cCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHH-HHHHHHhc-CCc
Q 016076 176 HAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQA-VAFALCME-KNW 253 (395)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~-~~~ 253 (395)
.......|+.+++.++++|+.|.+..|+..++.++......+ ...+.+.. .+...... .+.
T Consensus 138 ----------------~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (281)
T TIGR03340 138 ----------------FAQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGY-LGIGFLAMGWPFLLLYLKRHG 200 (281)
T ss_pred ----------------ccccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 111234688899999999999999988875544321111111 11222111 22222110 001
Q ss_pred ccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhh
Q 016076 254 DQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLY 333 (395)
Q Consensus 254 ~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~ 333 (395)
..+. .....++.+++.+.+++.++|.++++++++.+++.++.+.+++|+++.+++++++||+++..+++|++++++|++
T Consensus 201 ~~~~-~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~ 279 (281)
T TIGR03340 201 RSMF-PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLV 279 (281)
T ss_pred cchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHH
Confidence 1111 112245566778888899999999999999999999999999999999999999999999999999999999987
Q ss_pred e
Q 016076 334 A 334 (395)
Q Consensus 334 l 334 (395)
+
T Consensus 280 l 280 (281)
T TIGR03340 280 V 280 (281)
T ss_pred h
Confidence 5
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=1.8e-25 Score=211.56 Aligned_cols=301 Identities=17% Similarity=0.169 Sum_probs=235.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCcHHHHHHHHHHHhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMS-LRVIIAYRLIFATVLMFPLALILERN-CRSKLNWKILFLGFLSGLFG 89 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 89 (395)
+-.+.+++.=..+++-......+....+.|.+ |...+++.+....++..+...+++.+ ++....+++|+++++.+++.
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~D 89 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLD 89 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHH
Confidence 44555555555566666677777777665555 66667888877777777766555432 33334567888888899999
Q ss_pred hhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccc
Q 016076 90 GSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWST 169 (395)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~ 169 (395)
. .++++.+.|++|++.+.++++.++..+++++++++++|+|+++. |++|++++++|+.++...|....+.
T Consensus 90 v-~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~--- 159 (334)
T PF06027_consen 90 V-EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD--- 159 (334)
T ss_pred H-HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc---
Confidence 6 99999999999999999999999999999999999999999999 5999999999999988754221000
Q ss_pred cccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHh
Q 016076 170 HVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCM 249 (395)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 249 (395)
+....+..+|+++++.++++||+++++.++..++.+ .....++..+++.++..+.....
T Consensus 160 --------------------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~il 218 (334)
T PF06027_consen 160 --------------------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAIL 218 (334)
T ss_pred --------------------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHhe
Confidence 223567789999999999999999999999999876 47788888888888888887776
Q ss_pred cCC-cccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHH
Q 016076 250 EKN-WDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLI 328 (395)
Q Consensus 250 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li 328 (395)
|.+ ....++.. ..........++...-|.+....++..+|+...+-..+..+++++++++++|+++++..++|.++|
T Consensus 219 e~~~i~~~~w~~--~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lI 296 (334)
T PF06027_consen 219 ERSGIESIHWTS--QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALI 296 (334)
T ss_pred ehhhhhccCCCh--hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHH
Confidence 652 22222222 222233333446677888888999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeecCcccccc
Q 016076 329 VCGLYAVLWGKGKEMKN 345 (395)
Q Consensus 329 ~~G~~l~~~~~~~~~~~ 345 (395)
+.|.+++...++++.++
T Consensus 297 iiG~vvy~~~~~~~~~~ 313 (334)
T PF06027_consen 297 IIGFVVYNLAESPEEEA 313 (334)
T ss_pred HHHhheEEccCCccccc
Confidence 99999998876655433
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=1.4e-25 Score=217.21 Aligned_cols=284 Identities=17% Similarity=0.104 Sum_probs=224.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhhccccCCC--cHHHHHHHHHHHhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMS-LRVIIAYRLIFATVLMFPLALILERNCRSKL--NWKILFLGFLSGLFG 89 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 89 (395)
+.+..+++++...+-.......|.+.+. ++ |..++++|++++.+++..+.... .++.++. .++++..++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 5566777777777778888999999996 99 99999999999988766554322 2222333 345788889999999
Q ss_pred hhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccc
Q 016076 90 GSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWST 169 (395)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~ 169 (395)
. ..+...+.|+++++++.++++..+.|+++++++++++|||++++. +.+++++++|+++.+..
T Consensus 125 ~-~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~------~l~l~l~v~Gv~l~~~~---------- 187 (350)
T PTZ00343 125 L-FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYA------YLSLIPIVGGVALASVK---------- 187 (350)
T ss_pred H-HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHheecc----------
Confidence 7 456667799999999999999999999999999999999999995 99999999999998631
Q ss_pred cccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC------CcchHHHHHHHHHHHHHH
Q 016076 170 HVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP------CQYSSTALMCVMGAIQAV 243 (395)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~ 243 (395)
+.+....|++++++++++|++++++.|+..++.+ ++.....+....+.++++
T Consensus 188 ----------------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 245 (350)
T PTZ00343 188 ----------------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISL 245 (350)
T ss_pred ----------------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHH
Confidence 1233467999999999999999999999887642 234455666888998888
Q ss_pred HHHHHhcCC--ccccc----ccchhhHHHHHHHHHhhhhHHHHHHHH----HHhcCCceeeeechhHHHHHHHHHHHHHh
Q 016076 244 AFALCMEKN--WDQWK----LGWNIRLVTVAYSGIVASGFMVTLISW----CVRVKGPLFASVFSPMMLVVVALAASLIL 313 (395)
Q Consensus 244 ~~~~~~~~~--~~~~~----~~~~~~~~~~~~~g~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ 313 (395)
|+....|.. ...+. ......+..+++ .++.+++++.+++. +++++++...++..+++|+++++++++++
T Consensus 246 p~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ 324 (350)
T PTZ00343 246 PLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIF 324 (350)
T ss_pred HHHHHHhhHHHHHHHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHh
Confidence 888755431 11110 000111223334 34456888888884 99999999999999999999999999999
Q ss_pred ccccchhhhhhHHHHhhhhheeeec
Q 016076 314 DEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 314 ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
||++++.+++|++++++|++++.+-
T Consensus 325 ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 325 QTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred CCCCchHhHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999988654
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=1.5e-24 Score=201.75 Aligned_cols=248 Identities=15% Similarity=0.149 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcc-----ccCCCcHHH-HHHHHHHHhh
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERN-----CRSKLNWKI-LFLGFLSGLF 88 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 88 (395)
||++++++++++||.++++.|+ ..+ ++|.+++++|+.++.+++.++...++++ ..++.++++ +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5889999999999999999998 453 9999999999999998877765443321 111122233 4456666766
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWS 168 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~ 168 (395)
. .+++.++++|++++++++++++.++.|+++++++++++|||+++++ +++++++++|+.++...++
T Consensus 80 ~-~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~------~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 I-GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQ------FIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred H-HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------HHHHHHHHHHHHHHHHHcC-------
Confidence 5 5899999999999999999999999999999999999999999995 9999999999998864211
Q ss_pred ccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH
Q 016076 169 THVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALC 248 (395)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (395)
+. ..+++.++++|+.|.+..|+..++ +. .... .......+...+....
T Consensus 146 -----------------------~~------~~~~l~aa~~~a~~~i~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~ 193 (256)
T TIGR00688 146 -----------------------SL------PWEALVLAFSFTAYGLIRKALKNT-DL-AGFC-LETLSLMPVAIYYLLQ 193 (256)
T ss_pred -----------------------Cc------hHHHHHHHHHHHHHHHHHhhcCCC-Cc-chHH-HHHHHHHHHHHHHHHH
Confidence 10 135788999999999999997653 22 2221 1122222222221111
Q ss_pred hcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHH
Q 016076 249 MEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLI 312 (395)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~ 312 (395)
.... ..........|..+++.|++ +.++|.++++++++.++++++++.+++|+++.+++.+.
T Consensus 194 ~~~~-~~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 194 TDFA-TVQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred hccC-cccccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 10111122367888888875 78999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.92 E-value=2.8e-22 Score=188.98 Aligned_cols=283 Identities=26% Similarity=0.327 Sum_probs=216.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
+...+..+.++..+.|+......|...+...++....+.|...+.++..+.... ++.... ...+.+....+.+.+...
T Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 4 ALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLL-EPRGLR-PALRPWLLLLLLALLGLA 81 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHh-hccccc-ccccchHHHHHHHHHHHH
Confidence 456777888888999999999999887743566777777999888874433221 111111 111224556666777777
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHH-HhcccccccccccccccchhHHHHHHHHHHHhhhccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLAT-SIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTH 170 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~-~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~ 170 (395)
.++.+++.++++++++.++++.++.|+++.++++ ++++||+++++ +.+++++++|+.++...++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~------~~~~~~~~~Gv~lv~~~~~~-------- 147 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQ------ILGILLALAGVLLILLGGGG-------- 147 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHH------HHHHHHHHHhHHheecCCCc--------
Confidence 9999999999999999999999999999999997 77799999995 99999999999999853211
Q ss_pred ccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHH-HHHHHHHHHHHHHHHHh
Q 016076 171 VDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTA-LMCVMGAIQAVAFALCM 249 (395)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 249 (395)
.... ...|+++++.++++|+++.+..|+.. +.+ +..... +..........+.. ..
T Consensus 148 --------------------~~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~ 203 (292)
T COG0697 148 --------------------GGIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFF-LS 203 (292)
T ss_pred --------------------chhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHH-hc
Confidence 0111 57899999999999999999999987 433 344444 33331111111111 11
Q ss_pred cCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHh
Q 016076 250 EKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIV 329 (395)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~ 329 (395)
..+ .......+..+.+.|++++++++.++.+++++.++...+.+.+++|+++.+++++++||+++..+++|+++++
T Consensus 204 ~~~----~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~ 279 (292)
T COG0697 204 GFG----APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVV 279 (292)
T ss_pred ccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 111 1223347888899999988899999999999999999999999999999999999999999999999999999
Q ss_pred hhhheeeec
Q 016076 330 CGLYAVLWG 338 (395)
Q Consensus 330 ~G~~l~~~~ 338 (395)
.|+++...+
T Consensus 280 ~g~~l~~~~ 288 (292)
T COG0697 280 LGVLLASLR 288 (292)
T ss_pred HHHHHHhcc
Confidence 999988765
No 14
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.89 E-value=1.9e-21 Score=175.79 Aligned_cols=281 Identities=17% Similarity=0.171 Sum_probs=226.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcccc-C--CCcHHHHHHHHHHHhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCR-S--KLNWKILFLGFLSGLF 88 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~g~~ 88 (395)
+..+|+++.+.+.++||..+...|.... .++.++...|.+-+.+++..+....++.+. . ..+++.+....+.+.+
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 4578999999999999999999997643 999999999999999888777665543221 1 1245667776766666
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWS 168 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~ 168 (395)
- +.++..|.+|..+...-+++.-+++.|++.++++.+++|||+++. |++++.++.+||....+..|.
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~------ 148 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS------ 148 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC------
Confidence 6 499999999999999999999999999999999999999999999 699999999999998874321
Q ss_pred ccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH
Q 016076 169 THVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALC 248 (395)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (395)
.+ ..++.-+++|++|....|+..- ++.+.....+..-.+..+...++
T Consensus 149 ---------------------------lp---wval~la~sf~~Ygl~RK~~~v---~a~~g~~lE~l~l~p~al~yl~~ 195 (293)
T COG2962 149 ---------------------------LP---WVALALALSFGLYGLLRKKLKV---DALTGLTLETLLLLPVALIYLLF 195 (293)
T ss_pred ---------------------------Cc---HHHHHHHHHHHHHHHHHHhcCC---chHHhHHHHHHHHhHHHHHHHHH
Confidence 11 3446778899999998655432 23666666666666666666665
Q ss_pred hcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHH
Q 016076 249 MEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLI 328 (395)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li 328 (395)
.+...+.....+...+..+...|+ .++++..++..+.|+++-+..+.++|.+|..-.+++++++||+++..+++..++|
T Consensus 196 l~~~~~~~~~~~~~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~I 274 (293)
T COG2962 196 LADSGQFLQQNANSLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFI 274 (293)
T ss_pred HhcCchhhhcCCchHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 554332112134456777777787 5789999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeecCcc
Q 016076 329 VCGLYAVLWGKGK 341 (395)
Q Consensus 329 ~~G~~l~~~~~~~ 341 (395)
.+|++++.+..-+
T Consensus 275 W~aL~l~~~d~l~ 287 (293)
T COG2962 275 WLALALFSIDGLY 287 (293)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999776543
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.89 E-value=6.6e-21 Score=167.78 Aligned_cols=275 Identities=18% Similarity=0.151 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 16 PALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 16 g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
++++++.+.+.--.-..+.|..++. +.+.-.+.+|..++.+++.++..-. +.+..++++..++..|+... ..|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~~~~~~~yGvsLg-~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALFRPW----RRRLSKPQRLALLAYGVSLG-GMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHhhHH----HhccChhhhHHHHHHHHHHH-HHHH
Confidence 5777777777766677888989886 9999999999999999988865322 23467899999999999775 8899
Q ss_pred HHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccc
Q 016076 96 LFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLH 175 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~ 175 (395)
+||.|++.+|.+.+..+.++.|+.+++++- +| .++ .+.+.+++.|+.++.- .|
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d------~vwvaLAvlGi~lL~p-~~-------------- 139 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRD------FVWVALAVLGIWLLLP-LG-------------- 139 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhh------HHHHHHHHHHHHhhee-cc--------------
Confidence 999999999999999999999998877653 22 233 6778888899888863 11
Q ss_pred cCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCccc
Q 016076 176 HAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQ 255 (395)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 255 (395)
......+..|..+++.++.||+.|.+..+|..+..+ ..+.+...+..+++..+|+......+
T Consensus 140 --------------~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~--- 201 (292)
T COG5006 140 --------------QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP--- 201 (292)
T ss_pred --------------CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch---
Confidence 234566789999999999999999999999986544 47788888999999999998754321
Q ss_pred ccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 256 WKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 256 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
...++.....-+..+++++.+.|.+-..++++.+....+.+..+||.++.+.+++++||.+|+.||+|+++|+.+..=.
T Consensus 202 -~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 202 -ALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred -hhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 1122335667778899999999999999999999999999999999999999999999999999999999999987766
Q ss_pred eecCccc
Q 016076 336 LWGKGKE 342 (395)
Q Consensus 336 ~~~~~~~ 342 (395)
.+..+|+
T Consensus 281 ~lt~~~~ 287 (292)
T COG5006 281 TLTARKP 287 (292)
T ss_pred ccccCCC
Confidence 6655444
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.87 E-value=5.7e-24 Score=188.05 Aligned_cols=294 Identities=15% Similarity=0.087 Sum_probs=220.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
+..+|+++..++.+.-..+.+..| ..+ .+|.+..-.|+++-.++..|..++++..-+ .+.....+++++|+.|.
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~-~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v~--gp~g~R~~LiLRg~mG~- 108 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTK-VLE--NDPMELASFRLLVRMLITYPCLIYYMQPVI--GPEGKRKWLILRGFMGF- 108 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhh-hhc--cChhHhhhhhhhhehhhhheEEEEEeeeee--cCCCcEEEEEeehhhhh-
Confidence 567888888888444444444444 444 899999999988877777665544433221 12233445678888885
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHV 171 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 171 (395)
.+..+.|||++|.+.+.|.++.+++|+++.+++|.++|||.++.+ .++..+.+.||++++... .+-
T Consensus 109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~e------aL~s~itl~GVVLIvRPp--FlF------ 174 (346)
T KOG4510|consen 109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFE------ALGSLITLLGVVLIVRPP--FLF------ 174 (346)
T ss_pred hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHH------HHHHHHhhheEEEEecCC--ccc------
Confidence 888899999999999999999999999999999999999999997 999999999999997431 000
Q ss_pred cccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcC
Q 016076 172 DLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEK 251 (395)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 251 (395)
.+.+.|.+ .........|.+.++.+.++-|-..++.|++.++.+. .....|..+.+++...+.......
T Consensus 175 ---G~~t~g~~-------~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~-~msvsyf~~i~lV~s~I~~~~ig~ 243 (346)
T KOG4510|consen 175 ---GDTTEGED-------SSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHA-IMSVSYFSLITLVVSLIGCASIGA 243 (346)
T ss_pred ---CCCccccc-------cccccccCCchHHHHHhHhhhhhHHHHHHHhhccccE-EEEehHHHHHHHHHHHHHHhhccc
Confidence 00000000 1112445667888888888888888888999888654 555666666666665555543321
Q ss_pred CcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhh
Q 016076 252 NWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCG 331 (395)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G 331 (395)
-+++ +...+|+.+..+|++ +++++.+...++++..+..+++..+++.+++.++++++|++.|+++.|.|+++++.+
T Consensus 244 --~~lP-~cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS 319 (346)
T KOG4510|consen 244 --VQLP-HCGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSS 319 (346)
T ss_pred --eecC-ccccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehh
Confidence 1121 234578888889985 578999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeecCc
Q 016076 332 LYAVLWGKG 340 (395)
Q Consensus 332 ~~l~~~~~~ 340 (395)
.+.....|.
T Consensus 320 ~v~~a~~kw 328 (346)
T KOG4510|consen 320 TVWVALKKW 328 (346)
T ss_pred HHHHHHHHH
Confidence 888765543
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.87 E-value=2.3e-20 Score=176.31 Aligned_cols=277 Identities=15% Similarity=0.126 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 16 PALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 16 g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
++++.++++++||...+..|... +.++.++. |..++.+++..+....+.. + ...++.+..-++.|.+- ..++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~~-~-~~~~~~~~~g~l~G~~w-~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVLP-E-FWALSIFLVGLLSGAFW-ALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhCC-c-ccccHHHHHHHHHHHHH-Hhhhh
Confidence 57889999999999999999865 57887765 7777777666655443321 1 11244455455555554 58999
Q ss_pred HHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhccccccccccccccc----chhHHHHHHHHHHHhhhccccccccccc
Q 016076 96 LFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAK----LLGTLIGISGAMLLTLYKGVEIKIWSTH 170 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q----~~g~~l~~~Gv~li~~~~g~~~~~~~~~ 170 (395)
+++.|+++++.+.+..+.+ +.+++..+.+.+++||+.+++ | ++|++++++|++++...++++.+
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~----- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG----- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc-----
Confidence 9999999999999999998 999999999999999999888 7 88999999998888643211000
Q ss_pred ccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhc
Q 016076 171 VDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCME 250 (395)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 250 (395)
..+..+..+|++++++++++|+.|.+..|... + +|.+..+.++..-.+..........
T Consensus 144 -------------------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~--~-~~~~~~~~~~~g~~~~~~~~~~~~~ 201 (290)
T TIGR00776 144 -------------------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAFG--V-DGLSVLLPQAIGMVIGGIIFNLGHI 201 (290)
T ss_pred -------------------cccccchhhHHHHHHHHHHHHHHHHHHHHHcC--C-CcceehhHHHHHHHHHHHHHHHHHh
Confidence 00112346799999999999999999998763 4 4577755555422222222221111
Q ss_pred CCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHh-cCCceeeeechhHHHHHHHHHHHHHhccccchhhh----hhH
Q 016076 251 KNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVR-VKGPLFASVFSPMMLVVVALAASLILDEMLHLGSL----LGA 325 (395)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~----~G~ 325 (395)
.+ ..+ .+...+..+..|++ ..+++.++..+.+ +.+++..+.+...+|+.+.+++++++||+.+..++ +|+
T Consensus 202 ~~-~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~ 276 (290)
T TIGR00776 202 LA-KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGI 276 (290)
T ss_pred cc-cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHH
Confidence 10 111 12233344448887 6899999999999 99999999999999999999999999999999999 999
Q ss_pred HHHhhhhheeee
Q 016076 326 TLIVCGLYAVLW 337 (395)
Q Consensus 326 ~li~~G~~l~~~ 337 (395)
++++.|+.+...
