BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016085
(395 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/359 (61%), Positives = 261/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 25 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 82
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 83 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 142
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 143 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 202 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 261
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 262 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 321
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 322 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 379
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/359 (61%), Positives = 261/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 385
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/360 (60%), Positives = 261/360 (72%), Gaps = 39/360 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 33 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 90
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 91 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 150
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 151 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 210 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 269
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 270 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 329
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 390
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 330 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 388
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/360 (60%), Positives = 261/360 (72%), Gaps = 39/360 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 76 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 133
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 134 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 193
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 194 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 253 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 312
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 313 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 372
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 390
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 373 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 431
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/360 (60%), Positives = 261/360 (72%), Gaps = 39/360 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 35 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 92
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 93 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 152
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 153 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 212 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 271
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 272 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 331
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 390
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 332 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 390
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/359 (61%), Positives = 261/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 10 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 67
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 68 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 127
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+SYICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 187 VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 246
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 247 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 306
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 307 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 364
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/352 (62%), Positives = 257/352 (73%), Gaps = 40/352 (11%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 8 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 67
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 68 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 127
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 128 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
YICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 390
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 307 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 357
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/359 (60%), Positives = 260/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 31 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 89 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+S ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 208 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 267
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 268 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 328 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 385
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/375 (58%), Positives = 266/375 (70%), Gaps = 46/375 (12%)
Query: 51 IKGERVEKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQA 110
++G +V + D +G++ ++ T G+ Q +SY +V+G GSFG+V+QA
Sbjct: 1 MRGSKVSR-------DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQA 51
Query: 111 KCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNV------------------------ 146
K ++GE VAIKKVLQDKR+KNRELQ MR LDH N+
Sbjct: 52 KLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 111
Query: 147 -----------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPH 195
HYSRA Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P
Sbjct: 112 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPD 170
Query: 196 THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL 255
T +KLCDFGSAK LV+GEPN+S ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLL
Sbjct: 171 TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 256 GQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPE 315
GQP+FPG+SGVDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPE
Sbjct: 231 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 290
Query: 316 AVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASK 375
A+ L SRLL+Y+P R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++
Sbjct: 291 AIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNP 349
Query: 376 ELLSKLIPEHARKQC 390
L + LIP HAR Q
Sbjct: 350 PLATILIPPHARIQA 364
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 441 bits (1135), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/359 (60%), Positives = 260/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 16 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 73
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 74 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 133
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+S ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 193 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 252
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 253 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 312
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 313 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 370
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/360 (60%), Positives = 260/360 (72%), Gaps = 39/360 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 9 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 66
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 67 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 126
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+S ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 186 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 245
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 246 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 305
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQC 390
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 306 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQA 364
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 441 bits (1134), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/359 (60%), Positives = 260/359 (72%), Gaps = 39/359 (10%)
Query: 66 DGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVL 125
D +G++ ++ T G+ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVL
Sbjct: 5 DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 62
Query: 126 QDKRYKNRELQTMRLLDHPNV-----------------------------------HYSR 150
QDKR+KNRELQ MR LDH N+ HYSR
Sbjct: 63 QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 122
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL 210
A Q +P+IYVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK L
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
Query: 211 VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLV 270
V+GEPN+S ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLV
Sbjct: 182 VRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLV 241
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
EIIKVLGTPTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P
Sbjct: 242 EIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTA 301
Query: 331 RCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
R T LEAC H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 RLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 359
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 440 bits (1132), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/349 (62%), Positives = 256/349 (73%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
YICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/351 (62%), Positives = 256/351 (72%), Gaps = 40/351 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 351
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/349 (62%), Positives = 255/349 (73%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 4 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 63
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 64 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 123
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 124 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 303 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 350
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 437 bits (1124), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/349 (62%), Positives = 255/349 (73%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 437 bits (1124), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/349 (62%), Positives = 255/349 (73%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 7 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 66
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 67 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 126
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 127 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 306 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 353
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 437 bits (1124), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/349 (62%), Positives = 255/349 (73%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQDKR+KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIH-SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/349 (62%), Positives = 254/349 (72%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
YICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEFKFPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/351 (61%), Positives = 254/351 (72%), Gaps = 40/351 (11%)
Query: 77 VTTIGGRNGQ---PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
YICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR Q
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHARIQ 351
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 429 bits (1104), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/349 (61%), Positives = 252/349 (72%), Gaps = 40/349 (11%)
Query: 77 VTTIGGRNGQPK---QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR 133
VTT+ GQ Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ K +KNR
Sbjct: 3 VTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR 62
Query: 134 ELQTMRLLDHPNV-----------------------------------HYSRASQRMPLI 158
ELQ MR LDH N+ HYSRA Q +P+I
Sbjct: 63 ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVI 122
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS 218
YVKLY YQ+ R+LAYIH G+CHRDIKPQNLL++P T +KLCDFGSAK LV+GEPN+S
Sbjct: 123 YVKLYMYQLFRSLAYIHS-FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 219 YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
ICSRYYRAPELIFGAT+YT+++D+WS GCVLAELLLGQP+FPG+SGVDQLVEIIKVLGT
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
PTRE+I+ MNPNYTEF FPQIKAHPW K+F R PPEA+ L SRLL+Y+P R T LEAC
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHAR 387
H FFDELRDPN +LPNGR P LFNF QEL ++ L + LIP HAR
Sbjct: 302 AHSFFDELRDPNVKLPNGRDTPALFNFTTQEL-SSNPPLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/350 (57%), Positives = 254/350 (72%), Gaps = 39/350 (11%)
Query: 75 IIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE 134
I V G+ G+ ++ I+Y +V+G GSFG+VFQAK +E+ E VAIKKVLQDKR+KNRE
Sbjct: 25 IKVLASDGKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE 82
Query: 135 LQTMRLLDHPNV-----------------------------------HYSRASQRMPLIY 159
LQ MR++ HPNV HY++ Q MP++
Sbjct: 83 LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL 142
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+KLY YQ+ R+LAYIH IG+CHRDIKPQNLL++P + +KL DFGSAK+L+ GEPN+S
Sbjct: 143 IKLYMYQLLRSLAYIH-SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX 201
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
ICSRYYRAPELIFGAT YTT +DIWS GCV+AEL+ GQPLFPGESG+DQLVEIIKVLGTP
Sbjct: 202 ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTP 261
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
+RE+IK MNPNY E KFPQI+ HP+ K+F R PP+A+DL+SRLL+Y+P+ R TA+EA
Sbjct: 262 SREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
HPFFDELR AR+PNGR PPLFN+ +EL +L+S+L+P+HA +
Sbjct: 322 HPFFDELRTGEARMPNGRELPPLFNWTKEEL-SVRPDLISRLVPQHAEAE 370
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 200/339 (58%), Gaps = 44/339 (12%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR---LLDHP 144
K+ + ER+ GQG+FG V K TG +VAIKKV+QD R++NRELQ M+ +L HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 145 NV------------------------------------HYSRASQRMPLIYVKLYTYQIC 168
N+ +Y R P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 169 RALAYIH-GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 227
R++ +H + VCHRDIKP N+LVN +KLCDFGSAK L EPN++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 287
PELIFG YTTAVDIWSVGC+ AE++LG+P+F G++ QL EI++VLG P+RE ++ +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHK---RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
NP++T+ K PW +F + EA DL+S LLQY P R EA HP+FD
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 345 ELRDPNARLPNGRPFP-PLFNFKPQELKGASKELLSKLI 382
EL DP +LPN + P LF F P E++ S+ +KL+
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKLV 358
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 121/247 (48%), Positives = 176/247 (71%), Gaps = 10/247 (4%)
Query: 148 YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA 207
+ R+ + +P+ + +Y YQ+ RA+ +IH +G+CHRDIKPQNLLVN + +KLCDFGSA
Sbjct: 131 FIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDNTLKLCDFGSA 189
Query: 208 KVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
K L+ EP+++ ICSR+YRAPEL+ GATEYT ++D+WS+GCV EL+LG+PLF GE+ +D
Sbjct: 190 KKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSID 249
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
QLV II+++GTPT+E++ MNP+YTE +FP +KA W KI + P A+DL+ ++L+Y
Sbjct: 250 QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309
Query: 328 PNLRCTALEACIHPFFDELRDP-------NARLPNG--RPFPPLFNFKPQELKGASKELL 378
P+LR EA HPFFD LR+ N+ P+G + P LFNF P EL +L
Sbjct: 310 PDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGNVL 369
Query: 379 SKLIPEH 385
++++P++
Sbjct: 370 NRILPKN 376
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNV 146
Y + +G GSFGIV + +E+G+ A+KKVLQD RYKNREL M++LDH N+
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 168/321 (52%), Gaps = 53/321 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH------ 143
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 144 --------------------------PNVHYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
++H ++Q + +++ + YQ RA+ +HG
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YICSRYYR 226
V HRD+KP NLL+N + +K+CDFG A+++ + + S Y+ +R+YR
Sbjct: 132 -NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIK 285
APE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 286 CM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 343 FDELRDPNARLPNGRPFPPLF 363
DPN P G P PP F
Sbjct: 309 LQTYHDPNDE-PEGEPIPPSF 328
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 169/321 (52%), Gaps = 53/321 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH------ 143
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 144 --------------------------PNVHYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
++H ++Q + +++ + YQ RA+ +HG
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-----EPN------ISYICSRYYR 226
V HRD+KP NLL+N + +K+CDFG A+++ + EP + ++ +R+YR
Sbjct: 132 -NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIK 285
APE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 286 CM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 343 FDELRDPNARLPNGRPFPPLF 363
DPN P G P PP F
Sbjct: 309 LQTYHDPNDE-PEGEPIPPSF 328
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 167/321 (52%), Gaps = 53/321 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLLDH------ 143
+ + ++G+G++G+V A TGE VAIKK+ + R L+ +++L H
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 144 --------------------------PNVHYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
++H ++Q + +++ + YQ RA+ +HG
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-----------YICSRYYR 226
V HRD+KP NLL+N + +K+CDFG A+++ + + S + +R+YR
Sbjct: 132 -NVIHRDLKPSNLLINSNC-DLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP-TREEIK 285
APE++ + +Y+ A+D+WS GC+LAEL L +P+FPG QL+ I ++GTP + +++
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLR 249
Query: 286 CM-NPNYTEF--KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
C+ +P E+ P A P K+F R+ P+ +DL+ R+L + P R TA EA HP+
Sbjct: 250 CIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 343 FDELRDPNARLPNGRPFPPLF 363
DPN P G P PP F
Sbjct: 309 LQTYHDPNDE-PEGEPIPPSF 328
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 174/340 (51%), Gaps = 52/340 (15%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y + +G+G++G+V A VAIKK+ + + Y R L+ +++L H NV
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 148 YSR-----------------------------ASQRMPLIYVKLYTYQICRALAYIHGGI 178
R SQ++ ++ + YQI R L YIH
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA- 163
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGA 234
V HRD+KP NLL+N T +K+CDFG A++ + + + +R+YRAPE++ +
Sbjct: 164 NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPN 290
YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ N
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARN 282
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Y + P W K+F K +A+DL+ R+L ++PN R T EA HP+ ++ DP
Sbjct: 283 YLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYYDPT 340
Query: 351 ARLPNGRPFPPLFNFKPQELKGASKELLSKLI-PEHARKQ 389
P F F EL KE L +LI E AR Q
Sbjct: 341 DEPVAEEP----FTFA-MELDDLPKERLKELIFQETARFQ 375
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 162/310 (52%), Gaps = 52/310 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------REL 135
G G P+ ++ +G+G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 136 QTMRLLDHPNV---------------------------HYSRASQRMPLIYVKLYTYQIC 168
++ L+HPN+ + A +PL +K Y +Q+
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYY 225
+ LA+ H V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +Y
Sbjct: 121 QGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 226 RAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 285
RAPE++ G Y+TAVDIWS+GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 286 CMN--PNYTEFKFPQIKAHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACI 339
+ P+Y FP+ W + F K +PP D L+S++L Y PN R +A A
Sbjct: 237 GVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 340 HPFFDELRDP 349
HPFF ++ P
Sbjct: 291 HPFFQDVTKP 300
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 162/310 (52%), Gaps = 52/310 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------REL 135
G G P+ ++ +G+G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 136 QTMRLLDHPNV---------------------------HYSRASQRMPLIYVKLYTYQIC 168
++ L+HPN+ + A +PL +K Y +Q+
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL 120
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYY 225
+ LA+ H V HRD+KPQNLL+N +KL DFG A+ G P +Y + + +Y
Sbjct: 121 QGLAFCHSH-RVLHRDLKPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWY 176
Query: 226 RAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIK 285
RAPE++ G Y+TAVDIWS+GC+ AE++ + LFPG+S +DQL I + LGTP
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236
Query: 286 CMN--PNYTEFKFPQIKAHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACI 339
+ P+Y FP+ W + F K +PP D L+S++L Y PN R +A A
Sbjct: 237 GVTSMPDYKP-SFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 340 HPFFDELRDP 349
HPFF ++ P
Sbjct: 291 HPFFQDVTKP 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 164 bits (414), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 159/302 (52%), Gaps = 52/302 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 133
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 134 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 247
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNG 356
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P L
Sbjct: 248 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRLE 304
Query: 357 RP 358
RP
Sbjct: 305 RP 306
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 148 NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 264 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 322 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 73 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 245
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 246 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 158/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ------------HYSRASQR---------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + ++ +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 157/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPN------- 145
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 146 -------------VHY-------SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
VH + A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 245
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 246 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 244
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 245 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 244
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 245 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 132 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 245
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 246 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP + L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 131 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 244
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 245 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 75 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 133
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 134 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 191 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 247
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 248 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 144 NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 260 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 163
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 164 NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 280 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 338 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 376
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 162 bits (409), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 148 NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 264 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 322 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 72 IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 131 KPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 244
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 245 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + L++ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 74 IHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 133 KPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 190 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 246
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 247 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 146 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 261
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 262 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 319
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 320 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 144 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 260 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 151
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 152 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 267
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 268 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 325
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 326 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 144 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 260 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 72 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 131 KPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 187
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 188 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 244
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 245 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 73 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 132 KPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 188
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 189 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 245
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 246 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 163
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 164 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 279
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 280 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 338 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 376
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 156/293 (53%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KP+NLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPENLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 141
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 142 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 257
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 258 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 316 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 354
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 148
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 149 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 264
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 265 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 323 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 149
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 150 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 265
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 266 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 323
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 324 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 140
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 141 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 256
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 257 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 314
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 315 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 148 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 264 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 322 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 154/289 (53%), Gaps = 52/289 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+KK+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDE 345
W + F K +PP D L+S++L Y PN R +A A HPFF +
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 148 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 264 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 322 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 155/293 (52%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+ K+ D + RE+ ++ L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 129
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 130 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 186
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 187 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 243
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 244 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 155/293 (52%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+G+G++G+V++A+ TGE VA+ K+ D + RE+ ++ L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ A +PL +K Y +Q+ + LA+ H V HRD+
Sbjct: 70 IHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDL 128
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVD 242
KPQNLL+N +KL DFG A+ G P +Y + + +YRAPE++ G Y+TAVD
Sbjct: 129 KPQNLLINTEG-AIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIK 300
IWS+GC+ AE++ + LFPG+S +DQL I + LGTP + P+Y FP+
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP-SFPK-- 242
Query: 301 AHPW-HKIFHKRMPPEAVD---LVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
W + F K +PP D L+S++L Y PN R +A A HPFF ++ P
Sbjct: 243 ---WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 55/343 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 146 NVLHRDLKPSNLLLNT-TSDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC---MN 288
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLK 261
Query: 289 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRD 348
P PW+++F +A+DL+ ++L ++P+ R +A HP+ + D
Sbjct: 262 ARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYD 320
Query: 349 PNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
P+ PF F+ EL KE L +LI E + P
Sbjct: 321 PSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 172/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 145
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 146 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 261
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ +
Sbjct: 262 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 320 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 358
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 172/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 141
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 142 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P +E++ C+
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLK 257
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 258 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 316 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 354
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAI+K+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 148 NVLHRDLKPSNLLLNT-TCDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM---- 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 263
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 264 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 322 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 155/307 (50%), Gaps = 45/307 (14%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNRELQTMRLLDHP---- 144
+Y++ VG G++G V A +GE VAIKK+ Q + + R + + LL H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 145 -----NVHYSRASQR--------MPLIYVKL---------------YTYQICRALAYIHG 176
+V +S R MP + L YQ+ + L YIH
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPELIFGAT 235
GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAPE+I
Sbjct: 163 A-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWM 217
Query: 236 EYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 294
Y VDIWSVGC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N +
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY 277
Query: 295 --KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNAR 352
PQ + ++F R P+A DL+ ++L+ + R TA +A HPFF+ RDP
Sbjct: 278 IQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEE 336
Query: 353 LPNGRPF 359
+PF
Sbjct: 337 TEAQQPF 343
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/308 (33%), Positives = 157/308 (50%), Gaps = 47/308 (15%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNRELQTMRLLDHP---- 144
+Y++ VG G++G V A +GE VAIKK+ Q + + R + + LL H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 145 -----NVHYSRASQR--------MPLIYVKL---------------YTYQICRALAYIHG 176
+V +S R MP + L YQ+ + L YIH
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPELIFGAT 235
GV HRD+KP NL VN ++K+ DFG A+ + ++ Y+ +R+YRAPE+I
Sbjct: 145 A-GVVHRDLKPGNLAVNEDC-ELKILDFGLAR---HADAEMTGYVVTRWYRAPEVILSWM 199
Query: 236 EYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN----PNY 291
Y VDIWSVGC++AE+L G+ LF G+ +DQL +I+KV G P E ++ +N +Y
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY 259
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
+ PQ + ++F R P+A DL+ ++L+ + R TA +A HPFF+ RDP
Sbjct: 260 IQ-SLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEE 317
Query: 352 RLPNGRPF 359
+PF
Sbjct: 318 ETEAQQPF 325
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 171/344 (49%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+CDFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 144 NVLHRDLKPSNLLLNT-TXDLKICDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCM 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLK 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 260 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 50/298 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPN- 145
Y VG+G++G+V++AK G VA+K++ D + RE+ ++ L HPN
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 146 ------VHYSRASQRMPLIY----------------------VKLYTYQICRALAYIHGG 177
+H R + L++ +K+Y YQ+ R +A+ H
Sbjct: 82 VSLIDVIHSERC---LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 234
+ HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+++ G+
Sbjct: 139 -RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYT 292
+Y+T+VDIWS+GC+ AE++ G+PLFPG + DQL +I +LGTP E + P +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
+ F + PW I E +DL+S +L + PN R +A +A HP+F +L DP
Sbjct: 255 QRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 50/298 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPN- 145
Y VG+G++G+V++AK G VA+K++ D + RE+ ++ L HPN
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 146 ------VHYSRASQRMPLIY----------------------VKLYTYQICRALAYIHGG 177
+H R + L++ +K+Y YQ+ R +A+ H
Sbjct: 82 VSLIDVIHSERC---LTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGA 234
+ HRD+KPQNLL+N +KL DFG A+ G P SY + + +YRAP+++ G+
Sbjct: 139 -RILHRDLKPQNLLINSDG-ALKLADFGLARAF--GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYT 292
+Y+T+VDIWS+GC+ AE++ G+PLFPG + DQL +I +LGTP E + P +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
+ F + PW I E +DL+S +L + PN R +A +A HP+F +L DP
Sbjct: 255 QRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL-DPQ 310
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 51/341 (14%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGA 234
V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 148 NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPN 290
YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ N
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 266
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Y P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++ DP+
Sbjct: 267 YL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 324
Query: 351 ARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
PF F+ EL KE L +LI E + P
Sbjct: 325 DEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 171/341 (50%), Gaps = 51/341 (14%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 148
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY----ICSRYYRAPELIFGA 234
V HRD+KP NLL+N T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 149 NVLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM----NPN 290
YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E++ C+ N
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARN 267
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Y P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++ DP+
Sbjct: 268 YL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPS 325
Query: 351 ARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
PF F+ EL KE L +LI E + P
Sbjct: 326 DEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 361
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 166/337 (49%), Gaps = 48/337 (14%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDHPNV----- 146
+G G++G+V A+ TG+ VAIKK V+ + + REL+ ++ H N+
Sbjct: 61 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 147 --------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGV 180
+SQ + L +V+ + YQ+ R L Y+H V
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA-QV 179
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELIFGAT 235
HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 180 IHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 238
Query: 236 EYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 294
EYT A+D+WSVGC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 239 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 298
Query: 295 --KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNAR 352
P + PW ++ +A+ L+ R+L++ P+ R +A A HPF + DP+
Sbjct: 299 IQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDE 357
Query: 353 LPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
PF F+ + + + +++++ HAR++
Sbjct: 358 PDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARRE 394
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 153/312 (49%), Gaps = 49/312 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNV--- 146
+G+G F V++A+ T + VAIKK+ R + RE++ ++ L HPN+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 147 -----HYSRASQRMPLI------------------YVKLYTYQICRALAYIHGGIGVCHR 183
H S S + ++K Y + L Y+H + HR
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHR 136
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTA 240
D+KP NLL++ +KL DFG AK G PN +Y + +R+YRAPEL+FGA Y
Sbjct: 137 DLKPNNLLLD-ENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI--KCMNPNYTEFK-FP 297
VD+W+VGC+LAELLL P PG+S +DQL I + LGTPT E+ C P+Y FK FP
Sbjct: 194 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
I P H IF + +DL+ L ++P R TA +A +F P R
Sbjct: 254 GI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPR 309
Query: 358 PFPPLFNFKPQE 369
P P+ K Q
Sbjct: 310 PNCPVETLKEQS 321
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 153/301 (50%), Gaps = 37/301 (12%)
Query: 78 TTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYK 131
+G N + Y +VG+GS+G+V + + +TG VAIKK L+ K+
Sbjct: 12 VDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIA 71
Query: 132 NRELQTMRLLDHPNV----HYSRASQRMPLIY----------------------VKLYTY 165
RE++ ++ L H N+ + +R L++ V+ Y +
Sbjct: 72 MREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF 131
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK-GEPNISYICSRY 224
QI + + H + HRDIKP+N+LV+ + VKLCDFG A+ L GE + +R+
Sbjct: 132 QIINGIGFCHSH-NIIHRDIKPENILVS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRW 189
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT--PTRE 282
YRAPEL+ G +Y AVD+W++GC++ E+ +G+PLFPG+S +DQL I+ LG P +
Sbjct: 190 YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
Query: 283 EIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
E+ NP + + P+IK + + ++ +DL + L P+ R E H F
Sbjct: 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309
Query: 343 F 343
F
Sbjct: 310 F 310
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 167/337 (49%), Gaps = 48/337 (14%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKK------VLQDKRYKNRELQTMRLLDH-------- 143
+G G++G+V A+ TG+ VAIKK V+ + + REL+ ++ H
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 144 ---PNVHYSR--------------------ASQRMPLIYVKLYTYQICRALAYIHGGIGV 180
P V Y +SQ + L +V+ + YQ+ R L Y+H V
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA-QV 180
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-----ISYICSRYYRAPELIFGAT 235
HRD+KP NLLVN + ++K+ DFG A+ L Y+ +R+YRAPEL+
Sbjct: 181 IHRDLKPSNLLVNENC-ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH 239
Query: 236 EYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF- 294
EYT A+D+WSVGC+ E+L + LFPG++ V QL I+ VLGTP+ I+ +
Sbjct: 240 EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAY 299
Query: 295 --KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNAR 352
P + PW ++ +A+ L+ R+L++ P+ R +A A HPF + DP+
Sbjct: 300 IQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDE 358
Query: 353 LPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQ 389
PF F+ + + + +++++ HAR++
Sbjct: 359 PDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARRE 395
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 151/287 (52%), Gaps = 50/287 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV----HY 148
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
+R+ L++ K + Q+ +AY H V HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLK 127
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
PQNLL+N ++K+ DFG A+ G P Y I + +YRAP+++ G+ +Y+T +DI
Sbjct: 128 PQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF-----KFPQ 298
WSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE F
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTV 240
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 241 YEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 151/287 (52%), Gaps = 50/287 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV----HY 148
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
+R+ L++ K + Q+ +AY H V HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLK 127
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
PQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+ +Y+T +DI
Sbjct: 128 PQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF-----KFPQ 298
WSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE F
Sbjct: 185 WSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTV 240
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 241 YEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 151/287 (52%), Gaps = 50/287 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV----HY 148
+G+G++G+V++A+ GET A+KK+ +K + RE+ ++ L H N+
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
+R+ L++ K + Q+ +AY H V HRD+K
Sbjct: 69 IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLK 127
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
PQNLL+N ++K+ DFG A+ G P Y + + +YRAP+++ G+ +Y+T +DI
