Query 016080
Match_columns 395
No_of_seqs 154 out of 253
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 07:32:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016080.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016080hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vf6c_ a.194.1.1 (C:) Maguk p 31.7 11 0.00082 25.6 2.0 18 366-383 29-46 (51)
2 d1h5oa_ g.9.1.2 (A:) Crotamine 15.7 27 0.0019 22.6 1.2 10 87-96 14-23 (42)
3 d1unda_ a.14.1.1 (A:) Advillin 11.5 24 0.0018 22.5 0.1 12 281-292 4-15 (36)
4 d1yu8x1 a.14.1.1 (X:42-76) Vil 11.4 25 0.0018 22.3 0.1 12 281-292 3-14 (35)
5 d1zkea1 a.30.6.1 (A:1-79) Hypo 10.6 37 0.0027 25.0 0.8 15 57-71 63-77 (79)
6 d1xrda1 f.3.1.1 (A:1-52) Light 10.6 59 0.0043 22.2 1.9 14 157-170 14-27 (52)
7 d1q1ha_ a.4.5.41 (A:) Transcri 10.0 26 0.0019 26.5 -0.2 9 307-315 73-81 (88)
8 d2axtl1 f.23.31.1 (L:1-37) Pho 8.8 97 0.007 19.5 2.2 13 162-174 22-34 (37)
9 d1iwga8 f.35.1.1 (A:513-566,A: 8.7 2.4E+02 0.017 23.1 5.7 57 25-81 110-178 (222)
10 d1ep3a_ c.1.4.1 (A:) Dihydroor 8.7 1.3E+02 0.0096 25.4 4.0 31 38-68 278-308 (311)
No 1
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.68 E-value=11 Score=25.58 Aligned_cols=18 Identities=44% Similarity=0.683 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHHhhHHH
Q 016080 366 ELMLSLIHFILFQNAFEL 383 (395)
Q Consensus 366 ~llL~LIhfiLFQNAFel 383 (395)
.++|.|.|=.=|||||-|
T Consensus 29 ~l~lqLvqn~DFQnAfkI 46 (51)
T d1vf6c_ 29 SLLLQLVQNRDFQNAFKI 46 (51)
T ss_dssp HHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH
Confidence 589999999999999986
No 2
>d1h5oa_ g.9.1.2 (A:) Crotamine {South american rattlesnake (Crotalus durissus terrificus) [TaxId: 8732]}
Probab=15.68 E-value=27 Score=22.61 Aligned_cols=10 Identities=30% Similarity=0.750 Sum_probs=7.9
Q ss_pred ccccccCCcc
Q 016080 87 ISNICIPSKF 96 (395)
Q Consensus 87 IskICIp~~~ 96 (395)
-.+||+|+|.
T Consensus 14 k~~iclppss 23 (42)
T d1h5oa_ 14 KEKICLPPSS 23 (42)
T ss_dssp TTSCCSSSSC
T ss_pred cceeECCCcc
Confidence 3589999983
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.53 E-value=24 Score=22.47 Aligned_cols=12 Identities=25% Similarity=0.742 Sum_probs=10.7
Q ss_pred Hhhcchhcccch
Q 016080 281 EEEFQRIVGVSG 292 (395)
Q Consensus 281 E~DFk~VVGIS~ 292 (395)
++||..|.|+|.
T Consensus 4 d~dF~~vFgmsr 15 (36)
T d1unda_ 4 EQDFVSVFGITR 15 (36)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCcCH
Confidence 689999999986
No 4
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=11.43 E-value=25 Score=22.31 Aligned_cols=12 Identities=25% Similarity=0.800 Sum_probs=10.6
Q ss_pred Hhhcchhcccch
Q 016080 281 EEEFQRIVGVSG 292 (395)
Q Consensus 281 E~DFk~VVGIS~ 292 (395)
++||..|.|+|.