T Consensus 277 ~lIi~~~~l~~~ 288 (290)
T TIGR00776 277 ILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHhc
Confidence 999999887643
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.83 E-value=2.3e-18 Score=164.01 Aligned_cols=267 Identities=15% Similarity=0.100 Sum_probs=210.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHH
Q 016076 43 SLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFV 122 (395)
Q Consensus 43 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~l 122 (395)
.|..+++.++.+..++..+.....++++. ++..+..++..+++.. ++..+-+.|++|++.+...++.+..|+.+++
T Consensus 31 ~~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi 106 (303)
T PF08449_consen 31 FPLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLFF-LASVLSNAALKYISYPTQIVFKSSKPIPVMI 106 (303)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHHH-HHHHHHHHHHHhCChHHHHHHhhhHHHHHHH
Confidence 38899999999988877776554442222 3344555566777775 8889999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHH
Q 016076 123 LATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLL 202 (395)
Q Consensus 123 la~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 202 (395)
++.+++|+|.++++ ++++++..+|+.+....+..+.+. + .........|+++
T Consensus 107 ~~~l~~~k~y~~~~------~~~v~li~~Gv~~~~~~~~~~~~~---------~-------------~~~~~~~~~G~~l 158 (303)
T PF08449_consen 107 LGVLILGKRYSRRQ------YLSVLLITIGVAIFTLSDSSSSSS---------S-------------NSSSFSSALGIIL 158 (303)
T ss_pred HHHHhcCccccHHH------HHHHHHHHhhHheeeecccccccc---------c-------------ccccccchhHHHH
Confidence 99999999999994 999999999999987643221000 0 1122223349999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHH--hcCC--cccccccchhhHHHHHHHHHhhhhH
Q 016076 203 ALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALC--MEKN--WDQWKLGWNIRLVTVAYSGIVASGF 277 (395)
Q Consensus 203 ~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~ 277 (395)
.+++.++.|+..+.+++..++++ ++....++....+.+...+.... .++. ........+..+..++...+ +..+
T Consensus 159 l~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~ 237 (303)
T PF08449_consen 159 LLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGAL 237 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHH
Confidence 99999999999999999998776 66789999999999988877777 3221 11122222334445455554 5678
Q ss_pred HHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccc
Q 016076 278 MVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 278 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
++.+.+...++.++...+++..++.+++++++++++|+++++.+|+|.++++.|..++.+.++|+
T Consensus 238 g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 238 GQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 88888889999999999999999999999999999999999999999999999999998877765
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.80 E-value=1.2e-18 Score=161.64 Aligned_cols=300 Identities=16% Similarity=0.177 Sum_probs=229.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHH------HH-hhcccc-----------
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGM--SLRVIIAYRLIFATVLMFPLA------LI-LERNCR----------- 71 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~r~~~~~~~~~~~~------~~-~~~~~~----------- 71 (395)
+...|++++++..++|-.+.-+.+...+++- .|+..+...-....+.+.++. .+ .+|.++
T Consensus 11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~ 90 (416)
T KOG2765|consen 11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA 90 (416)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence 6789999999999999999999999988632 377766665544444444322 11 011000
Q ss_pred ---------------------------C---------------------CCc-H------------HHHHHHHHHHhhhh
Q 016076 72 ---------------------------S---------------------KLN-W------------KILFLGFLSGLFGG 90 (395)
Q Consensus 72 ---------------------------~---------------------~~~-~------------~~~~~~~~~g~~~~ 90 (395)
+ +.+ + +.....+....+.
T Consensus 91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lW- 169 (416)
T KOG2765|consen 91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLW- 169 (416)
T ss_pred hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHH-
Confidence 0 011 1 2344445555566
Q ss_pred hhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccccc
Q 016076 91 SLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTH 170 (395)
Q Consensus 91 ~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~ 170 (395)
.+.++.++.|+.+++++..+++.+++-+|+..++.++..||+++. |++++++.+.|++++...+...
T Consensus 170 F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~s~~------- 236 (416)
T KOG2765|consen 170 FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGDSKQ------- 236 (416)
T ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEeccccc-------
Confidence 499999999999999999999999999999999999999999999 6999999999999998643210
Q ss_pred ccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcch---HHHHHHHHHHHHHHHHHH
Q 016076 171 VDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYS---STALMCVMGAIQAVAFAL 247 (395)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~ 247 (395)
.+ +....+...|+++++.+++.||.|.++.|+-..+.+.-+. ...+..++..+.+.|..+
T Consensus 237 ------------~~-----~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~ 299 (416)
T KOG2765|consen 237 ------------NS-----DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLI 299 (416)
T ss_pred ------------cc-----cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHH
Confidence 00 2345567899999999999999999999998877641122 333444455555555554
Q ss_pred HhcC-CcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHH
Q 016076 248 CMEK-NWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGAT 326 (395)
Q Consensus 248 ~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~ 326 (395)
+... ..+.+..++..+...+++.+++.+.++-++|.+|.-.+++..+++-+.++++.+++.+.++-|.++++.+++|..
T Consensus 300 iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi 379 (416)
T KOG2765|consen 300 ILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSI 379 (416)
T ss_pred HHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHH
Confidence 4322 445566666667788888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhheeeecCccc
Q 016076 327 LIVCGLYAVLWGKGKE 342 (395)
Q Consensus 327 li~~G~~l~~~~~~~~ 342 (395)
.|++|.+..++.....
T Consensus 380 ~Ifv~Fv~vn~~~~~~ 395 (416)
T KOG2765|consen 380 PIFVGFVIVNISSENS 395 (416)
T ss_pred HHHHHHhheecccccc
Confidence 9999999998765433
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.75 E-value=2.5e-18 Score=161.05 Aligned_cols=286 Identities=19% Similarity=0.150 Sum_probs=225.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc-CC-CHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 18 LMMVVVQVAFAGVNIFYKLAAND-GM-SLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 18 l~~l~~~~~~~~~~~~~k~~~~~-~~-~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
++.....++-....+..|+..+. ++ -|..++..+..++.+.++.....+..+..+..++..+..++..|++.. ++..
T Consensus 20 ~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~-~~~v 98 (316)
T KOG1441|consen 20 IAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFC-ISHV 98 (316)
T ss_pred HHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHH-HHHH
Confidence 33444444445556678888873 23 388888887777777777665555444333335577888888888885 9999
Q ss_pred HHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccc
Q 016076 96 LFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLH 175 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~ 175 (395)
+-+.|+.+.+++.+..+..++|++++++++++.+|+.++.. +..++....||.+.+.
T Consensus 99 ~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~------~lsL~piv~GV~ias~----------------- 155 (316)
T KOG1441|consen 99 LGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMT------YLSLLPIVFGVAIASV----------------- 155 (316)
T ss_pred hcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceE------EEEEEEeeeeEEEeee-----------------
Confidence 99999999999999999999999999999999999999997 8999999999998763
Q ss_pred cCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhh--hcC-CcchHHHHHHHHHHHHHH-HHHHHhcC
Q 016076 176 HAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSE--EYP-CQYSSTALMCVMGAIQAV-AFALCMEK 251 (395)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~ 251 (395)
.+...+..|.+.++++.+.++..+++.+++.+ +.. ++.....++..++.+.++ |.....++
T Consensus 156 ---------------~e~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~ 220 (316)
T KOG1441|consen 156 ---------------TELSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEG 220 (316)
T ss_pred ---------------ccccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcc
Confidence 34567789999999999999999999999984 333 679999999999999999 77666555
Q ss_pred Ccc---cccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHH
Q 016076 252 NWD---QWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLI 328 (395)
Q Consensus 252 ~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li 328 (395)
+.. ... ........+.+.. ++....+...+..+.+++|.+.++.+...-++.++.++++|+++.++.+.+|+++.
T Consensus 221 ~~~~~~~~~-~~~~~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~ia 298 (316)
T KOG1441|consen 221 NKFVGFLTA-PWFVTFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIA 298 (316)
T ss_pred cceeeeecc-ccchhhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHH
Confidence 332 110 1111233334444 34455667778899999999999999999999999999999999999999999999
Q ss_pred hhhhheeeecCccccc
Q 016076 329 VCGLYAVLWGKGKEMK 344 (395)
Q Consensus 329 ~~G~~l~~~~~~~~~~ 344 (395)
++|+++|.+.|.++++
T Consensus 299 i~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 299 ILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHHhhhhhc
Confidence 9999999888776544
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=1.3e-16 Score=140.76 Aligned_cols=265 Identities=11% Similarity=0.040 Sum_probs=203.2
Q ss_pred HHHHHHHhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHH
Q 016076 31 NIFYKLAANDGMS-LRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFA 109 (395)
Q Consensus 31 ~~~~k~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a 109 (395)
...+...++.+.+ |...+|..+..-+++..++..+++ +.- ...|..+++.+++.. -++++...|.||++.+.+
T Consensus 34 a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~~~---~~~~~hYilla~~DV-EaNy~vV~AyQyTsmtSi 107 (336)
T KOG2766|consen 34 AFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--KYI---KAKWRHYILLAFVDV-EANYFVVKAYQYTSMTSI 107 (336)
T ss_pred hhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--HHH---HHHHHHhhheeEEee-cccEEEeeehhhcchHHH
Confidence 3334444443344 677799999999999999887654 222 244445788888886 788888999999999999
Q ss_pred HHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCcccccccc
Q 016076 110 SAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQ 189 (395)
Q Consensus 110 ~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (395)
+.+.+-..+.+.+++|+++|.|.++. |+.|+++++.|+.++++.+- .+ .|
T Consensus 108 ~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV----------~a-gd------------- 157 (336)
T KOG2766|consen 108 MLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDV----------HA-GD------------- 157 (336)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeee----------cc-cc-------------
Confidence 99999999999999999999999999 59999999999999986431 00 00
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHH
Q 016076 190 SSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAY 269 (395)
Q Consensus 190 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (395)
..++.+..+|+.+.++++-+||..++..+.+.++.+. ...+....+++++...+-.++..++.....+. ......+.
T Consensus 158 ~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~d~-~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w~--~~i~~yl~ 234 (336)
T KOG2766|consen 158 RAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNADR-VELMGFLGLFGAIISAIQFIFERHHVSTLHWD--SAIFLYLR 234 (336)
T ss_pred ccCCCCCccCcEEEEecceeeeeccccHHHHHhcCcH-HHHHHHHHHHHHHHHHHHHhhhccceeeEeeh--HHHHHHHH
Confidence 3345677889999999999999999999999998765 77888888888888887755443333322221 11222222
Q ss_pred HHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 270 SGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 270 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
..++.++-|.+.-.-+|..+++...+-..++-.++.+. ..||-+.+|...+..+.+..|.+++..
T Consensus 235 -f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 235 -FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred -HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 44566666777777889999999999889999999888 678888999999999999999999843
No 22
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.67 E-value=2e-15 Score=131.75 Aligned_cols=256 Identities=16% Similarity=0.086 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHH
Q 016076 45 RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLA 124 (395)
Q Consensus 45 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla 124 (395)
..++++++.+-.++.=++..++++ .+.++-.-..+..++.-. .+.+...+.|+++.|-....+-.+..|+-+++++
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~---~~~D~t~~~~YaAcs~sY-LlAMVssN~Alq~vpYPTqVlgKScKPIPVMilG 129 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKK---TEIDNTPTKMYAACSASY-LLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILG 129 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeeccc---ccccCCcchHHHHHHHHH-HHHHHhccchhcccCCcHHHhcccCCCcceeeee
Confidence 445566665555554443333322 223333334455555444 5888888999999999999999999999999999
Q ss_pred HHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHHHH
Q 016076 125 TSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLAL 204 (395)
Q Consensus 125 ~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 204 (395)
+++.+++.+|++ ..+++++.+||.+..+..+.. . +.+......|.++.+
T Consensus 130 Vl~~~KsY~w~k------Y~cVL~IV~GValFmYK~~Kv--------------------~-----g~e~~t~g~GElLL~ 178 (337)
T KOG1580|consen 130 VLFAHKSYHWRK------YCCVLMIVVGVALFMYKENKV--------------------G-----GAEDKTFGFGELLLI 178 (337)
T ss_pred hhhhcccccHHH------HHHHHHHHHHHHHhhcccccc--------------------C-----CCcccccchHHHHHH
Confidence 999999999995 999999999999998753321 0 334566788999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCCc--ccccccchhhHHHHHHHHHhhhhHHHHH
Q 016076 205 GSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKNW--DQWKLGWNIRLVTVAYSGIVASGFMVTL 281 (395)
Q Consensus 205 ~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~l 281 (395)
++...-++....+.++...+. ....++++..+.+.+.+....++.++-+ ..+....+..|+-+...++ ++++++.+
T Consensus 179 lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~f 257 (337)
T KOG1580|consen 179 LSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWF 257 (337)
T ss_pred HHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHH
Confidence 999999999999999877654 4467899999999999888887775522 2233334556777778887 77999999
Q ss_pred HHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 282 ISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 282 ~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
.+.-+...+|...+++..+.-.|+++.++++++.+++..||+|.++++.|...-.
T Consensus 258 IF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 258 IFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred HHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999999999999999999999999999999977653
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1e-13 Score=129.27 Aligned_cols=299 Identities=14% Similarity=0.144 Sum_probs=217.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-CC------CcHHHHHH
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDG---MSLRVIIAYRLIFATVLMFPLALILERN---CR-SK------LNWKILFL 81 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~~~~~~---~~-~~------~~~~~~~~ 81 (395)
.-++.+++..+.++...+..|+....+ +.|.+.+++--++-.+++..+.+...++ +. +. ..+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 556778888899999999999987654 6678888877777777776665554321 11 11 14567778
Q ss_pred HHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 016076 82 GFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKG 161 (395)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g 161 (395)
..+.+++.. +.|.+++.++.+.+++..++..++..+.|+++..+++++|++++ ||.++++.+.|+.++.....
T Consensus 95 ~~vPa~iYa-lqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALIYA-LQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHHHH-HhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 888888885 88899999999999999999999999999999999999999999 69999999999999864222
Q ss_pred cccccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHH-HHHHHH
Q 016076 162 VEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALM-CVMGAI 240 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~-~~~~~i 240 (395)
+..+ +.+ ....++...|....+.++++.++..++.+++.|+-+.+..+.-.+ .+++.+
T Consensus 168 ~~~~------------------a~~---~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~ 226 (345)
T KOG2234|consen 168 SPTG------------------AKS---ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGIL 226 (345)
T ss_pred CCCC------------------ccC---CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 1100 000 223567789999999999999999999999998755433333333 344444
Q ss_pred HHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchh
Q 016076 241 QAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLG 320 (395)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~ 320 (395)
+.+...+..+.....|. .....|-...+.-++..+.+-.+....+|+.+-..-.....+..+++.+.++.++|-.||..
T Consensus 227 f~~l~~~~~d~~~i~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~ 305 (345)
T KOG2234|consen 227 FNLLTILLQDGEAINEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLY 305 (345)
T ss_pred HHHHHHhhccccccccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 44444444332111111 11112222233333344455566667788888888888888999999999999999999999
Q ss_pred hhhhHHHHhhhhheeeecCccc
Q 016076 321 SLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 321 ~~~G~~li~~G~~l~~~~~~~~ 342 (395)
..+|+.+++.++.++...+.++
T Consensus 306 F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 306 FLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHHHHHhhcCCccc
Confidence 9999999999999998555443
No 24
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.61 E-value=2.4e-15 Score=119.24 Aligned_cols=135 Identities=20% Similarity=0.257 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccC-CCcHHHHHHHHHHHhhhhhhH
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRS-KLNWKILFLGFLSGLFGGSLS 93 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 93 (395)
...++.++++++|+...++.|...+ ++||...++.|-++..+++..+....++.... ..+.|.|..+.+.|+.+. ++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~-~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~g-ls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLE-GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGG-LS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcc-ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHH-HH
Confidence 4578999999999999999999998 59999999999999999888887766554322 347899999999998775 99
Q ss_pred HHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 94 QNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 94 ~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
+.+||.|++...++.+.++..++|+++++++++++|||++..+ |+|+.+..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~------~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPT------WIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHH------HHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999996 999999999998865
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.60 E-value=7.9e-14 Score=127.89 Aligned_cols=231 Identities=16% Similarity=0.154 Sum_probs=168.8
Q ss_pred cHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 016076 75 NWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAM 154 (395)
Q Consensus 75 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~ 154 (395)
.+++..++.+.+++.. +.+.+.++++++++++.-+++.++..+++++++++++|+|++++ ||+++++.++|++
T Consensus 13 ~~~~~~~~~vPA~lY~-~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYA-IQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 5688888899999885 99999999999999999999999999999999999999999999 6999999999999
Q ss_pred HHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHH
Q 016076 155 LLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTAL 233 (395)
Q Consensus 155 li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~ 233 (395)
++...+....+. ++.+..++ .........|.++.+.++++.++..++.+++.|+.+ +.+.....
T Consensus 86 lv~~~~~~~~~~--~~~~~~~~-------------~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~q 150 (244)
T PF04142_consen 86 LVQLSSSQSSDN--SSSSSVHH-------------DASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQ 150 (244)
T ss_pred eeecCCcccccc--cccccccc-------------ccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 986532211000 00000000 112455688999999999999999999999999865 33444444
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHh
Q 016076 234 MCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLIL 313 (395)
Q Consensus 234 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ 313 (395)
....+.++.++...+.+.... .+......+-...+.-++...++-.+....+|+.+...-+....++.+++.++++++|
T Consensus 151 L~~~gi~~~~~~~~~~~~~~~-~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf 229 (244)
T PF04142_consen 151 LYLFGILFNLLALLLSDGSAI-SESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLF 229 (244)
T ss_pred HHHHHHHHHHHHHhccccccc-ccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555556655555444322100 0001111122222333444555556677789999999999999999999999999999
Q ss_pred ccccchhhhhhHHHH
Q 016076 314 DEMLHLGSLLGATLI 328 (395)
Q Consensus 314 ge~~~~~~~~G~~li 328 (395)
|.+++....+|+.++
T Consensus 230 ~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 230 GFPPSLSFLLGAALV 244 (244)
T ss_pred CCCCchHHhhheecC
Confidence 999999999998653
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.56 E-value=3.4e-13 Score=122.57 Aligned_cols=265 Identities=13% Similarity=0.086 Sum_probs=206.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHH
Q 016076 43 SLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFV 122 (395)
Q Consensus 43 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~l 122 (395)
++..+++.+-+.+.++-..++.+++.+ ...++.|..+...++.+. ++..+-+.|++|++-....+-.+.--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAPLYKYSLISFTNT-LSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCchhHHhHHHHHhh-cchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 466778888888777765544333322 233466667777887775 9999999999999998888888877777799
Q ss_pred HHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHH
Q 016076 123 LATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLL 202 (395)
Q Consensus 123 la~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 202 (395)
+..++.+.|.+..+ .+..+++-.|+.+....+.++ +++ .....+...|+.+
T Consensus 126 mg~Lvy~~ky~~~e------Yl~~~LIs~GvsiF~l~~~s~--------------------s~~---~~g~~ns~~G~~L 176 (327)
T KOG1581|consen 126 MGTLVYGRKYSSFE------YLVAFLISLGVSIFSLFPNSD--------------------SSS---KSGRENSPIGILL 176 (327)
T ss_pred HHHHHhcCccCcHH------HHHHHHHHhheeeEEEecCCC--------------------Ccc---ccCCCCchHhHHH
Confidence 99999999999996 888888889998887643221 000 2344677899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCCc--ccccccchhhHHHHHHHHHhhhhHHH
Q 016076 203 ALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKNW--DQWKLGWNIRLVTVAYSGIVASGFMV 279 (395)
Q Consensus 203 ~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~ 279 (395)
+....++-++.+..+.++.+++. .+..++.+.++++++......+...... ..+-..++..++-++.... ++.+++
T Consensus 177 l~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ 255 (327)
T KOG1581|consen 177 LFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQ 255 (327)
T ss_pred HHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhh
Confidence 99999999999999999998765 6688899999999888776644333221 1222233445555666665 567899
Q ss_pred HHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCcc
Q 016076 280 TLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGK 341 (395)
Q Consensus 280 ~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~ 341 (395)
.+.++-+++.++.+.+.++.+.-+++++++.+++|.+++..||+|..+++.|+.+-.+.++|
T Consensus 256 ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 256 LFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred heehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999988776655
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.54 E-value=1.5e-12 Score=118.36 Aligned_cols=253 Identities=16% Similarity=0.132 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc---cCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHH
Q 016076 44 LRVIIAYRLIFATVLMFPLALILERNC---RSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVT 120 (395)
Q Consensus 44 ~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~ 120 (395)
|..++.++.++-.++........+++. +-..+|++..+-+....+..++-..+.++|++|++.+..++..+..++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 677788887777666555444443322 22457888776555544444578888889999999999999999999999
Q ss_pred HHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHH
Q 016076 121 FVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGS 200 (395)
Q Consensus 121 ~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 200 (395)
.+++.++--||+++.- ..-+.++.+|+.++++. +.+....|.
T Consensus 125 llFs~if~lEk~~w~L------~l~v~lI~~Glflft~K--------------------------------sTqf~i~Gf 166 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWAL------VLIVLLIAVGLFLFTYK--------------------------------STQFNIEGF 166 (349)
T ss_pred HHHHHHHHhHHHHHHH------HHHHHHHhhheeEEEec--------------------------------ccceeehhH
Confidence 9999999999999994 66666677788887752 234566788
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcC----CcchHHHHHHHHHHHHHHHHHHHhcCCccc-----ccccch-hhHHHHHHH
Q 016076 201 LLALGSCFSYALWLIIQAKLSEEYP----CQYSSTALMCVMGAIQAVAFALCMEKNWDQ-----WKLGWN-IRLVTVAYS 270 (395)
Q Consensus 201 ~~~l~a~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~ 270 (395)
.+.+.++++-++.-...+.+.++.+ +|....+.......+.++|..+..|+.... +...+. ..+..+..+
T Consensus 167 ~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i 246 (349)
T KOG1443|consen 167 FLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLI 246 (349)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHH
Confidence 8888888888777777777766544 789999999999999999999988763221 222111 122222222
Q ss_pred HHhhhhHHHHH---HHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 271 GIVASGFMVTL---ISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 271 g~~~~~~~~~l---~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
+. ++..++.+ -+.-+.+++....++.+...-+.+.+++.++.+|.++...|.|..+...|+.++
T Consensus 247 ~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 247 SL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 21 22333322 344578889999999999999999999999999999999999999999999998
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=3.8e-12 Score=117.16 Aligned_cols=290 Identities=12% Similarity=0.086 Sum_probs=218.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCH-HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAAND-GMSL-RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
..+++..+.-++.--.+.+..|..... +++. +...+++...+.+.+...-..+. -..+.++++..+..+...++..
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~l-v~~~~l~~~~~kk~~P~~~lf~- 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGL-VNFRPLDLRTAKKWFPVSLLFV- 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhce-eecCCcChHHHHHHccHHHHHH-
Confidence 344555555555556677888988775 2332 33334788777777666543332 2345578888888888888875
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHV 171 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 171 (395)
+....-..+++|++....+++.+..|+++++...+++|.|+++.. +.++...++|......