Sbjct: 128 PQNLLIN-REGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF-----KFPQ 298
WSVGC+ AE++ G PLFPG S DQL+ I ++LGTP + PN TE F
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW----PNVTELPKYDPNFTV 240
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ PW F K + +DL+S++L+ PN R TA +A H +F E
Sbjct: 241 YEPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 162/331 (48%), Gaps = 75/331 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTM-RLLDHPN 145
Y + +G+G++GIV+++ TGE VA+KK+ D + RE+ + L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 146 V----HYSRASQRMPLIYVKLY----------------------TYQICRALAYIHGGIG 179
+ + RA + V Y YQ+ + + Y+H G G
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG-G 129
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK---------------------GEPNIS 218
+ HRD+KP N+L+N H VK+ DFG ++ V +P ++
Sbjct: 130 LLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 219 -YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
Y+ +R+YRAPE++ G+T+YT +D+WS+GC+L E+L G+P+FPG S ++QL II V+
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVID 248
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAH-------------PWHKIFHKRMPP-----EAVDL 319
P+ E+++ + + + +K W + K P EA+DL
Sbjct: 249 FPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDL 308
Query: 320 VSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
+ +LLQ++PN R +A +A HPF +PN
Sbjct: 309 LDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 170/344 (49%), Gaps = 57/344 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV--LQDKRYKNRELQTMRLL---DHPNVH 147
Y +G+G++G+V A VAIKK+ + + Y R L+ +++L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 148 YSRASQRMPLI-----------------------------YVKLYTYQICRALAYIHGGI 178
R P I ++ + YQI R L YIH
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN-------ISYICSRYYRAPELI 231
V HRD+KP NLL+N T +K+ DFG A+V +P+ Y+ +R+YRAPE++
Sbjct: 144 NVLHRDLKPSNLLLNT-TXDLKIXDFGLARV---ADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE----IKCM 287
+ YT ++DIWSVGC+LAE+L +P+FPG+ +DQL I+ +LG+P++E+ I
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLK 259
Query: 288 NPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
NY P PW+++F +A+DL+ ++L ++P+ R +A HP+ ++
Sbjct: 260 ARNYL-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 348 DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCP 391
DP+ PF F+ EL KE L +LI E + P
Sbjct: 318 DPSDEPIAEAPFK--FDM---ELDDLPKEKLKELIFEETARFQP 356
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 151/314 (48%), Gaps = 45/314 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV---- 146
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 147 ----------HYSRA----------------SQRMPLIYVKLYTYQICRALAYIHGGIGV 180
+S SQ + +V+ YQ+ R L YIH G+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA-GI 152
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++ Y
Sbjct: 153 IHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFP 297
VDIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ + P
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
+ IF + P A+DL+ R+L + R +A EA H +F + DP P
Sbjct: 270 PMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAE 327
Query: 358 PFPPLFNFKPQELK 371
P+ K + L+
Sbjct: 328 PYDESVEAKERTLE 341
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 154/287 (53%), Gaps = 41/287 (14%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYKNRELQTMRLLDHPNV----HY 148
+G+GS+G+VF+ + +TG+ VAIKK L+ K+ RE++ ++ L HPN+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
R +R+ L++ VK T+Q +A+ + H HRD+K
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVK 129
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
P+N+L+ H+ +KLCDFG A++L P+ Y + +R+YR+PEL+ G T+Y VD+
Sbjct: 130 PENILITKHS-VIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQYGPPVDV 186
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG--TPTREEIKCMNPNYTEFKFPQIKA 301
W++GCV AELL G PL+PG+S VDQL I K LG P +++ N ++ K P +
Sbjct: 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPED 246
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRD 348
++ + A+ L+ L P R T + HP+F+ +R+
Sbjct: 247 MEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 49/314 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V + +++G +A+KK ++ KR REL+ ++ + H NV
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 117
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 176
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 177 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNMTV 233
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG ++QL +I+++ GTP I M NY P
Sbjct: 234 DIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYIN-SLP 292
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA EA HP+F + DP+ P
Sbjct: 293 QMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDPDDE-PESE 350
Query: 358 PFPPLFNFKPQELK 371
P+ F + E++
Sbjct: 351 PYDQSFESRQLEIE 364
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 45/314 (14%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV---- 146
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 147 ----------HYSRA----------------SQRMPLIYVKLYTYQICRALAYIHGGIGV 180
+S Q + +V+ YQ+ R L YIH G+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-GI 152
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
HRD+KP N+ VN + ++++ DFG A+ E Y+ +R+YRAPE++ Y
Sbjct: 153 IHRDLKPSNVAVNEDS-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFP 297
VDIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ + P
Sbjct: 210 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
+ IF + P A+DL+ R+L + R +A EA H +F + DP P
Sbjct: 270 PMPQKDLSSIF-RGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAE 327
Query: 358 PFPPLFNFKPQELK 371
P+ K + L+
Sbjct: 328 PYDESVEAKERTLE 341
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 152/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ A Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 153
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 154 HRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 211 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 270 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 327
Query: 358 PFPPLF 363
P+ F
Sbjct: 328 PYDQSF 333
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 148/313 (47%), Gaps = 43/313 (13%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV---- 146
R VG G++G V A + VA+KK+ L R REL+ ++ L H NV
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 147 ----------HYSRA----------------SQRMPLIYVKLYTYQICRALAYIHGGIGV 180
+S Q + +V+ YQ+ R L YIH G+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA-GI 144
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
HRD+KP N+ VN ++++ DFG A+ E Y+ +R+YRAPE++ Y
Sbjct: 145 IHRDLKPSNVAVNEDC-ELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 300
VDIWSVGC++AELL G+ LFPG +DQL I++V+GTP+ E + ++ + +
Sbjct: 202 VDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLP 261
Query: 301 AHPWHKI--FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRP 358
P + + P A+DL+ R+L + R +A EA H +F + DP P P
Sbjct: 262 PMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 320
Query: 359 FPPLFNFKPQELK 371
+ K + L+
Sbjct: 321 YDESVEAKERTLE 333
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 152/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN + ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 150 HRDLKPSNLAVNEDS-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 207 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 265
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 266 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 323
Query: 358 PFPPLF 363
P+ F
Sbjct: 324 PYDQSF 329
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 157/301 (52%), Gaps = 43/301 (14%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
+Y+ +G+G++ V++ K T VA+K++ + RE+ ++ L H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 147 ----HYSRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGV 180
+ + L++ VKL+ +Q+ R LAY H V
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ-KV 121
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEY 237
HRD+KPQNLL+N ++KL DFG A+ K P +Y + + +YR P+++ G+T+Y
Sbjct: 122 LHRDLKPQNLLINERG-ELKLADFGLARA--KSIPTKTYDNEVVTLWYRPPDILLGSTDY 178
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM--NPNYTEFK 295
+T +D+W VGC+ E+ G+PLFPG + +QL I ++LGTPT E + N + +
Sbjct: 179 STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYN 238
Query: 296 FPQIKAHPWHKIFHK-RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLP 354
+P+ +A + H R+ + DL+++LLQ+ R +A +A HPFF L + +LP
Sbjct: 239 YPKYRAEAL--LSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLP 296
Query: 355 N 355
+
Sbjct: 297 D 297
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
PF F
Sbjct: 322 PFDQSF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 153
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 154 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 211 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 270 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 327
Query: 358 PFPPLF 363
P+ F
Sbjct: 328 PYDQSF 333
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 166
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 167 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 223
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 224 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 282
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 283 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 340
Query: 358 PFPPLF 363
P+ F
Sbjct: 341 PYDQSF 346
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 157
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 158 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 214
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 215 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 273
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 274 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 331
Query: 358 PFPPLF 363
P+ F
Sbjct: 332 PYDQSF 337
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDX-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 167
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 168 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 224
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 225 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 283
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 284 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 341
Query: 358 PFPPLF 363
P+ F
Sbjct: 342 PYDQSF 347
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 158
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 159 HRDLKPSNLAVNEDX-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 215
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 216 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 274
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 275 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 332
Query: 358 PFPPLF 363
P+ F
Sbjct: 333 PYDQSF 338
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 152
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 153 HRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 268
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 269 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 326
Query: 358 PFPPLF 363
P+ F
Sbjct: 327 PYDQSF 332
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 144 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 259
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 260 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 317
Query: 358 PFPPLF 363
P+ F
Sbjct: 318 PYDQSF 323
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 154
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 155 HRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 270
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 271 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 328
Query: 358 PFPPLF 363
P+ F
Sbjct: 329 PYDQSF 334
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 151/302 (50%), Gaps = 49/302 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRA-------SQRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A SQ++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN + ++K+ DFG + + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDS-ELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PF 359
P+
Sbjct: 322 PY 323
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 153
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 154 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 211 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 270 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 327
Query: 358 PFPPLF 363
P+ F
Sbjct: 328 PYDQSF 333
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 159
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 160 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 217 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 275
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 276 QMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 333
Query: 358 PFPPLF 363
P+ F
Sbjct: 334 PYDQSF 339
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 159
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 160 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 217 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 275
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 276 QMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 333
Query: 358 PFPPLF 363
P+ F
Sbjct: 334 PYDQSF 339
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 159
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 160 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 216
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 217 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 275
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 276 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 333
Query: 358 PFPPLF 363
P+ F
Sbjct: 334 PYDQSF 339
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 153
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 154 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 210
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 211 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 269
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 270 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 327
Query: 358 PFPPLF 363
P+ F
Sbjct: 328 PYDQSF 333
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
+G G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 152
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 153 HRDLKPSNLAVN-EDXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 268
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 269 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 326
Query: 358 PFPPLF 363
P+ F
Sbjct: 327 PYDQSF 332
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 158
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 159 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 215
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 216 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 274
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 275 QMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 332
Query: 358 PFPPLF 363
P+ F
Sbjct: 333 PYDQSF 338
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 154
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 155 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 270
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 271 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 328
Query: 358 PFPPLF 363
P+ F
Sbjct: 329 PYDQSF 334
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 167
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 168 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 224
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 225 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 283
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 284 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 341
Query: 358 PFPPLF 363
P+ F
Sbjct: 342 PYDQSF 347
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 150 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 207 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 265
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 266 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 323
Query: 358 PFPPLF 363
P+ F
Sbjct: 324 PYDQSF 329
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 170
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 171 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 227
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 228 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 286
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 287 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 344
Query: 358 PFPPLF 363
P+ F
Sbjct: 345 PYDQSF 350
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 150 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 207 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 265
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 266 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 323
Query: 358 PFPPLF 363
P+ F
Sbjct: 324 PYDQSF 329
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 152
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 153 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 268
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 269 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 326
Query: 358 PFPPLF 363
P+ F
Sbjct: 327 PYDQSF 332
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 147 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 203
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 204 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 262
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 263 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 320
Query: 358 PFPPLF 363
P+ F
Sbjct: 321 PYDQSF 326
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 150/302 (49%), Gaps = 49/302 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 154
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 155 HRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 270
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 271 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 328
Query: 358 PF 359
P+
Sbjct: 329 PY 330
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 152
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 153 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 209
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 210 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 268
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 269 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 326
Query: 358 PFPPLF 363
P+ F
Sbjct: 327 PYDQSF 332
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 170
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 171 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTV 227
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 228 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 286
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 287 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 344
Query: 358 PFPPLF 363
P+ F
Sbjct: 345 PYDQSF 350
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 166
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 167 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 223
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 224 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 282
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 283 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 340
Query: 358 PFPPLF 363
P+ F
Sbjct: 341 PYDQSF 346
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 150/302 (49%), Gaps = 49/302 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 154
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 155 HRDLKPSNLAVNEDC-ELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTV 211
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 212 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 270
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 271 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 328
Query: 358 PF 359
P+
Sbjct: 329 PY 330
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 150 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 206
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 207 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 265
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 266 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 323
Query: 358 PFPPLF 363
P+ F
Sbjct: 324 PYDQSF 329
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 145
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 146 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 202
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 203 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 261
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 262 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 319
Query: 358 PFPPLF 363
P+ F
Sbjct: 320 PYDQSF 325
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 144
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 145 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 201
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 202 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 260
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 261 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 318
Query: 358 PFPPLF 363
P+ F
Sbjct: 319 PYDQSF 324
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 144
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 145 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 201
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 202 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 260
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 261 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 318
Query: 358 PFPPLF 363
P+ F
Sbjct: 319 PYDQSF 324
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 144 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 259
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 260 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 317
Query: 358 PFPPLF 363
P+ F
Sbjct: 318 PYDQSF 323
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 147/293 (50%), Gaps = 48/293 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 147/293 (50%), Gaps = 48/293 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 264 QMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 144 bits (363), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 147/293 (50%), Gaps = 48/293 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 315
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + ++ +R+YRAPE++ Y V
Sbjct: 144 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTV 200
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 259
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 260 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 317
Query: 358 PFPPLF 363
P+ F
Sbjct: 318 PYDQSF 323
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 147 --HYSRASQRMPLIY-----------------------VKLYTYQICRALAYIHGGIGVC 181
+R+ + +Y V+ YQI R L YIH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA-DII 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 144 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 259
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 260 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 317
Query: 358 PFPPLF 363
P+ F
Sbjct: 318 PYDQSF 323
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ D+G A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 151/316 (47%), Gaps = 55/316 (17%)
Query: 82 GRNGQPKQTISYMAERV---------VGQGSFGIVFQAKCLETGETVAIKKV---LQDKR 129
R+G +Q ++ A V VG G++G V A TG VAIKK+ Q +
Sbjct: 7 ARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL 66
Query: 130 YKNRELQTMRLLDH---PNV--------------HYSRASQRMPLI-------------- 158
+ R + +RLL H NV ++ MP +
Sbjct: 67 FAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG 126
Query: 159 --YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPN 216
++ YQ+ + L YIH G+ HRD+KP NL VN ++K+ DFG A+
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDC-ELKILDFGLARQ--ADSEM 182
Query: 217 ISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVL 276
+ +R+YRAPE+I YT VDIWSVGC++AE++ G+ LF G +DQL EI+KV
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 242
Query: 277 GTPTREEIKCMNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC 332
GTP E ++ + NY + P+++ + I P AV+L+ ++L R
Sbjct: 243 GTPPAEFVQRLQSDEAKNYMK-GLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRV 300
Query: 333 TALEACIHPFFDELRD 348
TA EA HP+F+ L D
Sbjct: 301 TAGEALAHPYFESLHD 316
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DF A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 167
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++ Y V
Sbjct: 168 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTV 224
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 225 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLA 283
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 284 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 341
Query: 358 PFPPLF 363
P+ F
Sbjct: 342 PYDQSF 347
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ FG A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 149/293 (50%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV----HY 148
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
+ +++ L++ VK + +Q+ + L + H V HRD+K
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLK 128
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
PQNLL+N ++KL +FG A+ G P Y + + +YR P+++FGA Y+T++D+
Sbjct: 129 PQNLLIN-RNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 244 WSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
WS GC+ AEL G+PLFPG DQL I ++LGTPT E+ M K P K +
Sbjct: 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPY 239
Query: 303 PWHKIFHK------RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
P + ++ DL+ LL+ +P R +A EA HP+F + P
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ DFG A+ + + +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 148/293 (50%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV----HY 148
+G+G++G VF+AK ET E VA+K+V D + RE+ ++ L H N+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 149 SRASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHRDIK 186
+ +++ L++ VK + +Q+ + L + H V HRD+K
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLK 128
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTAVDI 243
PQNLL+N ++KL DFG A+ G P Y + + +YR P+++FGA Y+T++D+
Sbjct: 129 PQNLLIN-RNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 244 WSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
WS GC+ AEL +PLFPG DQL I ++LGTPT E+ M K P K +
Sbjct: 186 WSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPY 239
Query: 303 PWHKIFHK------RMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
P + ++ DL+ LL+ +P R +A EA HP+F + P
Sbjct: 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 150/306 (49%), Gaps = 49/306 (16%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKK-------VLQDKRYKNRELQTMRLLDHPNV----- 146
VG G++G V A +TG VA+KK ++ KR REL+ ++ + H NV
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 147 ------------------HYSRAS-------QRMPLIYVKLYTYQICRALAYIHGGIGVC 181
H A Q++ +V+ YQI R L YIH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA-DII 147
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
HRD+KP NL VN ++K+ D G A+ + Y+ +R+YRAPE++ Y V
Sbjct: 148 HRDLKPSNLAVNEDC-ELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTV 204
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFP 297
DIWSVGC++AELL G+ LFPG +DQL I++++GTP E +K ++ NY +
Sbjct: 205 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLT 263
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGR 357
Q+ + +F P AVDL+ ++L + R TA +A H +F + DP+ P
Sbjct: 264 QMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDE-PVAD 321
Query: 358 PFPPLF 363
P+ F
Sbjct: 322 PYDQSF 327
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 149/293 (50%), Gaps = 52/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV----HYS 149
+G G++ V++ TG VA+K+V D RE+ M+ L H N+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 150 RASQRMPLIY---------------------------VKLYTYQICRALAYIHGGIGVCH 182
++ L++ VK + +Q+ + LA+ H + H
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILH 131
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAPELIFGATEYTTAV 241
RD+KPQNLL+N Q+KL DFG A+ + S + + +YRAP+++ G+ Y+T++
Sbjct: 132 RDLKPQNLLINKRG-QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF-KF-PQI 299
DIWS GC+LAE++ G+PLFPG + +QL I ++GTP + + P+ T+ K+ P I
Sbjct: 191 DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPN----ESLWPSVTKLPKYNPNI 246
Query: 300 KAHPWHKIF-----HKRMPPEA--VDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ P + H + P + +D + LLQ +P++R +A +A HP+F E
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 64/306 (20%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNV-- 146
YM + +G G G+VF A + + VAIKK++ Q ++ RE++ +R LDH N+
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 147 ----------------------------------HYSRASQRMPLI--YVKLYTYQICRA 170
+ ++ PL+ + +L+ YQ+ R
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRG 132
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-------ICSR 223
L YIH V HRD+KP NL +N +K+ DFG A+++ +P+ S+ + ++
Sbjct: 133 LKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIM---DPHYSHKGHLSEGLVTK 188
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQL---VEIIKVLGTPT 280
+YR+P L+ YT A+D+W+ GC+ AE+L G+ LF G ++Q+ +E I V+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 281 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPP---EAVDLVSRLLQYSPNLRCTALEA 337
R+E+ + P Y + HK + +P EAVD + ++L +SP R TA EA
Sbjct: 249 RQELLSVIPVYIRNDMTEP-----HKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 338 CIHPFF 343
HP+
Sbjct: 304 LSHPYM 309
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 54/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV------------LQDKRYKNRELQTMRL 140
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 141 LDH---PN--------VHYSR-ASQRMPLI----------------------YVKLYTYQ 166
L+H PN VH+ A ++ L+ +++ + Y
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 226
I L +H GV HRD+ P N+L+ + + +CDF A+ Y+ R+YR
Sbjct: 143 ILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
APEL+ +T VD+WS GCV+AE+ + LF G + +QL +I++V+GTP E++
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 287 MNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ +Y + A W + P A+DL++++L+++P R + +A HP+
Sbjct: 261 FSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 343 FDELRDP 349
F+ L DP
Sbjct: 320 FESLFDP 326
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 54/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV------------LQDKRYKNRELQTMRL 140
Y +R + GS+G V A G VAIK+V L D R L+ +RL
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 141 LDH---PN--------VHYSR-ASQRMPLI----------------------YVKLYTYQ 166
L+H PN VH+ A ++ L+ +++ + Y
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH 142
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 226
I L +H GV HRD+ P N+L+ + + +CDF A+ Y+ R+YR
Sbjct: 143 ILLGLHVLHEA-GVVHRDLHPGNILL-ADNNDITICDFNLAREDTADANKTHYVTHRWYR 200
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
APEL+ +T VD+WS GCV+AE+ + LF G + +QL +I++V+GTP E++
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVM 260
Query: 287 MNP----NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ +Y + A W + P A+DL++++L+++P R + +A HP+
Sbjct: 261 FSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319
Query: 343 FDELRDP 349
F+ L DP
Sbjct: 320 FESLFDP 326
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 148 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 206
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 267 ------DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 320
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 321 RYDHQERLTALEAMTHPYFQQVR 343
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 39/289 (13%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-NRELQTMR----------- 139
Y R +G+G + VF+A + E V +K + K+ K RE++ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 140 --------------LLDH-PNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+ +H N + + Q + ++ Y Y+I +AL Y H +G+ HRD
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRD 156
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIW 244
+KP N++++ +++L D+G A+ G+ + SRY++ PEL+ Y ++D+W
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMW 216
Query: 245 SVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQ 298
S+GC+LA ++ +P F G DQLV I KVLGT + ++P + + +
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGR 275
Query: 299 IKAHPWHKIFHKR----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
W + H + PEA+D + +LL+Y R TA EA HP+F
Sbjct: 276 HSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 128 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 247 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 301 RYDHQERLTALEAMTHPYFQQVR 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 ------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 128 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 186
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 247 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 300
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 301 RYDHQERLTALEAMTHPYFQQVR 323
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 129 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 187
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 248 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 301
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 302 RYDHQERLTALEAMTHPYFQQVR 324
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 114/203 (56%), Gaps = 22/203 (10%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+G A+ G+
Sbjct: 127 IRYYIYELLKALDYCHSQ-GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR 185
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGT 278
+ SRY++ PEL+ +Y ++D+WS+GC+ A ++ +P F G DQLV+I KVLGT
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245
Query: 279 PTREEIKCMNPNYTEFKF---PQIKA-------HPWHKIFHKR----MPPEAVDLVSRLL 324
+N +++ PQ++A PW K + + PEA+D + +LL
Sbjct: 246 DG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLL 299
Query: 325 QYSPNLRCTALEACIHPFFDELR 347
+Y R TALEA HP+F ++R
Sbjct: 300 RYDHQERLTALEAMTHPYFQQVR 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N+L++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVLIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLRQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 117 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 175
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 176 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 236 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 294
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 295 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 123 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 181
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 182 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 241
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 242 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 300
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 301 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 339
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 12/219 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARL 353
EA+D + +LL+Y R TA EA HP+F + AR+
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVKDQARM 334
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 47/290 (16%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNV-- 146
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 147 -----HYSRASQ--RMPLIY-----------------------VKLYTYQICRALAYIHG 176
SR + ++ L++ +K +Q+ R L ++H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 236
V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++ ++
Sbjct: 139 H-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS- 195
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
Y T VD+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ + F
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPRQAF 254
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
A P K F + DL+ + L ++P R +A A HP+F +L
Sbjct: 255 HSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 143/290 (49%), Gaps = 47/290 (16%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNV-- 146
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 147 -----HYSRASQ--RMPLIY-----------------------VKLYTYQICRALAYIHG 176
SR + ++ L++ +K +Q+ R L ++H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 236
V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++ ++
Sbjct: 139 H-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS- 195
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
Y T VD+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ + F
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPRQAF 254
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
A P K F + DL+ + L ++P R +A A HP+F +L
Sbjct: 255 HSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
EA+D + +LL+Y R TA EA HP+F
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
EA+D + +LL+Y R TA EA HP+F
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 116 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 174
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 175 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 234
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 235 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 293
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
EA+D + +LL+Y R TA EA HP+F
Sbjct: 294 EALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 117 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 175
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 176 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 235
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 236 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 294
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
EA+D + +LL+Y R TA EA HP+F
Sbjct: 295 EALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 18/212 (8%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+
Sbjct: 119 NTDFKQLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVMIDHQQKKLRLIDW 177
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ + + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G+
Sbjct: 178 GLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQ 237
Query: 264 SGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAHPWHKIFHKR---- 311
DQLV I KVLGT EE+ ++P++ + Q W H
Sbjct: 238 DNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHL 293
Query: 312 MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ PEA+DL+ +LL+Y R TA EA HP+F
Sbjct: 294 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 111/209 (53%), Gaps = 12/209 (5%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y+I +AL Y H +G+ HRD+KP N++++ +++L D+
Sbjct: 118 NTDFKQLYQTLTDYDIRFYMYEILKALDYCHS-MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ G+ + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G
Sbjct: 177 GLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
Query: 264 SGVDQLVEIIKVLGTPTREEIKC-----MNPNYTEFKFPQIKAHPWHKIFHKR----MPP 314
DQLV I KVLGT + ++P + + + W + H + P
Sbjct: 237 DNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDI-LGRHSRKRWERFVHSENQHLVSP 295
Query: 315 EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
EA+D + +LL+Y R TA EA HP+F
Sbjct: 296 EALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 18/212 (8%)
Query: 145 NVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDF 204
N + + Q + ++ Y Y++ +AL Y H G+ HRD+KP N++++ +++L D+
Sbjct: 124 NTDFKQLYQILTDFDIRFYMYELLKALDYCHSK-GIMHRDVKPHNVMIDHQQKKLRLIDW 182
Query: 205 GSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGE 263
G A+ + + SRY++ PEL+ Y ++D+WS+GC+LA ++ +P F G+
Sbjct: 183 GLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQ 242
Query: 264 SGVDQLVEIIKVLGTPTREEIKC--------MNPNYTEFKFPQIKAHPWHKIFHKR---- 311
DQLV I KVLGT EE+ ++P++ + Q W H
Sbjct: 243 DNYDQLVRIAKVLGT---EELYGYLKKYHIDLDPHFNDI-LGQHSRKRWENFIHSENRHL 298
Query: 312 MPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ PEA+DL+ +LL+Y R TA EA HP+F
Sbjct: 299 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 44/285 (15%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSRA- 151
+G+G++G V++A T ETVAIK++ + + RE+ ++ L H N+ ++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 152 ---SQRMPLIY---------------------VKLYTYQICRALAYIHGGIGVCHRDIKP 187
+ R+ LI+ +K + YQ+ + + H HRD+KP
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKP 160
Query: 188 QNLLVN----PHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTA 240
QNLL++ T +K+ DFG A+ G P + I + +YR PE++ G+ Y+T+
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTS 218
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQ 298
VDIWS+ C+ AE+L+ PLFPG+S +DQL +I +VLG P + P++ + FP+
Sbjct: 219 VDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQ-SFPK 277
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ ++ + E +DL++ +L+ P R +A A HP+F
Sbjct: 278 FRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 47/287 (16%)
Query: 99 VGQGSFGIVFQAKCLETG-ETVAIKKVLQDKRYKNRELQTMR---------LLDHPNV-- 146
+G+G++G VF+A+ L+ G VA+K+V + L T+R +HPNV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 147 -----HYSRASQ--RMPLIY-----------------------VKLYTYQICRALAYIHG 176
SR + ++ L++ +K +Q+ R L ++H
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE 236
V HRD+KPQN+LV + Q+KL DFG A++ S + + +YRAPE++ ++
Sbjct: 139 H-RVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS- 195
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
Y T VD+WSVGC+ AE+ +PLF G S VDQL +I+ V+G P E+ + F
Sbjct: 196 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPRQAF 254
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
A P K F + DL+ + L ++P R +A A HP+F
Sbjct: 255 HSKSAQPIEK-FVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 145/307 (47%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV------ 146
+G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 147 --------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGGIGVCHR 183
+ M L+ L YQ+ + ++H G+ HR
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA-GIIHR 150
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y VDI
Sbjct: 151 DLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEFKFPQIK 300
WSVG ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E + P+
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYA 267
Query: 301 AHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
+ + K+F +K +A DL+S++L + R + EA HP+ + DP
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
Query: 350 N 350
+
Sbjct: 328 S 328
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKLYT---------------YQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 345 ELRDP 349
DP
Sbjct: 323 VWYDP 327
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 142/301 (47%), Gaps = 53/301 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV------ 146
+G G+ GIV A VAIKK+ Q++ + R EL M++++H N+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 147 --------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGGIGVCHR 183
+ M L+ L YQ+ + ++H G+ HR
Sbjct: 92 FTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSA-GIIHR 150
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y VDI
Sbjct: 151 DLKPSNIVVKSDA-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEFKFPQIK 300
WSVG ++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E + P+
Sbjct: 209 WSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVENR-PKYA 267
Query: 301 AHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