T Consensus 3 d~dF~~vfgmsr 14 (35)
T d1yu8x1 3 DEDFKAVFGMTR 14 (35)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCCCH
Confidence 689999999985
No 5
>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531 {Helicobacter pylori [TaxId: 210]}
Probab=10.65 E-value=37 Score=24.96 Aligned_cols=15 Identities=33% Similarity=0.649 Sum_probs=12.9
Q ss_pred chHHHHHHHHHHHHH
Q 016080 57 KPLLAAVEKMKEEMM 71 (395)
Q Consensus 57 kaL~eALeKiK~ELM 71 (395)
|+..+||.|+|.|+.
T Consensus 63 K~~IdaLNKiKke~l 77 (79)
T d1zkea1 63 KELINALNKIKKGLL 77 (79)
T ss_dssp HHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHh
Confidence 668999999999974
No 6
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=10.59 E-value=59 Score=22.22 Aligned_cols=14 Identities=43% Similarity=0.714 Sum_probs=11.0
Q ss_pred hhhHHHHHHHHHHH
Q 016080 157 LEQLHRFIFVMAVT 170 (395)
Q Consensus 157 lhQLHiFIFVLAv~ 170 (395)
+--+|.|.|+||++
T Consensus 14 lva~~~fL~~LAl~ 27 (52)
T d1xrda1 14 LVGLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34578999999964
No 7
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=10.02 E-value=26 Score=26.47 Aligned_cols=9 Identities=33% Similarity=1.040 Sum_probs=5.9
Q ss_pred CCCchhhhh
Q 016080 307 KGSNLYFWI 315 (395)
Q Consensus 307 ~gw~~yfW~ 315 (395)
.||++|+|-
T Consensus 73 ~gw~~Y~W~ 81 (88)
T d1q1ha_ 73 SGWFIYYWK 81 (88)
T ss_dssp CCCCEEEEE
T ss_pred CCcEEEEEE
Confidence 477777773
No 8
>d2axtl1 f.23.31.1 (L:1-37) Photosystem II reaction center protein L, PsbL {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.81 E-value=97 Score=19.53 Aligned_cols=13 Identities=38% Similarity=0.590 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHH
Q 016080 162 RFIFVMAVTHISY 174 (395)
Q Consensus 162 iFIFVLAv~HV~y 174 (395)
.+||||||.--.|
T Consensus 22 Llifvl~vLFssY 34 (37)
T d2axtl1 22 LLILVLALLFSSY 34 (37)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3899999876555
No 9
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=8.71 E-value=2.4e+02 Score=23.11 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHh--hcCCchHHHHHHHHHHHH----------HHHHHHHHHHH
Q 016080 25 SVATVLTVFVVVSLIVERSIHHLSNWLR--KTNRKPLLAAVEKMKEEM----------MLLGFISLFLT 81 (395)
Q Consensus 25 aVA~Vc~v~V~iSl~~Er~lH~lgk~Lk--k~~kkaL~eALeKiK~EL----------MLLGFISLLLt 81 (395)
.+.+....++++.+.+..++|.+..+-+ +++.++..+|..+.-+|- +++||++|.+.
T Consensus 110 ~~~~~~g~i~l~Gi~v~~~i~~~~~~~~~~~~~g~~~~~Ai~~a~~~~~~~i~~t~ltti~gf~pl~~~ 178 (222)
T d1iwga8 110 DVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVIS 178 (222)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhcccccchhhhhhhHHHHHHHHhccccccccCCHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhc
Confidence 3445566777888999999999998865 333355666665554443 36888888774
No 10
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=8.70 E-value=1.3e+02 Score=25.38 Aligned_cols=31 Identities=16% Similarity=0.348 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhhHHhhcCCchHHHHHHHHHH
Q 016080 38 LIVERSIHHLSNWLRKTNRKPLLAAVEKMKE 68 (395)
Q Consensus 38 l~~Er~lH~lgk~Lkk~~kkaL~eALeKiK~ 68 (395)
.+++++...|.+|+++++-+.+-|...|+|+
T Consensus 278 ~i~~~I~~~L~~~m~~~g~~si~e~~g~~k~ 308 (311)
T d1ep3a_ 278 FVCPKIIDKLPELMDQYRIESLESLIQEVKE 308 (311)
T ss_dssp THHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCCHHHHHHHHhc
Confidence 4578999999999999988899999999986
Done!