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v------~~Sv~~m~~~s~~~~~------------- 149 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKV------WASVFAMIIGSVAAAF------------- 149 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhH------HHHHHHHHHHHHhhcc-------------
Confidence 778888899999999999999999999999999999999999996 8888888777777643
Q ss_pred cccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhc
Q 016076 172 DLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCME 250 (395)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~ 250 (395)
.+......|..+++...++-+.+.+..|+..+..+ +.+.+..+..+.+.+.+.....+++
T Consensus 150 -------------------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~g 210 (314)
T KOG1444|consen 150 -------------------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITG 210 (314)
T ss_pred -------------------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhc
Confidence 23344455999999999999999999999876543 4477899999999998888887765
Q ss_pred C-C---cccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHH
Q 016076 251 K-N---WDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGAT 326 (395)
Q Consensus 251 ~-~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~ 326 (395)
+ + ...-.+.....+..+.+.++.+.++.|. ...+.+..+++..++.+......+.+...+++|++.++...+|..
T Consensus 211 e~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~-s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll 289 (314)
T KOG1444|consen 211 ELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYT-SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLL 289 (314)
T ss_pred chHHHHhhcccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHH
Confidence 4 1 1110111223456666777765555544 668999999999999998888888888888889999999999999
Q ss_pred HHhhhhheeeecCccccc
Q 016076 327 LIVCGLYAVLWGKGKEMK 344 (395)
Q Consensus 327 li~~G~~l~~~~~~~~~~ 344 (395)
+-++|-+++.+.+.++++
T Consensus 290 ~~~~ggv~Y~~~~~~~k~ 307 (314)
T KOG1444|consen 290 VGFFGGVLYSYATFRKKK 307 (314)
T ss_pred HHhhhhhHHhhhhhhhcc
Confidence 999999999887755543
No 29
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.50 E-value=1.5e-13 Score=112.78 Aligned_cols=125 Identities=25% Similarity=0.329 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhcc
Q 016076 25 VAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLT 104 (395)
Q Consensus 25 ~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 104 (395)
++||...++.|...++ .||...+++|+..+.+ +.++....+++.....+++++...+..++++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4689999999999986 9999999999999998 6666666555544567788889999999987679999999999999
Q ss_pred ChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 105 SATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 105 ~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
+++.++++.++.|+++.+++++++||++++++ ++|+++++.|+.++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~------~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQ------IIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999995 999999999999874
No 30
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.50 E-value=1e-12 Score=104.44 Aligned_cols=136 Identities=21% Similarity=0.138 Sum_probs=116.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
..++++++++++++..+..|--.++.+ |...+..+.+...+++........+ ++.....++..|..+...|+ +++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 468999999999999999888888764 6888899998888887777766543 22222235567888888885 78999
Q ss_pred HHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 279 VTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
+.++++|++...++.+..+..++|+++.+++++++||+++..+++|+++|++|+++..+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999988754
No 31
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.31 E-value=4.1e-12 Score=113.65 Aligned_cols=281 Identities=15% Similarity=0.061 Sum_probs=201.1
Q ss_pred HHHHHHhhc---CCC-HHHHHHHHHHHHHHHHHHHHHHhhccc----cC--CCcHHHHHHHHHHHhhhhhhHHHHHHHHh
Q 016076 32 IFYKLAAND---GMS-LRVIIAYRLIFATVLMFPLALILERNC----RS--KLNWKILFLGFLSGLFGGSLSQNLFVESL 101 (395)
Q Consensus 32 ~~~k~~~~~---~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al 101 (395)
...|+.... .+| |..+++.+++....+...+.....+-+ .+ +++.+..+...-..+.-. +...+-++++
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceeh
Confidence 345666542 123 777888888888777666544432211 11 234444445555555442 4445556899
Q ss_pred hccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCC
Q 016076 102 VLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGG 181 (395)
Q Consensus 102 ~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~ 181 (395)
+|.+++...+-.++..+|+.++.++++|+|-+... ..+..+++.|-.+=+- .
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~------~~~C~lIi~GF~lGvd--q-------------------- 175 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFA------LGCCLLIILGFGLGVD--Q-------------------- 175 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhccccccccc------ceeehhheehheeccc--c--------------------
Confidence 99999999999999999999999999999988884 5555555555444221 0
Q ss_pred ccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCCccccc---
Q 016076 182 HVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKNWDQWK--- 257 (395)
Q Consensus 182 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--- 257 (395)
+ ...+.-...|.++++.++++-|+..+..|+...... .-+..+++..+.+.++.+|...+...-...+.
T Consensus 176 --E-----~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~ 248 (347)
T KOG1442|consen 176 --E-----GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPH 248 (347)
T ss_pred --c-----cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCccc
Confidence 0 234566788999999999999999999997765544 44778999999999999999887654111111
Q ss_pred ccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 258 LGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 258 ~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
......|..+...|+++..++|. ..+=+|.++|.+..+-....-....++++.+.+|.-+..-|-|-.++++|...+++
T Consensus 249 l~a~~Fw~~mtLsglfgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 249 LPAIKFWILMTLSGLFGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL 327 (347)
T ss_pred chHHHHHHHHHHHHHHHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence 11233566666666655444443 44557899999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccccc
Q 016076 338 GKGKEMKNVKQL 349 (395)
Q Consensus 338 ~~~~~~~~~~~~ 349 (395)
.|.++++++.++
T Consensus 328 vk~~em~~~~~~ 339 (347)
T KOG1442|consen 328 VKEHEMRKASAQ 339 (347)
T ss_pred HHHHHHHhhccC
Confidence 888776655443
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.31 E-value=3.9e-12 Score=104.24 Aligned_cols=124 Identities=18% Similarity=0.275 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHh
Q 016076 208 FSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVR 287 (395)
Q Consensus 208 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~ 287 (395)
++||.+.+..|+..++.+ |....++++..+.+ ..+...+..... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 468899999999998865 68999999999998 666665554322 22333446777888888888999999999999
Q ss_pred cCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 288 VKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 288 ~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
+.+++.++++.+++|+++.++++++++|++++.+++|+.++++|+++.
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998765
No 33
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.29 E-value=8.6e-10 Score=101.12 Aligned_cols=252 Identities=19% Similarity=0.145 Sum_probs=177.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCc--HHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhh-hhHH
Q 016076 42 MSLRVIIAYRLIFATVLMFPLALILERNCRSKLN--WKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFN-LIPA 118 (395)
Q Consensus 42 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi 118 (395)
-+|.+.++---+-+.++-+...++. + +..+ .+.+...++.|++-. +++...+.|.++.+.+.+.++.. ++-+
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~~-~---p~~~~~~~~~~~~~lsG~~W~-iGq~~qf~s~~~~GVS~tmPiStg~QLv 84 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLFR-Q---PAFSMSGTSFIVAFLSGAFWA-IGQIGQFKSFKKIGVSKTMPISTGLQLV 84 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHh-C---CCcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcceeeeccchhHHHH
Confidence 4555544444444444444333332 2 2343 488888888888885 99999999999999999999996 8888
Q ss_pred HHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchh
Q 016076 119 VTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLL 198 (395)
Q Consensus 119 ~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (395)
.+.++++++++|.-+...+ ..-.+++++.++|+.+..+.+.++.+ .++..+..+
T Consensus 85 g~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~~~~~~~~------------------------~~~~~~~~k 138 (269)
T PF06800_consen 85 GTSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSYQDKKSDK------------------------SSSKSNMKK 138 (269)
T ss_pred HHHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhccccccccc------------------------cccccchhh
Confidence 8999999999999887750 11134677788888888764332100 123456678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
|.+..+++.+.|..|.+..|... . +++....-+.+.-.+...++.....+ ..++. .-+.-+..|++ -.++
T Consensus 139 gi~~Ll~stigy~~Y~~~~~~~~--~-~~~~~~lPqaiGm~i~a~i~~~~~~~--~~~~k----~~~~nil~G~~-w~ig 208 (269)
T PF06800_consen 139 GILALLISTIGYWIYSVIPKAFH--V-SGWSAFLPQAIGMLIGAFIFNLFSKK--PFFEK----KSWKNILTGLI-WGIG 208 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--C-ChhHhHHHHHHHHHHHHHHHhhcccc--ccccc----chHHhhHHHHH-HHHH
Confidence 99999999999999999966532 2 45666666666555555555544321 11111 22333445553 4678
Q ss_pred HHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhh----hhhHHHHhhhhhe
Q 016076 279 VTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGS----LLGATLIVCGLYA 334 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~----~~G~~li~~G~~l 334 (395)
..++..+.+..+.+..=.+..+.++++.+.+.+++||+=+..+ ++|.++++.|.++
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 8889999999999999999999999999999999999887654 5788888888664
No 34
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.25 E-value=3.8e-11 Score=104.38 Aligned_cols=278 Identities=14% Similarity=0.086 Sum_probs=193.5
Q ss_pred HHHHHHHHhhc-CCC-HHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChh
Q 016076 30 VNIFYKLAAND-GMS-LRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSAT 107 (395)
Q Consensus 30 ~~~~~k~~~~~-~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 107 (395)
+.+..|+..+. |++ -+.+.+.+.+.+.+-+..+-..+..+. +..+.+.| +..+++.. ...+.--.+++|++..
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f-R~t~aK~W---fpiSfLLv-~MIyt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF-RLTKAKKW---FPISFLLV-VMIYTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe-ehhhhhhh---cCHHHHHH-HHHHhcccceeeeeee
Confidence 44556766553 333 355667777776665555433322221 12222333 44444443 4444555799999999
Q ss_pred HHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCcccccc
Q 016076 108 FASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVP 187 (395)
Q Consensus 108 ~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (395)
..+++.++..+.++....++++.|.+-.+ +...++.++.-+...+.+.+. +
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vtsl~------l~SFilMvlSS~va~w~D~q~----------------------~- 146 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTSLE------LLSFILMVLSSVVATWGDQQA----------------------S- 146 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccchhh------HHHHHHHHHHHHHhccchhhH----------------------H-
Confidence 99999999999999999999999999987 777777766666655532211 1
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCCccc--ccccchhhH
Q 016076 188 LQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKNWDQ--WKLGWNIRL 264 (395)
Q Consensus 188 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~ 264 (395)
.-..+....|.+++...++.-+.+....|+..+-.+ .-...++|..+.+.+.++....+.|+-.+. ....+...+
T Consensus 147 --~~~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l 224 (309)
T COG5070 147 --AFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSL 224 (309)
T ss_pred --HHHhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHH
Confidence 122345667999999999999999999888765322 227789999999999999888887641111 111122345
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccccc
Q 016076 265 VTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKEMK 344 (395)
Q Consensus 265 ~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~~~ 344 (395)
.++...|+.+ ..-..+..++++.++.+..++++.+.-.-..+.|.++|||+.+...+....+-..+.+++...+.++++
T Consensus 225 ~am~ISgl~s-vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q 303 (309)
T COG5070 225 MAMFISGLCS-VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ 303 (309)
T ss_pred HHHHHHHHHH-hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667777744 444455778999999999999999999999999999999999999999988877776666666555433
No 35
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.24 E-value=6.6e-09 Score=99.01 Aligned_cols=301 Identities=13% Similarity=0.051 Sum_probs=183.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhh-c---cccCCCcHHHHHHHHHHHh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILE-R---NCRSKLNWKILFLGFLSGL 87 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~g~ 87 (395)
+...|++.++++.++||...+-.|. .++ .+-..+=..-.+++.+++....-... + ....+.+.+.+...++.|+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~ 81 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGA 81 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHH
Confidence 4678999999999999999999998 332 44222100111122222111101110 1 1123356788888888888
Q ss_pred hhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhccccc---ccccccccccchhHHHHHHHHHHHhhhcccc
Q 016076 88 FGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKL---GIRTRAGKAKLLGTLIGISGAMLLTLYKGVE 163 (395)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~---~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~ 163 (395)
+-. +++..++.++++...+.+..+.. +.-+...++..++++|-. +.. .+..-++|+++.++|+.+...-....
T Consensus 82 ~W~-iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~--~g~~~~~gv~liliGi~l~s~Ag~~k 158 (345)
T PRK13499 82 LWG-IGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATN--GGRMTLLGVLVALIGVAIVGRAGQLK 158 (345)
T ss_pred HHH-hhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccc--hHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 885 99999999999999999999886 999999999999999764 222 12224788888999999987622111
Q ss_pred cccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHH-------HHHHHhhhhcCCcchHHHHHHH
Q 016076 164 IKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWL-------IIQAKLSEEYPCQYSSTALMCV 236 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~ 236 (395)
.+. .+ + + ..+..+..+|+++++++++.++.|. ...+...+..-++......+..
T Consensus 159 ~~~----~~---~-~-----------~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~ 219 (345)
T PRK13499 159 ERK----MG---I-K-----------KAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYV 219 (345)
T ss_pred ccc----cc---c-c-----------cccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHH
Confidence 000 00 0 0 0234677899999999999999999 4433321111133333333333
Q ss_pred ---HHHHHHHHH-HHH---hcCCcccccc--cc----hhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeee---ch-h
Q 016076 237 ---MGAIQAVAF-ALC---MEKNWDQWKL--GW----NIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASV---FS-P 299 (395)
Q Consensus 237 ---~~~i~~~~~-~~~---~~~~~~~~~~--~~----~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~---~~-~ 299 (395)
.+.+..... ..+ .+++...... .+ ......-...|+ .-.+++.++..+....+...... +. .
T Consensus 220 ~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~ 298 (345)
T PRK13499 220 VIMGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMS 298 (345)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhcc
Confidence 333322221 111 1122111111 11 112222244454 34677777888877776554444 43 7
Q ss_pred HHHHHHHHHHHHHhccccc------hhhhhhHHHHhhhhheeeec
Q 016076 300 MMLVVVALAASLILDEMLH------LGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 300 ~~pv~a~i~~~l~~ge~~~------~~~~~G~~li~~G~~l~~~~ 338 (395)
+..+++.+++. +++|.=+ ..-++|.+++++|.++...+
T Consensus 299 ~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 299 FYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 78899999997 5999766 55689999999998876554
No 36
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.23 E-value=2.1e-10 Score=103.12 Aligned_cols=280 Identities=14% Similarity=0.061 Sum_probs=193.3
Q ss_pred HHHHHHHHHHhh---cCCC----HHHHHHHHHHHHHHHHHHHHHHhhccccCCC------------cHHHHHHHHHHHhh
Q 016076 28 AGVNIFYKLAAN---DGMS----LRVIIAYRLIFATVLMFPLALILERNCRSKL------------NWKILFLGFLSGLF 88 (395)
Q Consensus 28 ~~~~~~~k~~~~---~~~~----~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~g~~ 88 (395)
+.+.+.+|++-+ +|.+ |+..+..-++--+++++.+.+++.+...+.. ++-+-...+...++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~ 95 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC 95 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence 345667777633 2333 5555555555555667777676655433211 01112233446666
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWS 168 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~ 168 (395)
.. .+..+.|.++.+++++.-+++.....+|+.+++.-+++.+++.+ ||+|+....+|++.+...+- ..+
T Consensus 96 Di-~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~d~-~~~--- 164 (372)
T KOG3912|consen 96 DI-AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSLDV-HLV--- 164 (372)
T ss_pred HH-hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeeeec-ccc---
Confidence 75 78888999999999999999999999999999999999999999 69999999999998864210 000
Q ss_pred ccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHH
Q 016076 169 THVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFAL 247 (395)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~ 247 (395)
+++ ..+..+...|+++.+++=+.-|+..++.+|..++++ +|.....|..+++.+.+..++.
T Consensus 165 ---------------~~p---~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i 226 (372)
T KOG3912|consen 165 ---------------TDP---YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAI 226 (372)
T ss_pred ---------------cCC---ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHH
Confidence 000 344567788999999999999999999999988877 8899999999999776665555
Q ss_pred HhcC-----Cc-----ccccc-------cchhhHHHHHHHHHhhhhHHH-HHHHHHHhcCCceeeeechhHHHHHHHHHH
Q 016076 248 CMEK-----NW-----DQWKL-------GWNIRLVTVAYSGIVASGFMV-TLISWCVRVKGPLFASVFSPMMLVVVALAA 309 (395)
Q Consensus 248 ~~~~-----~~-----~~~~~-------~~~~~~~~~~~~g~~~~~~~~-~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~ 309 (395)
.... .+ ..|.. ........+...|...+..-| +.-....|..+++.-.++-.+.-.+-.+++
T Consensus 227 ~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~s 306 (372)
T KOG3912|consen 227 PMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFS 306 (372)
T ss_pred HHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhH
Confidence 4311 11 00110 000011223333333322111 111233577788888888999999999999
Q ss_pred HHHhccccchhhhhhHHHHhhhhheee
Q 016076 310 SLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 310 ~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
.....|.++..|+.|.++.+.|++++.
T Consensus 307 i~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 307 IAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999884
No 37
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.23 E-value=2.5e-10 Score=106.12 Aligned_cols=134 Identities=22% Similarity=0.255 Sum_probs=113.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMS--LRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFG 89 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (395)
...+|.+++++++++|+...+..|...++ .+ +.....+++.++.+++.++....++. ...+++++...+..++++
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 201 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIG 201 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHH
Confidence 34689999999999999999999998764 66 44555578899888888876654332 233667787788888888
Q ss_pred hhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 016076 90 GSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAM 154 (395)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~ 154 (395)
..+++.++++++++.+++.++++.++.|+++.++++++++|++++.+ ++|..+.+.|++
T Consensus 202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~------~~G~~li~~g~~ 260 (260)
T TIGR00950 202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQ------LIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHhcC
Confidence 77999999999999999999999999999999999999999999995 999999998863
No 38
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.20 E-value=3.4e-11 Score=107.98 Aligned_cols=264 Identities=12% Similarity=0.015 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhc-cChhHHHHhhhhhHHHHHHH
Q 016076 45 RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVL-TSATFASAMFNLIPAVTFVL 123 (395)
Q Consensus 45 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~a~~i~~~~Pi~~~ll 123 (395)
-.++|.++++.+.--+++.- +-...+++++.+++...+..=+. .+.+-++++++ ++...-.++.+-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~s-kf~~~k~kiplk~Y~i~V~mFF~----vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTS-KFFTVKPKIPLKDYAITVAMFFI----VNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeec-cccccCCCCchhhhheehheeee----eeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 55677777766655444331 11222366788888765544333 34444577776 67777888889999999999
Q ss_pred HHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHHH
Q 016076 124 ATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLA 203 (395)
Q Consensus 124 a~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 203 (395)
++++.|+|.+.+ |..++++..+|+++..+.+..+.+. ..+.. ++.+ + ..+......|+.+.
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l-~~~~-----~-----~~~~~~w~iGi~lL 169 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KLSGL-DSGS-----A-----QSDFFWWLIGIALL 169 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hhccc-ccCc-----c-----cccchHHHHHHHHH
Confidence 999999999999 6999999999999987754433222 01111 0100 0 22344567899999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCC-----------cccccccchhhHHHHHHHH
Q 016076 204 LGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKN-----------WDQWKLGWNIRLVTVAYSG 271 (395)
Q Consensus 204 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g 271 (395)
.++.+.-|.-.+.++..-++++ ++-+..+|....+.+..+...--.... .+.....-+..|+.++
T Consensus 170 ~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl--- 246 (330)
T KOG1583|consen 170 VFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL--- 246 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH---
Confidence 9999999999999999988887 778899999888776655443111000 0001111223444432
Q ss_pred HhhhhHHHHHHHHHH----hcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 272 IVASGFMVTLISWCV----RVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~----~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
+..+.+.+...++ ...++.++++...+.-.++.+++.+.|+.++++.-|+|+.++.+|.+++..
T Consensus 247 --~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 247 --FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred --HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444 455778899999999999999999999999999999999999999888843
No 39
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.18 E-value=9e-10 Score=98.63 Aligned_cols=278 Identities=13% Similarity=0.128 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHhhc-CCCH--HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHh
Q 016076 25 VAFAGVNIFYKLAAND-GMSL--RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESL 101 (395)
Q Consensus 25 ~~~~~~~~~~k~~~~~-~~~~--~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 101 (395)
+++-....+-.+..+. |+.| +.+++.++.+-..+.+..... .+.+++..+|+.+. .++++.. ....+-.-++
T Consensus 53 f~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~-~~~k~r~iP~rtY~---~la~~t~-gtmGLsn~Sl 127 (367)
T KOG1582|consen 53 FLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQL-IQTKRRVIPWRTYV---ILAFLTV-GTMGLSNGSL 127 (367)
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEe-ecccceecchhHhh---hhHhhhh-hccccCcCcc
Confidence 3444445555554442 5664 567777765543333322111 12223334566554 4444443 5666667899
Q ss_pred hccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCC
Q 016076 102 VLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGG 181 (395)
Q Consensus 102 ~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~ 181 (395)
.|++-..-.++.+..-+-+++.+.++-+.|.++.+ .++..+..+|.++....|.
T Consensus 128 gYLNYPtQviFKccKliPVmiggifIqGkRY~v~d------~~aA~lm~lGli~FTLADs-------------------- 181 (367)
T KOG1582|consen 128 GYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHD------YIAAMLMSLGLIWFTLADS-------------------- 181 (367)
T ss_pred ccccCcHHHHHHhhhhhhhhheeeeeccccccHHH------HHHHHHHHHHHHhhhhccc--------------------
Confidence 99988888888887777778999999999999997 9999999999999887442
Q ss_pred ccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC-CcchHHHHHHHHHHHHHHHHHHHhcCCcccccc--
Q 016076 182 HVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP-CQYSSTALMCVMGAIQAVAFALCMEKNWDQWKL-- 258 (395)
Q Consensus 182 ~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 258 (395)
...++....|.+..-++.++-|+---++++..+.++ +...+.++....+.+.++.......+-++.|..