+ + K+F +K +A DL+S++L + R + EA HP+ + DP
Sbjct: 268 GYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 327
Query: 350 N 350
+
Sbjct: 328 S 328
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP+ E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKLYT---------------YQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 345 ELRDP 349
DP
Sbjct: 323 VWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 147 --------------HYSRASQRMPLIYVKLYT---------------YQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSA 138
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 139 -GIIHRDLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 345 ELRDP 349
DP
Sbjct: 316 VWYDP 320
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 152/337 (45%), Gaps = 64/337 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 85
Query: 147 ----------------------------------HYSRASQRMPLIYVKLYTYQICRALA 172
H +RM + YQ+ +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL-----LYQMLCGIK 140
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 232
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 141 HLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL 198
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP--- 289
G Y VDIWSVGC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 199 GMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 257
Query: 290 NYTEF--KFPQIK--------AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
NY E K+P IK P K +A DL+S++L P+ R + EA
Sbjct: 258 NYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALR 317
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKE 376
HP+ DP P P +++ + +E + A +E
Sbjct: 318 HPYITVWYDPAEA---EAPPPQIYDAQLEEREHAIEE 351
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 147
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ + ++ +RYYRAPE+I G Y
Sbjct: 148 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMG-Y 204
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 264
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 265 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 323
Query: 344 DELRDPN 350
+ DP+
Sbjct: 324 NVWYDPS 330
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV------ 146
+G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 147 --------HYSRASQRMPLIYVKLYT---------------YQICRALAYIHGGIGVCHR 183
+ M L+ L YQ+ + ++H G+ HR
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSA-GIIHR 150
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y VDI
Sbjct: 151 DLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE------- 293
WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 268
Query: 294 FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
FP++ P +K +A DL+S++L P R + +A HP+ + DP
Sbjct: 269 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 327
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 147 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 263
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 264 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 322
Query: 344 DELRDPN 350
+ DP+
Sbjct: 323 NVWYDPS 329
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 183
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 184 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 345 ELRDP 349
DP
Sbjct: 361 VWYDP 365
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 159/402 (39%), Gaps = 121/402 (30%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ------DKRYKNRELQTMRLLDHPNV 146
Y ++G GS+G V +A VAIKK+L+ D + RE+ + L+H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 147 ------------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHG 176
R + +++K Y + + Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS 174
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS------------------ 218
G+ HRD+KP N LVN VK+CDFG A+ + E S
Sbjct: 175 A-GILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 219 ----------YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLL-----------GQ 257
++ +R+YRAPELI YT A+D+WS+GC+ AELL
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG 292
Query: 258 PLFPGES--------------------GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
PLFPG S DQL I +LGTP+ E+I+ +
Sbjct: 293 PLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKE------- 345
Query: 298 QIKAHPWHKIFHKR-----------MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
A + +IF KR +A+ L+ R+L ++PN R T E HPFF E+
Sbjct: 346 --DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403
Query: 347 R----DPNARLPNGRPFPPLFNFKPQELKGASKELLSKLIPE 384
R + NA PF N +L+ A + + + PE
Sbjct: 404 RIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 147 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 345 ELRDP 349
DP
Sbjct: 324 VWYDP 328
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 183
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 184 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 240
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 300
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 301 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
Query: 345 ELRDP 349
DP
Sbjct: 361 VWYDP 365
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 345 ELRDP 349
DP
Sbjct: 323 VWYDP 327
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 262
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 263 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
Query: 345 ELRDP 349
DP
Sbjct: 323 VWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 147 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 203
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 263
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 264 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
Query: 345 ELRDP 349
DP
Sbjct: 324 VWYDP 328
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 144
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 145 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 201
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 261
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 262 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
Query: 345 ELRDP 349
DP
Sbjct: 322 VWYDP 326
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 140 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 345 ELRDP 349
DP
Sbjct: 317 VWYDP 321
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 140 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 256
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 257 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
Query: 345 ELRDP 349
DP
Sbjct: 317 VWYDP 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 138
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 139 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 195
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE- 293
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVEN 255
Query: 294 ------FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 256 RPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
Query: 345 ELRDP 349
DP
Sbjct: 316 VWYDP 320
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 153/338 (45%), Gaps = 66/338 (19%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A G VA+KK+ Q++ + R EL ++ ++H N+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI 83
Query: 147 ----------------------------------HYSRASQRMPLIYVKLYTYQICRALA 172
H +RM + YQ+ +
Sbjct: 84 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYL-----LYQMLCGIK 138
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 232
++H G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I
Sbjct: 139 HLHSA-GIIHRDLKPSNIVVKSDC-TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL 196
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP--- 289
G Y VDIWSVGC++ EL+ G +F G +DQ ++I+ LGTP+ E + + P
Sbjct: 197 GMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVR 255
Query: 290 NYTEFKFPQIKAHPWHKIFHKRMPP-----------EAVDLVSRLLQYSPNLRCTALEAC 338
NY E + P + ++F + P +A DL+S++L P+ R + EA
Sbjct: 256 NYVENR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEAL 314
Query: 339 IHPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASKE 376
HP+ DP P P +++ + +E + A +E
Sbjct: 315 RHPYITVWYDPAEA---EAPPPQIYDAQLEEREHAIEE 349
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 51/294 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV------ 146
+G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 147 --------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGGIGVCHR 183
+ M L+ L YQ+ + ++H G+ HR
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA-GIIHR 150
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y VDI
Sbjct: 151 DLKPSNIVVKSDX-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDI 208
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTE------- 293
WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P NY E
Sbjct: 209 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 268
Query: 294 FKFPQI---KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
FP++ P +K +A DL+S++L P R + +A HP+ +
Sbjct: 269 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 150
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 151 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 207
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VD+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 267
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 268 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 326
Query: 344 DELRDPN 350
+ DP+
Sbjct: 327 NVWYDPS 333
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 139
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G Y
Sbjct: 140 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-Y 196
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VD+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 256
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 257 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315
Query: 344 DELRDPN 350
+ DP+
Sbjct: 316 NVWYDPS 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ G LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIFHKRMPP-----------EAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F + P +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 156/349 (44%), Gaps = 99/349 (28%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNRELQTMRLLDHPNVHY 148
+Y+ + ++G+GS+G V+ A T + VAIKKV +D R L+ + +L+ Y
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 149 S-----------------------------RASQRMPLI----YVKLYTYQICRALAYIH 175
+ + P+ ++K Y + +IH
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNI----------------- 217
G+ HRD+KP N L+N VK+CDFG A+ + + + NI
Sbjct: 147 ES-GIIHRDLKPANCLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNL 204
Query: 218 -----SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQ----------PLFP 261
S++ +R+YRAPELI YT ++DIWS GC+ AELL + Q PLFP
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 262 G-----------------ESGVDQLVEIIKVLGTPTREEIKCMN-PNYTEFKFPQIKAHP 303
G +S DQL I ++GTPT +++K +N P ++ IK P
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY----IKLFP 320
Query: 304 WHKIFHKR-----MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELR 347
K + + + + ++L+ +L+++PN R T +A HP+ ++R
Sbjct: 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 142/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VDIWSVGC++ E++ + LFPG +DQ ++I+ LGTP +K + P NY E
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 53/307 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNR---ELQTMRLLDHPNV 146
Y + +G G+ GIV A VAIKK+ Q++ + R EL M+ ++H N+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 147 --------------HYSRASQRMPLIYVKL---------------YTYQICRALAYIHGG 177
+ M L+ L YQ+ + ++H
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 145
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE+I G Y
Sbjct: 146 -GIIHRDLKPSNIVVKSDC-TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMG-Y 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP---NYTEF 294
VD+WSVGC++ E++ + LFPG +DQ ++I+ LGTP E +K + P Y E
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVEN 262
Query: 295 KFPQIKAHPWHKIF-----------HKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ P+ + + K+F +K +A DL+S++L + R + EA HP+
Sbjct: 263 R-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321
Query: 344 DELRDPN 350
+ DP+
Sbjct: 322 NVWYDPS 328
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 148/329 (44%), Gaps = 79/329 (24%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 144
P ++Y E +V+G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 145 N----------VHY--------------------------SRASQRMPLIYVKLYTYQIC 168
+H Q L V+ + + I
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSRYYRA 227
+ L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR+YRA
Sbjct: 211 QCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRA 267
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 287
PE+I GA Y +D+WS+GC+LAELL G PL PGE DQL +I++LG P++ K +
Sbjct: 268 PEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ---KLL 323
Query: 288 NPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA------------- 316
+ + F K +P + + R PPE+
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 317 --VDLVSRLLQYSPNLRCTALEACIHPFF 343
+D + + L++ P +R T +A HP+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 148/329 (44%), Gaps = 79/329 (24%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 144
P ++Y E +V+G+GSFG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 145 N----------VHY--------------------------SRASQRMPLIYVKLYTYQIC 168
+H Q L V+ + + I
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSRYYRA 227
+ L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR+YRA
Sbjct: 211 QCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSRFYRA 267
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 287
PE+I GA Y +D+WS+GC+LAELL G PL PGE DQL +I++LG P++ K +
Sbjct: 268 PEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ---KLL 323
Query: 288 NPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA------------- 316
+ + F K +P + + R PPE+
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 317 --VDLVSRLLQYSPNLRCTALEACIHPFF 343
+D + + L++ P +R T +A HP+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 146/354 (41%), Gaps = 100/354 (28%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV---LQDKRYKNRELQTMRLLDHPNVHY 148
+Y + ++G+GS+G V+ A + VAIKKV +D R L+ + +L+ Y
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 149 S-----------------------------RASQRMPLI----YVKLYTYQICRALAYIH 175
+ + P+ +VK Y + +IH
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI------------------ 217
G+ HRD+KP N L+N VK+CDFG A+ + + +I
Sbjct: 149 ES-GIIHRDLKPANCLLNQDC-SVKICDFGLART-INSDKDIHIVNDLEEKEENEEPGPH 205
Query: 218 ---------SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ----------- 257
S++ +R+YRAPELI YT ++DIWS GC+ AELL
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRF 265
Query: 258 PLFPG-----------------ESGVDQLVEIIKVLGTPTREEIKCMNPN----YTEFKF 296
PLFPG +S DQL I V+GTP E++KC+ Y + F
Sbjct: 266 PLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKL-F 324
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPN 350
P K + + E +DL+ +L+++ R T +A HP+ ++R N
Sbjct: 325 PTRDGIDLSKKY-SSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 119/235 (50%), Gaps = 42/235 (17%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 143 HPN----------VHYSRA---SQRMPLIYVKL-----------------------YTYQ 166
N VH R + L++ L + Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 167 ICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR+
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRF 223
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
YR+PE++ G Y A+D+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 224 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 145/341 (42%), Gaps = 81/341 (23%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 143 HPNVHYSRAS------------------------------------QRMPLIYVKLYTYQ 166
N H + + + L + + Q
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 167 ICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR+
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRF 204
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
YR+PE++ G Y A+D+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG P I
Sbjct: 205 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP-AHI 262
Query: 285 KCMNPNYTEFKFPQIKAHPWH----------------KIFHKRMPPEA------------ 316
P +F F ++ W+ + H + E
Sbjct: 263 LDQAPKARKF-FEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 321
Query: 317 ---------VDLVSRLLQYSPNLRCTALEACIHPFFDELRD 348
DL+ R+L Y P R A H FF + D
Sbjct: 322 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 362
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 119/235 (50%), Gaps = 42/235 (17%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 142
+NG+ K Y + ++G+GSFG V +A E VAIK + K + N+ +RLL+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 143 HPN----------VHYSRA---SQRMPLIYVKL-----------------------YTYQ 166
N VH R + L++ L + Q
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 167 ICRALAYIHG-GIGVCHRDIKPQN-LLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
+C AL ++ + + H D+KP+N LL NP +K+ DFGS+ L G+ I SR+
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIYQXIQSRF 223
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
YR+PE++ G Y A+D+WS+GC+L E+ G+PLF G + VDQ+ +I++VLG P
Sbjct: 224 YRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 54/290 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 V-------HYSRASQRMPLIYV------KLYTY-------------------QICRALAY 173
V SR + + + V L TY Q R L +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 174 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 233
+H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++
Sbjct: 128 LHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
+T Y T VD+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 186 ST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPR 243
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
FP P + M L+ +L ++P+ R +A A H +
Sbjct: 244 GAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 50/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNV------ 146
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 147 ------HYSRASQRMPLIY---------------VKLYTYQICRALAYIHGGI------G 179
Y+R + L++ VK +I R + + G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPELIFGA 234
+ HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+Y +D+W GC++AE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 295 KFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ ++ K+ + P A+DL+ +LL P R + +A H FF
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 50/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVH----- 147
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 148 -------YSRASQRMPLIY---------------VKLYTYQICRALAYIHGGI------G 179
Y+R + L++ VK +I R + + G+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPELIFGA 234
+ HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+Y +D+W GC++AE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 295 KFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ ++ K+ + P A+DL+ +LL P R + +A H FF
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 54/290 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 V-------HYSRASQRMPLIYV------KLYTY-------------------QICRALAY 173
V SR + + + V L TY Q R L +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 174 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 233
+H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++
Sbjct: 128 LHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
+T Y T VD+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 186 ST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPR 243
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
FP P + M L+ +L ++P+ R +A A H +
Sbjct: 244 GAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 50/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVH----- 147
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 148 -------YSRASQRMPLIY---------------VKLYTYQICRALAYIHGGI------G 179
Y+R + L++ VK +I R + + G+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPELIFGA 234
+ HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL+ G
Sbjct: 146 ILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 204
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+Y +D+W GC++AE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 205 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 263
Query: 295 KFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ ++ K+ + P A+DL+ +LL P R + +A H FF
Sbjct: 264 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 50/293 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVH----- 147
+GQG+FG VF+A+ +TG+ VA+KKVL + + RE++ ++LL H NV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 148 -------YSRASQRMPLIY---------------VKLYTYQICRALAYIHGGI------G 179
Y+R + L++ VK +I R + + G+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 144
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV---KGEPN--ISYICSRYYRAPELIFGA 234
+ HRD+K N+L+ +KL DFG A+ +PN + + + +YR PEL+ G
Sbjct: 145 ILHRDMKAANVLIT-RDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGE 203
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+Y +D+W GC++AE+ P+ G + QL I ++ G+ T E ++ NY +
Sbjct: 204 RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-NYELY 262
Query: 295 KFPQIKAHPWHKIFHKRMP----PEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ ++ K+ + P A+DL+ +LL P R + +A H FF
Sbjct: 263 EKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 54/290 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----------RELQTMRLLD---HPN 145
+G G++G V++A+ +G VA+K V R N RE+ +R L+ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 146 V-------HYSRASQRMPLIYV------KLYTY-------------------QICRALAY 173
V SR + + + V L TY Q R L +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 174 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 233
+H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE++
Sbjct: 128 LHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
+T Y T VD+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 186 ST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVSLPR 243
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
FP P + M L+ +L ++P+ R +A A H +
Sbjct: 244 GAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 145/329 (44%), Gaps = 79/329 (24%)
Query: 87 PKQTISYMAE--RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHP 144
P ++Y E +V+G+G FG V +A + + VA+K V +KR+ + + +R+L+H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 145 N----------VHY--------------------------SRASQRMPLIYVKLYTYQIC 168
+H Q L V+ + + I
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSIL 210
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSRYYRA 227
+ L +H + H D+KP+N+L+ +K+ DFGS+ + + I SR+YRA
Sbjct: 211 QCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRA 267
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCM 287
PE+I GA Y +D+WS+GC+LAELL G PL PGE DQL +I++LG P + K +
Sbjct: 268 PEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ---KLL 323
Query: 288 NPNYTEFKFPQIKAHPWH------------------KIFHKRMPPEA------------- 316
+ + F K +P + + R PPE+
Sbjct: 324 DASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383
Query: 317 --VDLVSRLLQYSPNLRCTALEACIHPFF 343
+D + + L++ P +R T +A HP+
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 131/293 (44%), Gaps = 57/293 (19%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------------RELQTMRLLD--- 142
+G G++G V++A+ +G VA+K V R N RE+ +R L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 143 HPNV-------HYSRASQRMPLIYV------KLYTY-------------------QICRA 170
HPNV SR + + + V L TY Q R
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
L ++H + HRD+KP+N+LV VKL DFG A++ + + +YRAPE+
Sbjct: 133 LDFLHANC-IVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
Query: 231 IFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 290
+ +T Y T VD+WSVGC+ AE+ +PLF G S DQL +I ++G P ++ + +
Sbjct: 191 LLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-RDVS 248
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
FP P + M L+ +L ++P+ R +A A H +
Sbjct: 249 LPRGAFPPRGPRPVQSVV-PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 117/238 (49%), Gaps = 40/238 (16%)
Query: 146 VHYSRASQ------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHT 196
+ + RAS+ ++P VK YQI + Y+H V HRD+KP N+LV P
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPER 168
Query: 197 HQVKLCDFGSAKVL---VKGEPNIS-YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAE 252
+VK+ D G A++ +K ++ + + +YRAPEL+ GA YT A+DIW++GC+ AE
Sbjct: 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE 228
Query: 253 LLLGQPLF---------PGESGVDQLVEIIKVLGTPTR---EEIKCMNPNYTEFKFPQ-- 298
LL +P+F DQL I V+G P E+IK M + T K +
Sbjct: 229 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN 288
Query: 299 -------IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
IK HK+ + +A L+ +LL P R T+ +A P+F L DP
Sbjct: 289 TYTNCSLIKYMEKHKV---KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF--LEDP 341
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 146 VH------------------YSRASQRMPLIYVKLYT--------YQICRALAYIHGGIG 179
+ Y+ +I K ++ Q+ + Y+H
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-K 170
Query: 180 VCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +++ DFG + + I + YY APE++ G Y
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--Y 228
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G + D L ++ K YT F+ P
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 273
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
Q W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 274 Q-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 146 VH------------------YSRASQRMPLIYVKLYT--------YQICRALAYIHGGIG 179
+ Y+ +I K ++ Q+ + Y+H
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-K 169
Query: 180 VCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +++ DFG + + I + YY APE++ G Y
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--Y 227
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G + D L ++ K YT F+ P
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 272
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
Q W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 273 Q-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 146 VH------------------YSRASQRMPLIYVKLYT--------YQICRALAYIHGGIG 179
+ Y+ +I K ++ Q+ + Y+H
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-K 146
Query: 180 VCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +++ DFG + + I + YY APE++ G Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--Y 204
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G + D L ++ K YT F+ P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 249
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
Q W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 250 Q-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 150/355 (42%), Gaps = 79/355 (22%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRY-------------- 130
G+P + Y+ R +G G F V+ AK + VA+K V DK Y
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 131 ---KNRELQTM------RLLDHPN------VHY---------------SRASQR-MPLIY 159
N + +M +LLDH N VH + R +PLIY
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVKGE 214
VK + Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 215 PNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESG------VDQ 268
+ I +R YR+PE++ GA + DIWS C++ EL+ G LF + G D
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 269 LVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FHKRMPPE 315
+ +II++LG T T + + N ++ KF ++ K F K E
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 316 AVDLVSRLLQYSPNLRCTALEACIHPFF------DELRDPNARL-PNGRPFPPLF 363
D +S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 150/355 (42%), Gaps = 79/355 (22%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRY-------------- 130
G+P + Y+ R +G G F V+ AK + VA+K V DK Y
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 131 ---KNRELQTM------RLLDHPN------VHY---------------SRASQR-MPLIY 159
N + +M +LLDH N VH + R +PLIY
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIY 132
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-----PHTHQVKLCDFGSAKVLVKGE 214
VK + Q+ L Y+H G+ H DIKP+N+L+ + Q+K+ D G+A E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDE 190
Query: 215 PNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESG------VDQ 268
+ I +R YR+PE++ GA + DIWS C++ EL+ G LF + G D
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 269 LVEIIKVLG------------TPTREEIKCMNPNYTEFKFPQIKAHPWHKI-FHKRMPPE 315
+ +II++LG T T + + N ++ KF ++ K F K E
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 309
Query: 316 AVDLVSRLLQYSPNLRCTALEACIHPFF------DELRDPNARL-PNGRPFPPLF 363
D +S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 310 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 141/300 (47%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 157
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+ TE +
Sbjct: 158 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSAC 213
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 214 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 254
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 255 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 302
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 141/300 (47%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 153
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+ TE +
Sbjct: 154 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL---TEKSAC 209
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 210 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 250
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 251 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 298
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS 215
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 216 -DLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL-----------------EYDFPE 255
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 256 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 146 VH------------------YSRASQRMPLIYVKLYT--------YQICRALAYIHGGIG 179
+ Y+ +I K ++ Q+ + Y+H
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN-K 152
Query: 180 VCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +++ DFG + + I + YY APE++ G Y
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT--Y 210
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G + D L ++ K YT F+ P
Sbjct: 211 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 255
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
Q W K++ A DL+ ++L Y P++R +A +A H +
Sbjct: 256 Q-----W-----KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 154
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K +++ + Y +PEL+ TE +
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL---TEKSAC 210
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 211 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 251
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 252 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 141/298 (47%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 --------NVHY--SRASQRMPLIYVK-----------LYTYQICRALAYIHGGIGVCHR 183
+++ S A L Y++ YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K S++ + Y +PEL+ + + +
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-SKS 214
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 215 SDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 255
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 256 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 154
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 210
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 211 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 251
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 252 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 154
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 210
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 211 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 251
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 252 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 212
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 213 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 253
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 254 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 212
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 213 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 253
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 254 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 212
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 213 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 253
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 254 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 97
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 98 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 156
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 157 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 212
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 213 KSSDLWALGCIIYQLVAGLP--PFRAGNEGLIFAKIIKL-----------------EYDF 253
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 254 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 98
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 99 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 157
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 158 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 213
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 214 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 254
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 255 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 302
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 94
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 95 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 153
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 154 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 209
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 210 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 250
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 251 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 298
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 73
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 133 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 191
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 192 -DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 231
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 232 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ-------DKRYKNRELQTMRLLDHPN 145
Y +RV+G+GSFG V K TG+ A+K + + DK RE+Q ++ LDHPN
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 146 VH------------------YSRASQRMPLIYVKLYT--------YQICRALAYIHGGIG 179
+ Y+ +I K ++ Q+ + Y H
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN-K 146
Query: 180 VCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +++ DFG + + I + YY APE++ G Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT--Y 204
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G + D L ++ K YT F+ P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK--------------GKYT-FELP 249
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
Q W K++ A DL+ + L Y P+ R +A +A H +
Sbjct: 250 Q-----W-----KKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 74
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 75 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 133
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 134 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 192
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 193 -DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 232
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 233 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 102
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 103 YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 161
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 162 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 217
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 218 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 258
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 259 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 306
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 79
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 80 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 138
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 139 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 197
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 198 -DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 237
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 238 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 283
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 75
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 76 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 134
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 135 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 193
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 194 -DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 233
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 234 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 279
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 78/298 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 72
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 73 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 131
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTTA 240
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ + ++
Sbjct: 132 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS 190
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ FP+
Sbjct: 191 -DLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDFPE 230
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 231 -------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 276
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 139/300 (46%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 95
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 96 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 154
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 155 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 210
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 211 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 251
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P+ K F P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 252 PE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 299
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 82/300 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKR--YKNRELQTMRLLDHP----- 144
+++G+GSF V A+ L T AIK ++++ + Y RE M LDHP
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL 100
Query: 145 ------------NVHYSRASQRMPLIY---------VKLYTYQICRALAYIHGGIGVCHR 183
+ Y++ + + I + YT +I AL Y+HG G+ HR
Sbjct: 101 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK-GIIHR 159
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL---VKGEPNISYICSRYYRAPELIFGATEYTT- 239
D+KP+N+L+N H +++ DFG+AKVL K ++ + Y +PEL+ TE +
Sbjct: 160 DLKPENILLNEDMH-IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL---TEKSAC 215
Query: 240 -AVDIWSVGCVLAELLLGQPLFPGESGVDQLV--EIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+W++GC++ +L+ G P P +G + L+ +IIK+ E+ F
Sbjct: 216 KSSDLWALGCIIYQLVAGLP--PFRAGNEYLIFQKIIKL-----------------EYDF 256
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRL--LQYSPNLRCTALEAC----IHPFFDELRDPN 350
P P+A DLV +L L + L C +E HPFF+ + N
Sbjct: 257 PAA------------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 304
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 138/329 (41%), Gaps = 92/329 (27%)
Query: 98 VVGQGSFGIVFQAKCLET---GETVAIKKVLQDKRYKNRELQTMRLLDHPNVHYSRASQR 154
+G+G+FG V + C++ G VA+K V RY +++L+H N ++ R
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 155 ------------------------------------MPLIYVKLYTYQICRALAYIHGGI 178
L +++ YQIC+++ ++H
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 179 GVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEPNI 217
+ H D+KP+N+L +NP +K+ DFGSA E +
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEHHS 192
Query: 218 SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
+ + +R+YRAPE+I A ++ D+WS+GC+L E LG +FP + L + ++LG
Sbjct: 193 TLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 278 ---------TPTREEIKCMNPNYTEF----KFPQIKAHPWHKIF------HKRMPPEAVD 318
T R+ ++ E ++ P + H+R+ D
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL----FD 307
Query: 319 LVSRLLQYSPNLRCTALEACIHPFFDELR 347
L+ ++L+Y P R T EA HPFFD L+
Sbjct: 308 LIQKMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 137/329 (41%), Gaps = 92/329 (27%)
Query: 98 VVGQGSFGIVFQAKCLET---GETVAIKKVLQDKRYKNRELQTMRLLDHPNVHYSRASQR 154
+G+G+FG V + C++ G VA+K V RY +++L+H N ++ R
Sbjct: 21 TLGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFR 78
Query: 155 ------------------------------------MPLIYVKLYTYQICRALAYIHGGI 178
L +++ YQIC+++ ++H
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN- 137
Query: 179 GVCHRDIKPQNLL---------------------VNPHTHQVKLCDFGSAKVLVKGEPNI 217
+ H D+KP+N+L +NP +K+ DFGSA E +
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEHHS 192
Query: 218 SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
+ + R+YRAPE+I A ++ D+WS+GC+L E LG +FP + L + ++LG
Sbjct: 193 TLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 278 ---------TPTREEIKCMNPNYTEF----KFPQIKAHPWHKIF------HKRMPPEAVD 318
T R+ ++ E ++ P + H+R+ D
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL----FD 307
Query: 319 LVSRLLQYSPNLRCTALEACIHPFFDELR 347
L+ ++L+Y P R T EA HPFFD L+
Sbjct: 308 LIQKMLEYDPAKRITLREALKHPFFDLLK 336
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 126/299 (42%), Gaps = 65/299 (21%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVH--- 147
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 148 ---------------YSRASQRMPLIYVKLYT-YQICRALAYIHGGI------GVCHRDI 185
Y+ +I K ++ + R + + GI + HRD+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 186 KPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
KP+N+L+ +K+ DFG + + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS G +L LL G P F G++ D L K + F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAFDLPQ----- 245
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPL 362
W I +A DL+ ++L + P+LR TA + HP+ ++ ++ P P L
Sbjct: 246 WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETPTISDLPSL 296
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 49/228 (21%)
Query: 81 GGRN-GQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE--- 134
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNRE
Sbjct: 2 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 60
Query: 135 --LQTMRLLDHPNVHYSR---------ASQRMPLIY------------------------ 159
+Q M+ L+HPNV +R A +PL+
Sbjct: 61 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120
Query: 160 --VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVKGEP 215
++ I AL Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE
Sbjct: 121 GPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLG-QPLFPG 262
++ + Y APEL+ +YT VD WS G + E + G +P P
Sbjct: 180 CTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 62/279 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVH--- 147
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 148 ---------------YSRASQRMPLIYVKLYT-YQICRALAYIHGGI------GVCHRDI 185
Y+ +I K ++ + R + + GI + HRD+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 186 KPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
KP+N+L+ +K+ DFG + + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS G +L LL G P F G++ D L K + F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAFDLPQ----- 245
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W I +A DL+ ++L + P+LR TA + HP+
Sbjct: 246 WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 106/228 (46%), Gaps = 49/228 (21%)
Query: 81 GGRN-GQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE--- 134
GGR+ P QT M ER+ G G FG V + +TGE VAIK+ Q+ KNRE
Sbjct: 3 GGRSPSLPTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWC 61
Query: 135 --LQTMRLLDHPNVHYSR---------ASQRMPLIY------------------------ 159
+Q M+ L+HPNV +R A +PL+
Sbjct: 62 LEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 121
Query: 160 --VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV--KLCDFGSAKVLVKGEP 215
++ I AL Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE
Sbjct: 122 GPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLG-QPLFPG 262
++ + Y APEL+ +YT VD WS G + E + G +P P
Sbjct: 181 CTEFVGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 62/279 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVH--- 147
++G+GSFG V + K T + A+K V+ KN RE++ ++ LDHPN+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 148 ---------------YSRASQRMPLIYVKLYT-YQICRALAYIHGGI------GVCHRDI 185
Y+ +I K ++ + R + + GI + HRD+
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 186 KPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
KP+N+L+ +K+ DFG + + I + YY APE++ G Y D+
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDV 205
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS G +L LL G P F G++ D L K + F PQ
Sbjct: 206 WSAGVILYILLSGTPPFYGKNEYDIL---------------KRVETGKYAFDLPQ----- 245
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W I +A DL+ ++L + P+LR TA + HP+
Sbjct: 246 WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 62/281 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPN-VHYSRAS 152
V+G+G++GIV+ + L +AIK++ + D RY + E+ + L H N V Y +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 153 QRMPLI----------------------------YVKLYTYQICRALAYIHGGIGVCHRD 184
I + YT QI L Y+H + HRD
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRD 147
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELIF-GATEYTTAVD 242
IK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y A D
Sbjct: 148 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
IWS+GC + E+ G+P F + P FK K H
Sbjct: 208 IWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVGMFKVH 244
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
P + M EA + + + P+ R A + + F
Sbjct: 245 PE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 282
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 62/281 (22%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQ-DKRYK---NRELQTMRLLDHPN-VHYSRAS 152
V+G+G++GIV+ + L +AIK++ + D RY + E+ + L H N V Y +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 153 QRMPLI----------------------------YVKLYTYQICRALAYIHGGIGVCHRD 184
I + YT QI L Y+H + HRD
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRD 133
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-NISYICSRYYRAPELIF-GATEYTTAVD 242
IK N+L+N ++ +K+ DFG++K L P ++ + Y APE+I G Y A D
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 193
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
IWS+GC + E+ G+P F + P FK K H
Sbjct: 194 IWSLGCTIIEMATGKPPF-----------------------YELGEPQAAMFKVGMFKVH 230
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
P + M EA + + + P+ R A + + F
Sbjct: 231 PE---IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV---------NPHTH------ 197
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 150 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 208
Query: 198 ---QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+++ DFGSA E + + + +R+YR PE+I + D+WS+GC+L E
Sbjct: 209 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYY 265
Query: 255 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 301
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 266 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 325
Query: 302 HPWHKIFHKRMPPEAV---DLVSRLLQYSPNLRCTALEACIHPFF 343
P K + + E V DL+ R+L++ P R T EA +HPFF
Sbjct: 326 KPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV---------NPH-------- 195
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 127 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 185
Query: 196 -THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+++ DFGSA E + + + +R+YR PE+I + D+WS+GC+L E
Sbjct: 186 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYY 242
Query: 255 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 301
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 243 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 302
Query: 302 HPWHKIFHKRMPPEAV---DLVSRLLQYSPNLRCTALEACIHPFF 343
P K + + E V DL+ R+L++ P R T EA +HPFF
Sbjct: 303 KPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 39/225 (17%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV---------NPHTH------ 197
Q PL +V+ YQ+C AL ++H + H D+KP+N+L N H
Sbjct: 118 QPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176
Query: 198 ---QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+++ DFGSA E + + + +R+YR PE+I + D+WS+GC+L E
Sbjct: 177 KNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYY 233
Query: 255 LGQPLFPGESGVDQLVEIIKVLG-------TPTREEIK------CMNPNYTEFKFPQIKA 301
G LF + LV + K+LG TR++ + N ++ ++ +
Sbjct: 234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENC 293
Query: 302 HPWHKIFHKRMPPEAV---DLVSRLLQYSPNLRCTALEACIHPFF 343
P K + + E V DL+ R+L++ P R T EA +HPFF
Sbjct: 294 KPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKN---RELQTMRLLDHP 144
++ E+ +G+G F V++A CL G VA+KKV L D + + +E+ ++ L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 145 NV------------------------------HYSRASQRMPLIYVKLYTYQICRALAYI 174
NV H+ + + +P V Y Q+C AL ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV-KGEPNISYICSRYYRAPELIFG 233
H V HRDIKP N+ + T VKL D G + K S + + YY +PE I
Sbjct: 153 HSR-RVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH- 209
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGE 263
Y DIWS+GC+L E+ Q F G+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 89/190 (46%), Gaps = 33/190 (17%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSR- 223
QI AL Y+H G+CHRDIKP+N L + + + ++KL DFG +K K Y +
Sbjct: 176 QIFSALHYLHNQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK 234
Query: 224 ----YYRAPELIFGATE-YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
Y+ APE++ E Y D WS G +L LL+G FPG + D + +++
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN---- 290
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC 338
+++ NPNY + P A DL+S LL + + R A+ A
Sbjct: 291 ---KKLCFENPNYN------------------VLSPLARDLLSNLLNRNVDERFDAMRAL 329
Query: 339 IHPFFDELRD 348
HP+ + D
Sbjct: 330 QHPWISQFSD 339
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDK----------RYKNRELQTMRLLD 142
Y + +GQGS+G+V A +T AIK + ++K R K E++ M+ L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT-EVRLMKKLH 86
Query: 143 HPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
HPN+ R+ +Y IC + HGG
Sbjct: 87 HPNI------ARLYEVYED--EQYICLVMELCHGG 113
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 133/313 (42%), Gaps = 67/313 (21%)
Query: 88 KQTISYMAERV--VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMR 139
K +S M +RV +G G++G V + T AIK + + + E+ ++
Sbjct: 32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLK 91
Query: 140 LLDHPNVH------------------------YSRASQRMPL--IYVKLYTYQICRALAY 173
LLDHPN+ + RM + + Q+ + Y
Sbjct: 92 LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTY 151
Query: 174 IHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELI 231
+H + HRD+KP+NLL+ +K+ DFG + V + + + YY APE++
Sbjct: 152 LHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
+Y D+WS+G +L LL G P F G++ DQ EI++ K Y
Sbjct: 211 --RKKYDEKCDVWSIGVILFILLAGYPPFGGQT--DQ--EILR----------KVEKGKY 254
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
T F P+ W K + A DL+ ++LQ+ R +A +A HP+ E+ +
Sbjct: 255 T-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM---CS 300
Query: 352 RLPNGRPFPPLFN 364
+ +G P L N
Sbjct: 301 KKESGIELPSLAN 313
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 39/237 (16%)
Query: 156 PLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ----------------- 198
P+ V+ +Q+C+A+ ++H + H D+KP+N+L ++
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDN-KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKST 193
Query: 199 -VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
V++ DFGSA E + + + +R+YRAPE+I ++ D+WS+GC++ E +G
Sbjct: 194 AVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGF 250
Query: 258 PLFPGESGVDQLVEIIKVLG-TPTREEIKC------------MNPNYTEFKFPQIKAHPW 304
LF + L + ++LG P+R K + N + ++ + P
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPL 310
Query: 305 HKIFHKRMPP--EAVDLVSRLLQYSPNLRCTALEACIHPFFDELRD--PNARLPNGR 357
+ + DL+ +L+Y P R T EA HPFF LR PN + R
Sbjct: 311 RRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPPNKLWDSSR 367
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 166 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 224 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 259
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 260 VVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 166 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 224 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 259
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 260 VVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 106 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 164
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 165 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 223 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 258
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 259 VVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 166 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 224 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 259
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 260 VVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 113 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 171
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 172 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 230 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 265
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 266 VVDPKARFTTEEALRHPWLQD 286
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 145 NV--HYSRASQRMPLIYV------KLYTY-----------------QICRALAYIHGGIG 179
++ Y + +I V +L+ Y QI A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH-K 133
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
+ HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+I G
Sbjct: 134 IVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 240 AVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS G +L +L + F ES
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 145 NV--HYSRASQRMPLIYV------KLYTY-----------------QICRALAYIHGGIG 179
++ Y + +I V +L+ Y QI A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH-K 127
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
+ HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+I G
Sbjct: 128 IVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 240 AVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS G +L +L + F ES
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 145 NV--HYSRASQRMPLIYV------KLYTY-----------------QICRALAYIHGGIG 179
++ Y + +I V +L+ Y QI A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH-K 123
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
+ HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+I G
Sbjct: 124 IVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 240 AVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS G +L +L + F ES
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 291 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 349 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 384
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 385 VVDPKARFTTEEALRHPWLQD 405
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYKNR---ELQTMRLLDHP 144
+Y + +G+GSFG V A TG+ VA+K KVL + R E+ +RLL HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 145 NV--HYSRASQRMPLIYV------KLYTY-----------------QICRALAYIHGGIG 179
++ Y + +I V +L+ Y QI A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH-K 132
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
+ HRD+KP+NLL++ H + VK+ DFG + ++ G + S Y APE+I G
Sbjct: 133 IVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 240 AVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS G +L +L + F ES
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 33/201 (16%)
Query: 151 ASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAK 208
++R+ KLY YQ+ A+ Y+H G+ HRD+KP+N+L++ +K+ DFG +K
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 304
Query: 209 VLVKGEPNI-SYICSR-YYRAPELIF--GATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
+L GE ++ +C Y APE++ G Y AVD WS+G +L L G P F
Sbjct: 305 IL--GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 362
Query: 265 GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL 324
L +++I N+ P++ W ++ K A+DLV +LL
Sbjct: 363 TQVSL-----------KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLL 398
Query: 325 QYSPNLRCTALEACIHPFFDE 345
P R T EA HP+ +
Sbjct: 399 VVDPKARFTTEEALRHPWLQD 419
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 62/286 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----RELQTMRLLDHPNV- 146
+++ V+G G+F VF K TG+ A+K + + +++ E+ ++ + H N+
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 147 ----------HYSRASQRMP-------LIYVKLYT--------YQICRALAYIHGGIGVC 181
HY Q + ++ +YT Q+ A+ Y+H G+
Sbjct: 70 TLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-GIV 128
Query: 182 HRDIKPQNLL-VNPHTH-QVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYT 238
HRD+KP+NLL + P + ++ + DFG +K+ G +S C Y APE + Y+
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPE-VLAQKPYS 185
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
AVD WS+G + LL G P F E+ +L E IK Y EF+ P
Sbjct: 186 KAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK--------------EGYYEFESP- 229
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
F + A D + LL+ PN R T +A HP+ D
Sbjct: 230 ---------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ ++R+P + + + R LAY+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 106 KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 164
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y APE + G T Y+ DIWS+G L EL +G+
Sbjct: 165 LIDSMAN-SFVGTRSYMAPERLQG-THYSVQSDIWSMGLSLVELAVGR 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 65/283 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHP-NVHYSRA 151
+G+G++G+V + + + +G+ +A+K++ Q+++ +L +MR +D P V + A
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 152 SQRMPLIYV----------KLY------------------TYQICRALAYIHGGIGVCHR 183
R +++ K Y I +AL ++H + V HR
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELI---FGATEYTTA 240
D+KP N+L+N QVK+CDFG + LV + Y APE I Y+
Sbjct: 179 DVKPSNVLINA-LGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 300
DIWS+G + EL + + FP +S GTP ++ Q+
Sbjct: 238 SDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------LKQVV 271
Query: 301 AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHP--- 144
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 145 NVHYSRASQ-RMPLIY----------------------VKLYTYQICRALAYIHGGIGVC 181
+HY+ ++ ++ LI VK Y ++ AL ++H +G+
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS-LGII 148
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPELIFGATEYTTA 240
+RD+KP+N+L++ H +KL DFG +K + E C Y APE++ +T +
Sbjct: 149 YRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQS 206
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 279
D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 63/288 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVHYSRAS 152
+G+GS GIV A +G+ VA+KK+ D R + R E+ MR H NV S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 153 -------------------------QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKP 187
RM + + +AL+ +H GV HRDIK
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 275
Query: 188 QNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTAVDIWSV 246
++L+ H +VKL DFG + K P + + Y+ APELI Y VDIWS+
Sbjct: 276 DSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGPEVDIWSL 333
Query: 247 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 306
G ++ E++ G+P + E P + +K + N P K
Sbjct: 334 GIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNLP----------PRLK 368
Query: 307 IFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLP 354
HK + P + RLL P R TA E HPF + P + +P
Sbjct: 369 NLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 415
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 63/288 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVHYSRAS 152
+G+GS GIV A +G+ VA+KK+ D R + R E+ MR H NV S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 153 -------------------------QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKP 187
RM + + +AL+ +H GV HRDIK
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKS 198
Query: 188 QNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTAVDIWSV 246
++L+ H +VKL DFG + K P + + Y+ APELI Y VDIWS+
Sbjct: 199 DSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-SRLPYGPEVDIWSL 256
Query: 247 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 306
G ++ E++ G+P + E P + +K + N P K
Sbjct: 257 GIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNLP----------PRLK 291
Query: 307 IFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLP 354
HK + P + RLL P R TA E HPF + P + +P
Sbjct: 292 NLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 338
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 60/285 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNV-H 147
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 148 YSRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIGVCH 182
+ IY+ + + A+AY H + V H
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK-LNVAH 129
Query: 183 RDIKPQNLL--VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
RD+KP+N L + +KL DFG A G+ + + + YY +P+++ G Y
Sbjct: 130 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 187
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 300
D WS G ++ LL G P F + + +++I + GT F FP+
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT---------------FTFPE-- 228
Query: 301 AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
W + P+A L+ RLL SP R T+L+A H +F++
Sbjct: 229 -KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 125/303 (41%), Gaps = 67/303 (22%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 27 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 81
Query: 138 MRLLDHPNVHYSRAS-------------------------QRMPLIYVKLYTYQICRALA 172
MR H NV S RM + + +AL+
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 141
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 231
+H GV HRDIK ++L+ H +VKL DFG + K P + + Y+ APELI
Sbjct: 142 VLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 199
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
Y VDIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 200 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNL 243
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
P K HK + P + RLL P R TA E HPF + P +
Sbjct: 244 P----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 292
Query: 352 RLP 354
+P
Sbjct: 293 IVP 295
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 126/306 (41%), Gaps = 67/306 (21%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 25 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 79
Query: 138 MRLLDHPNVHYSRAS-------------------------QRMPLIYVKLYTYQICRALA 172
MR H NV S RM + + +AL+
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 139
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELI 231
+H GV HRDIK ++L+ H +VKL DFG + K P + + Y+ APELI
Sbjct: 140 VLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 197
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
Y VDIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 198 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNL 241
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
P K HK + P + RLL P R TA E HPF + P +
Sbjct: 242 P----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 290
Query: 352 RLPNGR 357
+P R
Sbjct: 291 IVPLMR 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 125/306 (40%), Gaps = 67/306 (21%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 70
Query: 138 MRLLDHPNVHYSRAS-------------------------QRMPLIYVKLYTYQICRALA 172
MR H NV S RM + + +AL+
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 130
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 231
+H GV HRDIK ++L+ H +VKL DFG + K P + Y+ APELI
Sbjct: 131 VLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 188
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
Y VDIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 189 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNL 232
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
P K HK + P + RLL P R TA E HPF + P +
Sbjct: 233 P----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 281
Query: 352 RLPNGR 357
+P R
Sbjct: 282 IVPLMR 287
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 125/306 (40%), Gaps = 67/306 (21%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P+ SY+ + +G+GS GIV A +G+ VA+KK+ D R + R E+
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFNEVVI 74
Query: 138 MRLLDHPNVHYSRAS-------------------------QRMPLIYVKLYTYQICRALA 172
MR H NV S RM + + +AL+
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 134
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 231
+H GV HRDIK ++L+ H +VKL DFG + K P + Y+ APELI
Sbjct: 135 VLHAQ-GVIHRDIKSDSILLT-HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI 192
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
Y VDIWS+G ++ E++ G+P + E P + +K + N
Sbjct: 193 -SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPLKAMKMIRDNL 236
Query: 292 TEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA 351
P K HK + P + RLL P R TA E HPF + P +
Sbjct: 237 P----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPAS 285
Query: 352 RLPNGR 357
+P R
Sbjct: 286 IVPLMR 291
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHP--- 144
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 145 NVHYSRASQ-RMPLIY----------------------VKLYTYQICRALAYIHGGIGVC 181
+HY+ ++ ++ LI VK Y ++ AL ++H +G+
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS-LGII 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPELIFGATEYTTA 240
+RD+KP+N+L++ H +KL DFG +K + E C Y APE++ +T +
Sbjct: 150 YRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQS 207
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 279
D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 208 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 40/220 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAI--KKVLQDKRYKNRELQTMRL-------LDHP--- 144
+V+GQGSFG VF K + + + KVL+ K R+ ++ ++HP
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 145 NVHYSRASQ-RMPLIY----------------------VKLYTYQICRALAYIHGGIGVC 181
+HY+ ++ ++ LI VK Y ++ AL ++H +G+
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS-LGII 148
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPELIFGATEYTTA 240
+RD+KP+N+L++ H +KL DFG +K + E C Y APE++ +T +
Sbjct: 149 YRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQS 206
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 279
D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 207 ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 60/285 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKRYKNRELQTMRLLDHPNV-H 147
Y E +G+GS+G V A T A KK+ ++D +E++ M+ LDHPN+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 148 YSRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIGVCH 182
+ IY+ + + A+AY H + V H
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK-LNVAH 146
Query: 183 RDIKPQNLL--VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
RD+KP+N L + +KL DFG A G+ + + + YY +P+++ G Y
Sbjct: 147 RDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL--YGPE 204
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 300
D WS G ++ LL G P F + + +++I + GT F FP+
Sbjct: 205 CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT---------------FTFPE-- 245
Query: 301 AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
W + P+A L+ RLL SP R T+L+A H +F++
Sbjct: 246 -KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 38/208 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DH 143
++ +++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
P + ++ ++ + L Y +I L ++H
Sbjct: 78 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATE 236
G+ +RD+K N+L++ H +K+ DFG K + G+ + C Y APE++ G +
Sbjct: 138 -GIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLG-QK 194
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGES 264
Y +VD WS G +L E+L+GQ F G+
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y ++ +G+G+F V A+ + TG VA+K + DK N RE++ M++L+H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 133
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ S Y APEL G
Sbjct: 134 Y-IVHRDLKAENLLLDGDMN-IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y S R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-KVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + D I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 125/288 (43%), Gaps = 63/288 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNV-----H 147
+G+GS GIV A+ +G VA+K + D R + R E+ MR H NV
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVK--MMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 148 YSRASQRMPLI-------------YVKLYTYQIC-------RALAYIHGGIGVCHRDIKP 187
Y + L+ V+L QI +ALAY+H GV HRDIK
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKS 169
Query: 188 QNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVDIWSV 246
++L+ +VKL DFG + K P + Y+ APE+I + Y T VDIWS+
Sbjct: 170 DSILLTLDG-RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVI-SRSLYATEVDIWSL 227
Query: 247 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHK 306
G ++ E++ G+P + +S V + + ++ P P++K HK
Sbjct: 228 GIMVIEMVDGEPPYFSDSPVQAM------------KRLRDSPP-------PKLKNS--HK 266
Query: 307 IFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLP 354
+ P D + R+L P R TA E HPF + P +P
Sbjct: 267 V-----SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 77/301 (25%)
Query: 87 PKQTI-SYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTM 138
PK ++ + R +G GSFG V + G A+K + L+ + N E +
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 139 RLLDHPNV--------------------------HYSRASQRMPLIYVKLYTYQICRALA 172
++ HP + R SQR P K Y ++C AL
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSR-YYRAPEL 230
Y+H + +RD+KP+N+L++ + H +K+ DFG AK + P+++Y +C Y APE+
Sbjct: 121 YLHSK-DIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLCGTPDYIAPEV 174
Query: 231 IFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 290
+ Y ++D WS G ++ E+L G F + + +I+
Sbjct: 175 V-STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN---------------- 217
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLL-----QYSPNLRCTALEACIHPFFDE 345
E +FP + DL+SRL+ Q NL+ + HP+F E
Sbjct: 218 -AELRFPPF------------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
Query: 346 L 346
+
Sbjct: 265 V 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 124/290 (42%), Gaps = 64/290 (22%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYIHGG 177
PN+ H S + + + L T QI ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 178 IGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG 233
G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + + Y +PE +
Sbjct: 123 -GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-VLR 179
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VD+W+ G +L LL+G P F E +L + IK
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GA 222
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ FP + W + PEA DL++++L +P R TA EA HP+
Sbjct: 223 YDFP---SPEWDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 123/291 (42%), Gaps = 68/291 (23%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNV- 146
++ +R +G G+FG V + +G IK + +D+ E++ ++ LDHPN+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 147 --------------------------HYSRASQRMPLI---YVKLYTYQICRALAYIHGG 177
A R + YV Q+ ALAY H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 178 IGVCHRDIKPQNLL---VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
V H+D+KP+N+L +PH+ +K+ DFG A++ E + + + Y APE+
Sbjct: 144 -HVVHKDLKPENILFQDTSPHS-PIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF--K 199
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+ T DIWS G V+ LL G F G S L E+ +++ PNY
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEV--------QQKATYKEPNYA-- 245
Query: 295 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
++ P + P+AVDL+ ++L P R +A + H +F +
Sbjct: 246 ----VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 125/284 (44%), Gaps = 67/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQ-TMRLLDHP-NVHYSRA 151
+G+G++G+V + + + +G+ +A+K++ Q+++ +L +MR +D P V + A
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 152 SQRMPLIYV----------KLY------------------TYQICRALAYIHGGIGVCHR 183
R +++ K Y I +AL ++H + V HR
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGATEYTT 239
D+KP N+L+N QVK+CDFG + LV +I C + Y APE I Y+
Sbjct: 135 DVKPSNVLINA-LGQVKMCDFGISGYLVDDVAKDIDAGC-KPYMAPERINPELNQKGYSV 192
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
DIWS+G + EL + + FP +S GTP ++ Q+
Sbjct: 193 KSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------LKQV 226
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 84/306 (27%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNV-- 146
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 147 -HYSRASQRMPLIYVKLYTY-----------------------------QICRALAYIHG 176
+ S + R I ++L QI +A++H
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 177 GIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNISYIC--- 221
+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 152 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 222 --SRYYRAPELIFGATE--YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
+ +RAPEL+ +T+ T ++DI+S+GCV +L + P + II+ G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR--G 267
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
+ +E+KC++ + + EA DL+S+++ + P R TA++
Sbjct: 268 IFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 338 CIHPFF 343
HP F
Sbjct: 308 LRHPLF 313
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 40/197 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVHYS 149
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 150 RAS------------------------QRMPL--IYVKLYTYQICRALAYIHGGIGVCHR 183
R + PL + + T+ + LAY+H + HR
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHR 178
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE--YTTAV 241
D+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I E Y V
Sbjct: 179 DVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 242 DIWSVGCVLAELLLGQP 258
D+WS+G EL +P
Sbjct: 235 DVWSLGITCIELAERKP 251
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 124/290 (42%), Gaps = 64/290 (22%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + + TG+ A K + +D + RE + RLL H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYIHGG 177
PN+ H S + + + L T QI ++ + H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 178 IGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG 233
G+ HRD+KP+NLL+ + VKL DFG A + V+G+ + + Y +PE +
Sbjct: 123 -GIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-VLR 179
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VD+W+ G +L LL+G P F E +L + IK
Sbjct: 180 KDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GA 222
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ FP + W + PEA DL++++L +P R TA EA HP+
Sbjct: 223 YDFP---SPEWDTV-----TPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 158
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 159 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 215
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 254
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 255 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 149
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 150 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 206
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 207 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 245
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 246 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 122/281 (43%), Gaps = 64/281 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV---HYS 149
+G+G+F +V + + G+ A K + +D + RE + RLL HPN+ H S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 150 RASQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIK 186
+ + + L T QI A+ + H +GV HRD+K
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ-MGVVHRDLK 148
Query: 187 PQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTAVD 242
P+NLL+ VKL DFG A + V+GE + + Y +PE + Y VD
Sbjct: 149 PENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVD 206
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+W+ G +L LL+G P F E +L + IK + FP +
Sbjct: 207 LWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYDFPSPE-- 247
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
W + PEA DL++++L +P+ R TA EA HP+
Sbjct: 248 -WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ S Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ S Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 84/306 (27%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNV-- 146
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 147 -HYSRASQRMPLIYVKLYTY-----------------------------QICRALAYIHG 176
+ S + R I ++L QI +A++H
Sbjct: 92 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 177 GIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNISYIC--- 221
+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 152 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 222 --SRYYRAPELIFGATE--YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
+ +RAPEL+ +T+ T ++DI+S+GCV +L + P + II+ G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNIIR--G 267
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
+ +E+KC++ + + EA DL+S+++ + P R TA++
Sbjct: 268 IFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPTAMKV 307
Query: 338 CIHPFF 343
HP F
Sbjct: 308 LRHPLF 313
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 38/203 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNV-- 146
+++G+GSFG VF A+ +T + AIK + +D + +++ TM R+L +HP +
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
++ ++ + L Y +I L ++H G+ +
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK-GIVY 142
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAV 241
RD+K N+L++ H +K+ DFG K + G+ + C Y APE++ G +Y +V
Sbjct: 143 RDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QKYNHSV 200
Query: 242 DIWSVGCVLAELLLGQPLFPGES 264
D WS G +L E+L+GQ F G+
Sbjct: 201 DWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK-RVIHR 136
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ + ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 137 DIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G P F + + I +V EF FP
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF---- 232
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++ + R T E HP+
Sbjct: 233 --------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 137
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 138 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 233
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 137
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 138 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 233
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 40/197 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPNVHYS 149
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ L HPN
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 150 RAS------------------------QRMPL--IYVKLYTYQICRALAYIHGGIGVCHR 183
R + PL + + T+ + LAY+H + HR
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHR 139
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATE--YTTAV 241
D+K N+L++ VKL DFGSA ++ P ++ + Y+ APE+I E Y V
Sbjct: 140 DVKAGNILLS-EPGLVKLGDFGSASIMA---PANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 242 DIWSVGCVLAELLLGQP 258
D+WS+G EL +P
Sbjct: 196 DVWSLGITCIELAERKP 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 39/217 (17%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------R 133
G + QP +Y + +G+G+F V A+ + TG VAIK + DK N R
Sbjct: 4 GSDEQP-HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFR 60
Query: 134 ELQTMRLLDHPNV--------------------------HYSRASQRMPLIYVKLYTYQI 167
E++ M++L+HPN+ Y A RM + QI
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 168 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 227
A+ Y H + HRD+K +NLL++ + +K+ DFG + G ++ S Y A
Sbjct: 121 VSAVQYCHQK-RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
PEL G VD+WS+G +L L+ G F G++
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 136
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 137 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 194 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 232
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 233 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 63/294 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHP---NVHYS-R 150
+G G+FG+V + TG A K V+ DK +E+QTM +L HP N+H +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 151 ASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVCHRDIKP 187
M +IY + Y Q+C+ L ++H H D+KP
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKP 283
Query: 188 QNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TEYTTAVDIWS 245
+N++ ++++KL DFG L + + + APE+ G Y T D+WS
Sbjct: 284 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWS 341
Query: 246 VGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
VG + LL G F GE+ + L +K + N + F I
Sbjct: 342 VGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSGISE---- 385
Query: 306 KIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP--NARLPNGR 357
+ D + +LL PN R T +A HP+ P ++++P+ R
Sbjct: 386 ---------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSR 430
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 131
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 132 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 188
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 189 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 227
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 228 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 137
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 138 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 233
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 63/294 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHP---NVHYS-R 150
+G G+FG+V + TG A K V+ DK +E+QTM +L HP N+H +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 151 ASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVCHRDIKP 187
M +IY + Y Q+C+ L ++H H D+KP
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKP 177
Query: 188 QNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TEYTTAVDIWS 245
+N++ ++++KL DFG L + + + APE+ G Y T D+WS
Sbjct: 178 ENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYT--DMWS 235
Query: 246 VGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
VG + LL G F GE+ + L +K + N + F I
Sbjct: 236 VGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAFSGISE---- 279
Query: 306 KIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP--NARLPNGR 357
+ D + +LL PN R T +A HP+ P ++++P+ R
Sbjct: 280 ---------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSR 324
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 40/220 (18%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIKKV------LQDKRYKNRELQTMRLLDHPNV- 146
+V+GQGSFG VF + + ++G A+K + ++D+ E + ++HP V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 147 --HYSRASQ-RMPLIY----------------------VKLYTYQICRALAYIHGGIGVC 181
HY+ ++ ++ LI VK Y ++ L ++H +G+
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS-LGII 152
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPELIFGATEYTTA 240
+RD+KP+N+L++ H +KL DFG +K + E C Y APE++ ++ +
Sbjct: 153 YRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV-NRQGHSHS 210
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV-LGTP 279
D WS G ++ E+L G F G+ + + I+K LG P
Sbjct: 211 ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMP 250
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 115/300 (38%), Gaps = 73/300 (24%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR--------- 133
R + K SY R +G G++G V K AIK + + + K R
Sbjct: 28 RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 134 --------ELQTMRLLDHPNV-HYSRASQRMPLIYVKLYTY------------------- 165
E+ ++ LDHPN+ + Y+ Y
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 166 ------QICRALAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNI 217
QI + Y+H + HRDIKP+N+L+ +K+ DFG + K
Sbjct: 148 AANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 218 SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLG 277
+ + YY APE++ +Y D+WS G ++ LL G P F G++ D + ++ K
Sbjct: 207 DRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEK--- 261
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
Y +F + W K + EA +L+ +L Y N RCTA EA
Sbjct: 262 ----------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYDYNKRCTAEEA 299
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ S Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-------RELQTMRLLDHPN 145
Y+ +G+GSFG V A +T + VA+K + + K+ RE+ ++LL HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 146 V-------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGV 180
+ Y +RM + + QI A+ Y H +
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH-KI 129
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTA 240
HRD+KP+NLL++ + + VK+ DFG + ++ G + S Y APE+I G
Sbjct: 130 VHRDLKPENLLLDDNLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 241 VDIWSVGCVLAELLLGQPLFPGE 263
VD+WS G VL +L+G+ F E
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 137
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 138 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDL 194
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 233
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 158
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 159 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDL 215
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 216 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 254
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 255 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 285
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ + Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 62/286 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVA-----IKKVLQDKRYKNRELQTMRLLDHPNV- 146
YM +G+G FGIV +C+ET +K D+ +E+ + + H N+
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 147 --HYSRAS-QRMPLIY-----------------------VKLYTYQICRALAYIHGGIGV 180
H S S + + +I+ + Y +Q+C AL ++H +
Sbjct: 65 HLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH-NI 123
Query: 181 CHRDIKPQNLLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
H DI+P+N++ + +K+ +FG A+ L G+ + Y APE + +T
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE-VHQHDVVST 182
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
A D+WS+G ++ LL G F E+ Q++E I MN YT
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAEYT------- 221
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ + K + EA+D V RLL R TA EA HP+ +
Sbjct: 222 ----FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK-RVIHR 136
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ + ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 137 DIKPENLLLGSNG-ELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDL 193