T Consensus 182 --------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fca 253 (367)
T KOG1582|consen 182 --------QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCA 253 (367)
T ss_pred --------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHH
Confidence 335567788999999999999998888899888776 346788889999999988888887664444432
Q ss_pred -cchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 259 -GWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 259 -~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
++.+.....++.+. .+.++......-++..++..++.++...-.+++++++++|..++|....-|..+++.|+++-.+
T Consensus 254 ehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 254 EHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY 332 (367)
T ss_pred hCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence 22223333333333 4566777777778889999999999999999999999999999999999999999999999988
Q ss_pred cCccc
Q 016076 338 GKGKE 342 (395)
Q Consensus 338 ~~~~~ 342 (395)
.++.+
T Consensus 333 sk~nk 337 (367)
T KOG1582|consen 333 SKRNK 337 (367)
T ss_pred cCCCC
Confidence 87443
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.16 E-value=1.9e-10 Score=93.09 Aligned_cols=104 Identities=27% Similarity=0.377 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHHHHHhhccc--cCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHH
Q 016076 49 AYRLIFATVLMFPLALILERNC--RSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATS 126 (395)
Q Consensus 49 ~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~ 126 (395)
.+|+.++.+++..+...+++.+ .+..+++.+......|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5788999988888877754321 22234455667777788886689999999999999 58889999999999999999
Q ss_pred hcccccccccccccccchhHHHHHHHHHHHhhh
Q 016076 127 IGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLY 159 (395)
Q Consensus 127 ~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~ 159 (395)
++|||+++++ ++++.++++|++++.+.
T Consensus 81 ~~~er~~~~~------~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 81 FFKERLSPRR------WLAILLILIGVILIAWS 107 (113)
T ss_pred HhcCCCCHHH------HHHHHHHHHHHHHHhhh
Confidence 9999999995 99999999999999874
No 41
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.10 E-value=4.4e-10 Score=96.06 Aligned_cols=216 Identities=16% Similarity=0.175 Sum_probs=157.9
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccccccc
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKI 166 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~ 166 (395)
++. ...++.|..|++.++++.++.++.....|+.+++++++++|+...+ +++.++++.|++++.+-+
T Consensus 61 i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~k------IlaailAI~GiVmiay~D------ 127 (290)
T KOG4314|consen 61 IFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFK------ILAAILAIGGIVMIAYAD------ 127 (290)
T ss_pred EEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhh------HHHHHHHhCcEEEEEecc------
Confidence 344 4889999999999999999999999999999999999999999995 999999999999998632
Q ss_pred ccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHH----HH
Q 016076 167 WSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAI----QA 242 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i----~~ 242 (395)
........|+.+++++++..|+|-+..|+.....+- -....++...+.. ..
T Consensus 128 ------------------------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~-Gdaa~FmS~LGF~NL~~~~ 182 (290)
T KOG4314|consen 128 ------------------------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANF-GDAAHFMSCLGFFNLCFIS 182 (290)
T ss_pred ------------------------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcc-hhHHHHHHHHHHHHHHHHh
Confidence 234456789999999999999999999998765431 1112222211111 11
Q ss_pred HHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhh
Q 016076 243 VAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSL 322 (395)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~ 322 (395)
.+.........++|..-....|..+...+.+..+ -..+.+.++..+.|...++-+.....-....+.++-+-..+...+
T Consensus 183 ~~~lIL~~T~VE~~qsFA~~PWG~l~G~A~L~lA-FN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~L 261 (290)
T KOG4314|consen 183 FPALILAFTGVEHLQSFAAAPWGCLCGAAGLSLA-FNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFL 261 (290)
T ss_pred hhHHHHHHhchHHHHHHhhCCchhhhhHHHHHHH-HhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHH
Confidence 1111111112222322122246666666654433 335567788999999999999999999999997776777889999
Q ss_pred hhHHHHhhhhheeeecCcc
Q 016076 323 LGATLIVCGLYAVLWGKGK 341 (395)
Q Consensus 323 ~G~~li~~G~~l~~~~~~~ 341 (395)
.|.++|..|.++......|
T Consensus 262 a~T~iI~i~FiLiiiP~d~ 280 (290)
T KOG4314|consen 262 AATCIICIGFILIIIPEDK 280 (290)
T ss_pred HHHHHHHHhHHheecccch
Confidence 9999999999888776544
No 42
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.09 E-value=1.4e-09 Score=92.73 Aligned_cols=138 Identities=17% Similarity=0.149 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhc------CCcchHHHHHHHHHHHHHHHHHHHhcCCccc-----ccc---c-chhh
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEY------PCQYSSTALMCVMGAIQAVAFALCMEKNWDQ-----WKL---G-WNIR 263 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~---~-~~~~ 263 (395)
|.++++.+.++.+++.++.|+..++. .++..+..+....+.+.+.+.....|..... ... . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999988772 3778999999999999999998887653211 100 0 2234
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 264 LVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 264 ~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
+..++..|++ ....+...+..+++++|...+++..+..++..+++++++||+++..++.|+++.++|.+++.|
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555555554 456777788899999999999999999999999999999999999999999999999998865
No 43
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.07 E-value=5.5e-09 Score=99.05 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
...|.++.++++++|+...+..|...++ .++.... +...++.+++.++...... ....++..+...+..|++...+
T Consensus 146 ~~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 146 DLTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999999999999988764 7777764 4445666666666554322 1223456666667888888889
Q ss_pred HHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 016076 93 SQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLY 159 (395)
Q Consensus 93 ~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~ 159 (395)
++.++++++++.+++.++++.+++|+++.++++++++|+++.. |++|..++++|++.....
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999 599999999999998763
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.04 E-value=7.1e-09 Score=98.28 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=114.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
...|.++.++++++|+...+..|.... -++...+++++.++.+.+.++............+...|..++..++++..+
T Consensus 148 ~~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 148 NPWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 357999999999999999999998643 234556778888888877776654332211123567888888889988789
Q ss_pred HHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 93 SQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 93 ~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
++.+|++++++.+++.++++..+.|++++++++++++|+++..+ ++|.++.+.|+.++..
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~------iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIE------WLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHH------HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 9999999999999865
No 45
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.02 E-value=1.1e-08 Score=99.27 Aligned_cols=140 Identities=10% Similarity=0.081 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCH-HHHHHHHHHHHHHHHHHHHHHhhcccc----CCCcHHHHHHHHHHHhh
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAANDGMSL-RVIIAYRLIFATVLMFPLALILERNCR----SKLNWKILFLGFLSGLF 88 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~ 88 (395)
..|.+++++++++|+...++.|..... +++ ...+++...++.+.+.+......+... ...+.. ...++..++.
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~ 265 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH
Confidence 458899999999999999999987765 654 466677777666666555554332211 112222 2224444544
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhccc
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGV 162 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~ 162 (395)
. .+++.++++++++.+++.++++.++.|++++++++++++|++++.. ++|.++++.|+.++.+.+..
T Consensus 266 t-~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~------~iG~~LIl~Gv~l~~~~~~~ 332 (358)
T PLN00411 266 T-SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGC------LIGGILITLGFYAVMWGKAN 332 (358)
T ss_pred H-HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHHhhhhh
Confidence 4 4789999999999999999999999999999999999999999995 99999999999998864433
No 46
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.02 E-value=3e-08 Score=93.82 Aligned_cols=281 Identities=16% Similarity=0.162 Sum_probs=154.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
+...|+++.++++++-+....+-|....+ .+. .-.|. ..+.++..++ ...+.|++.+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~---~~~~~--------------~~~~~~~l~~----~~W~~G~~~~~ 61 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR---GSLRA--------------GSGGRSYLRR----PLWWIGLLLMV 61 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc---ccccc--------------cchhhHHHhh----HHHHHHHHHHh
Confidence 46789999999999999999988877543 111 00000 0000011111 22344555555
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHV 171 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 171 (395)
++..+-+.|+.+.|.+..+++..+.-++.++++..++|||+++++ ++|..++++|..+++.. +++.+...+..
T Consensus 62 ~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~------~~G~~l~i~G~~liv~~-~~~~~~~~t~~ 134 (300)
T PF05653_consen 62 LGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRD------IVGCALIILGSVLIVIF-APKEEPIHTLD 134 (300)
T ss_pred cchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhH------HhhHHHHHhhheeeEEe-CCCCCCcCCHH
Confidence 777888899999999999999999999999999999999999997 99999999999887653 22211100000
Q ss_pred cccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHH---HH-H
Q 016076 172 DLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVA---FA-L 247 (395)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~-~ 247 (395)
+.. ..-.+......+..... +...+.....+|..++ +.........+.++...+. +. .
T Consensus 135 ~l~---------------~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~ 196 (300)
T PF05653_consen 135 ELI---------------ALLSQPGFLVYFILVLV-LILILIFFIKPRYGRR--NILVYISICSLIGSFTVLSAKAISIL 196 (300)
T ss_pred HHH---------------HHhcCcceehhHHHHHH-HHHHHHHhhcchhccc--ceEEEEEEeccccchhhhHHHHHHHH
Confidence 000 00001111112112221 1122222222222221 1111111111111111110 11 0
Q ss_pred Hhc--CCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHH-HHHHHHHHHHhcccc--ch---
Q 016076 248 CME--KNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMML-VVVALAASLILDEML--HL--- 319 (395)
Q Consensus 248 ~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~p-v~a~i~~~l~~ge~~--~~--- 319 (395)
+.. .+..++ .++..|..++.. +.+........++|+++.+++.+..+.+..- .++.+-|.++++|.. +.
T Consensus 197 i~~~~~g~~~f--~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~ 273 (300)
T PF05653_consen 197 IKLTFSGDNQF--TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQI 273 (300)
T ss_pred HHHHhcCchhh--hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHH
Confidence 000 111111 222233333333 3344556677789999999999988877665 455566666788754 33
Q ss_pred -hhhhhHHHHhhhhheeeecCccc
Q 016076 320 -GSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 320 -~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
....|..+++.|+++....|.++
T Consensus 274 ~~~~~G~~~ii~GV~lL~~~~~~~ 297 (300)
T PF05653_consen 274 IGFLCGFLIIIIGVFLLSSSKDKE 297 (300)
T ss_pred HHHHHHHHHHHHhhheeeccCchh
Confidence 34577888999999886655443
No 47
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.95 E-value=6.6e-09 Score=98.69 Aligned_cols=139 Identities=18% Similarity=0.151 Sum_probs=110.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCccccc--ccchhhHHHHHHHH
Q 016076 194 GKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWK--LGWNIRLVTVAYSG 271 (395)
Q Consensus 194 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g 271 (395)
.+..+|.+++++++++|+...+..|.. .+. +|....++++.++.+++.+......+ ..... ...+..+. ....+
T Consensus 4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 79 (296)
T PRK15430 4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICRQ-WSYLKTLIQTPQKIF-MLAVS 79 (296)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHcc-HHHHHHHHcCHHHHH-HHHHH
Confidence 456789999999999999999999765 455 46899999999998877766544321 11110 01122222 33355
Q ss_pred HhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 272 IVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
.+..+..+.++++++++.+++.++++.++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999999999999999999999999999999999999988765
No 48
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.93 E-value=1.3e-08 Score=95.99 Aligned_cols=133 Identities=16% Similarity=0.079 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHH
Q 016076 200 SLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMV 279 (395)
Q Consensus 200 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 279 (395)
.++.++++++|+..+++.|+..++.+. ..++.+...++...+....... ...|...+. .++.....+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPD---FLWWALLAHSVLLTPYGLWYLA-QVGWSRLPA-TFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhH---HHHHHHHHHHHHHHHHHHHhcc-cCCCCCcch-hhHHHHHHHHHHHHHHH
Confidence 567899999999999999988776322 3466666666666666554311 122332222 33334444544667888
Q ss_pred HHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 280 TLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 280 ~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
.++++++++.+++.++++.+++|+++.++++++++|+++..+++|.+++++|+++...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999999999887754
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.92 E-value=3.1e-08 Score=94.07 Aligned_cols=133 Identities=10% Similarity=0.048 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhH
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLS 93 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 93 (395)
..|.+++++++++|+...++.|...++ .++....+ ....+++.+...... ......++..+..++..++. ..++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence 458999999999999999999998664 77765433 222333333222222 11223566777777777754 4589
Q ss_pred HHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 94 QNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 94 ~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
+.++++++++.+++.++++.++.|++..++++++++|+++... ++|.++++.|+.+...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~------~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSF------WQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999994 9999999999988754
No 50
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.88 E-value=1.2e-08 Score=92.70 Aligned_cols=214 Identities=13% Similarity=0.094 Sum_probs=130.4
Q ss_pred ChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccc--cccccccccCCCCCc
Q 016076 105 SATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIW--STHVDLLHHAGGGGH 182 (395)
Q Consensus 105 ~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~--~~~~~~~~~~~~~~~ 182 (395)
+......+.+..++++++..+.+.++|.+.. |+++.++...|+....+.+.+..... .......+..+ +.+
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~-~~~ 75 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQ-SSA 75 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCC-CCc
Confidence 3445566778889999999999999999866 69999999999886544322110000 00000000000 000
Q ss_pred cccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHH-HHHHHHHHHHHHHHHhcCCc-cccc--c
Q 016076 183 VASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTAL-MCVMGAIQAVAFALCMEKNW-DQWK--L 258 (395)
Q Consensus 183 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~-~~~~--~ 258 (395)
. .........|....+.++++-++..++.++..++.+........ ....+.+...........+. ..+. .
T Consensus 76 ~------~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (222)
T TIGR00803 76 K------TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI 149 (222)
T ss_pred c------ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence 0 11223556788888888888888999988887664321111111 11222221111111111110 1111 1
Q ss_pred cchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 259 GWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 259 ~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
..+...+. -++....+..+....+|+.++...+....++++++.+++++++|++++..+++|+.+++.|++++
T Consensus 150 ~~~~~~~~----~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 150 GYPTAVWI----VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred CCchHHHH----HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 11111121 22345567777889999999999999999999999999999999999999999999999998764
No 51
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.87 E-value=1.8e-08 Score=93.55 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=106.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCc---ccccccchhh-HHHHHHHHHh
Q 016076 198 LGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNW---DQWKLGWNIR-LVTVAYSGIV 273 (395)
Q Consensus 198 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~g~~ 273 (395)
+|.++.++++++|+...+..|.+ .+. +|.+..+++++.+.+.+.+......+.. ..++...... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-ccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 48899999999999999999974 445 5699999999999887766554432110 1111111112 3344555554
Q ss_pred hhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 274 ASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
.+..+.++++++++++++.++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999988764
No 52
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.84 E-value=1.4e-07 Score=89.71 Aligned_cols=138 Identities=14% Similarity=0.199 Sum_probs=107.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---HHHHHHHHHHHHHHHHHHHHHHhhcc-----ccCCCcHHHHHHHHHH
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAANDGMS---LRVIIAYRLIFATVLMFPLALILERN-----CRSKLNWKILFLGFLS 85 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 85 (395)
..|.+++++++++|+...++.|...+. .+ .....++-...+.+.+.......... .+...++..|..++..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 479999999999999999999987543 32 23333444444433333322222211 1123467888888999
Q ss_pred HhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 86 GLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
+++...+.+.++++++++.+++.++.+..+.|++..++++++++|+++... ++|..++++|+.+..+
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~------~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQ------FLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHH------HHHHHHHHHHHHHHhc
Confidence 999988999999999999999999999999999999999999999999994 9999999999998765
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.77 E-value=1e-07 Score=78.53 Aligned_cols=123 Identities=19% Similarity=0.130 Sum_probs=94.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhH
Q 016076 198 LGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGF 277 (395)
Q Consensus 198 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 277 (395)
.|.++.+.+.++-+...++.|+-.++.++ ...... . .. .... .. .-...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~-~----~~-~~~~-~~-------------~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD-F----IA-ALLA-FG-------------LALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH-H----HH-HHHH-Hh-------------ccHHHHHHHHHHHHH
Confidence 36788899999999999999998887653 221111 0 00 0000 00 112256778888999
Q ss_pred HHHHHHHHHhcCCceeeeechhHHHHHHHHHHHH--HhccccchhhhhhHHHHhhhhheeeecCcc
Q 016076 278 MVTLISWCVRVKGPLFASVFSPMMLVVVALAASL--ILDEMLHLGSLLGATLIVCGLYAVLWGKGK 341 (395)
Q Consensus 278 ~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l--~~ge~~~~~~~~G~~li~~G~~l~~~~~~~ 341 (395)
++.+|.+++++.+.+.+..+....+++..+.++. ++||++|+.+++|+++|++|+++..+.++|
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~ 126 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK 126 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence 9999999999999999999999998888888875 799999999999999999999998765443
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.73 E-value=1e-07 Score=90.75 Aligned_cols=140 Identities=22% Similarity=0.175 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC---------CcH-HHHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAND-GMSLRVIIAYRLIFATVLMFPLALILERNCRSK---------LNW-KILFL 81 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~ 81 (395)
+..|.+++++++++|+...+..|...++ ++++..++++....+.+++.|+........... ... ..+..
T Consensus 143 ~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 143 NWAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 3569999999999999999999987661 389999999999999998888876543211000 000 11111
Q ss_pred HHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 82 GFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 82 ~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.+..+.....+.+.+++.+++++++..+++...+.|+++.++++++++|+++.. |++|..+++.|+.+...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 222332222234467778999999999999999999999999999999999999 59999999999999765
No 55
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.67 E-value=4e-09 Score=93.44 Aligned_cols=275 Identities=14% Similarity=0.134 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHH
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQ 94 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (395)
..++.+++-++.||..+.+.... |-.|.+.+.---+-+.++...+++. . .|...+..+...++.|.+-. +++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~--~--~p~~T~~~~iv~~isG~~Ws-~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF--V--SPELTLTIFIVGFISGAFWS-FGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee--e--cCccchhhHHHHHHhhhHhh-hhh
Confidence 34688899999999998876544 5677776554444444444433332 2 24456777877788887774 999
Q ss_pred HHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccch---hHHHHHHHHHHHhhhccccccccccc
Q 016076 95 NLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLL---GTLIGISGAMLLTLYKGVEIKIWSTH 170 (395)
Q Consensus 95 ~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~---g~~l~~~Gv~li~~~~g~~~~~~~~~ 170 (395)
...+.|+++.+.+.+.++.. ++-+-+.+++++.++|..+... .++ ++++.+.|+.+-.+.+..
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~-----~IlG~iAliliviG~~lTs~~~~~-------- 140 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQ-----IILGFIALILIVIGIYLTSKQDRN-------- 140 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchh-----HHHHHHHHHHHHHhheEeeeeccc--------
Confidence 99999999999999999997 8889999999999999988774 222 344455555555442210
Q ss_pred ccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhc
Q 016076 171 VDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCME 250 (395)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 250 (395)
|.+ .++.++..+|....+.+.+.|-.|.+..+...-+ .++....+.....+..+......+
T Consensus 141 -----------nk~-----~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~---g~saiLPqAiGMv~~ali~~~~~~ 201 (288)
T COG4975 141 -----------NKE-----EENPSNLKKGIVILLISTLGYVGYVVLFQLFDVD---GLSAILPQAIGMVIGALILGFFKM 201 (288)
T ss_pred -----------ccc-----ccChHhhhhheeeeeeeccceeeeEeeecccccc---chhhhhHHHHHHHHHHHHHhhccc
Confidence 001 3345667889999999999999999987665422 244444444444444444443321
Q ss_pred CCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhh----hhhHH
Q 016076 251 KNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGS----LLGAT 326 (395)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~----~~G~~ 326 (395)
+ ...+...+.-...|+. -+.+..++..+.+..+.++.=.+..+..+++.+-+.++++|+=|..+ ++|..
T Consensus 202 ~------~~~~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGii 274 (288)
T COG4975 202 E------KRFNKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGII 274 (288)
T ss_pred c------cchHHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHH
Confidence 1 1111233334455654 46788888888888888888888888899999999999999998776 46888
Q ss_pred HHhhhhheee
Q 016076 327 LIVCGLYAVL 336 (395)
Q Consensus 327 li~~G~~l~~ 336 (395)
+++.|..+..
T Consensus 275 livvgai~lg 284 (288)
T COG4975 275 LIVVGAILLG 284 (288)
T ss_pred HHHHHhhhhh
Confidence 8888876653
No 56
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.64 E-value=1.1e-06 Score=74.75 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC----C-------cHHH
Q 016076 16 PALMMVVVQVAFAGVNIFYKLAAND------GMSLRVIIAYRLIFATVLMFPLALILERNCRSK----L-------NWKI 78 (395)
Q Consensus 16 g~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~-------~~~~ 78 (395)
|.++++.+.++.+...++.|...+. ..++.++..+....+.+++++.+...+...... . +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5688999999999999999987765 689999999999999999999887765443110 0 2344
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 016076 79 LFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAML 155 (395)
Q Consensus 79 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~l 155 (395)
+..++..|++.. +.+.+.+..++++++...++......+.+.++++++++|+++... ++|+.++++|+.+
T Consensus 81 ~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~------~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQ------IIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHH------HHHHHHHHHHHhe
Confidence 556666676775 899999999999999999999999999999999999999999995 9999999999875
No 57
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.63 E-value=1e-07 Score=77.06 Aligned_cols=108 Identities=15% Similarity=0.212 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHH
Q 016076 232 ALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASL 311 (395)
Q Consensus 232 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l 311 (395)
.+++..+.+..........+..+.++......+......|++....++.++.++.++.++ .++.+..++|+++.+++.+
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHH
Confidence 355666666666666554321111221112345556666776666889999999999995 8889999999999999999
Q ss_pred HhccccchhhhhhHHHHhhhhheeeecCc
Q 016076 312 ILDEMLHLGSLLGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 312 ~~ge~~~~~~~~G~~li~~G~~l~~~~~~ 340 (395)
+++|+++..+++|+.++++|+++..+...
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999998876543
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.58 E-value=2e-06 Score=83.65 Aligned_cols=139 Identities=16% Similarity=0.139 Sum_probs=101.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHHHhhcccc-----------CCCc
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAND------GMSLRVIIAYRLIFATVLMFPLALILERNCR-----------SKLN 75 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-----------~~~~ 75 (395)
+..|.+++++++++|+...++.|...+. ..++.....+....+.++++|+......... ....
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 4679999999999999999999998763 2557767776778888888887664321100 0011
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 016076 76 WKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAML 155 (395)
Q Consensus 76 ~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~l 155 (395)
+......++.+.+...+.+.+-+++++++++..+++...+.|+++.++++++++|+++.. |++|.++++.|+.+
T Consensus 272 ~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~l 345 (350)
T PTZ00343 272 KGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALL 345 (350)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHH
Confidence 111111222222222244444446999999999999999999999999999999999999 59999999999988
Q ss_pred Hh
Q 016076 156 LT 157 (395)
Q Consensus 156 i~ 157 (395)
..
T Consensus 346 Ys 347 (350)
T PTZ00343 346 YS 347 (350)
T ss_pred Hh
Confidence 54
No 59
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.54 E-value=1.8e-06 Score=81.76 Aligned_cols=129 Identities=16% Similarity=0.161 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH----HHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhh
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLI----FATVLMFPLALILERNCRSKLNWKILFLGFLSGLFG 89 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 89 (395)
.+|+++.+++.+.|+......|.. +.+|...++.... .+.+++.++ + ++ ++ ...+.....+..|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~~-~~-~~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-LA-KP-LKKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-cc-cc-hHHHHHHHHHHHHHHH
Confidence 679999999999999999999976 3888888666665 333333322 1 11 12 2344555566688886
Q ss_pred hhhHHHHHHHHhh-ccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccc----hhHHHHHHHHHHHhh
Q 016076 90 GSLSQNLFVESLV-LTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKL----LGTLIGISGAMLLTL 158 (395)
Q Consensus 90 ~~~~~~~~~~al~-~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~----~g~~l~~~Gv~li~~ 158 (395)
.+++.+|+.+.+ +.+++.++++.+..|+...+.+++++||+.++++ + +|.++.+.|+.++..
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~------~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKRE------MIAISVGIILIIIAANILGI 288 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcce------eehhHHHHHHHHHHHHHHhc
Confidence 699999999999 9999999999999999999999999999999995 9 999999999988753
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.53 E-value=6.1e-07 Score=72.07 Aligned_cols=69 Identities=20% Similarity=0.122 Sum_probs=62.7
Q ss_pred HHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 83 FLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 83 ~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
...+++++.+++.++..++++.|.+.+..+.++.++++.+++++++|||++++ |++|+.++++|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 33444666789999999999999999999999999999999999999999999 5999999999999885
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.52 E-value=3.9e-06 Score=78.68 Aligned_cols=135 Identities=20% Similarity=0.241 Sum_probs=107.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIA-YRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
...|.++.+++++.|+...+..|... . .++..... +..........+.. ..... .....+.+......|+++..
T Consensus 152 ~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~g~~~~~ 226 (292)
T COG0697 152 SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFF--LSGFG-APILSRAWLLLLYLGVFSTG 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHH--hcccc-ccCCHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999776 3 66666666 34332222222221 11111 33567888899999998876
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
+++.+++++++..+++.++.+..+.|++..++++++++|+++..+ ++|.++.+.|+.+...
T Consensus 227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~------~~G~~li~~g~~l~~~ 287 (292)
T COG0697 227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQ------LLGAALVVLGVLLASL 287 (292)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHH------HHHHHHHHHHHHHHhc
Confidence 799999999999999999999999999999999999999999995 9999999999998864
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.43 E-value=4.7e-06 Score=68.63 Aligned_cols=119 Identities=18% Similarity=0.144 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHH
Q 016076 15 KPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQ 94 (395)
Q Consensus 15 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 94 (395)
+++++++.+.++-+...++.|...++ .+........ ... +. .. .+ ....+..|++...+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~~--~~~--~~--~~---~~---------p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWDF--IAA--LL--AF---GL---------ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhHH--HHH--HH--HH---hc---------cHHHHHHHHHHHHHHH
Confidence 47888999999999999999998775 4433322211 000 00 00 00 0124667777778999
Q ss_pred HHHHHHhhccChhHHHHhhhhhHHHHHHHHHH--hcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 95 NLFVESLVLTSATFASAMFNLIPAVTFVLATS--IGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 95 ~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~--~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.++.+++++.+++.+..+.+..++++.+.++. +++|++++.+ ++|+.++++|++++..
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~------~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKK------TLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHhcc
Confidence 99999999999999999999999989888885 8999999994 9999999999999864
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.39 E-value=1.3e-06 Score=70.18 Aligned_cols=66 Identities=18% Similarity=0.173 Sum_probs=60.7
Q ss_pred HHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 271 GIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 271 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
++++.+.++.++..++++.+.+.+-.+.++.++++.+++++++||++++.+++|.+++++|+++..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345667899999999999999999999999999999999999999999999999999999987753
No 64
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.25 E-value=5.6e-06 Score=75.85 Aligned_cols=142 Identities=21% Similarity=0.178 Sum_probs=113.9
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCccccc-ccchhhHHHHHHHHHh
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWK-LGWNIRLVTVAYSGIV 273 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~ 273 (395)
....|.++++.+-+.|+..-.+.|-+ +..+ +..+..++.+.+.++...+.........-+. ...+..+......+++
T Consensus 4 ~~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 4 DSRKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 34579999999999999988887665 4444 5889999999999988777766543211121 2334456666666665
Q ss_pred hhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecC
Q 016076 274 ASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGK 339 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~ 339 (395)
. ...+.++.+|.++.....+|+-.++.|++.+++|.++++|+++..|++..++..+|+....+..
T Consensus 82 i-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 82 I-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred H-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 4 5788999999999999999999999999999999999999999999999999999988876543
No 65
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.21 E-value=2.7e-05 Score=69.80 Aligned_cols=137 Identities=15% Similarity=0.091 Sum_probs=116.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
+..|..+.+.+..+|+...+..|...+. .+...-+..-+.++.++.+|+..-... ..-+.+.-...-+..++++..+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag--~~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAG--PALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcc--hhhcChHHHHHHHHHHHHhccc
Confidence 5689999999999999999999998754 566667888899999999998653322 2224667777888888999889
Q ss_pred HHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 93 SQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 93 ~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
-+.+=..++...|...-.++.++.|.+.++.++++++|+++.. ||.++..++.+.+-..+
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGSTL 282 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999 69999998888775543
No 66
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.20 E-value=1.9e-05 Score=75.54 Aligned_cols=141 Identities=15% Similarity=0.058 Sum_probs=109.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCC--cHHHHHHHHHHHhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKL--NWKILFLGFLSGLFG 89 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 89 (395)
+..+|-++++++++++|..+++-+...++ .+..++..+-.+++.++..+.....+++..... +++.+..++.. .+.
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~-~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~-~~~ 242 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKK-APRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGY-ALC 242 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHH-HHH
Confidence 46899999999999999999999999885 899998888888888888877776666554433 33333322222 223
Q ss_pred hhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhc
Q 016076 90 GSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYK 160 (395)
Q Consensus 90 ~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~ 160 (395)
....+.+.-..+++.+++...+=.-+..++..++..+++|+++++.. ++|.+++++|.++....+
T Consensus 243 lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly------~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 243 LFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLY------ILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHH------HHHHHHHHHHhheEEccC
Confidence 33455566677888888887777789999999999999999999996 999999999999886543
No 67
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.10 E-value=1.5e-05 Score=73.95 Aligned_cols=276 Identities=13% Similarity=0.163 Sum_probs=163.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
++..|.++.+.+.++.|...++-|....+ ... .-.| ....+++.+ +. .....|.+.+.
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~~~r--------------a~~gg~~yl--~~--~~Ww~G~ltm~ 75 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---SGLR--------------AGEGGYGYL--KE--PLWWAGMLTMI 75 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---hccc--------------ccCCCcchh--hh--HHHHHHHHHHH
Confidence 67899999999999999999999987554 110 1101 011111211 22 34557777778
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHV 171 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~ 171 (395)
++..+-|-|+.+.|++..+++..++-+..++++..++|||++... .+|.+++++|-.+++. .++.........
T Consensus 76 vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g------~lGc~l~v~Gst~iV~-haP~e~~i~t~~ 148 (335)
T KOG2922|consen 76 VGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLG------ILGCVLCVVGSTTIVI-HAPKEQEIESVE 148 (335)
T ss_pred HHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhh------hhheeEEecccEEEEE-ecCcccccccHH
Confidence 888888999999999999999999999999999999999999997 9999999999888775 333211100000
Q ss_pred cccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHH-----
Q 016076 172 DLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFA----- 246 (395)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 246 (395)
+.. .-..+...+.....+...++ +-... ...++.. .....|..+.+.+.++-..
T Consensus 149 el~---------------~~~~~~~Fliy~~~iil~~~--il~~~---~~p~~g~-tnilvyi~i~s~iGS~tV~svKal 207 (335)
T KOG2922|consen 149 EVW---------------ELATEPGFLVYVIIIILIVL--ILIFF---YAPRYGQ-TNILVYIGICSLIGSLTVMSVKAL 207 (335)
T ss_pred HHH---------------HHhcCccHHHHHHHHHHHHH--HHhee---ecccccc-cceeehhhHhhhhcceeeeeHHHH
Confidence 000 00011111111111111111 11111 1222221 2344555555555321111
Q ss_pred -----HHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHH-HHHHHHHHHHhccccc--
Q 016076 247 -----LCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMML-VVVALAASLILDEMLH-- 318 (395)
Q Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~p-v~a~i~~~l~~ge~~~-- 318 (395)
.....+ .+ ...+..|..++.... +........++|++..+++.++.+.+..= .++++.+.++|.|.-.
T Consensus 208 g~aiklt~~g~-~q--l~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~ 283 (335)
T KOG2922|consen 208 GIAIKLTFSGN-NQ--LFYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQD 283 (335)
T ss_pred HHHHHHHhcCC-cc--cccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 111111 11 122234444444444 44455566789999999988888866543 6677778888888543
Q ss_pred ----hhhhhhHHHHhhhhheeeecCcc
Q 016076 319 ----LGSLLGATLIVCGLYAVLWGKGK 341 (395)
Q Consensus 319 ----~~~~~G~~li~~G~~l~~~~~~~ 341 (395)
.....|...++.|+++....|.+
T Consensus 284 ~~~i~~~~~Gf~ti~~G~flL~~~kd~ 310 (335)
T KOG2922|consen 284 ALDIAGELCGFVTIFLGIFLLHRTKDM 310 (335)
T ss_pred HHHHHHHHHhHHHhhheeeEeeeeccc
Confidence 33568888999999888544433
No 68
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.93 E-value=0.0042 Score=58.77 Aligned_cols=301 Identities=15% Similarity=0.106 Sum_probs=176.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccc----cCCCcHHHHHHHHHHHh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNC----RSKLNWKILFLGFLSGL 87 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~ 87 (395)
....|++...++.++-+...+-.|...+ .+-...=....+++.+++-++..+..-+. ....+...+....+.|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 5678999999999999999998887643 55444334455555544333322222211 12345567777788888
Q ss_pred hhhhhHHHHHHHHhhccChhHHHHhh-hhhHHHHHHHHHHhcccc--cccccccccccchhHHHHHHHHHHHhhhccccc
Q 016076 88 FGGSLSQNLFVESLVLTSATFASAMF-NLIPAVTFVLATSIGLEK--LGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEI 164 (395)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~a~~i~-~~~Pi~~~lla~~~l~e~--~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~ 164 (395)
+-. ++...|-.+++|+..+...-+. .+.-++-.++-.++.++- + ..+..+..-++|++++++|+.+...-+ . .
T Consensus 82 lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l-~~~~~g~~vL~Gv~v~LiGIai~g~AG-~-~ 157 (344)
T PF06379_consen 82 LWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDEL-LATPSGQIVLLGVAVCLIGIAICGKAG-S-M 157 (344)
T ss_pred HHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCccccc-ccCCCchhhhhHHHHHHHHHHHHhHHH-H-h
Confidence 885 8999999999999888766444 355555555555543321 1 001122334899999999999986532 1 1
Q ss_pred ccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhh------hhcC-Ccc----hHHHH
Q 016076 165 KIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLS------EEYP-CQY----SSTAL 233 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~------~~~~-~~~----~~~~~ 233 (395)
+.. ++.+ +.+..+..+|+++++.+++..|.++.-...-. .... +|. .....
T Consensus 158 Ke~-----~~~~-------------~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vv 219 (344)
T PF06379_consen 158 KEK-----ELGE-------------EAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVV 219 (344)
T ss_pred hhh-----hhcc-------------chhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhh
Confidence 110 0000 22345678999999999998888876543321 1111 111 12233
Q ss_pred HHHHHHHHHHHHHHHh---cCCccc---ccc-cc--hhhHHHHHHHHHhhhhHHHHHHHHHHhcCCce----eeeechhH
Q 016076 234 MCVMGAIQAVAFALCM---EKNWDQ---WKL-GW--NIRLVTVAYSGIVASGFMVTLISWCVRVKGPL----FASVFSPM 300 (395)
Q Consensus 234 ~~~~~~i~~~~~~~~~---~~~~~~---~~~-~~--~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~----~~s~~~~~ 300 (395)
.+..+.+.-....++. .++.+. +.. .+ .......+..|++- ...++++..+-.+.+.. --.+.+.+
T Consensus 220 v~~GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~lW-y~qfffYg~G~s~lg~~~~~~sW~i~ma~ 298 (344)
T PF06379_consen 220 VLWGGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVLW-YSQFFFYGMGESKLGASGPFSSWAIHMAL 298 (344)
T ss_pred hhhhHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCccccHHHHHHHHH
Confidence 3444444444444432 223221 111 11 13444455555543 45667777777777643 33456777
Q ss_pred HHHHHHHHHHHHhcccc------chhhhhhHHHHhhhhheeeec
Q 016076 301 MLVVVALAASLILDEML------HLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 301 ~pv~a~i~~~l~~ge~~------~~~~~~G~~li~~G~~l~~~~ 338 (395)
..+++-+++ ++++|.- -..-++|.++++.+++++-++
T Consensus 299 ~vl~snvwG-l~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 299 IVLFSNVWG-LILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHHHHHHH-HHHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 888888998 4566632 234578888888887776443
No 69
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.91 E-value=0.00018 Score=68.55 Aligned_cols=131 Identities=15% Similarity=0.040 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHhhhhcC-C--cchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHH
Q 016076 208 FSYALWLIIQAKLSEEYP-C--QYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISW 284 (395)
Q Consensus 208 ~~~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 284 (395)
.++..+.+.++++.++.. . |..+++.++....+...+.......+.. ....+...+..++ ...++..+.+.
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~ 83 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKS-----RKIPLKKYAILSF-LFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCC-----CcChHHHHHHHHH-HHHHHHHHHHH
Confidence 344456677788776533 3 6778888888888777766655441111 1112333444454 45678888999
Q ss_pred HHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccccc
Q 016076 285 CVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKEMK 344 (395)
Q Consensus 285 a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~~~ 344 (395)
++++++.....++....|+.++++++++++++.+..+++++.++.+|+++....+.++.+
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~ 143 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSS 143 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccc
Confidence 999999999999999999999999999999999999999999999999999877655433
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.89 E-value=8.9e-05 Score=60.03 Aligned_cols=69 Identities=22% Similarity=0.309 Sum_probs=58.3
Q ss_pred HHhhhhHHHHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecC
Q 016076 271 GIVASGFMVTLISWCVRVKGPLFASVF-SPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGK 339 (395)
Q Consensus 271 g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~ 339 (395)
.+++.++++.++..++++++.+.+=.+ ..+..+.+.+.+++++||++++.+++|.++|++|++......
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 344567899999999999988765444 568889999999999999999999999999999998885443
No 71
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.88 E-value=0.00017 Score=66.46 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=90.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
+..+++++.+++.+.|.....+.|.. +.++....+-+.+-..+....+....++. ...+...+-++.|++-.
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~~----~~~k~~~~nil~G~~w~- 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKKP----FFEKKSWKNILTGLIWG- 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhccccc----ccccchHHhhHHHHHHH-
Confidence 45789999999999999999999975 48888877766555544444444333111 22233444566777774
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhccccccccc
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRT 136 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~ 136 (395)
.++.+++.|.+....+.+..+.++..++..+-+.+++||+-++++
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke 251 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKE 251 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhh
Confidence 999999999999999999999999999999999999999988774
No 72
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.85 E-value=8.4e-06 Score=73.47 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=99.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhh
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVA 274 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 274 (395)
...+|..+...+ ..+...++..++..+. +|.......+++-.+...|..+....+. +.+...+. +++.=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~--~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~--~LiLRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEN--DPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRK--WLILRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhcc--ChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEE--EEEeehhh-
Confidence 456788888888 7777778887887765 4566666665555555444444332221 12222222 22333443
Q ss_pred hhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecC
Q 016076 275 SGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGK 339 (395)
Q Consensus 275 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~ 339 (395)
+..+..+.++++++.+.+.+.++...+|+++.++++++++|+.|..+.+|..+.+.|+++..+..
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 34677788899999999999999999999999999999999999999999999999999998765
No 73
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.77 E-value=0.00011 Score=69.57 Aligned_cols=120 Identities=20% Similarity=0.172 Sum_probs=89.4
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHh
Q 016076 194 GKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIV 273 (395)
Q Consensus 194 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 273 (395)
.....|..+++.++++.+....++|+...+.+. .....- ....+.+. -...+.|.+
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~----------------~~~~~~l~-------~~~W~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAG----------------SGGRSYLR-------RPLWWIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccc----------------chhhHHHh-------hHHHHHHHH
Confidence 456789999999999999999999998766432 000000 00000010 111223344
Q ss_pred hhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 274 ASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
...++..+.+.|+...+++.++.++.++.++..+++..+++|+++..++.|+++++.|..+...
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 4556777888899999999999999999999999999999999999999999999999877643
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.72 E-value=0.00045 Score=57.66 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
..++++.++++-++...+..++.++..+|....+..+..+.+.+.....+.++. .........|+..+ .|+ .....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 367889999999999999999999888789999999999999988888877653 22211122233322 444 45566
Q ss_pred HHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHH----HhccccchhhhhhHHHHhhhhhe
Q 016076 279 VTLISWCVRVKGPLFASVF-SPMMLVVVALAASL----ILDEMLHLGSLLGATLIVCGLYA 334 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l----~~ge~~~~~~~~G~~li~~G~~l 334 (395)
..+....+++++++....+ ..-+.+.+.+++.+ .-.+++++.+++|..++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 6777788899988776655 45566777788875 23567899999999999999864
No 75
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.60 E-value=0.00026 Score=55.49 Aligned_cols=65 Identities=25% Similarity=0.219 Sum_probs=58.3
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
++++.+++.++-.|++++|.+.+..+.. ...+.+++.++++++|+++.. |++++.+.++|++.+-
T Consensus 37 ~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 37 IVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 3444588999999999999999998876 999999999999999999999 5999999999999874
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.57 E-value=0.0014 Score=52.10 Aligned_cols=63 Identities=11% Similarity=0.114 Sum_probs=56.9
Q ss_pred hhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 016076 88 FGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
....+++++...+++++|.+.+..+.. ..-+.+++++++++||++++.+ ++++.+.+.|++.+
T Consensus 43 ~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~------~~gi~lIi~GVi~l 106 (109)
T PRK10650 43 AAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKG------WIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHHHh
Confidence 334478999999999999999998886 8999999999999999999994 99999999999886
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.51 E-value=0.00039 Score=56.32 Aligned_cols=67 Identities=18% Similarity=0.103 Sum_probs=59.8
Q ss_pred HhhhhhhHHHHHHHHhhccChhHHHHhh-hhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 86 GLFGGSLSQNLFVESLVLTSATFASAMF-NLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~a~~i~-~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.++.+.++++++..+++++|.+.+..+. .+.-+.++++++++++|++++. |++|+.+.++|++++-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 3444558999999999999999999997 5999999999999999999999 49999999999988854
No 78
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.50 E-value=0.00048 Score=55.03 Aligned_cols=67 Identities=15% Similarity=0.230 Sum_probs=59.4
Q ss_pred HhhhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 86 GLFGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.++.+.+++.++..++++.|.+.+..+.. +.-+.+.++++++++|++++.+ ++|+.+.++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~------~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPA------IIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHHHhc
Confidence 34455588889999999999999999865 8999999999999999999995 9999999999999854
No 79
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.49 E-value=0.00065 Score=54.26 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=56.5
Q ss_pred HhhhhHHHHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeec
Q 016076 272 IVASGFMVTLISWCVRVKGPLFASVF-SPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
+++.++++.++..++++++.+.+=.+ ..+..+.+.+.++++|+|++++.+++|+++|++|++.....