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G P F + + I +V EF FP
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EFTFPDF---- 232
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++ + R T E HP+
Sbjct: 233 --------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 133
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 134 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDL 190
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 229
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 230 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 133
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 134 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRM-HDEKVDL 190
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 191 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 229
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 230 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 134
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 135 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDL 191
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 230
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 231 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 121/316 (38%), Gaps = 72/316 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNV----------------------------HYSRASQRMPLIYVKLYTYQICRA 170
+ LD+P+V H R + P + + Q +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQG 154
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPE 229
+ Y+H V HRD+K NL +N VK+ DFG A K+ GE + + Y APE
Sbjct: 155 VQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
Query: 230 LIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 289
+ ++ VDIWS+GC+L LL+G+P F E C+
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSCLKE 249
Query: 290 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
Y K + P H + P A L+ R+L P LR + E FF P
Sbjct: 250 TYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
Query: 350 NARLPNG-RPFPPLFN 364
RLP PP F+
Sbjct: 303 -MRLPTSCLTVPPRFS 317
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 137
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE I G + VD+
Sbjct: 138 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRX-HDEKVDL 194
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 195 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 233
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 234 --------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA++ + DK N RE++ M++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G + S Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE +
Sbjct: 120 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTL 177
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 178 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 217
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 218 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQELKGASKELLSKL 381
FF P ARLP PP F+ P L ++++ L+ L
Sbjct: 268 DEFFTSGYIP-ARLPITCLTIPPXFSIAPSSLDPSNRKPLTVL 309
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 122/306 (39%), Gaps = 69/306 (22%)
Query: 79 TIGGRNGQPKQTISYMAERV---------VGQGSFGIVFQAKCLETGETVAIK----KVL 125
++ NG+ + AE + +G G+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 126 QDKRYK-NRELQTMRLLDHPNV-----------HYSRASQRMP-------LIYVKLYT-- 164
+ K E+ +R + H N+ H Q + ++ YT
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK 120
Query: 165 ------YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKL--CDFGSAKVLVKGEPN 216
Q+ A+ Y+H +G+ HRD+KP+NLL + K+ DFG +K+ KG+
Sbjct: 121 DASTLIRQVLDAVYYLHR-MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 217 ISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVL 276
+ + Y APE + Y+ AVD WS+G + LL G P F E+ +I+K
Sbjct: 180 STACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKA- 237
Query: 277 GTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALE 336
EF P W I A D + L++ PN R T +
Sbjct: 238 --------------EYEFDSPY-----WDDI-----SDSAKDFIRNLMEKDPNKRYTCEQ 273
Query: 337 ACIHPF 342
A HP+
Sbjct: 274 AARHPW 279
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 120/316 (37%), Gaps = 72/316 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNV----------------------------HYSRASQRMPLIYVKLYTYQICRA 170
+ LD+P+V H R + P + + Q +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQG 154
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPE 229
+ Y+H V HRD+K NL +N VK+ DFG A K+ GE + Y APE
Sbjct: 155 VQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 212
Query: 230 LIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 289
+ ++ VDIWS+GC+L LL+G+P F E C+
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSCLKE 249
Query: 290 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
Y K + P H + P A L+ R+L P LR + E FF P
Sbjct: 250 TYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
Query: 350 NARLPNG-RPFPPLFN 364
RLP PP F+
Sbjct: 303 -MRLPTSCLTVPPRFS 317
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 120/316 (37%), Gaps = 72/316 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 139 RLLDHPNV----------------------------HYSRASQRMPLIYVKLYTYQICRA 170
+ LD+P+V H R + P + + Q +
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQG 138
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPE 229
+ Y+H V HRD+K NL +N VK+ DFG A K+ GE + Y APE
Sbjct: 139 VQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 196
Query: 230 LIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 289
+ ++ VDIWS+GC+L LL+G+P F E C+
Sbjct: 197 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSCLKE 233
Query: 290 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
Y K + P H + P A L+ R+L P LR + E FF P
Sbjct: 234 TYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 286
Query: 350 NARLPNG-RPFPPLFN 364
RLP PP F+
Sbjct: 287 -MRLPTSCLTVPPRFS 301
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 132
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 133 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM-HDEKVDL 189
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 190 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 228
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 229 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 80/286 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 133
Query: 184 DIKPQNLLVNPHTHQVKLCDFG-------SAKVLVKGEPNISYICSRYYRAPELIFGATE 236
DIKP+NLL+ ++K+ DFG S + + G + Y PE+I G
Sbjct: 134 DIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD--------YLPPEMIEGRM- 183
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
+ VD+WS+G + E L+G+P F + + I +V EF F
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTF 226
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
P + A DL+SRLL+++P+ R E HP+
Sbjct: 227 PDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN+
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 129
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 130 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 186
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 187 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 225
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 226 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE +
Sbjct: 120 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTL 177
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 178 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 217
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 218 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 267
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQELKGASKELLSKL 381
FF P ARLP PP F+ P L ++++ L+ L
Sbjct: 268 DEFFTSGYIP-ARLPITCLTIPPRFSIAPSSLDPSNRKPLTVL 309
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 120/316 (37%), Gaps = 72/316 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-------KRYKNRELQTM 138
P+ YM R +G+G F ++ ++T E A K V + K + E+
Sbjct: 37 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 96
Query: 139 RLLDHPNV----------------------------HYSRASQRMPLIYVKLYTYQICRA 170
+ LD+P+V H R + P + + Q +
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP--EARYFMRQTIQG 154
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISYICSRYYRAPE 229
+ Y+H V HRD+K NL +N VK+ DFG A K+ GE + Y APE
Sbjct: 155 VQYLHNN-RVIHRDLKLGNLFLNDDM-DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE 212
Query: 230 LIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNP 289
+ ++ VDIWS+GC+L LL+G+P F E C+
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------ETSCLKE 249
Query: 290 NYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDP 349
Y K + P H + P A L+ R+L P LR + E FF P
Sbjct: 250 TYIRIKKNEYSV-PRH------INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
Query: 350 NARLPNG-RPFPPLFN 364
RLP PP F+
Sbjct: 303 -MRLPTSCLTVPPRFS 317
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 58/273 (21%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKN--RELQTMRLLDHP---NV 146
R +G+GSFG V + +T + A+K K ++ +N +ELQ M+ L+HP N+
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 147 HYS-RASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCHR 183
YS + + M ++ VKL+ ++ AL Y+ + HR
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ-RIIHR 139
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG--ATEYTTAV 241
D+KP N+L++ H H V + DF A +L + + ++ Y APE+ Y+ AV
Sbjct: 140 DMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAV 198
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP--------TREEI----KCMNP 289
D WS+G ELL G+ + S EI+ T ++E + K + P
Sbjct: 199 DWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEMVSLLKKLLEP 257
Query: 290 N----YTEF----KFPQIKAHPWHKIFHKRMPP 314
N +++ FP + W +F KR+ P
Sbjct: 258 NPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG VAIK + DK N RE++ M++L+H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A RM + QI A+ Y H
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ + Y APEL G
Sbjct: 134 -RIVHRDLKAENLLLDADMN-IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE +
Sbjct: 124 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKTL 181
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 182 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 221
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 222 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 271
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQELKGASKELLSKL 381
FF P ARLP PP F+ P L ++++ L+ L
Sbjct: 272 DEFFTSGYIP-ARLPITCLTIPPRFSIAPSSLDPSNRKPLTVL 313
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 121/298 (40%), Gaps = 65/298 (21%)
Query: 82 GRNGQPKQTISYMAERV--VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ 133
GR Q +S +RV +G G++G V K TG AIK + +
Sbjct: 10 GRENLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 134 -ELQTMRLLDHPNV-----------HYSRA---------------SQRMPLIYVKLYTYQ 166
E+ ++ LDHPN+ +Y Q+ + + Q
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
+ Y+H + HRD+KP+NLL+ + +K+ DFG + G + + Y
Sbjct: 130 VLSGTTYLHKH-NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 188
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE++ +Y D+WS G +L LL G P F G++ DQ ++L + +
Sbjct: 189 YIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKF 239
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
P++T+ + EA LV +L Y P+ R +A EA HP+
Sbjct: 240 SFDPPDWTQ------------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 279
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 134
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ +FG + V + + Y PE+I G + VD+
Sbjct: 135 DIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 191
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 192 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 230
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 231 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 64/289 (22%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDH 143
T Y +G+G+F +V + L TG A K + +D + RE + RLL H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 144 PNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYIHGG 177
N+ H S + + + L T QI A+ + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ- 121
Query: 178 IGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFG 233
+GV HRD+KP+NLL+ VKL DFG A + V+G+ + + Y +PE +
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE-VLR 179
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VDIW+ G +L LL+G P F E +L + IK
Sbjct: 180 KEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA----------------GA 222
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ FP + W + PEA +L++++L +P R TA EA HP+
Sbjct: 223 YDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ +A+K + + + K RE++ L HPN+
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 147 -HYSRASQRMPLI---------YVKL-------------YTYQICRALAYIHGGIGVCHR 183
Y + R+ LI Y +L Y ++ AL+Y H V HR
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK-RVIHR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ +FG + V + + Y PE+I G + VD+
Sbjct: 136 DIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM-HDEKVDL 192
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
WS+G + E L+G+P F + + I +V EF FP
Sbjct: 193 WSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EFTFPDF---- 231
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ A DL+SRLL+++P+ R E HP+
Sbjct: 232 --------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 64/280 (22%)
Query: 99 VGQGSFGIVFQ-AKCLETGETVAI-----KKVLQDKRYKNRELQTMRLLDHPNV---HYS 149
+G+G+F +V + K L E A+ K +D + RE + RLL HPN+ H S
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 150 RASQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIK 186
+ + + L T QI A+ + H +GV HR++K
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ-MGVVHRNLK 137
Query: 187 PQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAPELIFGATEYTTAVD 242
P+NLL+ VKL DFG A + V+GE + + Y +PE + Y VD
Sbjct: 138 PENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VLRKDPYGKPVD 195
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+W+ G +L LL+G P F E +L + IK + FP +
Sbjct: 196 LWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA----------------GAYDFPSPE-- 236
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W + PEA DL++++L +P+ R TA EA HP+
Sbjct: 237 -WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPW 270
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 119/287 (41%), Gaps = 66/287 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 145 N------VHYSRASQRMPLIYV---KLYTYQIC-----------RALAYIHGGIGVCHR- 183
+ V + + M + YV +L+ Y IC R I G+ CHR
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDY-ICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 184 -----DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
D+KP+N+L++ H + K+ DFG + ++ GE S Y APE+I G
Sbjct: 136 MVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAG 194
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
VDIWS G +L LL G F + PT + C YT PQ
Sbjct: 195 PEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFKKICDGIFYT----PQ 237
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ P + L+ +LQ P R T + H +F +
Sbjct: 238 Y------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 115 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 173
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQL 269
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+ SG +
Sbjct: 174 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 270 VEII 273
E++
Sbjct: 232 FELL 235
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 158 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 216
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 217 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 135/314 (42%), Gaps = 76/314 (24%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK-----------KVLQDKRYKNRELQTMR--- 139
+V+G G++G VF + + +TG+ A+K K + R + + L+ +R
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 140 -----------------LLDHPN-----VHYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
+LD+ N H S+ +R V++Y +I AL ++H
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQ-RERFTEHEVQIYVGEIVLALEHLHK- 177
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-ICSRY-YRAPELIFGA- 234
+G+ +RDIK +N+L++ + H V L DFG +K V E +Y C Y AP+++ G
Sbjct: 178 LGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
+ + AVD WS+G ++ ELL G F + + EI +R +K P
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILKSEPP----- 284
Query: 295 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFFDELR-D 348
+PQ M A DL+ RLL P R A E H FF ++ D
Sbjct: 285 -YPQ------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD 331
Query: 349 PNARLPNGRPFPPL 362
A PF P+
Sbjct: 332 DLAAKKVPAPFKPV 345
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 88/310 (28%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNV-- 146
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 147 -HYSRASQRMPLIYVKLYTY-----------------------------QICRALAYIHG 176
+ S + R I ++L QI +A++H
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 177 GIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNISYIC--- 221
+ + HRD+KPQN+LV+ + ++ + DFG K L G+ +
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 222 --SRYYRAPELIFGATEYTT------AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
+ +RAPEL+ + T ++DI+S+GCV +L + P + II
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNII 251
Query: 274 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+ G + +E+KC++ + + EA DL+S+++ + P R T
Sbjct: 252 R--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPT 289
Query: 334 ALEACIHPFF 343
A++ HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 123 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 181
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 182 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 41/212 (19%)
Query: 85 GQPKQTISYMAERV-VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQT 137
G P++ Y+A + +G+GS GIV A TG+ VA+KK+ D R + R E+
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVI 95
Query: 138 MRLLDHPNV--HYSR-----------------------ASQRMPLIYVKLYTYQICRALA 172
MR H NV YS RM + + RAL+
Sbjct: 96 MRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALS 155
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELI 231
Y+H GV HRDIK ++L+ ++KL DFG + K P + Y+ APE+I
Sbjct: 156 YLHNQ-GVIHRDIKSDSILLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI 213
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLFPGE 263
Y T VDIWS+G ++ E++ G+P + E
Sbjct: 214 -SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 96 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 154
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQ 268
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+ P+ P ++ D
Sbjct: 155 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS 212
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ M++L+H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A M + QI A+ Y H
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQK 125
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ S Y APEL G
Sbjct: 126 F-IVHRDLKAENLLLDADMN-IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 39/212 (18%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLL----DHPNV-- 146
RV+G+GSFG V A+ ETG+ A+K + +D ++ +++ TM R+L +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + S+R + Y +I AL ++H G+ +
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK-GIIY 147
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFGATEYTTAV 241
RD+K N+L++ H KL DFG K + G ++ + Y APE I Y AV
Sbjct: 148 RDLKLDNVLLD-HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPE-ILQEMLYGPAV 205
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D W++G +L E+L G F E+ D L E I
Sbjct: 206 DWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 122/290 (42%), Gaps = 75/290 (25%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 145
RV+G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 146 -VHYSRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIG 179
V A Q +Y+ L Y +I AL ++H G
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK-G 141
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV-KGEPNISYICSRYYRAPELIFGATEYT 238
+ +RD+KP+N+++N H VKL DFG K + G ++ + Y APE++ + +
Sbjct: 142 IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILM-RSGHN 199
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
AVD WS+G ++ ++L G P F GE+ + +I+K K P Y
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---------KLNLPPY------- 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
+ EA DL+ +LL+ + R A E HPFF
Sbjct: 244 -------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE
Sbjct: 144 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVL 201
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 202 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 241
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 242 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 291
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQELKGASKELLSKL 381
FF P ARLP PP F+ P L ++++ L+ L
Sbjct: 292 DEFFTSGYIP-ARLPITCLTIPPRFSIAPSSLDPSNRKPLTVL 333
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE
Sbjct: 142 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVL 199
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 200 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 239
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 240 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 289
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQELKGASKELLSKL 381
FF P ARLP PP F+ P L ++++ L+ L
Sbjct: 290 DEFFTSGYIP-ARLPITCLTIPPRFSIAPSSLDPSNRKPLTVL 331
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 60/292 (20%)
Query: 84 NGQPKQTIS--YMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMR 139
+G + +S + E +G+G+ IV++ K T + A+K K DK+ E+ +
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 140 LLDHPNVHYSRASQRMPL---IYVKLYT-----------------------YQICRALAY 173
L HPN+ + P + ++L T QI A+AY
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 174 IHGGIGVCHRDIKPQNLL-VNPHTHQ-VKLCDFGSAKVLVKGEPNISYICSR-YYRAPEL 230
+H G+ HRD+KP+NLL P +K+ DFG +K+ V+ + + +C Y APE+
Sbjct: 164 LHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTVCGTPGYCAPEI 221
Query: 231 IFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 290
+ G Y VD+WSVG + LL G F E G DQ + R + C
Sbjct: 222 LRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM---------FRRILNC---- 266
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
E+ F PW + A DLV +L+ P R T +A HP+
Sbjct: 267 --EYYF----ISPW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 96 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 154
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 155 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 63/285 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------ELQTMRLLDHPN 145
Y + +G G++G V K TG AIK + + E+ ++ LDHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 146 V-----------HYSRA---------------SQRMPLIYVKLYTYQICRALAYIHGGIG 179
+ +Y Q+ + + Q+ Y+H
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH-N 124
Query: 180 VCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+KP+NLL+ + +K+ DFG + G + + YY APE++ +Y
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL--RKKY 182
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS G +L LL G P F G++ DQ ++L + + P++T+
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEKGKFSFDPPDWTQ---- 231
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ EA LV +L Y P+ R +A EA HP+
Sbjct: 232 --------------VSDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 96 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 154
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 155 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 133/310 (42%), Gaps = 88/310 (28%)
Query: 94 MAERVVGQGSFG-IVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLL----DHPNV-- 146
++E+++G GS G +VFQ G VA+K++L D + + L ++LL DHPNV
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 147 -HYSRASQRMPLIYVKLYTY-----------------------------QICRALAYIHG 176
+ S + R I ++L QI +A++H
Sbjct: 74 YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 177 GIGVCHRDIKPQNLLVNPHTH------------QVKLCDFGSAKVLVKGEPNISYIC--- 221
+ + HRD+KPQN+LV+ + ++ + DFG K L G+
Sbjct: 134 -LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 222 --SRYYRAPELIFGATEYTT------AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
+ +RAPEL+ + T ++DI+S+GCV +L + P + II
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNII 251
Query: 274 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+ G + +E+KC++ + + EA DL+S+++ + P R T
Sbjct: 252 R--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRPT 289
Query: 334 ALEACIHPFF 343
A++ HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 64/272 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 129
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAV 241
IKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + V
Sbjct: 130 IKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 301
D+WS G VL +L G+ P + D E Y+++K +
Sbjct: 189 DVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYL 227
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 228 NPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 32/183 (17%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 226
+ A++++H + HRD+KP+N+L++ + Q++L DFG + L GE + Y
Sbjct: 209 LLEAVSFLHAN-NIVHRDLKPENILLDDNM-QIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 227 APELIFGATE-----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTR 281
APE++ + + Y VD+W+ G +L LL G P F + L I
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI--------- 317
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHP 341
M Y +F P+ W DL+SRLLQ P R TA +A HP
Sbjct: 318 -----MEGQY-QFSSPE-----WDD-----RSSTVKDLISRLLQVDPEARLTAEQALQHP 361
Query: 342 FFD 344
FF+
Sbjct: 362 FFE 364
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 37/205 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V + TG VA+ K+L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAV-KILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 145 NV--HYSRASQ----RMPLIYV---KLYTY-----------------QICRALAYIHGGI 178
++ Y S M + YV +L+ Y QI A+ Y H +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
V HRD+KP+N+L++ H K+ DFG + ++ GE + S Y APE+I G
Sbjct: 132 -VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAG 189
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGE 263
VDIWS G +L LL G F E
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 96 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 154
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 155 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 96 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 154
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N S++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 155 LIDSMAN-SFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 119/290 (41%), Gaps = 75/290 (25%)
Query: 97 RVVGQGSFGIVFQAKCL---ETGETVAIK--------KVLQDKRYKNRELQTMRLLDHPN 145
RV+G+G +G VFQ + + TG+ A+K + +D + E + + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 146 -VHYSRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIG 179
V A Q +Y+ L Y +I AL ++H G
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK-G 141
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-YRAPELIFGATEYT 238
+ +RD+KP+N+++N H VKL DFG K + C Y APE++ + +
Sbjct: 142 IIYRDLKPENIMLN-HQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILM-RSGHN 199
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
AVD WS+G ++ ++L G P F GE+ + +I+K K P Y
Sbjct: 200 RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---------KLNLPPY------- 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
+ EA DL+ +LL+ + R A E HPFF
Sbjct: 244 -------------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 51/249 (20%)
Query: 68 NGTETGHIIVTTIGGRNGQPK-QTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQ 126
+G +TG++ TIGG+ Q + + + E +G G+ G V++ + +TG +A+K++
Sbjct: 6 SGKQTGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM-- 58
Query: 127 DKRYKNRELQTMRLLDHPNVHYS-------------------------------RASQRM 155
+R N+E L+D V S + +RM
Sbjct: 59 -RRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRM 117
Query: 156 ----PLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLV 211
P + T I +AL Y+ GV HRD+KP N+L++ Q+KLCDFG + LV
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG-QIKLCDFGISGRLV 176
Query: 212 KGEPNISYICSRYYRAPELIF----GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
+ Y APE I +Y D+WS+G L EL GQ FP ++
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKT 234
Query: 268 QLVEIIKVL 276
+ KVL
Sbjct: 235 DFEVLTKVL 243
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 67/281 (23%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR-------LLDHPNV---- 146
++G+GSF V++A+ + TG VAIK + + YK +Q ++ L HP++
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 147 HYSRASQRMPLI-----------YVK------------LYTYQICRALAYIHGGIGVCHR 183
+Y S + L+ Y+K + +QI + Y+H G+ HR
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH-GILHR 136
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVL-VKGEPNISYICSRYYRAPELIFGATEYTTAVD 242
D+ NLL+ + +K+ DFG A L + E + + + Y +PE I + + D
Sbjct: 137 DLTLSNLLLTRNM-NIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSAHGLESD 194
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS+GC+ LL+G+P F ++ + L +++ +++ P
Sbjct: 195 VWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-----------------LADYEMPSF--- 234
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ EA DL+ +LL+ +P R + HPF
Sbjct: 235 ---------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 37/205 (18%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDHP 144
Y+ +G G+FG V + TG VA+ K+L ++ ++ RE+Q ++L HP
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAV-KILNRQKIRSLDVVGKIKREIQNLKLFRHP 71
Query: 145 NV--HYSRASQ----RMPLIYV---KLYTY-----------------QICRALAYIHGGI 178
++ Y S M + YV +L+ Y QI A+ Y H +
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
V HRD+KP+N+L++ H K+ DFG + ++ GE S Y APE+I G
Sbjct: 132 -VVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAG 189
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGE 263
VDIWS G +L LL G F E
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 122/305 (40%), Gaps = 64/305 (20%)
Query: 74 HIIVTTIGGRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV----LQDKR 129
H IVT + G + ++G G FG V + + TG +A K + ++DK
Sbjct: 75 HRIVT---AKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKE 131
Query: 130 YKNRELQTMRLLDHPNV------HYSRASQRMPLIYVK---------------------L 162
E+ M LDH N+ S+ + + YV L
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL 191
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLL-VNPHTHQVKLCDFGSAKVLVKGEPNISYIC 221
+ QIC + ++H + + H D+KP+N+L VN Q+K+ DFG A+ E
Sbjct: 192 FMKQICEGIRHMHQ-MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG 250
Query: 222 SRYYRAPELI-FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPT 280
+ + APE++ + + T D+WSVG + LL G F G++ + L I+
Sbjct: 251 TPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE 308
Query: 281 REEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIH 340
EE + + EA + +S+LL + R +A EA H
Sbjct: 309 DEEF-------------------------QDISEEAKEFISKLLIKEKSWRISASEALKH 343
Query: 341 PFFDE 345
P+ +
Sbjct: 344 PWLSD 348
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 38/216 (17%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRLLDHPN- 145
Y+ + +G+GSFG K E G IK++ +++ RE+ + + HPN
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 146 VHYSRASQRMPLIYVKL---------------------------YTYQICRALAYIHGGI 178
V Y + + +Y+ + + QIC AL ++H
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR- 144
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELIFGATEY 237
+ HRDIK QN+ + V+L DFG A+VL E + I + YY +PE I Y
Sbjct: 145 KILHRDIKSQNIFLTKDG-TVQLGDFGIARVLNSTVELARACIGTPYYLSPE-ICENKPY 202
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
DIW++GCVL EL + F S + +++II
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 64/272 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 130
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAV 241
IKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + V
Sbjct: 131 IKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 301
D+WS G VL +L G+ P + D E Y+++K +
Sbjct: 190 DVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYL 228
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 229 NPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 118/295 (40%), Gaps = 63/295 (21%)
Query: 84 NGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM----- 138
N K + +Y + +G+G+F +V + TG A K++ K+ R+ Q +
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREAR 80
Query: 139 --RLLDHPNV---HYSRASQRMPLIYVKLYT-----------------------YQICRA 170
R L HPN+ H S + + L T QI +
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAP 228
+AY H G+ HR++KP+NLL+ VKL DFG A + E + + Y +P
Sbjct: 141 IAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 288
E + Y+ VDIW+ G +L LL+G P F E +L IK
Sbjct: 200 E-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA------------- 244
Query: 289 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 245 ---GAYDYP---SPEWDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 132 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 191 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 230 PWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 132 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 191 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 230 PWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 132 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 191 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 230 PWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 64/272 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 128
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAV 241
IKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + V
Sbjct: 129 IKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 301
D+WS G VL +L G+ P + D E Y+++K +
Sbjct: 188 DVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYL 226
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 227 NPWKKI-----DSAPLALLHKILVENPSARIT 253
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 64/272 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 130
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAV 241
IKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + V
Sbjct: 131 IKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 301
D+WS G VL +L G+ P + D E Y+++K +
Sbjct: 190 DVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYL 228
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 229 NPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 67/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL------QDKRYKNRELQTMRLLDHP-NVHYSRA 151
+G+G++G+V + + + +G+ A+K++ + KR + R +D P V + A
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 152 SQRMPLIYV----------KLY------------------TYQICRALAYIHGGIGVCHR 183
R +++ K Y I +AL ++H + V HR
Sbjct: 102 LFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 161
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-EPNISYICSRYYRAPELI---FGATEYTT 239
D+KP N+L+N QVK CDFG + LV +I C + Y APE I Y+
Sbjct: 162 DVKPSNVLINA-LGQVKXCDFGISGYLVDDVAKDIDAGC-KPYXAPERINPELNQKGYSV 219
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
DIWS+G EL + + FP +S GTP ++ Q+
Sbjct: 220 KSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------------LKQV 253
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
P ++ + E VD S+ L+ + R T E HPFF
Sbjct: 254 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 64/296 (21%)
Query: 77 VTTIGGRNGQPKQTISYMAERV-----VGQGSFGIVFQAKCLETGETVAIKKVLQ--DKR 129
+ + G P+Q + AE + +G+G++G V + +G+ +A+K++ D++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK 62
Query: 130 YKNRELQ----TMRLLDHPN-VHYSRASQR----------MPLIYVKLYTY--------- 165
+ + L MR D P V + A R M + K Y Y
Sbjct: 63 EQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVI 122
Query: 166 ----------QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP 215
+AL ++ + + HRDIKP N+L++ + +KLCDFG + LV
Sbjct: 123 PEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIA 181
Query: 216 NISYICSRYYRAPELIFGATE---YTTAVDIWSVGCVLAELLLGQPLFPGESGV-DQLVE 271
R Y APE I + Y D+WS+G L EL G+ +P + V DQL +
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ 241
Query: 272 IIKVLGTP---TREEIKCMNPNYTEF-------------KFPQIKAHPWHKIFHKR 311
++K G P + E + +P++ F K+ ++ HP+ ++ +R
Sbjct: 242 VVK--GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 119/272 (43%), Gaps = 64/272 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 129
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAV 241
IKP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + V
Sbjct: 130 IKPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 242 DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKA 301
D+WS G VL +L G+ P + D E Y+++K +
Sbjct: 189 DVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYL 227
Query: 302 HPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 228 NPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM------------- 138
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 -----------------------RLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYI 174
L++ ++HY + + ++ Y +I L ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
H V +RD+KP N+L++ H H V++ D G A K +P+ S + + Y APE++
Sbjct: 309 HNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-------------- 275
Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 276 ---LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 314
L + C+ E K P ++ W +F ++ PP
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 120/287 (41%), Gaps = 61/287 (21%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDH 143
QP++ + + +G+GS+G V++A ETG+ VAIK+V + + +E+ M+ D
Sbjct: 26 QPEEVFDVLEK--LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS 83
Query: 144 PNV-----------------HYSRASQRMPLIYVKLYTY----------QICRALAYIHG 176
P+V Y A +I ++ T + L Y+H
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 177 GIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS-YICSRYYRAPELIFGAT 235
+ HRDIK N+L+N H KL DFG A L + I + ++ APE+I
Sbjct: 144 -MRKIHRDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-QEI 200
Query: 236 EYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFK 295
Y DIWS+G E+ G+P + + + + PT NP T F+
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPPYA------DIHPMRAIFMIPT-------NPPPT-FR 246
Query: 296 FPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
P++ W F D V + L SP R TA + HPF
Sbjct: 247 KPEL----WSDNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM------------- 138
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 139 -----------------------RLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYI 174
L++ ++HY + + ++ Y +I L ++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
H V +RD+KP N+L++ H H V++ D G A K +P+ S + + Y APE++
Sbjct: 308 HNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 364
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-------------- 275
Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 424
Query: 276 ---LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 314
L + C+ E K P ++ W +F ++ PP
Sbjct: 425 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 467
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 102/244 (41%), Gaps = 60/244 (24%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK----------V 209
V+ Y + +AL IH G+ HRD+KP N L N + L DFG A+
Sbjct: 119 VREYMLNLFKALKRIHQ-FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 210 LVKGEP-------NISYIC-SRY-----------YRAPELIFGATEYTTAVDIWSVGCVL 250
V+ E N IC SR +RAPE++ TTA+D+WS G +
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 251 AELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIK-----------------------C 286
LL G+ P + + L +I+ + G +RE I+ C
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLC 295
Query: 287 MNPNYTEFKFPQ----IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ P+ I+ H + +P EA DL+ +LL +P R TA EA +HPF
Sbjct: 296 ERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPF 355
Query: 343 FDEL 346
F ++
Sbjct: 356 FKDM 359
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 116/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 132 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 191 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 230 PWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM------------- 138
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 -----------------------RLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYI 174
L++ ++HY + + ++ Y +I L ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
H V +RD+KP N+L++ H H V++ D G A K +P+ S + + Y APE++
Sbjct: 309 HNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-------------- 275
Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 276 ---LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 314
L + C+ E K P ++ W +F ++ PP
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM------------- 138
+ R++G+G FG V+ + +TG+ A+K L KR K ++ +T+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 139 -----------------------RLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYI 174
L++ ++HY + + ++ Y +I L ++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
H V +RD+KP N+L++ H H V++ D G A K +P+ S + + Y APE++
Sbjct: 309 HNRF-VVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKG 365
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLF-----PGESGVDQLVEIIKV-------------- 275
Y ++ D +S+GC+L +LL G F + +D++ + V
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
Query: 276 ---LGTPTREEIKCMNPNYTEFK-FPQIKAHPWHKIFHKRMPP 314
L + C+ E K P ++ W +F ++ PP
Sbjct: 426 EGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKRYK-NRELQTMRLLDHPNV- 146
Y V+G G+F V A+ T + VAIK K L+ K E+ + + HPN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 147 ----------HYSRASQRMP-------LIYVKLYT--------YQICRALAYIHGGIGVC 181
H Q + ++ YT +Q+ A+ Y+H +G+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD-LGIV 138
Query: 182 HRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
HRD+KP+NLL ++ + DFG +K+ G + + Y APE + Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSK 197
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
AVD WS+G + LL G P F E+ +I+K EF P
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA---------------EYEFDSPY- 241
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W I A D + L++ P R T +A HP+
Sbjct: 242 ----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 68/274 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 130
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPELIFGATEYTT 239
IKP+NLL++ + +K+ DFG A V N + ++ Y APEL+ +
Sbjct: 131 IKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
VD+WS G VL +L G+ P + D E Y+++K +
Sbjct: 188 PVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKT 226
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 227 YLNPWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--------RELQTMRLLDH 143
+Y + +G+G+F V A+ + TG+ VA+K + DK N RE++ ++L+H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 144 PNV--------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGG 177
PN+ Y A R + QI A+ Y H
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQK 132
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
+ HRD+K +NLL++ + +K+ DFG + G ++ + Y APEL G
Sbjct: 133 F-IVHRDLKAENLLLDADXN-IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGES 264
VD+WS+G +L L+ G F G++
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 150 RASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKV 209
+ + R+P + + + + L Y+ + HRD+KP N+LVN ++KLCDFG +
Sbjct: 99 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG-EIKLCDFGVSGQ 157
Query: 210 LVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
L+ N ++ +R Y +PE + G T Y+ DIWS+G L E+ +G+
Sbjct: 158 LIDEMAN-EFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ +L+H NV
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 131