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 44567888889999999888665444 66788999999999999999999999999999999988543
No 80
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.47 E-value=0.0026 Score=53.10 Aligned_cols=130 Identities=15% Similarity=0.159 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC-HHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 17 ALMMVVVQVAFAGVNIFYKLAANDGMS-LRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 17 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
+++.+++..+-+....++-...+. .. |..-+++.+..+++++..+....+++..+..+...| +....|+++. ..-.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~-w~~lGG~lG~-~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPW-WAYLGGLLGV-FFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCCh-HHhccHHHHH-HHHH
Confidence 456677777777777777777665 54 999999999999999988877776543333322233 3334777775 8888
Q ss_pred HHHHHhhccChhHHHHhhh-hhHHHHHHHHHH----hcccccccccccccccchhHHHHHHHHHH
Q 016076 96 LFVESLVLTSATFASAMFN-LIPAVTFVLATS----IGLEKLGIRTRAGKAKLLGTLIGISGAML 155 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~----~l~e~~~~~~~~~~~q~~g~~l~~~Gv~l 155 (395)
+..++...++++.+..+.- -+-+...++..+ .-|+++++.+ ++|+.+.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r------~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRR------ILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHH------HHHHHHHHHHHhC
Confidence 8999999999999888776 444555555554 3568888884 9999999999864
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.37 E-value=0.00089 Score=52.94 Aligned_cols=65 Identities=14% Similarity=0.044 Sum_probs=58.4
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
+.++.+++++...+++++|.+.+..+.. +..+.+.+++++++||++++.+ ++++.+.++|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~------~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPAR------LLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------HHHHHHHHHHHHhhh
Confidence 3444588999999999999999998886 9999999999999999999995 999999999999873
No 82
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.35 E-value=0.0035 Score=57.56 Aligned_cols=198 Identities=11% Similarity=0.025 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHH
Q 016076 16 PALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQN 95 (395)
Q Consensus 16 g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 95 (395)
|++.++++++++|.+++-.|..- . .|++.+.++......+.-++..++.. .++ -+...++.|.+- +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~-gDg~~fQw~~~~~i~~~g~~v~~~~~---~p~----f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-T-GDGFFFQWVMCSGIFLVGLVVNLILG---FPP----FYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-C-CCcHHHHHHHHHHHHHHHHHHHHhcC---CCc----ceeHHHhhhhhh-hcCce
Confidence 56889999999999999999653 3 67777776666655555554444322 222 233445566666 48899
Q ss_pred HHHHHhhccChhHHHHhhhhhHH-HHHHHHHH-hcccccccccccccccchhHHHHHHHHHHHhhhcccccc----cccc
Q 016076 96 LFVESLVLTSATFASAMFNLIPA-VTFVLATS-IGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIK----IWST 169 (395)
Q Consensus 96 ~~~~al~~~~~~~a~~i~~~~Pi-~~~lla~~-~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~----~~~~ 169 (395)
+-.-.++.+..+....+.++.-+ .--..+.+ +++++...-. ......+|++++++|..+..+.+.++.+ ..+.
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 99999999999999999986433 33333333 4443322111 1122377888888887777654332211 0000
Q ss_pred cccccccCCCC----Ccccccccc-CCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 016076 170 HVDLLHHAGGG----GHVASVPLQ-SSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEY 224 (395)
Q Consensus 170 ~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 224 (395)
+...++..+-. ...+++... .....++..|.++++++++.|+...+=...+.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 150 PLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred ccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 01111000000 001111000 01123578899999999999999887777776653
No 83
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.29 E-value=0.0019 Score=51.36 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=54.0
Q ss_pred hhhHHHHHHHHHHhcCCcee-eeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 274 ASGFMVTLISWCVRVKGPLF-ASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
+.++++.+...++|+++... .++-..+..+.+.+.++++++|++++.+++|.++|+.|++..
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 45688999999999998754 455677888999999999999999999999999999998875
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.25 E-value=0.002 Score=51.01 Aligned_cols=66 Identities=21% Similarity=0.294 Sum_probs=56.1
Q ss_pred HhhhhHHHHHHHHHHhcCCcee-eeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 272 IVASGFMVTLISWCVRVKGPLF-ASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
+++.+.++.+...++|+++... .++-.-+..+.+.+.++++++|++++.+++|.+++++|++....
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3355788999999999998754 45567788899999999999999999999999999999988743
No 85
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.25 E-value=0.00063 Score=54.24 Aligned_cols=110 Identities=18% Similarity=0.140 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHH
Q 016076 21 VVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVES 100 (395)
Q Consensus 21 l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 100 (395)
++..++||..+++.|..... .++..-.. |..--... + ..+|.+.+ .+..+..+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~-----L-----------l~n~~y~i--pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF-----L-----------LLNPKYII--PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH-----H-----------HHhHHHHH--HHHHHHHHHHHHHHH
Confidence 35678999999999998874 55444331 21111111 0 12222222 333334788999999
Q ss_pred hhccChhHHHHhh-hhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 016076 101 LVLTSATFASAMF-NLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 101 l~~~~~~~a~~i~-~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
+...+.+.+.++. ++.=++|++.++++.+|..++++ ++|+.+.++|+.+.
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~------~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRT------WLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhH------HHHHHHHHcCeeee
Confidence 9999999999996 69999999999888888888886 99999999998764
No 86
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.21 E-value=0.0032 Score=52.76 Aligned_cols=139 Identities=14% Similarity=0.096 Sum_probs=93.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhh
Q 016076 196 RLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVAS 275 (395)
Q Consensus 196 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 275 (395)
..+..+.++.++++-.+......++.+..++|.......+..+++.+..+.++.+. ...+.......||. ...|+++
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~-~~~~a~~~~~pwW~-~~GG~lG- 79 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQG-HPGLAAVASAPWWA-WIGGLLG- 79 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcC-CCchhhccCCchHH-HHccchh-
Confidence 34667889999999999999999999988888999999999999988888877543 22222222222332 3334332
Q ss_pred hHHHHHHHHHHhcCCc-eeeeechhHHHHHHHHHHHHHhc----cccchhhhhhHHHHhhhhheeee
Q 016076 276 GFMVTLISWCVRVKGP-LFASVFSPMMLVVVALAASLILD----EMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 276 ~~~~~l~~~a~~~~~~-~~~s~~~~~~pv~a~i~~~l~~g----e~~~~~~~~G~~li~~G~~l~~~ 337 (395)
.+--+.......++++ ..+.....-+.+.+.+.+.+=+. .+++...++|++++++|+++...
T Consensus 80 a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 80 AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 2222223344555555 44455566677888888866433 47789999999999999666543
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.17 E-value=0.0015 Score=51.25 Aligned_cols=65 Identities=26% Similarity=0.363 Sum_probs=56.0
Q ss_pred hhhHHHHHHHHHHhcCCce-eeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeec
Q 016076 274 ASGFMVTLISWCVRVKGPL-FASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~-~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
+...+|.+...++|+++.. ..++-.-+..+.+.+.++++|+|++++.+++|.+++++|++.....
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999998874 4566688888999999999999999999999999999999876543
No 88
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.15 E-value=0.0011 Score=62.93 Aligned_cols=138 Identities=20% Similarity=0.125 Sum_probs=110.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh---cCCCHHHHHHHHHHHHHHHHH-HHHHHhhcccc---C--CCcHHHHHHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAN---DGMSLRVIIAYRLIFATVLMF-PLALILERNCR---S--KLNWKILFLGF 83 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~r~~~~~~~~~-~~~~~~~~~~~---~--~~~~~~~~~~~ 83 (395)
+..|.++++++.+..+...++.|.... ..++++.+..+-.-++.++++ |+....+.... . ..+...+. ..
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~-~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLI-LL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHH-HH
Confidence 578999999999999999999999883 358899988888888888888 87776554332 1 12333333 33
Q ss_pred HHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 84 LSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 84 ~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
+..++.. +.|..-|..+.++++-.-++...+--+++...+++++++++++.. ..|..++++|+.+=..
T Consensus 240 ~~sv~~f-~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n------~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLAF-LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLN------ALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHH-HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhh------HHHHHHHHHHHHHHHH
Confidence 3345554 778888899999999999999999999999999999999999994 9999999999998643
No 89
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.12 E-value=0.0013 Score=60.45 Aligned_cols=132 Identities=9% Similarity=0.051 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
|.+.+++|+++|+...+=.|+...+ ++.....+++....+...+..++.+. +.+ ..+....|. .-+.+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f-------~p~amlgG~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGF--PPF-------YPWAMLGGA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccc-------eeHHHhhhh-hhhcC
Confidence 5677889999999888887776544 56666666666666666665555432 111 111122222 23456
Q ss_pred HHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHH-Hhcccc-----chhhhhhHHHHhhhhheeeecCccc
Q 016076 279 VTLISWCVRVKGPLFASVF-SPMMLVVVALAASL-ILDEML-----HLGSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l-~~ge~~-----~~~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
..+..-+++.++....-.+ ...+.+.+...+.+ +||+++ .+..++|++++++|..++..-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 6666667777776665555 44467777777765 566544 4678999999999988887766554
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.05 E-value=0.0017 Score=59.75 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=69.2
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccc
Q 016076 263 RLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 263 ~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
+.+.+..-++ ...+...+.+.++++++|+...++..+..++++++++++++.+++..||++..++++|+.+........
T Consensus 16 ~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 16 DTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 4555555565 367888899999999999999999999999999999999999999999999999999999987765544
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.97 E-value=0.0041 Score=48.19 Aligned_cols=57 Identities=26% Similarity=0.375 Sum_probs=35.3
Q ss_pred HhhhhHHHHHHHHHHhcCCceee-eechhHHHHHHHHHHHHHhccccchhhhhhHHHH
Q 016076 272 IVASGFMVTLISWCVRVKGPLFA-SVFSPMMLVVVALAASLILDEMLHLGSLLGATLI 328 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li 328 (395)
+.+.++++.++..++|+++.+.+ .+...+..+.+.+.+.+++||++|+.+++|.++|
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33567888999999999998877 4556789999999999999999999999999886
No 92
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=96.86 E-value=0.006 Score=58.06 Aligned_cols=142 Identities=15% Similarity=0.249 Sum_probs=111.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHHHhhc---cccCCCcHHHHHHHHHH
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAAND---GMSLRVIIAYRLIFATVLMFPLALILER---NCRSKLNWKILFLGFLS 85 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 85 (395)
+...|-++.++++++||...++.|.-.++ .+|--.+--+-.++..++++|..++... .+..-.+..+...++..
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 45799999999999999999999987654 2454454555555666666655554332 22333345666677888
Q ss_pred HhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhh
Q 016076 86 GLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLY 159 (395)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~ 159 (395)
++++..++.+++..|.-.+++-.+++-..++....++...++-+.++++.. ++|.+.+++|-+++...
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~------iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALY------IIGSIPIFVGFVIVNIS 391 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHH------HHHHHHHHHHHhheecc
Confidence 899999999999999999999999999998888888999888899999995 99999999998888653
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.85 E-value=0.0009 Score=59.98 Aligned_cols=132 Identities=18% Similarity=0.142 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
..+++++=++.|+..-....|...+ |..-+.-+++.+.++.+.+.++..+ ...+ ..+..-+..|++. .++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG~---p~qQ~lGtT~GALifaiiv~~~~~p-~~T~-----~~~iv~~isG~~W-s~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGGK---PYQQTLGTTLGALIFAIIVFLFVSP-ELTL-----TIFIVGFISGAFW-SFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCCC---hhHhhhhccHHHHHHHHHHheeecC-ccch-----hhHHHHHHhhhHh-hhh
Confidence 4678899999999887776665433 5666777777777777777766332 2111 2344445556654 579
Q ss_pred HHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHHHhccccchhhh----hhHHHHhhhhheeeecCc
Q 016076 279 VTLISWCVRVKGPLFASVF-SPMMLVVVALAASLILDEMLHLGSL----LGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l~~ge~~~~~~~----~G~~li~~G~~l~~~~~~ 340 (395)
+..++.+++..+.+++..+ .-.+.+-+.+++++.|||..+..+. +..++++.|+++..+.++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 9999999999999999988 5678889999999999999987763 456778889998877655
No 94
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.81 E-value=0.0065 Score=58.36 Aligned_cols=138 Identities=17% Similarity=0.124 Sum_probs=93.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHH----HHHhcCCc-ccccccchhhHHHHHH
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAF----ALCMEKNW-DQWKLGWNIRLVTVAY 269 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~ 269 (395)
+...|.++.+++++||+-+.+-.|+ .+..+ ++.. |. ..+.+..+.. +.+..++. +.....+...+.....
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 4568999999999999999999888 34432 3333 33 2222211111 22222221 2222233445666666
Q ss_pred HHHhhhhHHHHHHHHHHhcCCceeeeec-hhHHHHHHHHHHHHHhcccc---c----hhhhhhHHHHhhhhheeeec
Q 016076 270 SGIVASGFMVTLISWCVRVKGPLFASVF-SPMMLVVVALAASLILDEML---H----LGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 270 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l~~ge~~---~----~~~~~G~~li~~G~~l~~~~ 338 (395)
.|++ -.+++..+..++++.+.+....+ .-++.+.+.+++.+++||.. + ..-++|.+++++|+++..+.
T Consensus 79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 6665 46899999999999999887766 67888999999999999865 2 33578999999999998763
No 95
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.80 E-value=0.015 Score=46.37 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHH
Q 016076 204 LGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLIS 283 (395)
Q Consensus 204 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~ 283 (395)
++.+++|+..+.+.||..+..++.... . +..-.... ++. .|-+++ ..+....+..+++
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~-------------n~~y~i--pf~lNq~GSv~f~ 59 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL-------------NPKYII--PFLLNQSGSVLFF 59 (113)
T ss_pred eeehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH-------------hHHHHH--HHHHHHHHHHHHH
Confidence 346789999999999998876532222 1 11111111 111 111111 2223456677788
Q ss_pred HHHhcCCceeeeech-hHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhhee
Q 016076 284 WCVRVKGPLFASVFS-PMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAV 335 (395)
Q Consensus 284 ~a~~~~~~~~~s~~~-~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~ 335 (395)
+.+.+.+.+.+.++. .+.-+++++.++++.+|..+...++|+.++++|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 899999999999995 8999999999988888888888999999999998764
No 96
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.67 E-value=0.0044 Score=47.98 Aligned_cols=54 Identities=20% Similarity=0.110 Sum_probs=33.9
Q ss_pred hhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHH
Q 016076 89 GGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLI 148 (395)
Q Consensus 89 ~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l 148 (395)
...++..++..++++.|.+.+..+.. +..+.+.+++.++++|+++..+ ++|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~------~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSK------WLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHH------Hhheee
Confidence 44588899999999999999988775 9999999999999999999994 888765
No 97
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.29 E-value=0.0032 Score=58.77 Aligned_cols=122 Identities=17% Similarity=0.185 Sum_probs=95.2
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH-hcCCcccccccchhhHHHHHHH
Q 016076 192 DTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALC-MEKNWDQWKLGWNIRLVTVAYS 270 (395)
Q Consensus 192 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 270 (395)
...+...|.++++.+.+..+...++.|+-.++... ...- .+.+.... .-.+.+.
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~------------------~~~ra~~gg~~yl-------~~~~Ww~ 69 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA------------------SGLRAGEGGYGYL-------KEPLWWA 69 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh------------------hcccccCCCcchh-------hhHHHHH
Confidence 34567789999999999999999998887666321 0000 01111111 1234456
Q ss_pred HHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeec
Q 016076 271 GIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 271 g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
|++..+++..+.+.|....+++.++.++.++.+++++++..++.|++++...+|+++.++|..+...-
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 77888899999999999999999999999999999999999999999999999999999997776543
No 98
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.92 E-value=0.21 Score=47.61 Aligned_cols=139 Identities=12% Similarity=0.032 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcC---CcchHHHHHHHHHHHHHHHHHHHhcCC--------cccccccchhhHHHH
Q 016076 199 GSLLALGSCFSYALWLIIQAKLSEEYP---CQYSSTALMCVMGAIQAVAFALCMEKN--------WDQWKLGWNIRLVTV 267 (395)
Q Consensus 199 G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 267 (395)
=.+..+...+.++......|...++.. .|.+..+..-+.-.++.....+..++. ...+....+.+...+
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 344555555666666666666655431 346666666666666666666554311 111111122222333
Q ss_pred HHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeec
Q 016076 268 AYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 268 ~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
..-+. ...+-.-+.+.+..+.+|++.++...+.++.++++.+++++++++..||...++...|+.+....
T Consensus 96 ~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~ 165 (345)
T KOG2234|consen 96 SVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLP 165 (345)
T ss_pred HHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 32233 34555567889999999999999999999999999999999999999999999999999998743
No 99
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.87 E-value=0.14 Score=47.69 Aligned_cols=139 Identities=14% Similarity=0.065 Sum_probs=107.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHHhhccccC-----CCcHHHHHHHHHH
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAAND-GMSLRVIIAYRLIFATVLMFPLALILERNCRS-----KLNWKILFLGFLS 85 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 85 (395)
+...|+.++....++=|..+..-+...+. +++++.+.+.-.++.++......... ...++ ...++.++-+++.
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHH
Confidence 35788999988888888888777666653 68899988888888777766653322 22222 2245667777888
Q ss_pred HhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 86 GLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 86 g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
+.++. .++.+.++-++.-++-.-+.+..+=-+++.+++.++++.++++. ||+|+.+.+.|+.+=.+
T Consensus 248 s~~ga-vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~~ 313 (327)
T KOG1581|consen 248 STCGA-VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEIL 313 (327)
T ss_pred HHhhh-hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHHH
Confidence 88885 88888888888877777777777888899999999999999999 69999999999988654
No 100
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.85 E-value=0.04 Score=49.80 Aligned_cols=59 Identities=12% Similarity=0.003 Sum_probs=53.0
Q ss_pred hhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 016076 91 SLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAML 155 (395)
Q Consensus 91 ~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~l 155 (395)
.....+..+.+++.+....+....+.++++.+++.++++|+++.. +++|+.+.+.|+.+
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 466677889999999999999999999999999999999999999 59999999888653
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.67 E-value=0.29 Score=41.11 Aligned_cols=137 Identities=15% Similarity=0.079 Sum_probs=85.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
....+++.+++..+-.....+.-...+..-+|..-.+..+...+.++..+.+.+.++......++.-++.+..|+++. .
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-I 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-h
Confidence 345567777777777777777666666423588889999999888888887774433332222233334455555554 5
Q ss_pred HHHHHHHHhhccChhHHHHhh-hhhHHHHHHHHHHhc----ccccccccccccccchhHHHHHHHHHHH
Q 016076 93 SQNLFVESLVLTSATFASAMF-NLIPAVTFVLATSIG----LEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 93 ~~~~~~~al~~~~~~~a~~i~-~~~Pi~~~lla~~~l----~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
+-..-......+.++.+..+. .-+-+...++..+=. +.++++. +++|+++.++|+.++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 555555555566655555444 444455555544322 3566666 599999999995554
No 102
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=94.21 E-value=0.065 Score=49.82 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhcc-------------ccCCCcHHHHHHHHHHH
Q 016076 20 MVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERN-------------CRSKLNWKILFLGFLSG 86 (395)
Q Consensus 20 ~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~g 86 (395)
|+++.++||......|++.++ -...+...+-+.++.++...+..+.... +..+-++......+..|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~-gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERR-GRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhc-CCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467889999999999988775 4444456666666655555444332110 01234677777777778
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHH
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAML 155 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~l 155 (395)
++-. +++.+..+|+.+...+.+-++.. +.-+.-+.+.++ +..|.++-. --..|+.+.++.+++
T Consensus 80 vvfn-lgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VVFN-LGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hhhh-hHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCce----EEEccHHHHHHHHHH
Confidence 7775 99999999999999998888775 333334444444 345554321 014455555555544
No 103
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.97 E-value=0.037 Score=49.46 Aligned_cols=136 Identities=14% Similarity=0.108 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-cCCc----------chHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHH
Q 016076 201 LLALGSCFSYALWLIIQAKLSEE-YPCQ----------YSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAY 269 (395)
Q Consensus 201 ~~~l~a~~~~a~~~v~~~~~~~~-~~~~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (395)
+++.+--+||-.|-+.++|+.++ |..| ..+.++++....++.=++..+... ...+ ....+.+.+.
T Consensus 16 ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~--~~~D--~t~~~~YaAc 91 (337)
T KOG1580|consen 16 ICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKK--TEID--NTPTKMYAAC 91 (337)
T ss_pred EEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccc--cccc--CCcchHHHHH
Confidence 45566678899999999998763 3311 234455555555554444443322 1111 1123333322
Q ss_pred HHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccc
Q 016076 270 SGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 270 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
.+...+++...+.|+++++--...+--+..|+=.+++++++.+.+-+|..+.-..+|++|+.+..+.++|.
T Consensus 92 --s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv 162 (337)
T KOG1580|consen 92 --SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKV 162 (337)
T ss_pred --HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhcccccc
Confidence 23556777888899999988887888899999999999999999999999999999999999998875554
No 104
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.16 E-value=0.95 Score=42.61 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCcchHHH--HHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHH
Q 016076 201 LLALGSCFSYALWLIIQAKLSEEYPCQYSSTA--LMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFM 278 (395)
Q Consensus 201 ~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 278 (395)
..++.=+++-.+-.+..|.....++.|..... ++.+.+.+.....-...--+++..+.....-|..+-.+-. ..
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~----~~ 90 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV----GM 90 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH----HH
Confidence 33344444444445556666677765544444 7777777666655544332333333322233433322211 22
Q ss_pred HHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 279 VTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 279 ~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
...-..+.++++.....++...+|+++++.+.++++.+++...+.....+++|.....
T Consensus 91 i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 91 LFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 2334568899999999999999999999999999999999999999999999877664
No 105
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=93.05 E-value=0.77 Score=42.96 Aligned_cols=122 Identities=15% Similarity=0.169 Sum_probs=83.5
Q ss_pred HHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCccc--ccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeee
Q 016076 218 AKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNWDQ--WKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFAS 295 (395)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s 295 (395)
+...+.++-|+..+......-..++............. -.......+-.++-.|+ ++++=..+.++++++++.+..+
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYT 114 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYT 114 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeee
Confidence 33334455566666666655555444444433321111 11111112222333444 6677778899999999999999
Q ss_pred echhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCc
Q 016076 296 VFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 296 ~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~ 340 (395)
+.-+.+++|..+++.++-=|++++.-..=..+|-+|+++..+...