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 132 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 191 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 230 PWKKI-----DSAPLALLHKILVENPSARIT 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 68/274 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 129
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPELIFGATEYTT 239
IKP+NLL++ + +K+ DFG A V N + ++ Y APEL+ +
Sbjct: 130 IKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
VD+WS G VL +L G+ P + D E Y+++K +
Sbjct: 187 PVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKT 225
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 226 YLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 84/190 (44%), Gaps = 34/190 (17%)
Query: 164 TYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 220
T +I RAL + + + HRD+KP+N+L++ + +KL DFG + L GE S
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLRSVC 184
Query: 221 CSRYYRAPELIFGATE-----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 275
+ Y APE+I + Y VD+WS G ++ LL G P F + L I
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI--- 241
Query: 276 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTAL 335
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 242 -----------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTAE 279
Query: 336 EACIHPFFDE 345
EA HPFF +
Sbjct: 280 EALAHPFFQQ 289
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 70/286 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK--------------------KVLQDKRY------ 130
+++G+G+FG V K TG A+K +VLQ+ R+
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 131 ------KNRELQTMRLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYIHGGIGVCHR 183
+R M + + + + +R+ + Y +I AL Y+H V +R
Sbjct: 217 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 276
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K +NL+++ H +K+ DFG K +K + C Y APE + +Y AVD
Sbjct: 277 DLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDNDYGRAVD 334
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
W +G V+ E++ G+ F + ++L E+I + E +FP+
Sbjct: 335 WWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM----------------EEIRFPRT--- 374
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
+ PEA L+S LL+ P R A E H FF
Sbjct: 375 ---------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 123/294 (41%), Gaps = 74/294 (25%)
Query: 90 TISYMAERVVGQGSFGIV-----------FQAKCLETGETVAIKKVLQDKRYKNRELQTM 138
T Y +G+G+F +V + AK + T + A +D + RE +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RDHQKLEREARIC 84
Query: 139 RLLDHPNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALA 172
RLL HPN+ H S + + + L T +QI ++
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPN--ISYICSRYYRAP 228
+IH + HRD+KP+NLL+ VKL DFG A + V+GE + + Y +P
Sbjct: 145 HIHQH-DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSP 202
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMN 288
E + Y VDIW+ G +L LL+G P F E +L + IK
Sbjct: 203 E-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA------------- 247
Query: 289 PNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ FP + W + PEA +L++++L +P R TA +A HP+
Sbjct: 248 ---GAYDFP---SPEWDTV-----TPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 62/297 (20%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN----RELQTM-RLLDHPNV-- 146
+ ++G+G++ V A L+ G+ A+K + + + RE++T+ + + N+
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 147 --HYSRASQRMPLIYVKL----------------------YTYQICRALAYIHGGIGVCH 182
+ R L++ KL + AL ++H G+ H
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK-GIAH 134
Query: 183 RDIKPQNLLVNP--HTHQVKLCDF--GSAKVLVKG-----EPNISYIC-SRYYRAPELI- 231
RD+KP+N+L VK+CDF GS L P ++ C S Y APE++
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 232 ---FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVD---QLVEIIKVLGTPTREEIK 285
AT Y D+WS+G VL +L G P F G G D E+ +V E I+
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 254
Query: 286 CMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+++FP W I EA DL+S+LL R +A + HP+
Sbjct: 255 -----EGKYEFPD---KDWAHI-----SSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 117/286 (40%), Gaps = 70/286 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK--------------------KVLQDKRY------ 130
+++G+G+FG V K TG A+K +VLQ+ R+
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 131 ------KNRELQTMRLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYIHGGIGVCHR 183
+R M + + + + +R+ + Y +I AL Y+H V +R
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K +NL+++ H +K+ DFG K +K + C Y APE + +Y AVD
Sbjct: 274 DLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE-VLEDNDYGRAVD 331
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
W +G V+ E++ G+ F + ++L E+I + E +FP+
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM----------------EEIRFPRT--- 371
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
+ PEA L+S LL+ P R A E H FF
Sbjct: 372 ---------LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 70/286 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK--------------------KVLQDKRY------ 130
+++G+G+FG V K TG A+K +VLQ+ R+
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 131 ------KNRELQTMRLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYIHGGIGVCHR 183
+R M + + + + +R+ + Y +I AL Y+H V +R
Sbjct: 76 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 135
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K +NL+++ H +K+ DFG K +K + C Y APE + +Y AVD
Sbjct: 136 DLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDNDYGRAVD 193
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------------- 229
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
F + + PEA L+S LL+ P R A E H FF
Sbjct: 230 -----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 70/286 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK--------------------KVLQDKRY------ 130
+++G+G+FG V K TG A+K +VLQ+ R+
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 131 ------KNRELQTMRLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYIHGGIGVCHR 183
+R M + + + + +R+ + Y +I AL Y+H V +R
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K +NL+++ H +K+ DFG K +K + C Y APE + +Y AVD
Sbjct: 135 DLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDNDYGRAVD 192
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------------- 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
F + + PEA L+S LL+ P R A E H FF
Sbjct: 229 -----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 62/271 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G+ G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKG--EPNISYICSRY-YRAPELIFGATEYTTAVD 242
KP+NLL++ + +K+ DFG A V E ++ +C Y APEL+ + VD
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
+WS G VL +L G+ P + D E Y+++K + +
Sbjct: 190 VWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTYLN 228
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
PW KI + L+ ++L +P+ R T
Sbjct: 229 PWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 89/210 (42%), Gaps = 35/210 (16%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNISY 219
+ Y QI Y+H V HRD+K NL +N +VK+ DFG A KV GE
Sbjct: 118 RYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDL-EVKIGDFGLATKVEYDGERKKVL 175
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ Y APE + ++ VD+WS+GC++ LL+G+P F
Sbjct: 176 CGTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF------------------- 215
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
E C+ Y +IK + + K + P A L+ ++LQ P R T E
Sbjct: 216 ---ETSCLKETYL-----RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLN 265
Query: 340 HPFFDELRDPNARLP-NGRPFPPLFNFKPQ 368
FF P ARLP PP F+ P
Sbjct: 266 DEFFTSGYIP-ARLPITCLTIPPRFSIAPS 294
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 118/286 (41%), Gaps = 70/286 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK--------------------KVLQDKRY------ 130
+++G+G+FG V K TG A+K +VLQ+ R+
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 131 ------KNRELQTMRLLDHPNVHYSRASQRM-PLIYVKLYTYQICRALAYIHGGIGVCHR 183
+R M + + + + +R+ + Y +I AL Y+H V +R
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K +NL+++ H +K+ DFG K +K + C Y APE + +Y AVD
Sbjct: 134 DLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE-VLEDNDYGRAVD 191
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAH 302
W +G V+ E++ G+ F + ++L E+I + EEI+
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR----------------- 227
Query: 303 PWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFF 343
F + + PEA L+S LL+ P R A E H FF
Sbjct: 228 -----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 134/333 (40%), Gaps = 88/333 (26%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLD 142
+++ R +G G+FG V + ++ + A+K V K+Y +++Q + +
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 143 HPNVHYS---RASQRMPLIY-----------------------VKLYTYQICRALAYIHG 176
+ V Y M LI+ +KLY +I +AL Y+
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155
Query: 177 GIGVCHRDIKPQNLLVN-PHTHQ-----------------------VKLCDFGSAKVLVK 212
+ + H D+KP+N+L++ P+ + +KL DFG A K
Sbjct: 156 -MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--K 212
Query: 213 GEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEI 272
+ + S I +R YRAPE+I + + D+WS GCVLAEL G LF ++ L +
Sbjct: 213 SDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271
Query: 273 IKVL----------GTPTREEIKCMNPNYTEFKFPQ-----------IKAHPWHKIFHKR 311
++ T T K +N + + +P+ K P +KI
Sbjct: 272 ESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHE 330
Query: 312 MPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
+ D + +LQ P LR + E H F +
Sbjct: 331 L---FCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLA 207
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 208 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLA 207
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 208 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 51/229 (22%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVH--YSRASQRMP--------LIYVKLYTYQ--------------- 166
RE Q L+HP + Y P + YV T +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 167 -----ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---- 217
C+AL + H G+ HRD+KP N+L++ T+ VK+ DFG A+ + ++
Sbjct: 120 EVIADACQALNFSHQN-GIIHRDVKPANILISA-TNAVKVVDFGIARAIADSGNSVXQTA 177
Query: 218 SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
+ I + Y +PE G + D++S+GCVL E+L G+P F G+S V
Sbjct: 178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 68/274 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 129
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPELIFGATEYTT 239
IKP+NLL++ + +K+ DFG A V N + ++ Y APEL+ +
Sbjct: 130 IKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
VD+WS G VL +L G+ P + D E Y+++K +
Sbjct: 187 PVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE-------------------YSDWKEKKT 225
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 226 YLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K +E L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ------ 136
P Q +++ + R +G GSFG V K ETG A+K + + K K ++++
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 137 --------------TMRLLDHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
D+ N++ + R R + + Y QI
Sbjct: 94 RIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +K+ DFG AK VKG +C Y AP
Sbjct: 154 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGR--TWXLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLA 207
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 208 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 68/274 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN------RELQTMRLLDHPNVHYSR 150
+ +G+G++G V A T E VA+K ++ KR + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 151 ASQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRD 184
+R MP + + +Q+ + Y+HG IG+ HRD
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRD 129
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPELIFGATEYTT 239
IKP+NLL++ + +K+ DFG A V N + ++ Y APEL+ +
Sbjct: 130 IKPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
VD+WS G VL +L G+ P + D E Y+++K +
Sbjct: 187 PVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKT 225
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 226 YLNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 62/223 (27%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR----ELQTMRLLD-HPNV----- 146
RV+ +G F V++A+ + +G A+K++L ++ KNR E+ M+ L HPN+
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 147 -----------------------------HYSRASQRMPL---IYVKLYTYQICRALAYI 174
+ R PL +K++ YQ CRA+ ++
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF-YQTCRAVQHM 152
Query: 175 HGGIG-VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR---------- 223
H + HRD+K +NLL++ + +KLCDFGSA + P+ S+ R
Sbjct: 153 HRQKPPIIHRDLKVENLLLS-NQGTIKLCDFGSATT-ISHYPDYSWSAQRRALVEEEITR 210
Query: 224 ----YYRAPELIFGATEYTTA--VDIWSVGCVLAELLLGQPLF 260
YR PE+I + + DIW++GC+L L Q F
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
Y++Q+ R + ++ + HRD+ +N+L++ + VK+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLSSRKCI-HRDLAARNILLS-ENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGT 278
R + APE IF Y+T D+WS G +L E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
RE ++ P Y+ + QI WH+ +R P +LV +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 117/290 (40%), Gaps = 63/290 (21%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 141 LDHPNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYI 174
L HPN+ H S + + L T QI ++AY
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 175 HGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 232
H G+ HR++KP+NLL+ VKL DFG A + E + + Y +PE +
Sbjct: 122 HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VL 179
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 292
Y+ VDIW+ G +L LL+G P F E +L IK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA----------------G 222
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 223 AYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 128/303 (42%), Gaps = 70/303 (23%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYKNRELQTMRLLDHP 144
Y +G G F V A + TGE VAIK + DK R K E++ ++ L H
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK--IMDKNTLGSDLPRIKT-EIEALKNLRHQ 68
Query: 145 NV----HYSRASQR--MPLIYV---KLYTY-----------------QICRALAYIHGGI 178
++ H + + M L Y +L+ Y QI A+AY+H
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ- 127
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYIC-SRYYRAPELIFGATE 236
G HRD+KP+NLL + + H++KL DFG AK + ++ C S Y APELI G +
Sbjct: 128 GYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSY 186
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
+ D+WS+G +L L+ G P + D ++ + K K M Y K+
Sbjct: 187 LGSEADVWSMGILLYVLMCG--FLPFDD--DNVMALYK----------KIMRGKYDVPKW 232
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNG 356
+ P ++ L+ ++LQ P R + HP+ + + +
Sbjct: 233 ---------------LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSK 277
Query: 357 RPF 359
PF
Sbjct: 278 NPF 280
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 66/273 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-----NRELQTMRLLDHPNVHYSRA 151
+ +G+G++G V A T E VA+K V + +E+ ++L+H NV
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 152 SQR--------------------------MPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+R MP + + +Q+ + Y+HG IG+ HRDI
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG-IGITHRDI 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY-----YRAPELIFGATEYTTA 240
KP+NLL++ + +K+ DFG A V N + ++ Y APEL+ +
Sbjct: 131 KPENLLLDERDN-LKISDFGLATVFRYN--NRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK 300
VD+WS G VL +L G+ P + D E Y+++K +
Sbjct: 188 VDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------------YSDWKEKKTY 226
Query: 301 AHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCT 333
+PW KI + L+ ++L +P+ R T
Sbjct: 227 LNPWKKI-----DSAPLALLHKILVENPSARIT 254
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG + + Y AP
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 207
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 208 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 60/283 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNV- 146
Y V+G G+F V A+ T + VAIK + ++ + E+ + + HPN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 147 ----------HYSRASQRMP-------LIYVKLYT--------YQICRALAYIHGGIGVC 181
H Q + ++ YT +Q+ A+ Y+H +G+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD-LGIV 138
Query: 182 HRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
HRD+KP+NLL ++ + DFG +K+ G + + Y APE + Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSK 197
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
AVD WS+G + LL G P F E+ +I+K E++F
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILK-----------------AEYEF--- 237
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ W I A D + L++ P R T +A HP+
Sbjct: 238 DSPYWDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKR-YKNRELQTMRLLDHPNV- 146
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 147 ----------HYSRASQRMP-------LIYVKLYT--------YQICRALAYIHGGIGVC 181
H Q + ++ YT +Q+ A+ Y+H +G+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD-LGIV 138
Query: 182 HRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
HRD+KP+NLL ++ + DFG +K+ G + + Y APE + Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSK 197
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
AVD WS+G + LL G P F E+ +I+K EF P
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA---------------EYEFDSPY- 241
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W I A D + L++ P R T +A HP+
Sbjct: 242 ----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 164 TYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 220
T +I RAL + + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVC 171
Query: 221 CSRYYRAPELIFGATE-----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 275
+ Y APE+I + Y VD+WS G ++ LL G P F + L I
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI--- 228
Query: 276 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTAL 335
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 229 -----------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTAE 266
Query: 336 EACIHPFFDE 345
EA HPFF +
Sbjct: 267 EALAHPFFQQ 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 113/283 (39%), Gaps = 60/283 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK----KVLQDKR-YKNRELQTMRLLDHPNV- 146
Y V+G G+F V A+ T + VAIK + L+ K E+ + + HPN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 147 ----------HYSRASQRMP-------LIYVKLYT--------YQICRALAYIHGGIGVC 181
H Q + ++ YT +Q+ A+ Y+H +G+
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD-LGIV 138
Query: 182 HRDIKPQNLLVNP--HTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
HRD+KP+NLL ++ + DFG +K+ G + + Y APE + Y+
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLAQKPYSK 197
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
AVD WS+G + LL G P F E+ +I+K EF P
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA---------------EYEFDSPY- 241
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
W I A D + L++ P R T +A HP+
Sbjct: 242 ----WDDI-----SDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 51/229 (22%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVHYSRASQRM-----PLIYVKL------------------------ 162
RE Q L+HP + A+ PL Y+ +
Sbjct: 61 -REAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 163 -YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS--- 218
C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + +++
Sbjct: 120 EVIADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 219 -YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
I + Y +PE G + D++S+GCVL E+L G+P F G+S V
Sbjct: 178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 117/290 (40%), Gaps = 63/290 (21%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 61
Query: 141 LDHPNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYI 174
L HPN+ H S + + L T QI ++AY
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 175 HGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 232
H G+ HR++KP+NLL+ VKL DFG A + E + + Y +PE +
Sbjct: 122 HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VL 179
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 292
Y+ VDIW+ G +L LL+G P F E +L IK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA----------------G 222
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 223 AYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 51/229 (22%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVH--YSRASQRMP--------LIYVKLYTYQ--------------- 166
RE Q L+HP + Y P + YV T +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 167 -----ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS--- 218
C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + +++
Sbjct: 120 EVIADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 219 -YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
I + Y +PE G + D++S+GCVL E+L G+P F G+S V
Sbjct: 178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 117/290 (40%), Gaps = 63/290 (21%)
Query: 88 KQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-------RL 140
K + +Y + +G+G+F +V + TG A K++ K+ R+ Q + R
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFA-AKIINTKKLSARDFQKLEREARICRK 60
Query: 141 LDHPNV---HYSRASQRMPLIYVKLYT-----------------------YQICRALAYI 174
L HPN+ H S + + L T QI ++AY
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 175 HGGIGVCHRDIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF 232
H G+ HR++KP+NLL+ VKL DFG A + E + + Y +PE +
Sbjct: 121 HSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE-VL 178
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 292
Y+ VDIW+ G +L LL+G P F E +L IK
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKA----------------G 221
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ +P + W + PEA L+ +L +P R TA +A P+
Sbjct: 222 AYDYPSPE---WDTV-----TPEAKSLIDSMLTVNPKKRITADQALKVPW 263
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 33 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 93 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV 152
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 153 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 207
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 208 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 164 TYQICRALAYIHGGI---GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 220
T +I RAL + + + HRD+KP+N+L++ + +KL DFG + L GE
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN-IKLTDFGFSCQLDPGEKLREVC 184
Query: 221 CSRYYRAPELIFGATE-----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 275
+ Y APE+I + Y VD+WS G ++ LL G P F + L I
Sbjct: 185 GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI--- 241
Query: 276 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTAL 335
M+ NY +F P+ + DLVSR L P R TA
Sbjct: 242 -----------MSGNY-QFGSPEWDDY----------SDTVKDLVSRFLVVQPQKRYTAE 279
Query: 336 EACIHPFFDE 345
EA HPFF +
Sbjct: 280 EALAHPFFQQ 289
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 42/212 (19%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 18 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 77
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 78 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 137
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG + + Y AP
Sbjct: 138 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWTLCGTPEYLAP 193
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 194 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPN-VHYSRASQRMPLIYVKL--------------------YTYQICR----ALAYIH 175
+PN V+Y + ++V + +CR AL ++H
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGA 234
V HRDIK N+L+ VKL DFG A++ + + + + Y+ APE++
Sbjct: 134 SN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 191
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
Y VDIWS+G + E++ G+P + E+ + L +I GTP + + ++ + +F
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDF 249
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K +ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NL+++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLMIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 51/227 (22%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVH--YSRASQRMP--------LIYVKLYTYQ--------------- 166
RE Q L+HP + Y P + YV T +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 167 -----ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS--- 218
C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + +++
Sbjct: 120 EVIADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 219 -YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
I + Y +PE G + D++S+GCVL E+L G+P F G+S
Sbjct: 178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 66/279 (23%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ ++ VA+K + + + K RE++ L HPN+
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 147 ---HYSRASQRMPLIYV---KLY-----------------TYQICRALAYIHGGIGVCHR 183
Y R + L Y +LY ++ AL Y HG V HR
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK-KVIHR 147
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ ++K+ DFG + V + + Y PE+I G + VD+
Sbjct: 148 DIKPENLLLGLKG-ELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEGRM-HNEKVDL 204
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
W +G + ELL+G P F S + I+KV + KFP
Sbjct: 205 WCIGVLCYELLVGNPPFESASHNETYRRIVKV-----------------DLKFP------ 241
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+P A DL+S+LL+++P+ R + HP+
Sbjct: 242 ------ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 38/199 (19%)
Query: 97 RVVGQGSFGIVFQAK--------CLETGETVAIKKVLQDKRYKNRELQTMRLLDHP---N 145
+V+G+GSFG V A+ ++ + AI K ++K + ++ + HP
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 146 VHYS-RASQRMPLIY----------------------VKLYTYQICRALAYIHGGIGVCH 182
+H+S + + ++ + + Y +I AL Y+H + + +
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS-LNIVY 162
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTAV 241
RD+KP+N+L++ H V L DFG K ++ S C + Y APE + Y V
Sbjct: 163 RDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLHKQPYDRTV 220
Query: 242 DIWSVGCVLAELLLGQPLF 260
D W +G VL E+L G P F
Sbjct: 221 DWWCLGAVLYEMLYGLPPF 239
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 47/201 (23%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYS------- 149
++G G FG VF+AK G+T IK+V + RE++ + LDH N VHY+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 150 ------------------------------------RASQRMPLIYVKLYTYQICRALAY 173
R +++ + QI + + Y
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDY 137
Query: 174 IHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 233
IH + +RD+KP N+ + T QVK+ DFG L + Y +PE I
Sbjct: 138 IHSK-KLINRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQI-S 194
Query: 234 ATEYTTAVDIWSVGCVLAELL 254
+ +Y VD++++G +LAELL
Sbjct: 195 SQDYGKEVDLYALGLILAELL 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 51/229 (22%)
Query: 85 GQPKQTISYMAER-----VVGQGSFGIVFQAKCLETGETVAIKKVLQDK--------RYK 131
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 132 NRELQTMRLLDHPNVH--YSRASQRMP--------LIYVKLYTYQ--------------- 166
RE Q L+HP + Y P + YV T +
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI 119
Query: 167 -----ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS--- 218
C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + +++
Sbjct: 120 EVIADACQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 219 -YICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
I + Y +PE G + D++S+GCVL E+L G+P F G+S V
Sbjct: 178 AVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 36/240 (15%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPN-VHYSRASQRMPLIYVKL--------------------YTYQICR----ALAYIH 175
+PN V+Y + ++V + +CR AL ++H
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGA 234
V HRDIK N+L+ VKL DFG A++ + + + Y+ APE++
Sbjct: 134 SN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK 191
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
Y VDIWS+G + E++ G+P + E+ + L +I GTP + + ++ + +F
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDF 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 36/240 (15%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 141 LDHPN-VHYSRASQRMPLIYVKL--------------------YTYQICR----ALAYIH 175
+PN V+Y + ++V + +CR AL ++H
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGA 234
V HRDIK N+L+ VKL DFG A++ + + + Y+ APE++
Sbjct: 135 SN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 192
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
Y VDIWS+G + E++ G+P + E+ + L +I GTP + + ++ + +F
Sbjct: 193 A-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDF 250
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NL+++ + +K+ DFG AK VKG +C Y AP
Sbjct: 154 TFEYLHS-LDLIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGR--TWXLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 36/240 (15%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 141 LDHPN-VHYSRASQRMPLIYVKL--------------------YTYQICR----ALAYIH 175
+PN V+Y + ++V + +CR AL ++H
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGA 234
V HRDIK N+L+ VKL DFG A++ + + + Y+ APE++
Sbjct: 134 SN-QVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK 191
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
Y VDIWS+G + E++ G+P + E+ + L +I GTP + + ++ + +F
Sbjct: 192 A-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDF 249
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 61/103 (59%), Gaps = 7/103 (6%)
Query: 168 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS----YICSR 223
C+AL + H G+ HRD+KP N++++ T+ VK+ DFG A+ + +++ I +
Sbjct: 143 CQALNFSHQN-GIIHRDVKPANIMISA-TNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
Y +PE G + D++S+GCVL E+L G+P F G+S V
Sbjct: 201 QYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 44/213 (20%)
Query: 86 QPKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQT 137
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 32 NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 138 MRLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQIC 168
R+L D+ N++ + R R + + Y QI
Sbjct: 92 KRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV 151
Query: 169 RALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRA 227
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y A
Sbjct: 152 LTFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLA 206
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
PE+I + Y AVD W++G ++ E+ G P F
Sbjct: 207 PEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 174 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 228
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 229 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 154 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 154 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 154 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 208
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 209 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 73/322 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAI--------------------KKVL 125
QP ++ RV+G+G FG V + TG+ A K++L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 126 Q--DKRY----------KNRELQTMRLLDHPNVH---YSRASQRMPLIYVKLYTYQICRA 170
+ + R+ K+ + L++ ++ Y P Y +IC
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + + Y APE+
Sbjct: 299 LEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 231 IFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 290
+ YT + D W++GC+L E++ GQ F Q + IK REE++ +
Sbjct: 357 V-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL--- 400
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFFDE 345
+K P + + +R P+A L S+LL P R +A E HP F +
Sbjct: 401 --------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
Query: 346 LRDPNARLPNGRPFPPLFNFKP 367
L RL G PP FKP
Sbjct: 451 LN--FKRLGAGMLEPP---FKP 467
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 146 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 200
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 201 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 114/294 (38%), Gaps = 64/294 (21%)
Query: 99 VGQGSFGIVFQAKCLE--TGETVAIKKVLQ----DKRYKNRELQTMRLLDHP---NVH-- 147
+G G+FG+V +C+E TG K + DK E+ M L HP N+H
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 148 -------------------YSRASQ---RMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
+ R + +M V Y Q C L ++H + H DI
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDI 175
Query: 186 KPQNLLV-NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIW 244
KP+N++ VK+ DFG A L E + + APE++ D+W
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DREPVGFYTDMW 234
Query: 245 SVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPW 304
++G + LL G F GE ++ L + +K + + E F +
Sbjct: 235 AIGVLGYVLLSGLSPFAGEDDLETL------------QNVKRCDWEFDEDAFSSVS---- 278
Query: 305 HKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD-ELRDPNARLPNGR 357
PEA D + LLQ P R T +A HP+ + + +R+P+ R
Sbjct: 279 ---------PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSR 323
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 127/317 (40%), Gaps = 60/317 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + VCHRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLEN 145
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+CDFG +K V S + + Y APE++ D+WS G
Sbjct: 146 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E + I ++L ++ P+Y
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--------------- 244
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKP 367
+ PE L+SR+ P R + E H +F L++ A L N F+
Sbjct: 245 ---HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFDESD 299
Query: 368 QELKGASKELLSKLIPE 384
Q G S E + ++I E
Sbjct: 300 Q--PGQSIEEIMQIIAE 314
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 136/322 (42%), Gaps = 73/322 (22%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAI--------------------KKVL 125
QP ++ RV+G+G FG V + TG+ A K++L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 126 Q--DKRY----------KNRELQTMRLLDHPNVH---YSRASQRMPLIYVKLYTYQICRA 170
+ + R+ K+ + L++ ++ Y P Y +IC
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
L +H + +RD+KP+N+L++ H H +++ D G A + +G+ + + Y APE+
Sbjct: 299 LEDLHRE-RIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV 356
Query: 231 IFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPN 290
+ YT + D W++GC+L E++ GQ F Q + IK REE++ +
Sbjct: 357 V-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEVERL--- 400
Query: 291 YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC-----TALEACIHPFFDE 345
+K P + + +R P+A L S+LL P R +A E HP F +
Sbjct: 401 --------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
Query: 346 LRDPNARLPNGRPFPPLFNFKP 367
L RL G PP FKP
Sbjct: 451 LN--FKRLGAGMLEPP---FKP 467
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 36/240 (15%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKN---RELQTMRL 140
G PK+ Y +GQG+ G V+ A + TG+ VAI+++ LQ + K E+ MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 141 LDHPN-VHYSRASQRMPLIYVKL--------------------YTYQICR----ALAYIH 175
+PN V+Y + ++V + +CR AL ++H
Sbjct: 75 NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 176 GGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPELIFGA 234
V HR+IK N+L+ VKL DFG A++ + + + + Y+ APE++
Sbjct: 135 SN-QVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK 192
Query: 235 TEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
Y VDIWS+G + E++ G+P + E+ + L +I GTP + + ++ + +F
Sbjct: 193 A-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDF 250
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 11/109 (10%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNIS---- 218
+T QI + + H + + HRDIKPQN+L++ + +K+ DFG AK L E +++
Sbjct: 116 FTNQILDGIKHAHD-MRIVHRDIKPQNILIDSNK-TLKIFDFGIAKAL--SETSLTQTNH 171
Query: 219 YICSRYYRAPELIFG-ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
+ + Y +PE G AT+ T DI+S+G VL E+L+G+P F GE+ V
Sbjct: 172 VLGTVQYFSPEQAKGEATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 176 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 234
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 235 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 287
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 288 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 170 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 229 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 281
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 282 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 44/212 (20%)
Query: 87 PKQTISYMAE----RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTM 138
P Q +++ + + +G GSFG V K ETG A+K + + K K ++ L
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 139 RLL----------------DHPNVH-------------YSRASQRMPLIYVKLYTYQICR 169
R+L D+ N++ + R R + + Y QI
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 170 ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAP 228
Y+H + + +RD+KP+NLL++ + +++ DFG AK VKG +C Y AP
Sbjct: 146 TFEYLHS-LDLIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAP 200
Query: 229 ELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
E+I + Y AVD W++G ++ E+ G P F
Sbjct: 201 EIIL-SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 237
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 238 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 132 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 190
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 191 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 243
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 244 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 140 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 198
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 199 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 251
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 252 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 124 VLQDKRYKNRELQTMRLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
QD +Y ++ M D N+ ++ +P + K YT ++ AL IH +G+ HR
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVVLALDAIHS-MGLIHR 198
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGEPNI-SYICSRYYRAPELI---FGATEYT 238
D+KP N+L++ H H +KL DFG+ K+ G + + + + Y +PE++ G Y
Sbjct: 199 DVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYG 257
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D WSVG L E+L+G F +S V +I+
Sbjct: 258 RECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 131 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 189
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 190 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 242
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 243 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 74/301 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN+
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 147 -HYSRASQRMPL---------IYVKL-------------YTYQICRALAYIHGGIGVCHR 183
+Y +R+ L +Y +L + ++ AL Y H V HR
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-KVIHR 139
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ + ++K+ DFG + V + Y PE+I G T + VD+
Sbjct: 140 DIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDL 196
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
W G + E L+G P F S + I+ V + KFP
Sbjct: 197 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF---- 235
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLF 363
+ + DL+S+LL+Y P R HP+ N+R R PP++
Sbjct: 236 --------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPPVY 279
Query: 364 N 364
Sbjct: 280 Q 280
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 74/301 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN+
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 147 -HYSRASQRMPL---------IYVKL-------------YTYQICRALAYIHGGIGVCHR 183
+Y +R+ L +Y +L + ++ AL Y H V HR
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-KVIHR 138
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ + ++K+ DFG + V + Y PE+I G T + VD+
Sbjct: 139 DIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDL 195
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
W G + E L+G P F S + I+ V + KFP
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF---- 234
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLF 363
+ + DL+S+LL+Y P R HP+ N+R R PP++
Sbjct: 235 --------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPPVY 278
Query: 364 N 364
Sbjct: 279 Q 279
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 130 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 188
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 189 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 241
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 242 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 184
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 185 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 237
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 238 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 122/301 (40%), Gaps = 74/301 (24%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK-------NRELQTMRLLDHPNV--- 146
R +G+G FG V+ A+ + +A+K + + + K RE++ L HPN+
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 147 -HYSRASQRMPL---------IYVKL-------------YTYQICRALAYIHGGIGVCHR 183
+Y +R+ L +Y +L + ++ AL Y H V HR
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-KVIHR 138
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
DIKP+NLL+ + ++K+ DFG + V + Y PE+I G T + VD+
Sbjct: 139 DIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKT-HDEKVDL 195
Query: 244 WSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHP 303
W G + E L+G P F S + I+ V + KFP
Sbjct: 196 WCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DLKFPPF---- 234
Query: 304 WHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLF 363
+ + DL+S+LL+Y P R HP+ N+R R PP++
Sbjct: 235 --------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR----RVLPPVY 278
Query: 364 N 364
Sbjct: 279 Q 279
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 126/317 (39%), Gaps = 60/317 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + VCHRD+K +N
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLEN 144
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+CDFG +K V S + + Y APE++ D+WS G
Sbjct: 145 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E + I ++L ++ P+Y
Sbjct: 205 TLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--------------- 243
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKP 367
+ PE L+SR+ P R + E H +F L++ A L N F
Sbjct: 244 ---HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFAASD 298
Query: 368 QELKGASKELLSKLIPE 384
Q G S E + ++I E
Sbjct: 299 Q--PGQSIEEIMQIIAE 313
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 125 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 183
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 184 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 236
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 237 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 124 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 182
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 235
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 236 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 136/340 (40%), Gaps = 76/340 (22%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNV-H 147
T Y + +G GS+ + + T A+K + + KR E++ + R HPN+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 148 YSRASQRMPLIYV-----------------KLYT--------YQICRALAYIHGGIGVCH 182
+YV K ++ + I + + Y+H GV H
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-GVVH 139
Query: 183 RDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATE 236
RD+KP N+L NP + +++CDFG AK L + C + + APE +
Sbjct: 140 RDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLERQG 196
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
Y A DIWS+G +L +L G F D EI+ +G+ KF
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSG---------------KF 240
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF---FDELRDPNARL 353
+ W+ + A DLVS++L P+ R TA HP+ +D+L P +L
Sbjct: 241 -SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQL--PQYQL 292
Query: 354 PNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCPFL 393
N + P L +KGA S L R Q P L
Sbjct: 293 -NRQDAPHL-------VKGAMAATYSAL----NRNQSPVL 320
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 46/213 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQD------KRYKN--RELQTMRLLDHPNV- 146
E ++G G FG V++A + G+ VA+K D + +N +E + +L HPN+
Sbjct: 12 EEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 147 ----------------HYSR--------ASQRMPLIYVKLYTYQICRALAYIH--GGIGV 180
++R + +R+P + + QI R + Y+H + +
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 181 CHRDIKPQNLLV-------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFG 233
HRD+K N+L+ + +K+ DFG A+ + +S + + APE+I
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGAYAWMAPEVI-R 187
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGV 266
A+ ++ D+WS G +L ELL G+ F G G+
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 61/274 (22%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLD-HPNV--- 146
+ ++ +G+GSF I KC+ A + KR + +E+ ++L + HPN+
Sbjct: 14 LKDKPLGEGSFSIC--RKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKL 71
Query: 147 HYSRASQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHR 183
H Q + ++L ++ A++++H +GV HR
Sbjct: 72 HEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD-VGVVHR 130
Query: 184 DIKPQNLLVNPHTH--QVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTA 240
D+KP+NLL ++K+ DFG A++ + C + +Y APEL+ Y +
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDES 189
Query: 241 VDIWSVGCVLAELLLGQPLFPGES---GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFP 297
D+WS+G +L +L GQ F VEI+K + +F F
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK-------------GDFSF- 235
Query: 298 QIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 331
+ W K + EA DL+ LL PN R
Sbjct: 236 --EGEAW-----KNVSQEAKDLIQGLLTVDPNKR 262
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 216
+ AL ++H G+ HRD+KP+N+L H +QV K+CDFG + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 217 ISYIC-SRYYRAPELIFGATE----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVE 271
+ C S Y APE++ +E Y D+WS+G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 272 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 331
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 332 CTALEACIHPF 342
+A + HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 25/179 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + Y
Sbjct: 124 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY 182
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 183 YVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 235
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 236 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 38/197 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 186
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP+NLL++ + +++ DFG AK VKG + + Y APE+I + Y AVD
Sbjct: 187 DLKPENLLIDQQGY-IQVTDFGFAK-RVKG-ATWTLCGTPEYLAPEIIL-SKGYNKAVDW 242
Query: 244 WSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 243 WALGVLIYEMAAGYPPF 259
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 49/203 (24%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNV----HYS 149
V+G+G FG + ETGE + +K+++ + +R +E++ MR L+HPNV
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 150 RASQRMPLI--YVK---------------------LYTYQICRALAYIHGGIGVCHRDIK 186
+R+ I Y+K + I +AY+H + + HRD+
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH-SMNIIHRDLN 135
Query: 187 PQNLLVNPHTHQVKLCDFGSAKVLV--KGEP-------------NISYICSRYYRAPELI 231
N LV + + V + DFG A+++V K +P + + + Y+ APE+I
Sbjct: 136 SHNCLVRENKNVV-VADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194
Query: 232 FGATEYTTAVDIWSVGCVLAELL 254
G + Y VD++S G VL E++
Sbjct: 195 NGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 88/216 (40%), Gaps = 54/216 (25%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVL----QDKRYKNRELQTMRLLDHPNV-- 146
Y+ + +G+G F V + L G A+K++L QD+ RE RL +HPN+
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 147 --------HYSRASQRMPLIYVKLYTYQ------------------------ICRALAYI 174
++ + L + K T ICR L I
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGS---AKVLVKGEPNISYI-------CSRY 224
H G HRD+KP N+L+ V L D GS A + V+G + C+
Sbjct: 151 HAK-GYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 225 YRAPELIFGATEYTTA---VDIWSVGCVLAELLLGQ 257
YRAPEL F + D+WS+GCVL ++ G+
Sbjct: 209 YRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 108 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 166
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 167 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 221
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 222 WWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLAGTPEYLAPEIIL-SKGYNKAVDW 221
Query: 244 WSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 61/284 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNV----- 146
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 147 ------HYSRASQRM-------PLIYVKLYT--------YQICRALAYIHGGIGVCHRDI 185
H ++ M ++ K ++ + I + + Y+H GV HRD+
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ-GVVHRDL 147
Query: 186 KPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTT 239
KP N+L NP +++CDFG AK L + C + + APE + Y
Sbjct: 148 KPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLKRQGYDE 204
Query: 240 AVDIWSVGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
DIWS+G +L +L G P G S D EI+ +G+ KF
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG---------------KFT- 246
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
+ W+ + A DLVS++L P+ R TA + HP+
Sbjct: 247 LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 94 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 152
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 153 DLKPENLLIDEQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 207
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 208 WWALGVLIYEMAAGYPPF 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 120/287 (41%), Gaps = 61/287 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNV----- 146
Y+ + +G GS+ + T A+K + + KR + E++ + R HPN+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 147 ------HYSRASQRM-------PLIYVKLYT--------YQICRALAYIHGGIGVCHRDI 185
H ++ M ++ K ++ + I + + Y+H GV HRD+
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ-GVVHRDL 147
Query: 186 KPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTT 239
KP N+L NP +++CDFG AK L + C + + APE + Y
Sbjct: 148 KPSNILYVDESGNPEC--LRICDFGFAKQLRAENGLLMTPCYTANFVAPE-VLKRQGYDE 204
Query: 240 AVDIWSVGCVLAELLLG-QPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
DIWS+G +L +L G P G S D EI+ +G+ KF
Sbjct: 205 GCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSG---------------KF-T 246
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDE 345
+ W+ + A DLVS++L P+ R TA + HP+ +
Sbjct: 247 LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDI 243
D+KP+NLL++ + +++ DFG AK VKG + Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGR-TWXLXGTPEYLAPEIIL-SKGYNKAVDW 221
Query: 244 WSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 222 WALGVLIYEMAAGYPPF 238
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 128 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-LDLIYR 186
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 187 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGR--TWXLCGTPEYLAPEIIL-SKGYNKAVD 241
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 242 WWALGVLIYEMAAGYPPF 259
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 131/323 (40%), Gaps = 79/323 (24%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNV-- 146
V+G+G+F +V + ETG+ A+K V K + RE +L HP++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 147 -HYSRASQRMPLIYVKL---------------------------YTYQICRALAYIHGGI 178
+ +S M + + Y QI AL Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 179 GVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFG 233
+ HRD+KP+N+L+ ++ VKL DFG A L GE + + + ++ APE++
Sbjct: 150 NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGTPHFMAPEVV-K 206
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VD+W G +L LL G F G ++L E I + + K MNP
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKYK-MNPR--- 254
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA-- 351
W I A DLV R+L P R T EA HP+ E RD A
Sbjct: 255 ---------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYK 299
Query: 352 -RLPNGRPFPPLFNFKPQELKGA 373
LP FN + ++LKGA
Sbjct: 300 IHLPETVEQLRKFNAR-RKLKGA 321
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 134/340 (39%), Gaps = 76/340 (22%)
Query: 90 TISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTM-RLLDHPNV-H 147
T Y + +G GS+ + + T A+K + + KR E++ + R HPN+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 148 YSRASQRMPLIYV-----------------KLYT--------YQICRALAYIHGGIGVCH 182
+YV K ++ + I + + Y+H GV H
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-GVVH 139
Query: 183 RDIKPQNLLV-----NPHTHQVKLCDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATE 236
RD+KP N+L NP + +++CDFG AK L + C + + APE +
Sbjct: 140 RDLKPSNILYVDESGNPES--IRICDFGFAKQLRAENGLLXTPCYTANFVAPE-VLERQG 196
Query: 237 YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKF 296
Y A DIWS+G +L L G F D EI+ +G+ KF
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPD-DTPEEILARIGSG---------------KF 240
Query: 297 PQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF---FDELRDPNARL 353
+ W+ + A DLVS+ L P+ R TA HP+ +D+L P +L
Sbjct: 241 -SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQL--PQYQL 292
Query: 354 PNGRPFPPLFNFKPQELKGASKELLSKLIPEHARKQCPFL 393
N + P L +KGA S L R Q P L
Sbjct: 293 -NRQDAPHL-------VKGAXAATYSAL----NRNQSPVL 320
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 102 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-LDLIYR 160
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 161 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 215
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 216 WWALGVLIYEMAAGYPPF 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-------TMRLLDHP----NV 146
V+G+GSFG V A T E AIK + +D ++ +++ + LLD P +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 147 HYS-RASQRMPLI--YVK--------------------LYTYQICRALAYIHGGIGVCHR 183
H + R+ + YV Y +I L ++H G+ +R
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKR-GIIYR 144
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKV-LVKGEPNISYICSRYYRAPELIFGATEYTTAVD 242
D+K N++++ H +K+ DFG K ++ G + + Y APE+I Y +VD
Sbjct: 145 DLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-AYQPYGKSVD 202
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
W+ G +L E+L GQP F GE D+L + I
Sbjct: 203 WWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 74/130 (56%), Gaps = 12/130 (9%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK 212
+++P + + Y+ +I AL Y+H G+ +RD+K N+L++ H +KL D+G K ++
Sbjct: 148 RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLR 205
Query: 213 -GEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF--------PGE 263
G+ ++ + Y APE++ G +Y +VD W++G ++ E++ G+ F P +
Sbjct: 206 PGDTTSTFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
Query: 264 SGVDQLVEII 273
+ D L ++I
Sbjct: 265 NTEDYLFQVI 274
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 42/213 (19%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E ++
Sbjct: 5 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 61
Query: 138 MRLLDHPNV------HYSRASQRMPLIY---------------------VKLYTYQICRA 170
+ DHP + +Y + + + +++ Q+ A
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 121
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPE 229
L ++H + HRD+K N+L+ ++L DFG SAK L + S+I + Y+ APE
Sbjct: 122 LNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 179
Query: 230 LIF----GATEYTTAVDIWSVGCVLAELLLGQP 258
++ T Y DIWS+G L E+ +P
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+P+ +K + + +YIH +CHRD+KP N+L++ + +VKL DFG ++ +V +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG-RVKLSDFGESEYMVDKK 206
Query: 215 PNISYICSRYYRAPELIFGATEYTTA-VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
S + + PE + Y A VDIWS+G L + F + LVE+
Sbjct: 207 IKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS---LVELF 262
Query: 274 KVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKR-------MPPEAVDLVSRLLQY 326
+ T E +P + H + + +K+ + E +D + L+
Sbjct: 263 NNIRTKNIE-------------YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK 309
Query: 327 SPNLRCTALEACIHPFF-----DELRDPNARLPNGR 357
+P R T+ +A H + ++LR+ + L R
Sbjct: 310 NPAERITSEDALKHEWLADTNIEDLREFSKELYKKR 345
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 42/213 (19%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P + + E +G G+FG V++AK ETG +A KV++ K + E ++
Sbjct: 13 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 69
Query: 138 MRLLDHPNV------HYSRASQRMPLIY---------------------VKLYTYQICRA 170
+ DHP + +Y + + + +++ Q+ A
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPE 229
L ++H + HRD+K N+L+ ++L DFG SAK L + S+I + Y+ APE
Sbjct: 130 LNFLHSK-RIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPE 187
Query: 230 LIF----GATEYTTAVDIWSVGCVLAELLLGQP 258
++ T Y DIWS+G L E+ +P
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 112 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKX 169
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 170 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 224
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 225 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 259
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 260 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 289
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 106/276 (38%), Gaps = 56/276 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + T E VA+K + + RE+ R L HPN+
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + +CHRD+K +N
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH-SMQICHRDLKLEN 146
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+CDFG +K V S + + Y APE++ D+WS G
Sbjct: 147 TLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E D I ++L ++ P
Sbjct: 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILS--------------VKYSIPD--------- 243
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
R+ PE L+SR+ P R + E H +F
Sbjct: 244 -DIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 119 VAIKKVLQDKRYKNRELQTMRLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
V + QD RY ++ M D N+ ++ +P + + YT ++ AL IH +
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHS-M 192
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISYICSRYYRAP 228
G HRD+KP N+L++ H +KL DFG+ + K G P+ Y +P
Sbjct: 193 GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--------YISP 243
Query: 229 ELI---FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
E++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 119 VAIKKVLQDKRYKNRELQTMRLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
V + QD RY ++ M D N+ ++ +P + + YT ++ AL IH +
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHS-M 187
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISYICSRYYRAP 228
G HRD+KP N+L++ H +KL DFG+ + K G P+ Y +P
Sbjct: 188 GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--------YISP 238
Query: 229 ELI---FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
E++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 76/181 (41%), Gaps = 25/181 (13%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK + + Y
Sbjct: 170 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY 228
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
Y APE + G +Y + D WS+G + LL G P F G + G TR
Sbjct: 229 YVAPE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHG------LAISPGXKTR--- 278
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFD 344
+ EF P+ W ++ E L+ LL+ P R T E HP+
Sbjct: 279 --IRXGQYEFPNPE-----WSEV-----SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIX 326
Query: 345 E 345
+
Sbjct: 327 Q 327
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKX 164
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 165 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 219
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 220 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 255 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK 212
+++P + + Y+ +I AL Y+H G+ +RD+K N+L++ H +KL D+G K ++
Sbjct: 116 RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLR 173
Query: 213 GEPNISYICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF--------PGE 263
S C Y APE++ G +Y +VD W++G ++ E++ G+ F P +
Sbjct: 174 PGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
Query: 264 SGVDQLVEII 273
+ D L ++I
Sbjct: 233 NTEDYLFQVI 242
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 119 VAIKKVLQDKRYKNRELQTMRLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
V + QD RY ++ M D N+ ++ +P + + YT ++ AL IH +
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDAIHS-M 192
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK----------GEPNISYICSRYYRAP 228
G HRD+KP N+L++ H +KL DFG+ + K G P+ Y +P
Sbjct: 193 GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNKEGMVRCDTAVGTPD--------YISP 243
Query: 229 ELI---FGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
E++ G Y D WSVG L E+L+G F +S V +I+
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NL+++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLIIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIII-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKX 164
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 165 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 219
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 220 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 255 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 43/214 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 220
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 108 RFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTF 165
Query: 221 CSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 166 CGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM---- 219
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CTA 334
EEI+ F + + PEA L++ LL+ P R A
Sbjct: 220 --EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255
Query: 335 LEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
E H FF + + + + PP FKPQ
Sbjct: 256 KEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ ++ G P F
Sbjct: 221 WWALGVLIYQMAAGYPPF 238
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK 212
+++P + + Y+ +I AL Y+H G+ +RD+K N+L++ H +KL D+G K ++
Sbjct: 101 RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLR 158
Query: 213 GEPNISYICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF--------PGE 263
S C Y APE++ G +Y +VD W++G ++ E++ G+ F P +
Sbjct: 159 PGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
Query: 264 SGVDQLVEII 273
+ D L ++I
Sbjct: 218 NTEDYLFQVI 227
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 110 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKT 167
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 168 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 222
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 223 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 257
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 258 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 287
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKX 164
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 165 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 219
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 220 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 255 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 71/130 (54%), Gaps = 12/130 (9%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK 212
+++P + + Y+ +I AL Y+H G+ +RD+K N+L++ H +KL D+G K ++
Sbjct: 105 RKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLR 162
Query: 213 GEPNISYICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF--------PGE 263
S C Y APE++ G +Y +VD W++G ++ E++ G+ F P +
Sbjct: 163 PGDTTSXFCGTPNYIAPEILRGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
Query: 264 SGVDQLVEII 273
+ D L ++I
Sbjct: 222 NTEDYLFQVI 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV--HYSRA 151
+G+GSFG VF+ T + VAIK + + +E+ + D P V +Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 152 SQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIKPQ 188
+ L + Y +I + L Y+H + HRDIK
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAA 153
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ H +VKL DFG A L + +++ + ++ APE+I + Y + DIWS+G
Sbjct: 154 NVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLG 211
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 212 ITAIELARGEP 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNV------- 146
E VVG+G+FG+V +AK + VAIK++ + K EL+ + ++HPN+
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 147 ---------------HYSRASQRMPLIYVKL-----YTYQICRALAYIHG--GIGVCHRD 184
Y+ PL Y + Q + +AY+H + HRD
Sbjct: 72 LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIW 244
+KP NLL+ +K+CDFG+A + N S + APE +F + Y+ D++
Sbjct: 132 LKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNYSEKCDVF 188
Query: 245 SVGCVLAELL 254
S G +L E++
Sbjct: 189 SWGIILWEVI 198
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV--HYSRA 151
+G+GSFG VF+ T + VAIK + + +E+ + D P V +Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 152 SQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIKPQ 188
+ L + Y +I + L Y+H + HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAA 133
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ H +VKL DFG A L + +++ + ++ APE+I + Y + DIWS+G
Sbjct: 134 NVLLSEHG-EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSAYDSKADIWSLG 191
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 192 ITAIELARGEP 202
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 126/317 (39%), Gaps = 60/317 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + VCHRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLEN 145
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+C FG +K V S + + Y APE++ D+WS G
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E + I ++L ++ P+Y
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--------------- 244
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKP 367
+ PE L+SR+ P R + E H +F L++ A L N F+
Sbjct: 245 ---HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFDESD 299
Query: 368 QELKGASKELLSKLIPE 384
Q G S E + ++I E
Sbjct: 300 Q--PGQSIEEIMQIIAE 314
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 94/215 (43%), Gaps = 43/215 (20%)
Query: 160 VKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ Y +I AL Y+H V +RDIK +NL+++ H +K+ DFG K + +
Sbjct: 107 ARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKT 164
Query: 220 ICSR-YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGT 278
C Y APE + +Y AVD W +G V+ E++ G+ F + ++L E+I +
Sbjct: 165 FCGTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM--- 219
Query: 279 PTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR-----CT 333
EEI+ F + + PEA L++ LL+ P R
Sbjct: 220 ---EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSD 254
Query: 334 ALEACIHPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
A E H FF + + + + PP FKPQ
Sbjct: 255 AKEVMEHRFFLSINWQD--VVQKKLLPP---FKPQ 284
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 46/222 (20%)
Query: 85 GQPKQTIS---YMAERVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE---- 134
G P+ I+ + R++G+G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 135 -LQTMRLLDHPNV-------------------------HY-SRASQRMPLIYVKLYTYQI 167
M+ LDHP++ HY R + ++ + LY+ QI
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 134
Query: 168 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--- 224
C+A+AY+ I HRDI +N+LV VKL DFG ++ ++ E +R
Sbjct: 135 CKAMAYLE-SINCVHRDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIK 191
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL--GQPLFPGES 264
+ +PE I +TTA D+W + E+L QP F E+
Sbjct: 192 WMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN--RELQTMRLLDHPNV------- 146
E VVG+G+FG+V +AK + VAIK++ + K EL+ + ++HPN+
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 147 ---------------HYSRASQRMPLIYVKL-----YTYQICRALAYIHGG--IGVCHRD 184
Y+ PL Y + Q + +AY+H + HRD
Sbjct: 71 LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 185 IKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIW 244
+KP NLL+ +K+CDFG+A + N S + APE +F + Y+ D++
Sbjct: 131 LKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSNYSEKCDVF 187
Query: 245 SVGCVLAELL 254
S G +L E++
Sbjct: 188 SWGIILWEVI 197
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 43/207 (20%)
Query: 97 RVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNV-- 146
R++G+G FG V++ GE VA+K +D N+E M+ LDHP++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 147 -----------------------HY-SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
HY R + ++ + LY+ QIC+A+AY+ I H
Sbjct: 74 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE-SINCVH 132
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTT 239
RDI +N+LV VKL DFG ++ ++ E +R + +PE I +TT
Sbjct: 133 RDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI-NFRRFTT 189
Query: 240 AVDIWSVGCVLAELLL--GQPLFPGES 264
A D+W + E+L QP F E+
Sbjct: 190 ASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV--HYSRA 151
+G+GSFG VF+ T + VAIK + + +E+ + D P V +Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 152 SQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIKPQ 188
+ L + Y +I + L Y+H + HRDIK
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAA 148
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ H +VKL DFG A L + ++ + ++ APE+I + Y + DIWS+G
Sbjct: 149 NVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIWSLG 206
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 207 ITAIELARGEP 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 43/207 (20%)
Query: 97 RVVGQGSFGIVFQAKCLE-TGE--TVAIKKVLQDKRYKNRE-----LQTMRLLDHPNV-- 146
R++G+G FG V++ GE VA+K +D N+E M+ LDHP++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 147 -----------------------HY-SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
HY R + ++ + LY+ QIC+A+AY+ I H
Sbjct: 78 LIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE-SINCVH 136
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTT 239
RDI +N+LV VKL DFG ++ ++ E +R + +PE I +TT
Sbjct: 137 RDIAVRNILV-ASPECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPESI-NFRRFTT 193
Query: 240 AVDIWSVGCVLAELLL--GQPLFPGES 264
A D+W + E+L QP F E+
Sbjct: 194 ASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV--HYSRA 151
+G+GSFG VF+ T + VAIK + + +E+ + D P V +Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 152 SQRMPLIYVKLYT-----------------------YQICRALAYIHGGIGVCHRDIKPQ 188
+ L + Y +I + L Y+H + HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI-HRDIKAA 133
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ H +VKL DFG A L + ++ + ++ APE+I + Y + DIWS+G
Sbjct: 134 NVLLSEHG-EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDSKADIWSLG 191
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 192 ITAIELARGEP 202
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQV---KLCDFG-SAKVLVKGE------PN 216
+ AL ++H G+ HRD+KP+N+L H +QV K+CDF + + + G+ P
Sbjct: 120 VASALDFLHNK-GIAHRDLKPENILCE-HPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 217 ISYIC-SRYYRAPELIFGATE----YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVE 271
+ C S Y APE++ +E Y D+WS+G +L LL G P F G G D +
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237
Query: 272 IIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLR 331
+ P + + + +++FP W I A DL+S+LL R
Sbjct: 238 --RGEACPACQNMLFESIQEGKYEFPD---KDWAHI-----SCAAKDLISKLLVRDAKQR 287
Query: 332 CTALEACIHPF 342
+A + HP+
Sbjct: 288 LSAAQVLQHPW 298
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C Y AP +I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPAIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 66/243 (27%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVHY--------- 148
V+GQG+FG V +A+ AIKK+ + + L + LL N Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 149 SRASQRMPLIYVK----------------LYTY------------------QICRALAYI 174
R + P+ VK LY QI AL+YI
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI--------SY 219
H G+ HRD+KP N+ ++ + VK+ DFG AK +L N+ S
Sbjct: 133 HSQ-GIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
I + Y A E++ G Y +D++S+G + E+ ++P +G+++ V I+K L +
Sbjct: 191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNILKKLRSV 244
Query: 280 TRE 282
+ E
Sbjct: 245 SIE 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 102/243 (41%), Gaps = 66/243 (27%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVHY--------- 148
V+GQG+FG V +A+ AIKK+ + + L + LL N Y
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 149 SRASQRMPLIYVK----------------LYTY------------------QICRALAYI 174
R + P+ VK LY QI AL+YI
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 175 HGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEPNI--------SY 219
H G+ HRD+KP N+ ++ + VK+ DFG AK +L N+ S
Sbjct: 133 HSQ-GIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
I + Y A E++ G Y +D++S+G + E+ ++P +G+++ V I+K L +
Sbjct: 191 IGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM-----IYPFSTGMER-VNILKKLRSV 244
Query: 280 TRE 282
+ E
Sbjct: 245 SIE 247
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 125/317 (39%), Gaps = 60/317 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + ++ E VA+K + + ++ RE+ R L HPN+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + VCHRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCH-AMQVCHRDLKLEN 145
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+C FG +K V + + Y APE++ D+WS G
Sbjct: 146 TLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E + I ++L ++ P+Y
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--------------- 244
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKP 367
+ PE L+SR+ P R + E H +F L++ A L N F+
Sbjct: 245 ---HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFDESD 299
Query: 368 QELKGASKELLSKLIPE 384
Q G S E + ++I E
Sbjct: 300 Q--PGQSIEEIMQIIAE 314
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ + HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 40/198 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE----LQTMRLL----------- 141
+ +G GSFG V K E+G A+K + + K K ++ L R+L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 142 -----DHPNVH-------------YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
D+ N++ + R R + + Y QI Y+H + + +R
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS-LDLIYR 165
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+KP+NLL++ + +++ DFG AK VKG +C APE+I + Y AVD
Sbjct: 166 DLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEALAPEIIL-SKGYNKAVD 220
Query: 243 IWSVGCVLAELLLGQPLF 260
W++G ++ E+ G P F
Sbjct: 221 WWALGVLIYEMAAGYPPF 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 88/221 (39%), Gaps = 45/221 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNV--HYSRASQRMPLIYVKLYTY------------------------------QIC 168
L HPN+ +Y R R + Y Q+
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 169 RALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYICSR 223
AL H GG V HRD+KP N+ ++ VKL DFG A++L E ++ +
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEFVGTP 180
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 181 YYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 148 YSRASQRMPLIYVKLYTYQICR----ALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKL 201
+SR +R + + +I R A+ ++H + HRD+KP+NLL +KL
Sbjct: 114 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKL 172
Query: 202 CDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
DFG AK + + C + YY APE + G +Y + D+WS+G ++ LL G P F
Sbjct: 173 TDFGFAKETTQNA--LQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
Query: 261 PGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLV 320
+G + + + I+ ++ FP + W ++ +A L+
Sbjct: 230 YSNTG--------QAISPGMKRRIRL-----GQYGFPNPE---WSEV-----SEDAKQLI 268
Query: 321 SRLLQYSPNLRCTALEACIHPFFDE 345
LL+ P R T + HP+ ++
Sbjct: 269 RLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 197 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 254
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 255 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 306
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 307 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 195 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 252
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 253 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 304
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 305 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 148 YSRASQRMPLIYVKLYTYQICR----ALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKL 201
+SR +R + + +I R A+ ++H + HRD+KP+NLL +KL
Sbjct: 95 FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKL 153
Query: 202 CDFGSAKVLVKGEPNISYIC-SRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
DFG AK + + C + YY APE + G +Y + D+WS+G ++ LL G P F
Sbjct: 154 TDFGFAKETTQNA--LQTPCYTPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
Query: 261 PGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLV 320
+G + + + I+ ++ FP + W ++ +A L+
Sbjct: 211 YSNTG--------QAISPGMKRRIRL-----GQYGFPNPE---WSEV-----SEDAKQLI 249
Query: 321 SRLLQYSPNLRCTALEACIHPFFDE 345
LL+ P R T + HP+ ++
Sbjct: 250 RLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 193
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 193
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIXKDP 202
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 190 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 247
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 248 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 299
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 202
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 188 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 245
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 246 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 297
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 298 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ + HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXI-HRDLAARNILLS-EKNVVKICDFGLARDIYKDP 198
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 250
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 251 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 147 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 204
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 256
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 257 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 193
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 202
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 60/317 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYK---NRELQTMRLLDHPNV--------- 146
+G G+FG+ + + E VA+K + + ++ RE+ R L HPN+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 147 --------HYSRASQ---------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN 189
Y+ + R + + Q+ ++Y H + V HRD+K +N
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAH-AMQVAHRDLKLEN 145
Query: 190 LLVNPH-THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGC 248
L++ ++K+ DFG +K V S + + Y APE++ D+WS G
Sbjct: 146 TLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 249 VLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKI 307
L +L+G P E + I ++L ++ P+Y
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILN------VQYAIPDYV--------------- 244
Query: 308 FHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPFPPLFNFKP 367
+ PE L+SR+ P R + E H +F L++ A L N F+
Sbjct: 245 ---HISPECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNTMTTQFDESD 299
Query: 368 QELKGASKELLSKLIPE 384
Q G S E + ++I E
Sbjct: 300 Q--PGQSIEEIMQIIAE 314
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 182 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 239
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 240 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 291
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 292 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 148 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 205
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 265
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+CDFG A+ + K
Sbjct: 136 LTLEHLICYSFQVAKGMEFL-ASRKCIHRDLAARNILLS-EKNVVKICDFGLARDIYKDP 193
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 194 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 245
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 246 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 147 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 204
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 264
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 147 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 204
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 264
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 148 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 205
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 265
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 135 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 192
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 252
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 147 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 204
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 264
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 153
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 154 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 211
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 212 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 271
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 272 HLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 134 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 191
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 251
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 45/221 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNV--HYSRASQRMPLIYVKLYTY------------------------------QIC 168
L HPN+ +Y R R + Y Q+
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 169 RALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYICSR 223
AL H GG V HRD+KP N+ ++ VKL DFG A++L +++ +
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTP 180
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 181 YYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 88/221 (39%), Gaps = 45/221 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKV------LQDKRYKNRELQTMRL 140
P + Y +G GS+G + + G+ + K++ +K+ E+ +R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 141 LDHPNV--HYSRASQRMPLIYVKLYTY------------------------------QIC 168
L HPN+ +Y R R + Y Q+
Sbjct: 62 LKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121
Query: 169 RALAYIH----GGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYICSR 223
AL H GG V HRD+KP N+ ++ VKL DFG A++L +++ +
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTP 180
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGES 264
YY +PE + Y DIWS+GC+L EL P F S
Sbjct: 181 YYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 119 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 176
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 236
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 50/200 (25%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLL------DHP 144
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 145 NVHYS--RASQRMPLIYVK---------------------LYTYQICRALAYIHGGIGVC 181
V Y R S R+ + Y+ LY+ QIC+ + Y+ G
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-GSRRCV 136
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGA 234
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE +
Sbjct: 137 HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SD 191
Query: 235 TEYTTAVDIWSVGCVLAELL 254
++ D+WS G VL EL
Sbjct: 192 NIFSRQSDVWSFGVVLYELF 211
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 118 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 175
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 176 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 235
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 236 HLIRWCLALRPSDRPTFEEIQNHPW 260
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 120 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 177
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 237
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 94/210 (44%), Gaps = 46/210 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLETGET---VAIKKV-----LQDKRYKNRELQTM 138
P + + ++RV+G+G FG+V+ + ++ + AIK + +Q RE M
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 139 RLLDHPNV---------------------------HYSRASQRMPLIYVKL-YTYQICRA 170
R L+HPNV + R+ QR P + + + Q+ R
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG 136
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ + VK+ DFG A+ ++ E S R+ R P +
Sbjct: 137 MEYL-AEQKFVHRDLAARNCMLD-ESFTVKVADFGLARDILDRE-YYSVQQHRHARLP-V 192
Query: 231 IFGATE------YTTAVDIWSVGCVLAELL 254
+ A E +TT D+WS G +L ELL
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV-----HY 148
+G+GSFG V++ T E VAIK + + +E+ + D P + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 149 SRASQRMPLI--------------------YVKLYTYQICRALAYIHGGIGVCHRDIKPQ 188
++++ ++ Y+ +I + L Y+H + HRDIK
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKI-HRDIKAA 145
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ VKL DFG A L + ++ + ++ APE+I + Y DIWS+G
Sbjct: 146 NVLLSEQG-DVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSAYDFKADIWSLG 203
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 204 ITAIELAKGEP 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 120 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 177
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 237
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 120 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 177
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 178 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 237
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 238 HLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 119 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 176
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 177 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 236
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 237 HLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 50/200 (25%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLL------DHP 144
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 145 NVHYS--RASQRMPLIYVK---------------------LYTYQICRALAYIHGGIGVC 181
V Y R S R+ + Y+ LY+ QIC+ + Y+ G
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-GSRRCV 137
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGA 234
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE +
Sbjct: 138 HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SD 192
Query: 235 TEYTTAVDIWSVGCVLAELL 254
++ D+WS G VL EL
Sbjct: 193 NIFSRQSDVWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 89/200 (44%), Gaps = 50/200 (25%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLL------DHP 144
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 145 NVHYS--RASQRMPLIYVK---------------------LYTYQICRALAYIHGGIGVC 181
V Y R S R+ + Y+ LY+ QIC+ + Y+ G
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-GSRRCV 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGA 234
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE +
Sbjct: 150 HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYAPESL-SD 204