T Consensus 115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT 159 (349)
T KOG1443|consen 115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST 159 (349)
T ss_pred eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc
Confidence 999999999999999999999999999989999999999987653
No 106
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=92.19 E-value=0.38 Score=37.43 Aligned_cols=111 Identities=24% Similarity=0.322 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCH------HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhh
Q 016076 19 MMVVVQVAFAGVNIFYKLAANDGMSL------RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSL 92 (395)
Q Consensus 19 ~~l~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 92 (395)
-+++..++||..+++.|.... +.+- ....+.|-.... -.+|+.+.. -.++. .
T Consensus 7 ~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lqe~~tl----------------~l~w~Y~iP----FllNq-c 64 (125)
T KOG4831|consen 7 KLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQEMKTL----------------FLNWEYLIP----FLLNQ-C 64 (125)
T ss_pred HHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHHHHHHH----------------HHhHHHHHH----HHHHH-h
Confidence 356778999999999998765 3432 122222221110 012233222 12343 6
Q ss_pred HHHHHHHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 93 SQNLFVESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 93 ~~~~~~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
+..+||.-+++.+.+.+..+.+ +.-.++.+.+..+..|-..++. +.|..+..+|+.+.+
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a------~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLA------LLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhcccccccee------ehhhhHHhhhhhhee
Confidence 7788999999999999998876 7888888888776555555554 899999999988753
No 107
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=92.11 E-value=0.14 Score=44.69 Aligned_cols=63 Identities=16% Similarity=0.099 Sum_probs=58.1
Q ss_pred HHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecC
Q 016076 277 FMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGK 339 (395)
Q Consensus 277 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~ 339 (395)
.+.+++..|++.++++.++.+....-.+..+++++++||++...+++.+.+.+.|+++..+..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 356778899999999999999999999999999999999999999999999999999987653
No 108
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=90.85 E-value=1.2 Score=39.75 Aligned_cols=136 Identities=13% Similarity=0.097 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHhhccccC----CCcHHHHHHHHHHHhhhh
Q 016076 16 PALMMVVVQVAFAGVNIFYKLAAN-DGMSLRVIIAYRLIFATVLMFPLALILERNCRS----KLNWKILFLGFLSGLFGG 90 (395)
Q Consensus 16 g~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~ 90 (395)
|++.|...++.-+..-+..|.-.+ ++..-+...++.-+.+.++++.+....+.+... .++.......+..|+...
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 444444444444443334443322 245678889999999999988887765433221 234455556677777775
Q ss_pred hhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 91 SLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 91 ~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.-.++--++++.++.+..+++-.+.-.-.++.+.++++|+.++.. +.++++++....+-..
T Consensus 236 -giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~s------i~sillGflsg~iYav 296 (309)
T COG5070 236 -GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLS------IFSILLGFLSGAIYAV 296 (309)
T ss_pred -hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHH------HHHHHHHHHHHHHHHH
Confidence 666778889999999999999999888899999999999999995 9999998887666543
No 109
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=89.55 E-value=2.1 Score=39.48 Aligned_cols=141 Identities=18% Similarity=0.132 Sum_probs=98.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHhhc--cc---cCCCcHHHHHHHHHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAN-DGMSLRVIIAYRLIFATVLMFPLALILER--NC---RSKLNWKILFLGFLSG 86 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~g 86 (395)
+..|+.++-.+.+.-+...-+-..... ++-+..+++++...++.++++........ +. ..+.+++.+...++.+
T Consensus 188 ~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s 267 (367)
T KOG1582|consen 188 NLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFS 267 (367)
T ss_pred ceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHH
Confidence 356666666665555555544433333 23556778888888888877766554332 11 1234667777777777
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhc
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYK 160 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~ 160 (395)
..+. ++......=++.-++..++.+...--.+|.+++++++.++++.+. ..+.++.+.|+.+=.+++
T Consensus 268 ~~gy-lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy------~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 268 LAGY-LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQY------VWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhH-hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHH------hhhhHHHHHHHHhhcccC
Confidence 7775 666666666667788888888777788999999999999999997 888888899999876643
No 110
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=87.98 E-value=2.4 Score=39.30 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=58.6
Q ss_pred hhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeec
Q 016076 274 ASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 274 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
+-..+..+.+.++..++++...++.-.-.+|+.+++.-+++..++..+|+|+..+.+|++.+-..
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 45567778888999999999999999999999999999999999999999999999998887543
No 111
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=87.34 E-value=35 Score=34.44 Aligned_cols=22 Identities=5% Similarity=0.258 Sum_probs=18.3
Q ss_pred cchhhhhhHHHHhhhhheeeec
Q 016076 317 LHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 317 ~~~~~~~G~~li~~G~~l~~~~ 338 (395)
++..|++...++++|++++.+.
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~ 275 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILA 275 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999998777554
No 112
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=87.04 E-value=2.3 Score=40.63 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=88.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH--hcCCc-ccccccchhhHHHHHHHH
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALC--MEKNW-DQWKLGWNIRLVTVAYSG 271 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~g 271 (395)
.-..|+++-.+++++.+.+.+-.||..+- + ++.......+-..+..|.... ..++. +.....+...+....+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk~W--s-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVKGW--S-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcCCc--c-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 45689999999999999999988887432 2 444444443333344443332 22332 223333334566667777
Q ss_pred HhhhhHHHHHHHHHHhcCCceee-eechhHHHHHHHHHHHHHhcc-------ccchhhhhhHHHHhhhhheeeec
Q 016076 272 IVASGFMVTLISWCVRVKGPLFA-SVFSPMMLVVVALAASLILDE-------MLHLGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 272 ~~~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~a~i~~~l~~ge-------~~~~~~~~G~~li~~G~~l~~~~ 338 (395)
++- +++-..+-.++|+++.+.. ++..-+.-++..++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 81 ~lW-GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 81 VLW-GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred HHH-hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 754 5677778899999987543 344555666666665555432 22346789999999999988654
No 113
>PRK02237 hypothetical protein; Provisional
Probab=85.01 E-value=7 Score=30.76 Aligned_cols=55 Identities=11% Similarity=0.081 Sum_probs=42.2
Q ss_pred HHHhhc-cChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 98 VESLVL-TSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 98 ~~al~~-~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
...++- ...+.+..-+. ...+...+-.+.+-++|+++.+ ++|..++++|+.++.+
T Consensus 49 llTl~p~~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D------~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 49 LLTLQPDAAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWD------WIGAAICLVGMAVIMY 105 (109)
T ss_pred HHhcCCchhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhH------HHhHHHHHHhHHHhee
Confidence 333443 34555555554 6677777889999999999998 9999999999998865
No 114
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=84.08 E-value=26 Score=34.26 Aligned_cols=20 Identities=10% Similarity=-0.149 Sum_probs=8.1
Q ss_pred HHHHHHHHHhhhhHHHHHHH
Q 016076 264 LVTVAYSGIVASGFMVTLIS 283 (395)
Q Consensus 264 ~~~~~~~g~~~~~~~~~l~~ 283 (395)
++.+...+++..++++.+..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~ 81 (385)
T PF03547_consen 62 LWFIPVFAFIIFILGLLLGF 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 33343333334444444433
No 115
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=81.56 E-value=5 Score=31.35 Aligned_cols=115 Identities=15% Similarity=0.145 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcCCc-chHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHH
Q 016076 203 ALGSCFSYALWLIIQAKLSEEYPCQ-YSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTL 281 (395)
Q Consensus 203 ~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l 281 (395)
.+..++.|+..+.+.|+-......- .+...++...--.-.+. ..| ..+...+. .-.+..+
T Consensus 8 lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~---------l~w-----~Y~iPFll-----NqcgSal 68 (125)
T KOG4831|consen 8 LVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLF---------LNW-----EYLIPFLL-----NQCGSAL 68 (125)
T ss_pred HHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHH---------HhH-----HHHHHHHH-----HHhhHHH
Confidence 3566788999999999877654310 11122222111110000 011 12222211 2335566
Q ss_pred HHHHHhcCCceeeeec-hhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 282 ISWCVRVKGPLFASVF-SPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 282 ~~~a~~~~~~~~~s~~-~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
++.-+.+.+.+.+..+ ..+...++.+.+..+-.|...-..++|..++++|+.+..
T Consensus 69 y~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 69 YYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 7777888888877776 556888999999775555667778999999999987753
No 116
>PRK02237 hypothetical protein; Provisional
Probab=81.51 E-value=4.7 Score=31.72 Aligned_cols=47 Identities=9% Similarity=0.128 Sum_probs=39.4
Q ss_pred eeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCc
Q 016076 294 ASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 294 ~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~ 340 (395)
.+..+-.-.+.+.++.+.+-|.+|+...++|.++.++|+.+..+..+
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 44556667788899999999999999999999999999887766543
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.37 E-value=2.3 Score=33.32 Aligned_cols=46 Identities=15% Similarity=0.235 Sum_probs=38.2
Q ss_pred eechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCc
Q 016076 295 SVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 295 s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~ 340 (395)
+...-.-.+.+.++++.+-+++|+...++|..+.++|+.+..+.+|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 3444555678889999999999999999999999999988877653
No 118
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=80.25 E-value=19 Score=28.37 Aligned_cols=55 Identities=9% Similarity=0.116 Sum_probs=43.9
Q ss_pred HHHhhccChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 98 VESLVLTSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 98 ~~al~~~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
...++-.+.+.+..-+. ...+...+-.+.+-++|+++.+ ++|..++++|+.++.+
T Consensus 48 l~Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D------~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 48 LLTLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWD------WIGAAICLVGVAIILF 103 (107)
T ss_pred HhhcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHH------HHhHHHHHHhHHheEe
Confidence 33455555566665554 7778888889999999999998 9999999999999875
No 119
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=79.54 E-value=1.2 Score=41.66 Aligned_cols=130 Identities=11% Similarity=0.023 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhcCCc-----------ccccccchhhHHHHHHHHH
Q 016076 204 LGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCMEKNW-----------DQWKLGWNIRLVTVAYSGI 272 (395)
Q Consensus 204 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~ 272 (395)
+++.+||+-+-..+|-..++...| ..+.|-+.++.++..++..++.... .+....++..+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 456778888777776665543221 2244444444444444443331110 1111122223333333344
Q ss_pred hhhhHHHHHHHHHHhcCCceeeeechh-HHHHHHHHHHHHHhccccc--hhhhhhHHHHhhhhheee
Q 016076 273 VASGFMVTLISWCVRVKGPLFASVFSP-MMLVVVALAASLILDEMLH--LGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 273 ~~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pv~a~i~~~l~~ge~~~--~~~~~G~~li~~G~~l~~ 336 (395)
..-++..+..+++...+.++.-++.. +..+++.++.|+ ++.+.+ ..-+.|++++++++++-.
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 45678888999999988887776642 333444555543 344443 345678888888877653
No 120
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=79.50 E-value=72 Score=31.99 Aligned_cols=60 Identities=7% Similarity=-0.079 Sum_probs=36.3
Q ss_pred HHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCccc
Q 016076 270 SGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKGKE 342 (395)
Q Consensus 270 ~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~~~ 342 (395)
.+++..-..|..| .|+...+...-... -.--+..-++..++|.++.++.+.....+...+
T Consensus 249 ssvv~~Y~~yL~~-SAlss~P~~~CNp~------------~~~~~~~~~~~~iig~i~~~~~v~yss~ra~~~ 308 (429)
T PF03348_consen 249 SSVVSLYTTYLTW-SALSSEPDKECNPS------------GSRSGSWNTWQSIIGLIFTFVSVLYSSFRASSS 308 (429)
T ss_pred HHHHHHHHHHHHH-HHHHcCCCcccCCc------------ccccCCcchHHHHHHHHHHHHHHHHhccccccc
Confidence 3444444455545 57777775554444 011233456778999999999988877665433
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=75.48 E-value=30 Score=27.18 Aligned_cols=47 Identities=13% Similarity=-0.036 Sum_probs=31.7
Q ss_pred cChhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 016076 104 TSATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 104 ~~~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
.++++--+++= .+-.+.+.++.+++||++++.. +.|.++.+.++.++
T Consensus 59 ~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~------l~af~~i~~av~fi 106 (108)
T PF04342_consen 59 FSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNY------LWAFLCILGAVYFI 106 (108)
T ss_pred cCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHH------HHHHHHHHHhhhee
Confidence 34444445543 4445567788899999999995 88877776666543
No 122
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=75.47 E-value=0.9 Score=41.83 Aligned_cols=15 Identities=13% Similarity=0.379 Sum_probs=0.0
Q ss_pred CCcchhHHHHHHHHH
Q 016076 193 TGKRLLGSLLALGSC 207 (395)
Q Consensus 193 ~~~~~~G~~~~l~a~ 207 (395)
.+....|+++.++.+
T Consensus 102 GQ~LF~Gi~~l~l~~ 116 (381)
T PF05297_consen 102 GQTLFVGIVILFLCC 116 (381)
T ss_dssp ---------------
T ss_pred ccHHHHHHHHHHHHH
Confidence 445556666554443
No 123
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=75.16 E-value=5.4 Score=36.96 Aligned_cols=142 Identities=23% Similarity=0.166 Sum_probs=97.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHHhhc----cccCCC-cHHHHHHHHHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAND-GMSLRVIIAYRLIFATVLMFPLALILER----NCRSKL-NWKILFLGFLSG 86 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~g 86 (395)
...|+++.+.+.+.-+...+..|..... +=.-+.++++..+.+.++++|+..+.+. ...+.. .++-|..+.+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 4688999999999999999999965443 2225788999999999999998776542 222333 566677777777
Q ss_pred hhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcc
Q 016076 87 LFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKG 161 (395)
Q Consensus 87 ~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g 161 (395)
+++..+++.. .+=++-++|-.-.+=..--...-.++++.+++|..+... |-+.++.+.|-.+-.+.++
T Consensus 263 lfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lw------wtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 263 LFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLW------WTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhhe------eeeeEEEEehhHHHHHHHH
Confidence 7775443322 223444555433333333445567788999999988885 8898989899887766543
No 124
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=69.49 E-value=82 Score=27.97 Aligned_cols=30 Identities=3% Similarity=-0.079 Sum_probs=13.2
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHhhccChhH
Q 016076 78 ILFLGFLSGLFGGSLSQNLFVESLVLTSATF 108 (395)
Q Consensus 78 ~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 108 (395)
.++..++.++... +.+...+.....+++..
T Consensus 145 ~~~k~~~~~~~~~-~~w~~~~~~~~~lp~~i 174 (206)
T PF06570_consen 145 SWWKYILISVLAM-VLWIVIFVLTSFLPPVI 174 (206)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHccccC
Confidence 3334444444443 34444444444455553
No 125
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=69.49 E-value=5.9 Score=31.01 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=27.5
Q ss_pred HHHHHHHHHhccccchhhhhhHHHHhhhhheee
Q 016076 304 VVALAASLILDEMLHLGSLLGATLIVCGLYAVL 336 (395)
Q Consensus 304 ~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~ 336 (395)
+-..+++++++|++++..+.|.++++++++...
T Consensus 75 vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 75 VFAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred eeHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 334677889999999999999999999877653
No 126
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=68.46 E-value=18 Score=28.29 Aligned_cols=47 Identities=11% Similarity=0.167 Sum_probs=39.8
Q ss_pred eeechhHHHHHHHHHHHHHhccccchhhhhhHHHHhhhhheeeecCc
Q 016076 294 ASVFSPMMLVVVALAASLILDEMLHLGSLLGATLIVCGLYAVLWGKG 340 (395)
Q Consensus 294 ~s~~~~~~pv~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~~~~ 340 (395)
.+..+-+-.+.+.++.+++-+..|+...+.|..+.++|+.+..+..+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34556677788899999999999999999999999999888877654
No 127
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=68.07 E-value=56 Score=30.56 Aligned_cols=135 Identities=13% Similarity=0.134 Sum_probs=88.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHHHH--------hhccc--cCCC---cHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIFYKLAAND-GMSLRVIIAYRLIFATVLMFPLALI--------LERNC--RSKL---NWKI 78 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~--------~~~~~--~~~~---~~~~ 78 (395)
...|+.+...+.+.-+.+.+.-....+. |-++-+..|+-.....+.++.+.-- ...+. .+.. -+..
T Consensus 162 w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~ 241 (330)
T KOG1583|consen 162 WLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSM 241 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHH
Confidence 4678888888888888888888777664 7789999999999988877654210 00000 0111 1233
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHhhc----cChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHH
Q 016076 79 LFLGFLSGLFGGSLSQNLFVESLVL----TSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAM 154 (395)
Q Consensus 79 ~~~~~~~g~~~~~~~~~~~~~al~~----~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~ 154 (395)
|..++.-- +.++....+.-. ++.-+++++..+==.+..+++.+.++.++++.. |+|..+.++|..
T Consensus 242 ~~yLl~n~-----L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h------~lGa~lVF~Gt~ 310 (330)
T KOG1583|consen 242 WVYLLFNV-----LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH------WLGAALVFFGTL 310 (330)
T ss_pred HHHHHHHH-----HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH------HHHHHHHHHHHH
Confidence 33333222 333332222222 233344455566677889999999999999997 999999999998
Q ss_pred HHhh
Q 016076 155 LLTL 158 (395)
Q Consensus 155 li~~ 158 (395)
+...
T Consensus 311 ~fa~ 314 (330)
T KOG1583|consen 311 LFAN 314 (330)
T ss_pred HHHH
Confidence 8764
No 128
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=63.41 E-value=5.4 Score=36.56 Aligned_cols=135 Identities=13% Similarity=0.119 Sum_probs=81.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhh
Q 016076 12 HGLKPALMMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGS 91 (395)
Q Consensus 12 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 91 (395)
+..+|=+++++++.+++.++..-.+..++ .|-.++...-.+++.++...= .+..++....+.|..-....+...+.+.
T Consensus 163 np~~GD~lvi~GATlYaVSNv~EEflvkn-~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i~~yl~f~L~MF 240 (336)
T KOG2766|consen 163 NPVKGDFLVIAGATLYAVSNVSEEFLVKN-ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAIFLYLRFALTMF 240 (336)
T ss_pred CCccCcEEEEecceeeeeccccHHHHHhc-CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHHHHHHHHHHHHH
Confidence 45788889999999999999999988885 999998888888888776665 4444444444444322222222222222
Q ss_pred hHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 016076 92 LSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 92 ~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
+.+.+.=.=++..+++...+-.-++-.+..++ ..++-+..|.- .++......|.++-
T Consensus 241 llYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY------~laF~~i~~GliiY 297 (336)
T KOG2766|consen 241 LLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLY------FLAFATIATGLIIY 297 (336)
T ss_pred HHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhh------HHHHHHHHHhhEEe
Confidence 22222222233334433333333445555555 45566688885 77777777777665
No 129
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=60.47 E-value=14 Score=28.51 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhccccchhhhhhHHHHhhhhheeee
Q 016076 303 VVVALAASLILDEMLHLGSLLGATLIVCGLYAVLW 337 (395)
Q Consensus 303 v~a~i~~~l~~ge~~~~~~~~G~~li~~G~~l~~~ 337 (395)
.+-..++++.++|++.+-.+.|..++.+|+++..+
T Consensus 81 ~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 81 AIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 33456788999999999999999999999887643
No 130
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=58.58 E-value=1.2e+02 Score=25.96 Aligned_cols=57 Identities=16% Similarity=0.377 Sum_probs=41.6
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHhhhh-----cCCcchHHHHHHHHHHHHHHHHHHH
Q 016076 192 DTGKRLLGSLLALGSCFSYALWLIIQAKLSEE-----YPCQYSSTALMCVMGAIQAVAFALC 248 (395)
Q Consensus 192 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (395)
+..+.....+.++.+++.|++..++..-+.++ .|.|..-..+.++.+.+.++.+.-+
T Consensus 126 ~~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaFmgF 187 (193)
T COG4657 126 EGHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAFMGF 187 (193)
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHHcCc
Confidence 45567778889999999999988887666654 4566777777777777776665533
No 131
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=56.14 E-value=28 Score=27.23 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=37.4
Q ss_pred hhHHHHhhh-hhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhh
Q 016076 106 ATFASAMFN-LIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTL 158 (395)
Q Consensus 106 ~~~a~~i~~-~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~ 158 (395)
.+.+..-+. ...+...+-.+++-+.++++.+ ++|..++++|+.++.+
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D------~~Ga~icl~G~~vil~ 104 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRYD------WIGAAICLAGVAVILF 104 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHHH------hhhHHHHHhceeeeEe
Confidence 444444443 6677777888889999999998 9999999999888875
No 132
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=55.76 E-value=2.5e+02 Score=28.83 Aligned_cols=27 Identities=7% Similarity=0.108 Sum_probs=16.1
Q ss_pred cchhhhhhHHHHhhhhheeeecCcccc
Q 016076 317 LHLGSLLGATLIVCGLYAVLWGKGKEM 343 (395)
Q Consensus 317 ~~~~~~~G~~li~~G~~l~~~~~~~~~ 343 (395)
.....|-....++.=+++..|++..+.
T Consensus 420 v~~a~W~~l~~~iLvvI~~LWrPS~nn 446 (518)
T KOG2568|consen 420 VDTAFWPLLFFLILVVIMFLWRPSQNN 446 (518)
T ss_pred hhhccHHHHHHHHHHHHHHhcCCCCCC
Confidence 333445556666666677778765543
No 133
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=53.40 E-value=1.5e+02 Score=28.25 Aligned_cols=78 Identities=15% Similarity=0.122 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHH-------HHH
Q 016076 143 LLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYAL-------WLI 215 (395)
Q Consensus 143 ~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~-------~~v 215 (395)
+.+..++..|+..+...- + .........+.++..++.+.|.. ..+
T Consensus 7 ~f~~~mGtg~l~~~~~~~-~---------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~ 58 (330)
T PF03595_consen 7 WFGMVMGTGGLSNLLYLL-P---------------------------YHFGGLAILSEVLFILALILFLVLLVLYLLRWI 58 (330)
T ss_dssp GGHHHHHHHHHHHHHHTT-T---------------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-H---------------------------HhccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999988888876411 0 22344556677777777766666 222
Q ss_pred H-HHHhhhhcCCcchHHHHHHHHHHHHHHHHHHH
Q 016076 216 I-QAKLSEEYPCQYSSTALMCVMGAIQAVAFALC 248 (395)
Q Consensus 216 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 248 (395)
. -|+..++..+|....++.+...+...+.....
T Consensus 59 ~~~~~~~~el~~p~~~~f~~t~~m~~~~l~~~~~ 92 (330)
T PF03595_consen 59 RYPKAFKAELRHPVRSSFFPTFPMALMLLAAFIS 92 (330)
T ss_dssp H-HHHHHHHHHSTTGGGGGGHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHH
Confidence 2 23334444577777777777666666555543
No 134
>PRK12650 putative monovalent cation/H+ antiporter subunit A; Reviewed
Probab=51.61 E-value=3.9e+02 Score=29.94 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhh
Q 016076 77 KILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNL 115 (395)
Q Consensus 77 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~ 115 (395)
++....+..|+.+. ...+.+.-+.--+.+.+++..-+
T Consensus 620 ~rl~av~~~g~~G~--~~al~f~~~~APDvAlTq~~Vet 656 (962)
T PRK12650 620 TRLAAVVLVGVVGV--GVTLQMLTLGAPDVALTQLLVEA 656 (962)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHhCCcHHHHHHHHHHH
Confidence 44555666777774 33333333433445555554444
No 135
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=50.28 E-value=3.1e+02 Score=28.31 Aligned_cols=15 Identities=20% Similarity=-0.181 Sum_probs=7.7
Q ss_pred hhHHHHHHHHHHHHH
Q 016076 298 SPMMLVVVALAASLI 312 (395)
Q Consensus 298 ~~~~pv~a~i~~~l~ 312 (395)
....|+-+.++|.+.
T Consensus 353 ~g~~~lGsll~G~la 367 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHHHHHH
Confidence 334455556666443
No 136
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=48.57 E-value=3.5e+02 Score=28.48 Aligned_cols=21 Identities=5% Similarity=-0.070 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHH
Q 016076 13 GLKPALMMVVVQVAFAGVNIF 33 (395)
Q Consensus 13 ~~~g~l~~l~~~~~~~~~~~~ 33 (395)
...|.++...+..++-.-...
T Consensus 240 D~IG~~L~~~Gl~LfLlgl~w 260 (599)
T PF06609_consen 240 DWIGIFLFIAGLALFLLGLSW 260 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHhc
Confidence 356777776666555444433
No 137
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=45.96 E-value=2.1e+02 Score=25.24 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=23.0
Q ss_pred HHHHHHHhccccchhhhhhHHHHh--hhhheeeec
Q 016076 306 ALAASLILDEMLHLGSLLGATLIV--CGLYAVLWG 338 (395)
Q Consensus 306 ~i~~~l~~ge~~~~~~~~G~~li~--~G~~l~~~~ 338 (395)
-.+|..++.+..=+.+..|..|.+ .|.+...++
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~~ 167 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLARR 167 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 445777888888888888888765 455555443
No 138
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=39.06 E-value=3.4e+02 Score=25.68 Aligned_cols=25 Identities=32% Similarity=0.298 Sum_probs=14.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhcC
Q 016076 227 QYSSTALMCVMGAIQAVAFALCMEK 251 (395)
Q Consensus 227 ~~~~~~~~~~~~~i~~~~~~~~~~~ 251 (395)
|-..+......+.+..+..+....+
T Consensus 119 ~~~~tlv~lgig~i~Ali~a~~itk 143 (308)
T PF06166_consen 119 PKNGTLVGLGIGAIVALIVALIITK 143 (308)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhC
Confidence 3445555666666666666655433
No 139
>PF15102 TMEM154: TMEM154 protein family
Probab=39.02 E-value=34 Score=28.59 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=12.9
Q ss_pred hhhHHHHhhhhheeeecCcccccc
Q 016076 322 LLGATLIVCGLYAVLWGKGKEMKN 345 (395)
Q Consensus 322 ~~G~~li~~G~~l~~~~~~~~~~~ 345 (395)
+++++|++..++++.+.|+|+.|.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 344445555566666655555543
No 140
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=30.74 E-value=7.3e+02 Score=27.00 Aligned_cols=45 Identities=20% Similarity=0.132 Sum_probs=28.6
Q ss_pred hhHHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHH
Q 016076 106 ATFASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLL 156 (395)
Q Consensus 106 ~~~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li 156 (395)
.+.+.++..+.|+-.+.++.....+|.+... +.+.+-.++|.+-+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~------~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKA------FFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchH------HHHHHHHHHHHHHh
Confidence 3456778889999999888887766643332 44444444554433
No 141
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=30.45 E-value=2.6e+02 Score=21.72 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=26.3
Q ss_pred HHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHh
Q 016076 118 AVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLT 157 (395)
Q Consensus 118 i~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~ 157 (395)
.+-+.++.+.+||++++.. +.+..+...|+.++.
T Consensus 81 ~iFv~Fsvfyl~epl~~~~------l~a~~~i~gav~fiF 114 (116)
T COG3169 81 AIFVPFSVFYLKEPLRWNY------LWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHHHcCcchHHH------HHHHHHHHHHHHHhc
Confidence 3446678999999999995 888777777777653
No 142
>PF15471 TMEM171: Transmembrane protein family 171
Probab=27.91 E-value=1.4e+02 Score=27.76 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=15.8
Q ss_pred hhhhhhHHHHhhhhheeeec
Q 016076 319 LGSLLGATLIVCGLYAVLWG 338 (395)
Q Consensus 319 ~~~~~G~~li~~G~~l~~~~ 338 (395)
-.|++|-.+++.|.+.....
T Consensus 161 slQImGPlIVl~GLCFFVVA 180 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVA 180 (319)
T ss_pred ehhhhhhHHHHHhhhhhhee
Confidence 36889999999998777544
No 143
>PF11381 DUF3185: Protein of unknown function (DUF3185); InterPro: IPR021521 Some members in this bacterial family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=26.80 E-value=50 Score=23.07 Aligned_cols=18 Identities=28% Similarity=0.501 Sum_probs=15.3
Q ss_pred cchhHHHHHHHHHHHhhh
Q 016076 142 KLLGTLIGISGAMLLTLY 159 (395)
Q Consensus 142 q~~g~~l~~~Gv~li~~~ 159 (395)
|++|+++.+.|+.++.+.
T Consensus 1 kiigi~Llv~GivLl~~G 18 (59)
T PF11381_consen 1 KIIGIALLVGGIVLLYFG 18 (59)
T ss_pred CeeeehHHHHHHHHHHhh
Confidence 478999999999998773
No 144
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=26.41 E-value=23 Score=29.45 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=17.2
Q ss_pred HhcCCceeeeechhHHHHHHHHHHHHH
Q 016076 286 VRVKGPLFASVFSPMMLVVVALAASLI 312 (395)
Q Consensus 286 ~~~~~~~~~s~~~~~~pv~a~i~~~l~ 312 (395)
+...+....+.+.|+.|+++++++.++
T Consensus 69 i~EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 69 IEEKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556667777787777766554
No 145
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=25.59 E-value=7.3e+02 Score=25.30 Aligned_cols=15 Identities=7% Similarity=0.127 Sum_probs=7.2
Q ss_pred CcchHHHHHHHHHHH
Q 016076 226 CQYSSTALMCVMGAI 240 (395)
Q Consensus 226 ~~~~~~~~~~~~~~i 240 (395)
.|......+.....+
T Consensus 330 ~P~~a~~~~~~i~~l 344 (507)
T TIGR00910 330 VPVPLVIIQGIITSI 344 (507)
T ss_pred CcHHHHHHHHHHHHH
Confidence 455455455444443
No 146
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=24.52 E-value=3.3e+02 Score=25.05 Aligned_cols=206 Identities=13% Similarity=0.023 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccccCCCCCccccccccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhcC
Q 016076 146 TLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVPLQSSDTGKRLLGSLLALGSCFSYALWLIIQAKLSEEYP 225 (395)
Q Consensus 146 ~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~ 225 (395)
++.-++|+++....+--. .....-..-|..+++.+.+...++... |.+.++
T Consensus 14 ~~~~v~Gi~Lf~~A~~LS--------------------------~s~~FyY~sg~~lGv~~s~li~~~~~~-k~lPrk-- 64 (249)
T PF10225_consen 14 VAQFVLGIVLFFLAPSLS--------------------------RSVLFYYSSGISLGVLASLLILLFQLS-KLLPRK-- 64 (249)
T ss_pred HHHHHHHHHHHHHhHHhc--------------------------cChhHHHhhhHHHHHHHHHHHHHHHHH-HHccCc--
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhcCCcccccccchhhHHHHHHHHHhhhhHHHHHHHHHHhcCCceeeeechhHHHHHH
Q 016076 226 CQYSSTALMCVMGAIQAVAFALCMEKNWDQWKLGWNIRLVTVAYSGIVASGFMVTLISWCVRVKGPLFASVFSPMMLVVV 305 (395)
Q Consensus 226 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~a 305 (395)
+.......... .+....+-...+.-...+.......++.++..|. .-...+.++.++........++=.+-
T Consensus 65 -~~~~~~l~gg~-~~~~y~l~~~~~nl~~il~~~~~~v~~yv~~~G~-------vsf~vcy~~gp~~~~rs~~~v~W~Lq 135 (249)
T PF10225_consen 65 -SMFYAVLYGGW-SFGLYFLQQLWENLQSILEEYRIYVLGYVLVVGL-------VSFAVCYRYGPPVDPRSRNFVKWALQ 135 (249)
T ss_pred -chhHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhhcccCCCccHhHHHHHHHHHH
Q ss_pred HHHHHHHhccccchhhhhhHHHHhhh----hheeeecCccccccccccCCCCCCCCCCCceeEeecCCCCccccccccCC
Q 016076 306 ALAASLILDEMLHLGSLLGATLIVCG----LYAVLWGKGKEMKNVKQLAPDAKTSKDSEPIKIVIGSPIDDSRHREEDHI 381 (395)
Q Consensus 306 ~i~~~l~~ge~~~~~~~~G~~li~~G----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (395)
++-..+++.-.-+...-.++++.... .....+.+...++-++.... ++..+...++|...-....-.+.-++-.-
T Consensus 136 ligl~lI~~ss~~~~~a~~~i~~~l~~~~l~~~~~~~~~~~~~~~~~~~~-p~~rr~LteeEy~~q~~~eT~kaL~eLr~ 214 (249)
T PF10225_consen 136 LIGLVLIYFSSQDPEFAFAAIILLLLWKSLYYPISWLKRVRRKYRRRFTS-PPKRRLLTEEEYEEQGERETRKALEELRE 214 (249)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhheecC-CCccccccccchhhcchHhHHHHHHHHHH
Q ss_pred CCCCCccCC
Q 016076 382 FPKENKRNS 390 (395)
Q Consensus 382 ~~~~~~~~~ 390 (395)
.-++|+.++
T Consensus 215 ~c~sp~~~~ 223 (249)
T PF10225_consen 215 YCNSPDCNS 223 (249)
T ss_pred HhCCCCCCc
No 147
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=23.72 E-value=3.9e+02 Score=23.44 Aligned_cols=72 Identities=17% Similarity=0.063 Sum_probs=40.4
Q ss_pred HHHHhhhhhHHHHHHHHHHhcccccccccccccccchhHHHHHHHHHHHhhhcccccccccccccccccCCCCCcccccc
Q 016076 108 FASAMFNLIPAVTFVLATSIGLEKLGIRTRAGKAKLLGTLIGISGAMLLTLYKGVEIKIWSTHVDLLHHAGGGGHVASVP 187 (395)
Q Consensus 108 ~a~~i~~~~Pi~~~lla~~~l~e~~~~~~~~~~~q~~g~~l~~~Gv~li~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (395)
..+++....-....+.-.+.-||+++.- +.|.+...++..+... .|
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~a-------~~gl~gV~i~a~~A~~-tG-------------------------- 73 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQPA-------LSGLFGVAISAAIAWR-TG-------------------------- 73 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHHH-------HHHHHHHHHHHHHHHH-HC--------------------------
Confidence 3444445444455566677777877654 5555555555444333 22
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 016076 188 LQSSDTGKRLLGSLLALGSCFSYALWLII 216 (395)
Q Consensus 188 ~~~~~~~~~~~G~~~~l~a~~~~a~~~v~ 216 (395)
+..+.+..|++.-...++.+.+....
T Consensus 74 ---~A~~~Fl~gi~~n~~~~~~~l~S~lv 99 (187)
T PF11361_consen 74 ---SAKDFFLPGIWTNAVYAVVFLVSVLV 99 (187)
T ss_pred ---ChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 24556667777666666666555544
No 148
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=23.72 E-value=6e+02 Score=23.69 Aligned_cols=112 Identities=17% Similarity=0.117 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHHHhh--ccccCCC---cHHHHHHHHHHHh
Q 016076 14 LKPALMMVVVQVAFAGVNIFYKLAAN-DGMSLRVIIAYRLIFATVLMFPLALILE--RNCRSKL---NWKILFLGFLSGL 87 (395)
Q Consensus 14 ~~g~l~~l~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~g~ 87 (395)
.+|.+++++ .+|++.+.+..+.-. ..+.|-.-+.+-.+..+.+...++..++ |+.+..+ +.++|..-..++.
T Consensus 95 ing~ll~ll--~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS~ 172 (314)
T COG3965 95 INGTLLALL--CLYALINALGSLLDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSA 172 (314)
T ss_pred hccHHHHHH--HHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHHH
Confidence 344444443 356666666655432 1255555455544444444443333333 2222222 4566654443332
Q ss_pred hhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHHHHhcccc
Q 016076 88 FGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLATSIGLEK 131 (395)
Q Consensus 88 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla~~~l~e~ 131 (395)
.-+..|..+-.......+-...+.-|.+.++....+..-+
T Consensus 173 ----al~VaF~~a~~l~~T~~a~l~~Y~DPmvlaL~~~v~IplP 212 (314)
T COG3965 173 ----ALFVAFAAAWLLAGTKFAHLVVYADPMVLALVCLVFIPLP 212 (314)
T ss_pred ----HHHHHHHHHHHhccCchhhhhcccCHHHHHHHHHheeecc
Confidence 3334444444444555666777888999999988876655
No 149
>PF12292 DUF3624: Protein of unknown function (DUF3624); InterPro: IPR022072 This family of proteins is found in bacteria. Proteins in this family are approximately 90 amino acids in length. There is a conserved GRC sequence motif.
Probab=21.98 E-value=3.3e+02 Score=20.09 Aligned_cols=45 Identities=11% Similarity=0.309 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 016076 19 MMVVVQVAFAGVNIFYKLAANDGMSLRVIIAYRLIFATVLMFPLAL 64 (395)
Q Consensus 19 ~~l~~~~~~~~~~~~~k~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 64 (395)
+.+++.+.|.....+.+-.-. .+....+.+.-+.+..+.++-+..
T Consensus 25 LtvLs~~~w~iWw~~f~d~P~-sieSIALl~~~~AfsgLL~lHLvv 69 (77)
T PF12292_consen 25 LTVLSVLSWPIWWFFFRDTPT-SIESIALLFFCFAFSGLLFLHLVV 69 (77)
T ss_pred HHHHHHHHHHHHHHHHcCCcc-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777777776664322 244566666666666666555443
No 150
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=21.81 E-value=90 Score=25.67 Aligned_cols=15 Identities=20% Similarity=0.518 Sum_probs=8.5
Q ss_pred hhhhHHHHhhhhhee
Q 016076 321 SLLGATLIVCGLYAV 335 (395)
Q Consensus 321 ~~~G~~li~~G~~l~ 335 (395)
.++|..+++.|++..
T Consensus 89 ~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHH
Confidence 345666666665544
No 151
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=21.35 E-value=5.8e+02 Score=25.55 Aligned_cols=14 Identities=36% Similarity=0.745 Sum_probs=6.9
Q ss_pred hhhHHHHhhhhhee
Q 016076 322 LLGATLIVCGLYAV 335 (395)
Q Consensus 322 ~~G~~li~~G~~l~ 335 (395)
+.|+.+++++++..
T Consensus 417 ~~~~~~~i~~~~~~ 430 (476)
T PLN00028 417 LMGVMIIACTLPVA 430 (476)
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555554444
No 152
>PRK10666 ammonium transporter; Provisional
Probab=21.17 E-value=8.5e+02 Score=24.45 Aligned_cols=54 Identities=4% Similarity=-0.073 Sum_probs=26.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHh
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCM 249 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 249 (395)
......++++++++..-......|+. -+.+||......-...+.+-.+...++.
T Consensus 302 ~p~~A~iiG~vag~v~~~~~~~l~~~-~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 302 GVGGALIIGVVAGLAGLWGVTMLKRW-LRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 34445566666665554433333331 2445666555555555555544444443
No 153
>COG2323 Predicted membrane protein [Function unknown]
Probab=21.02 E-value=6.3e+02 Score=22.88 Aligned_cols=81 Identities=11% Similarity=0.095 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCcHHHHHHHHHHHhhhhhhHHHHHHHHhhccChhHHHHhhhhhHHHHHHHH
Q 016076 45 RVIIAYRLIFATVLMFPLALILERNCRSKLNWKILFLGFLSGLFGGSLSQNLFVESLVLTSATFASAMFNLIPAVTFVLA 124 (395)
Q Consensus 45 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~a~~i~~~~Pi~~~lla 124 (395)
..-.++|.++..+.++.+..+.+|+...+.+.-+....+.+|-+. +...+.. +.+...+.+...+.-++..+++
T Consensus 4 ~~~~~ir~vi~~~~l~l~~ri~Gkr~isqmt~fd~vv~i~iG~i~---~~~i~~~---~i~~~~~~~~~~~~~~l~~~l~ 77 (224)
T COG2323 4 LLEVAIRSVIGYLILLLLLRIMGKRSISQMTIFDFVVMITLGSIA---GDAIFDD---DVSILPTIIAILTLALLQILLS 77 (224)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCcCccccCCHHHHHHHHHHHHHH---HHHhhCC---CCchHHHHHHHHHHHHHHHHHH
Confidence 445789999999998888888888887777777766655555433 3333332 2344455555555666667777
Q ss_pred HHhcccc
Q 016076 125 TSIGLEK 131 (395)
Q Consensus 125 ~~~l~e~ 131 (395)
++-.|-+
T Consensus 78 ~l~~ks~ 84 (224)
T COG2323 78 YLSLKSR 84 (224)
T ss_pred HHHhccH
Confidence 7766643
No 154
>KOG0682 consensus Ammonia permease [Inorganic ion transport and metabolism]
Probab=21.00 E-value=9e+02 Score=24.70 Aligned_cols=54 Identities=9% Similarity=-0.009 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHhc
Q 016076 195 KRLLGSLLALGSCFSYALWLIIQAKLSEEYPCQYSSTALMCVMGAIQAVAFALCME 250 (395)
Q Consensus 195 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 250 (395)
.....+++++++++..-+..-+.+++ ++++|+.....--..+..-++..+++..
T Consensus 310 ~pWaAiviG~va~~~~~~~~kL~~~l--kvDDpl~~f~~Hgv~G~wG~I~~glFa~ 363 (500)
T KOG0682|consen 310 EPWAAIVIGAVAGLVCNAANKLKERL--KVDDPLDAFAVHGVGGIWGLIFTGLFAH 363 (500)
T ss_pred CcHHHHHHhHHHHHHHHHHHHHHHHh--cCCcHHHHHHHhccccchhhheeeeecc
Confidence 33445555555554444333333332 4557777777666666666666565543
No 155
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.62 E-value=5.4e+02 Score=29.80 Aligned_cols=14 Identities=29% Similarity=0.214 Sum_probs=8.0
Q ss_pred chhHHHHHHHHHHH
Q 016076 143 LLGTLIGISGAMLL 156 (395)
Q Consensus 143 ~~g~~l~~~Gv~li 156 (395)
.+++++.+++++++
T Consensus 25 ~~gIlLlllAlfL~ 38 (1355)
T PRK10263 25 ALLILIVLFAVWLM 38 (1355)
T ss_pred HHHHHHHHHHHHHH
Confidence 55666666665554
No 156
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=20.43 E-value=6e+02 Score=22.39 Aligned_cols=14 Identities=21% Similarity=0.323 Sum_probs=7.1
Q ss_pred chhHHHHHHHHHHH
Q 016076 143 LLGTLIGISGAMLL 156 (395)
Q Consensus 143 ~~g~~l~~~Gv~li 156 (395)
+.++...+.|++..
T Consensus 89 ~~~if~~~~gi~~~ 102 (206)
T PF06570_consen 89 FFGIFSLLFGIMGF 102 (206)
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555555543
No 157
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=20.08 E-value=5.1e+02 Score=21.51 Aligned_cols=31 Identities=6% Similarity=0.125 Sum_probs=25.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHhhhh
Q 016076 193 TGKRLLGSLLALGSCFSYALWLIIQAKLSEE 223 (395)
Q Consensus 193 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 223 (395)
+.......+..++++..|.-|...+||..+.
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 4455678899999999999999999887654
Done!