Query: 235 TEYTTAVDIWSVGCVLAELL 254
++ D+WS G VL EL
Sbjct: 205 NIFSRQSDVWSFGVVLYELF 224
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 115 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 172
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQ 232
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 115 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 172
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 232
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 146
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 147 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 204
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 205 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 264
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 265 HLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 148 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 205
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 265
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 147
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 148 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 205
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 206 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQ 265
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 266 HLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 166
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 167 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 224
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 225 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 284
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 285 HLIRWCLALRPSDRPTFEEIQNHPW 309
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 135 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 192
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 252
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 253 HLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 133
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 134 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 191
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 192 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 251
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 252 HLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 112/265 (42%), Gaps = 45/265 (16%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 161
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 279
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL------ 135
G+ +P ++ Y ++G G FG V+ + VAIK V +D+ EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 136 ---------------QTMRLLD---HPNVH-------------YSRASQRMPLI--YVKL 162
+RLLD P+ + ++R L +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 134
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 135 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 192
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
R Y PE I + + +WS+G +L +++ G
Sbjct: 193 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 227
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 115 FFWQVLEAVRHCHN-XGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 172
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 232
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 233 HLIRWCLALRPSDRPTFEEIQNHPW 257
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 100/259 (38%), Gaps = 72/259 (27%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQN----------------------- 189
Q +P+ VK Q+ + L Y+H + H DIKP+N
Sbjct: 135 QGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKA 194
Query: 190 -----------------LLVNP------HTHQVKLCDFGSAKVLVKGEPNISYICSRYYR 226
LLVNP +VK+ D G+A + K I +R YR
Sbjct: 195 GAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYR 252
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGTPT 280
+ E++ GA Y+T DIWS C+ EL G LF SG D + II++LG+
Sbjct: 253 SIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIP 311
Query: 281 REEIKCMNPNYTEFKFPQ-------IKAHPW---HKIFHKRMPP-----EAVDLVSRLLQ 325
R ++ Y+ F + K PW + K P + D + +L+
Sbjct: 312 RH--FALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLE 369
Query: 326 YSPNLRCTALEACIHPFFD 344
P R +A E HP+ +
Sbjct: 370 MVPEKRASAGECLRHPWLN 388
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ +Q+ A+ + H GV HRDIK +N+L++ + ++KL DFGS L+K + +
Sbjct: 142 FFWQVLEAVRHCHN-CGVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 199
Query: 223 RYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ-PLFPGESGVDQLVEIIKVLGTPTR 281
R Y PE I + + +WS+G +L +++ G P E + V + + +
Sbjct: 200 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQ 259
Query: 282 EEIK-CMNPNYTEF-KFPQIKAHPW 304
I+ C+ ++ F +I+ HPW
Sbjct: 260 HLIRWCLALRPSDRPTFEEIQNHPW 284
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 113/294 (38%), Gaps = 68/294 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H +
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIA 130
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++KL DFG A + G + + + APE++
Sbjct: 131 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-NYEPLG 189
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F GE+ + L I +N ++ E F
Sbjct: 190 LEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVNYDFDEEYFSN 237
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNAR 352
A D + RLL P R T ++ H + +R N R
Sbjct: 238 -------------TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRNVR 278
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 50/200 (25%)
Query: 99 VGQGSFGIV----FQAKCLETGETVAIKKVLQD----KRYKNRELQTMRLL------DHP 144
+G+G+FG V + TG VA+K++ +R RE+Q ++ L +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 145 NVHYS-----------------------RASQRMPLIYVKLYTYQICRALAYIHGGIGVC 181
V Y R R+ + LY+ QIC+ + Y+ G
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-GSRRCV 133
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVL-------VKGEPNISYICSRYYRAPELIFGA 234
HRD+ +N+LV H VK+ DFG AK+L V EP S I ++ APE +
Sbjct: 134 HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYAPESL-SD 188
Query: 235 TEYTTAVDIWSVGCVLAELL 254
++ D+WS G VL EL
Sbjct: 189 NIFSRQSDVWSFGVVLYELF 208
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 97 RVVGQGSFGIV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV- 146
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
+ + ++ L Y QIC+ + Y+ G
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-GSR 145
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPELIFGA 234
HRD+ +N+LV HQVK+ DFG K + + + R ++ APE +
Sbjct: 146 QYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM-Q 203
Query: 235 TEYTTAVDIWSVGCVLAELL 254
+++ A D+WS G L ELL
Sbjct: 204 SKFYIASDVWSFGVTLHELL 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 42/213 (19%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNV-------HYSRA------------------SQRMPLI--YVKLYTYQICRA 170
+ DHPN+ +Y PL +++ Q A
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPE 229
L Y+H + HRD+K N+L +KL DFG SAK + S+I + Y+ APE
Sbjct: 148 LNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPE 205
Query: 230 LIFGATE----YTTAVDIWSVGCVLAELLLGQP 258
++ T Y D+WS+G L E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 42/213 (19%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNV-------HYSRA------------------SQRMPLI--YVKLYTYQICRA 170
+ DHPN+ +Y PL +++ Q A
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPE 229
L Y+H + HRD+K N+L +KL DFG SAK + S+I + Y+ APE
Sbjct: 148 LNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPE 205
Query: 230 LIFGATE----YTTAVDIWSVGCVLAELLLGQP 258
++ T Y D+WS+G L E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 97/261 (37%), Gaps = 74/261 (28%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV-------------------- 192
Q +PL VK Q+ + L Y+H + H DIKP+N+L+
Sbjct: 141 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRS 200
Query: 193 ----------------------------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
N +VK+ D G+A + K I +R
Sbjct: 201 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQ 258
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGT 278
YR+ E++ G+ Y T DIWS C+ EL G LF SG D + II++LG
Sbjct: 259 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 317
Query: 279 PTREEIKCMNPNYTEFKFPQ-------IKAHPWHKI--------FHKRMPPEAVDLVSRL 323
R+ I + Y++ F + K PW + + D + +
Sbjct: 318 VPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM 375
Query: 324 LQYSPNLRCTALEACIHPFFD 344
L+ P R TA E HP+ +
Sbjct: 376 LELIPEKRATAAECLRHPWLN 396
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 45/200 (22%)
Query: 97 RVVGQGSFGIV----FQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV- 146
R +G+G FG V + + TGE VA+K + + + +E++ +R L H N+
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
+ + ++ L Y QIC+ + Y+ G
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL-GSR 133
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR----YYRAPELIFGA 234
HRD+ +N+LV HQVK+ DFG K + + + R ++ APE +
Sbjct: 134 QYVHRDLAARNVLVESE-HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM-Q 191
Query: 235 TEYTTAVDIWSVGCVLAELL 254
+++ A D+WS G L ELL
Sbjct: 192 SKFYIASDVWSFGVTLHELL 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 149 SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA- 207
S+ R+P + Y ++ A+ +H + HRDIKP N+L++ + H ++L DFGS
Sbjct: 166 SKFEDRLPEEMARFYLAEMVIAIDSVHQ-LHYVHRDIKPDNILMDMNGH-IRLADFGSCL 223
Query: 208 KVLVKGEPNISY-ICSRYYRAPELI----FGATEYTTAVDIWSVGCVLAELLLGQPLFPG 262
K++ G S + + Y +PE++ G Y D WS+G + E+L G+ F
Sbjct: 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283
Query: 263 ESGVDQLVEIIK 274
ES V+ +I+
Sbjct: 284 ESLVETYGKIMN 295
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 34/191 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-----LQDKRYKNRELQTMRLLDHPNV-----HY 148
+G+GSFG VF+ T + VAIK + + +E+ + D V Y
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 149 SRASQRM------------------PLIYVKLYTY--QICRALAYIHGGIGVCHRDIKPQ 188
+ S+ P ++ T +I + L Y+H + HRDIK
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI-HRDIKAA 149
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGE-PNISYICSRYYRAPELIFGATEYTTAVDIWSVG 247
N+L++ VKL DFG A L + +++ + ++ APE+I + Y + DIWS+G
Sbjct: 150 NVLLSEQG-DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYDSKADIWSLG 207
Query: 248 CVLAELLLGQP 258
EL G+P
Sbjct: 208 ITAIELAKGEP 218
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 97/261 (37%), Gaps = 74/261 (28%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLV-------------------- 192
Q +PL VK Q+ + L Y+H + H DIKP+N+L+
Sbjct: 125 QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRS 184
Query: 193 ----------------------------NPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
N +VK+ D G+A + K I +R
Sbjct: 185 GAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQ 242
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESG------VDQLVEIIKVLGT 278
YR+ E++ G+ Y T DIWS C+ EL G LF SG D + II++LG
Sbjct: 243 YRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGK 301
Query: 279 PTREEIKCMNPNYTEFKFPQ-------IKAHPWHKI--------FHKRMPPEAVDLVSRL 323
R+ I + Y++ F + K PW + + D + +
Sbjct: 302 VPRKLI--VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM 359
Query: 324 LQYSPNLRCTALEACIHPFFD 344
L+ P R TA E HP+ +
Sbjct: 360 LELIPEKRATAAECLRHPWLN 380
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 87/198 (43%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 147 -----------------------HYSRASQ-RMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + + + L + LY YQ+ ALAY+ V H
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV-H 514
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ T VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 515 RDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 569
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 570 TSASDVWMFGVCMWEILM 587
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLLDHPN-----VHY 148
V+G+GSFG V ++ T E A+K + +D ++ +++ TM R+L P
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 149 SRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIGVCHR 183
Q M +Y + Y +I L ++ G+ +R
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYR 145
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K N++++ H +K+ DFG K + C Y APE+I Y +VD
Sbjct: 146 DLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKSVD 203
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
W+ G +L E+L GQ F GE D+L + I
Sbjct: 204 WWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 14/155 (9%)
Query: 155 MPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE 214
+ L ++ Y++Q+ + + ++ HRD+ +N+L++ + VK+ DFG A+ + K
Sbjct: 141 LTLEHLIXYSFQVAKGMEFL-ASRKXIHRDLAARNILLS-EKNVVKIXDFGLARDIYKDP 198
Query: 215 PNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLV 270
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 199 DYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 250
Query: 271 EIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWH 305
+I + +E + P+YT + Q WH
Sbjct: 251 KIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 215
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 166 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 274
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 224 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 84/212 (39%), Gaps = 53/212 (25%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRY-KNRELQTMRLLDHPNV----------- 146
+G GS+G VF+ + E G A+K+ + R K+R + + H V
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H +P V Y ALA++H G+ H D+
Sbjct: 125 AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS-QGLVHLDV 183
Query: 186 KPQNLLVNPHTHQVKLCDFG--------SAKVLVKGEPNISYICSRYYRAPELIFGATEY 237
KP N+ + P + KL DFG A + +G+P Y APEL+ G+ Y
Sbjct: 184 KPANIFLGPRG-RCKLGDFGLLVELGTAGAGEVQEGDPR--------YMAPELLQGS--Y 232
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQL 269
TA D++S+G + E+ L G G QL
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 65/294 (22%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQD-KRYKNRELQTMRLLD-HPNV-- 146
IS+ + V+G G+ G + + + VA+K++L + + +RE+Q +R D HPNV
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 147 HYSRASQR------MPLIYVKLYTY------------------QICRALAYIHGGIGVCH 182
++ R + L L Y Q LA++H + + H
Sbjct: 83 YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-SLNIVH 141
Query: 183 RDIKPQNLLVN-PHTH---QVKLCDFGSAKVLVKGEPNISYIC----SRYYRAPELIFGA 234
RD+KP N+L++ P+ H + + DFG K L G + S + + APE++
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 235 TEY--TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT 292
+ T VDI+S GCV ++ + P + + I+ LG + + C++P
Sbjct: 202 CKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LGACS---LDCLHPEKH 255
Query: 293 EFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
E A +L+ +++ P R +A HPFF L
Sbjct: 256 EDVI-------------------ARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
ERV+G G FG V + G+ VAIK + K R E M DHPN+
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
+ ++ P++ V Y Q+ L I G+ G
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + APE I +
Sbjct: 147 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTAPEAI-AFRK 203
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G V+ E++
Sbjct: 204 FTSASDVWSYGIVMWEVV 221
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV-H 134
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ T VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 135 RDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 189
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 190 TSASDVWMFGVCMWEILM 207
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 215
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 168 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 274
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 226 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 215
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 150 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 274
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 208 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 82/213 (38%), Gaps = 58/213 (27%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHY-------- 148
++G G FG VF+AK G+T I++V + RE++ + LDH N VHY
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 149 -----------------------SRASQRMPLIYV------------------KLYTYQI 167
SR+ + I + KL
Sbjct: 79 YDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 138
Query: 168 CRALAYIHGGIGVCH------RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYIC 221
I G+ H RD+KP N+ + T QVK+ DFG L
Sbjct: 139 LELFEQITKGVDYIHSKKLIHRDLKPSNIFL-VDTKQVKIGDFGLVTSLKNDGKRTRSKG 197
Query: 222 SRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ Y +PE I + +Y VD++++G +LAELL
Sbjct: 198 TLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 215
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 274
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYI 220
+ + Q+ A+ + H GV HRDIK +N+L++ KL DFGS L+ EP +
Sbjct: 142 RCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYTDFD 199
Query: 221 CSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQ 257
+R Y PE I + +WS+G +L +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 15/120 (12%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLVKGEP 215
++YQ+ + +A++ HRD+ +N+L+ H K+CDFG A+ +VKG
Sbjct: 173 FSYQVAKGMAFL-ASKNCIHRDLAARNILLT-HGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 216 NISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIK 274
+ + APE IF YT D+WS G L EL LG +PG + ++IK
Sbjct: 231 RLPV----KWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ-TM---RLLDHPN-----VHY 148
V+G+GSFG V ++ T E A+K + +D ++ +++ TM R+L P
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 149 SRASQRMPLIYVKL-------------------------YTYQICRALAYIHGGIGVCHR 183
Q M +Y + Y +I L ++ G+ +R
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYR 466
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-YYRAPELIFGATEYTTAVD 242
D+K N++++ H +K+ DFG K + C Y APE+I Y +VD
Sbjct: 467 DLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKSVD 524
Query: 243 IWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
W+ G +L E+L GQ F GE D+L + I
Sbjct: 525 WWAFGVLLYEMLAGQAPFEGED-EDELFQSI 554
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 120/318 (37%), Gaps = 83/318 (26%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMR----------------- 139
+V+G+G+F V K +TG+ A+K + + K E+ R
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 140 --LLDHPNVHY---------------SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
N Y S+ +R+P + Y +I A+ +H +G H
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR-LGYVH 185
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSA-KVLVKGE-PNISYICSRYYRAPELIFGATEYTTA 240
RDIKP N+L++ H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 186 RDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGT 244
Query: 241 V------DIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEF 294
D W++G E+ GQ F +S + +I+
Sbjct: 245 GSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV--------------------- 283
Query: 295 KFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRC---TALEACIHPFF-----DEL 346
K H + + +P EA D + RLL P R A + HPFF D L
Sbjct: 284 ---HYKEHLSLPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFFFGLDWDGL 339
Query: 347 RDPNARLPNGRPFPPLFN 364
RD +P PF P F
Sbjct: 340 RDS---VP---PFTPDFE 351
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 100/314 (31%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPN-VHY 148
+G+G FG+VF+AK AIK++ R NREL + + L+HP V Y
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 149 SRA------SQRMPLIYVKLYTY---QICR------------------------------ 169
A ++++ K+Y Y Q+CR
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 170 -ALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNISY-- 219
A+ ++H G+ HRD+KP N+ VK+ DFG + + E P +Y
Sbjct: 129 EAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 220 ----ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKV 275
+ ++ Y +PE I G + Y+ VDI+S+G +L EL L+P + ++++ + V
Sbjct: 187 HTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLTDV 240
Query: 276 LGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTAL 335
KFP +F ++ P E V +V +L SP R A+
Sbjct: 241 ----------------RNLKFP--------PLFTQKYPCEYV-MVQDMLSPSPMERPEAI 275
Query: 336 EACIHPFFDELRDP 349
+ F++L P
Sbjct: 276 NIIENAVFEDLDFP 289
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 42/213 (19%)
Query: 83 RNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQT 137
R+ P+ + E +G G+FG V++A+ ET +A KV+ K + E +
Sbjct: 31 RDLNPEDFWEIIGE--LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 138 MRLLDHPNV-------HYSRA------------------SQRMPLI--YVKLYTYQICRA 170
+ DHPN+ +Y PL +++ Q A
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFG-SAKVLVKGEPNISYICSRYYRAPE 229
L Y+H + HRD+K N+L +KL DFG SAK + +I + Y+ APE
Sbjct: 148 LNYLHDN-KIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPE 205
Query: 230 LIFGATE----YTTAVDIWSVGCVLAELLLGQP 258
++ T Y D+WS+G L E+ +P
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 127/323 (39%), Gaps = 79/323 (24%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNV-- 146
V+G+G F +V + ETG+ A+K V K + RE +L HP++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 147 -HYSRASQRMPLIYVKL---------------------------YTYQICRALAYIHGGI 178
+ +S M + + Y QI AL Y H
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 151
Query: 179 GVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFG 233
+ HRD+KP +L+ ++ VKL FG A L GE + + + ++ APE++
Sbjct: 152 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVV-K 208
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VD+W G +L LL G F G ++L E I + + K MNP
Sbjct: 209 REPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKYK-MNPR--- 256
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA-- 351
W I A DLV R+L P R T EA HP+ E RD A
Sbjct: 257 ---------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYK 301
Query: 352 -RLPNGRPFPPLFNFKPQELKGA 373
LP FN + ++LKGA
Sbjct: 302 IHLPETVEQLRKFNAR-RKLKGA 323
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 24/139 (17%)
Query: 159 YVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK-------VLV 211
Y +L+ QI AL+YIH G+ HR++KP N+ ++ + VK+ DFG AK +L
Sbjct: 118 YWRLFR-QILEALSYIHSQ-GIIHRNLKPXNIFIDE-SRNVKIGDFGLAKNVHRSLDILK 174
Query: 212 KGEPNI--------SYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGE 263
N+ S I + Y A E++ G Y +D +S+G + E ++P
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE-----XIYPFS 229
Query: 264 SGVDQLVEIIKVLGTPTRE 282
+G ++ V I+K L + + E
Sbjct: 230 TGXER-VNILKKLRSVSIE 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 49/206 (23%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK-NRELQTMRLLDHPN--------- 145
+VG G++G V++ + ++TG+ AIK V D+ + +E+ ++ H
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 146 ---------------VHYSRASQRMPLI-----------YVKLYTYQICRALAYIHGGIG 179
+ + A LI ++ +I R L+++H
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-K 149
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISYICSRYYRAPELIF----- 232
V HRDIK QN+L+ + +VKL DFG + L + G N ++I + Y+ APE+I
Sbjct: 150 VIHRDIKGQNVLLTENA-EVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIACDENP 207
Query: 233 GATEYTTAVDIWSVGCVLAELLLGQP 258
AT Y D+WS+G E+ G P
Sbjct: 208 DAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 127/323 (39%), Gaps = 79/323 (24%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---------RELQTMRLLDHPNV-- 146
V+G+G F +V + ETG+ A+K V K + RE +L HP++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 147 -HYSRASQRMPLIYVKL---------------------------YTYQICRALAYIHGGI 178
+ +S M + + Y QI AL Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN- 149
Query: 179 GVCHRDIKPQNLLV--NPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFG 233
+ HRD+KP +L+ ++ VKL FG A L GE + + + ++ APE++
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGTPHFMAPEVV-K 206
Query: 234 ATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTE 293
Y VD+W G +L LL G F G ++L E I + + K MNP
Sbjct: 207 REPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI------IKGKYK-MNPR--- 254
Query: 294 FKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNA-- 351
W I A DLV R+L P R T EA HP+ E RD A
Sbjct: 255 ---------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPWLKE-RDRYAYK 299
Query: 352 -RLPNGRPFPPLFNFKPQELKGA 373
LP FN + ++LKGA
Sbjct: 300 IHLPETVEQLRKFNAR-RKLKGA 321
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 147 -----------------------HYSRASQ-RMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + + + L + LY YQ+ ALAY+ V H
Sbjct: 456 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV-H 514
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 515 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 569
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 570 TSASDVWMFGVCMWEILM 587
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 73 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 131
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 132 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 186
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 187 TSASDVWMFGVCMWEILM 204
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 68/294 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H +
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIA 151
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++KL DFG A + G + + + APE++
Sbjct: 152 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-NYEPLG 210
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F GE+ + L I +N ++ E F
Sbjct: 211 LEADMWSIGVITYILLSGASPFLGETKQETLTNI------------SAVNYDFDEEYFSN 258
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNAR 352
A D + RLL P R ++ H + +R N R
Sbjct: 259 -------------TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIRRRNVR 299
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 134
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 135 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 189
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 190 TSASDVWMFGVCMWEILM 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 79 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 137
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 138 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 192
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 193 TSASDVWMFGVCMWEILM 210
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 112/302 (37%), Gaps = 66/302 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
Y + V+G G+ +V A C E VAIK++ +K + +E+Q M HPN+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 147 --HYSRASQRMPLIYV-KLYT-------------------------------YQICRALA 172
+Y+ + L V KL + ++ L
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICSRYYR 226
Y+H G HRD+K N+L+ V++ DFG + L G + +++ + +
Sbjct: 136 YLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
APE++ Y DIWS G EL G P V ++ + P
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDP------- 244
Query: 287 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
P ++ K K+ ++S LQ P R TA E H FF +
Sbjct: 245 ----------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
Query: 347 RD 348
++
Sbjct: 295 KN 296
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 78 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 136
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 137 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 191
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 192 TSASDVWMFGVCMWEILM 209
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 104 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 162
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 163 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 217
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 218 TSASDVWMFGVCMWEILM 235
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 153 QRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVL-- 210
Q++P+ Y +I AL+Y+H IG+ + D+KP+N+++ Q+KL D G+ +
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHS-IGLVYNDLKPENIMLT--EEQLKLIDLGAVSRINS 233
Query: 211 ---VKGEPNISYICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
+ G P ++APE++ T T A DI++VG LA L L P G VD
Sbjct: 234 FGYLYGTPG--------FQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VD 282
Query: 268 QLVEIIKVLGT 278
L E VL T
Sbjct: 283 GLPEDDPVLKT 293
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 134
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 135 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 189
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 190 TSASDVWMFGVCMWEILM 207
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 84/198 (42%), Gaps = 45/198 (22%)
Query: 97 RVVGQGSFGIVFQAKCLETGE---TVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 147 ------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ L + LY YQ+ ALAY+ V H
Sbjct: 81 LIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFV-H 139
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATEY 237
RDI +N+LV+ + VKL DFG ++ + E + Y S+ + APE I +
Sbjct: 140 RDIAARNVLVSSNDC-VKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESI-NFRRF 194
Query: 238 TTAVDIWSVGCVLAELLL 255
T+A D+W G + E+L+
Sbjct: 195 TSASDVWMFGVCMWEILM 212
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 43/215 (20%)
Query: 85 GQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMR 139
G+ Q S M+ +G G+FG V+ A E + V +K KVL+D ++ +L +
Sbjct: 20 GEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77
Query: 140 L-------LDHPNV-------------------HYSRAS-----QRMPLIYVKLYTY--- 165
L ++H N+ H S R P + L +Y
Sbjct: 78 LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 225
Q+ A+ Y+ + HRDIK +N+++ +KL DFGSA L +G+ ++ + Y
Sbjct: 138 QLVSAVGYLRLK-DIIHRDIKDENIVI-AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 226 RAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLF 260
APE++ G +++WS+G L L+ + F
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 149 SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA- 207
S+ ++P + Y ++ A+ IH + HRDIKP N+L++ + H ++L DFGS
Sbjct: 182 SKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRDIKPDNVLLDVNGH-IRLADFGSCL 239
Query: 208 KVLVKGEPNISY-ICSRYYRAPELI----FGATEYTTAVDIWSVGCVLAELLLGQPLFPG 262
K+ G S + + Y +PE++ G +Y D WS+G + E+L G+ F
Sbjct: 240 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 299
Query: 263 ESGVDQLVEIIKVLGTPTREEIKCMNPNYTE-FKFPQIKAHPWHKIFHKRMPPEAVDLVS 321
ES V+ +I+ N+ E F+FP +H + EA DL+
Sbjct: 300 ESLVETYGKIM----------------NHEERFQFP---SHV------TDVSEEAKDLIQ 334
Query: 322 RLL-QYSPNLRCTALEAC-IHPFFDELRDPNAR 352
RL+ L +E H FF+ L N R
Sbjct: 335 RLICSRERRLGQNGIEDFKKHAFFEGLNWENIR 367
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 149 SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSA- 207
S+ ++P + Y ++ A+ IH + HRDIKP N+L++ + H ++L DFGS
Sbjct: 166 SKFEDKLPEDMARFYIGEMVLAIDSIHQ-LHYVHRDIKPDNVLLDVNGH-IRLADFGSCL 223
Query: 208 KVLVKGEPNISY-ICSRYYRAPELI----FGATEYTTAVDIWSVGCVLAELLLGQPLFPG 262
K+ G S + + Y +PE++ G +Y D WS+G + E+L G+ F
Sbjct: 224 KMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 283
Query: 263 ESGVDQLVEIIK 274
ES V+ +I+
Sbjct: 284 ESLVETYGKIMN 295
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 37 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 147 --------HYSRASQRMPLIYVKL-------------------YTYQICRALAYIHGGIG 179
AS ++ + YV L + QIC +AY+H
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 155
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG-------EPNISYICSRYYRAPELIF 232
+ HRD+ +N+L++ + VK+ DFG AK + +G E S + ++ APE +
Sbjct: 156 I-HRDLAARNVLLD-NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV---FWYAPECL- 209
Query: 233 GATEYTTAVDIWSVGCVLAELL 254
++ A D+WS G L ELL
Sbjct: 210 KEYKFYYASDVWSFGVTLYELL 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 111/301 (36%), Gaps = 66/301 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----RELQTMRLLDHPNV 146
Y + V+G G+ +V A C E VAIK++ +K + +E+Q M HPN+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 147 --HYSRASQRMPLIYV-KLYT-------------------------------YQICRALA 172
+Y+ + L V KL + ++ L
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 173 YIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKG------EPNISYICSRYYR 226
Y+H G HRD+K N+L+ V++ DFG + L G + +++ + +
Sbjct: 131 YLHKN-GQIHRDVKAGNILLG-EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 227 APELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
APE++ Y DIWS G EL G P V ++ + P
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAA--PYHKYPPMKVLMLTLQNDP------- 239
Query: 287 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDEL 346
P ++ K K+ ++S LQ P R TA E H FF +
Sbjct: 240 ----------PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
Query: 347 R 347
+
Sbjct: 290 K 290
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV- 146
ERV+G G FG V + G+ VAIK + K R E M DHPNV
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 147 HYSRASQR-MPLIYV------------------KLYTYQICRALAYIHGGI------GVC 181
H R P++ V + Q+ L I G+ G
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+LVN + K+ DFG ++V ++ +P Y + + APE I +
Sbjct: 168 HRDLAARNILVNSNL-VCKVSDFGLSRV-IEDDPEAVYTTTGGKIPVRWTAPEAI-QYRK 224
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G V+ E++
Sbjct: 225 FTSASDVWSYGIVMWEVM 242
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 75
Query: 147 --------------------HYSRASQ-RMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H+ AS+ + + + Q R + Y+H + HRD+
Sbjct: 76 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDL 134
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIF--GATEYTTA 240
K N+ ++ + VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 135 KSNNIFLH-EDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----H 147
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 87
Query: 148 YSRASQRMPL--------IYVKLYTY--------------QICRALAYIHGGIGVCHRDI 185
YS A Q + +Y L+ Q R + Y+H + HRD+
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDL 146
Query: 186 KPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF--GATEYTTA 240
K N+ ++ + VK+ DFG A K G + S + APE+I + Y+
Sbjct: 147 KSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
+ YQ+ + + ++ V HRD+ +N+LV H VK+CDFG A+ ++ + +
Sbjct: 177 FAYQVAKGMEFLEFKSCV-HRDLAARNVLVT-HGKVVKICDFGLARDIMSDSNYVVRGNA 234
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE +F YT D+WS G +L E+ LG +PG
Sbjct: 235 RLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 135
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 194
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 242
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 243 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 135
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 136 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 194
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 195 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 242
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 243 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 87/201 (43%), Gaps = 51/201 (25%)
Query: 97 RVVGQGSFGIVFQAKCLET---GETVAIK--KVLQDKRYKNRELQ---TMRLLDHPNV-- 146
R +G+G FG V Q + VAIK K + + LQ TMR DHP++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 147 -----------------------HYSRASQ-RMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + + + L + LY YQ+ ALAY+ V H
Sbjct: 76 LIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFV-H 134
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVL--------VKGEPNISYICSRYYRAPELIFGA 234
RDI +N+LV+ + VKL DFG ++ + KG+ I ++ APE I
Sbjct: 135 RDIAARNVLVSSNDC-VKLGDFGLSRYMEDSTXXKASKGKLPIKWM------APESI-NF 186
Query: 235 TEYTTAVDIWSVGCVLAELLL 255
+T+A D+W G + E+L+
Sbjct: 187 RRFTSASDVWMFGVCMWEILM 207
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 46/217 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVH 147
++ ++GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 148 YSRASQRMPLIYVKLYTYQIC------------------------RALAYIHGGI----- 178
A + K+ + C L + GG+
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 179 -GVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
G+ HR+IKP N++ + V KL DFG+A+ L E +S + Y P++ A
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERA 190
Query: 235 T-------EYTTAVDIWSVGCVLAELLLGQ-PLFPGE 263
+Y VD+WS+G G P P E
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 52/203 (25%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNV------ 146
+G GSFG V +A+ G VA+K +++ + R E+ M+ L HPN+
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 147 -----------------------HYSRASQRMPLIYVKLYTYQICRALAYIHG-GIGVCH 182
H S A +++ Y + + + Y+H + H
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVH 162
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATE 236
RD+K NLLV+ + VK+CDFG +++ ++ S+ + APE++
Sbjct: 163 RDLKSPNLLVD-KKYTVKVCDFGLSRLKAS-----XFLXSKXAAGTPEWMAPEVLRDEPS 216
Query: 237 YTTAVDIWSVGCVLAEL-LLGQP 258
+ D++S G +L EL L QP
Sbjct: 217 NEKS-DVYSFGVILWELATLQQP 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 119/322 (36%), Gaps = 91/322 (28%)
Query: 82 GRNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNR-------- 133
G +G Q Y + +G+GS+G+V A E T KVL K+ +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYN-ENDNTYYAMKVLSKKKLIRQAGFPRRPP 62
Query: 134 -----------------------ELQTMRLLDHPNV-------------HYSRASQRM-- 155
E+ ++ LDHPNV H + +
Sbjct: 63 PRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQ 122
Query: 156 -PLIYV-----------KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCD 203
P++ V + Y + + + Y+H + HRDIKP NLLV H +K+ D
Sbjct: 123 GPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLVGEDGH-IKIAD 180
Query: 204 FGSAKVLVKGEPNIS-YICSRYYRAPELIFGATEYTT--AVDIWSVGCVLAELLLGQPLF 260
FG + + +S + + + APE + + + A+D+W++G L + GQ F
Sbjct: 181 FGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
Query: 261 PGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLV 320
E I C++ +IK+ + + DL+
Sbjct: 241 -------------------MDERIMCLH--------SKIKSQALEFPDQPDIAEDLKDLI 273
Query: 321 SRLLQYSPNLRCTALEACIHPF 342
+R+L +P R E +HP+
Sbjct: 274 TRMLDKNPESRIVVPEIKLHPW 295
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNV---- 146
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 147 HYSRASQRMPLIYVKLYTYQICRALAYIHG------------------GIGVCH------ 182
+S + L+YV + + L+ + G GI H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTT 239
RDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 157 RDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG--EITP 213
Query: 240 AVDIWSVGCVLAELLLGQP 258
DI+S G VL E++ G P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNV---- 146
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 147 HYSRASQRMPLIYVKLYTYQICRALAYIHG------------------GIGVCH------ 182
+S + L+YV + + L+ + G GI H
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTT 239
RDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 157 RDIKSANILLD-EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG--EITP 213
Query: 240 AVDIWSVGCVLAELLLGQP 258
DI+S G VL E++ G P
Sbjct: 214 KSDIYSFGVVLLEIITGLP 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 39/199 (19%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN---RELQTMRLLDHPN-VHYSRASQR 154
+G G FG V++ + TVA+K + +D +E M+ + HPN V R
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 155 MPLIYV--KLYTY-------------------------QICRALAYIHGGIGVCHRDIKP 187
P Y+ + TY QI A+ Y+ HRD+
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAA 137
Query: 188 QNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAVDIW 244
+N LV + H VK+ DFG ++ L+ G+ ++ +++ + APE + +++ D+W
Sbjct: 138 RNCLVGEN-HLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESL-AYNKFSIKSDVW 194
Query: 245 SVGCVLAEL-LLGQPLFPG 262
+ G +L E+ G +PG
Sbjct: 195 AFGVLLWEIATYGMSPYPG 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 87
Query: 147 --------------------HYSRASQ-RMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H+ AS+ + + + Q R + Y+H + HRD+
Sbjct: 88 YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDL 146
Query: 186 KPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIF--GATEYTTA 240
K N+ ++ + VK+ DFG A K G + S + APE+I + Y+
Sbjct: 147 KSNNIFLH-EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++E++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 44/199 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNV---- 146
+G+G FG+V++ T TVA+KK+ + K+ ++E++ M H N+
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 147 HYSRASQRMPLIYVKLYTYQICRALAYIHG------------------GIGV------CH 182
+S + L+YV + + L+ + G GI H
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTT 239
RDIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 151 RDIKSANILLD-EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG--EITP 207
Query: 240 AVDIWSVGCVLAELLLGQP 258
DI+S G VL E++ G P
Sbjct: 208 KSDIYSFGVVLLEIITGLP 226
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F +V + + TG A K ++ +R K+ RE+ ++ + HPNV
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 147 -HYSRASQRMPLIYV-------KLYTY-----------------QICRALAYIHGGIGVC 181
+ + +I + +L+ + QI + Y+H + +
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS-LQIA 136
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++K+ DFG A + G + + + APE++
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV-NYEPLG 195
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F G++ + L + +N + + F
Sbjct: 196 LEADMWSIGVITYILLSGASPFLGDTKQETLANV------------SAVNYEFEDEYFSN 243
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A A D + RLL P R T ++ HP+
Sbjct: 244 TSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG A+VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLARVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 33/189 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYSRASQRMPL 157
+G+GSFG V + + +TG A+KKV + + ++ EL L P V A + P
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAVREGPW 159
Query: 158 IYV-----------KLYTYQIC----RALAYIHGGIG---------VCHRDIKPQNLLVN 193
+ + +L Q C RAL Y+ + + H D+K N+L++
Sbjct: 160 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
Query: 194 PHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEYTTAVDIWSVG 247
LCDFG A L S + Y + APE++ G + VD+WS
Sbjct: 220 SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSC 278
Query: 248 CVLAELLLG 256
C++ +L G
Sbjct: 279 CMMLHMLNG 287
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ QI + Y+H + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ + APE++ D+WS+G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---- 233
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
++ + + F + A D + +LL R T EA
Sbjct: 234 ---------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASK 375
HP+ + + A + L NF+ Q ++ SK
Sbjct: 273 HPWITPVDNQQA-MVRRESVVNLENFRKQYVRRRSK 307
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 30/176 (17%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPH--THQVKLCDFGSAKVLVKGEPNISYICSR 223
QI + Y+H + H D+KPQN+L++ +K+ DFG ++ + + +
Sbjct: 139 QILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREE 283
Y APE I TTA D+W++G + LL F GE + + I +V
Sbjct: 198 EYLAPE-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV-------- 248
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
N +Y+E F + A D + LL +P R TA E C+
Sbjct: 249 ----NVDYSEETFSSVSQL-------------ATDFIQSLLVKNPEKRPTA-EICL 286
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVH 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN+
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
+ ++ P++ + Y Q+ L I G+
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+LVN + K+ DFG ++VL + +P +Y + APE I +
Sbjct: 154 HRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 210
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G V+ E++
Sbjct: 211 FTSASDVWSYGIVMWEVM 228
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 31/216 (14%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ QI + Y+H + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ + APE++ D+WS+G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
++ + + F A D + +LL R T EA
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQELKGASK 375
HP+ + + A + L NF+ Q ++ SK
Sbjct: 273 HPWITPVDNQQA-MVRRESVVNLENFRKQYVRRRSK 307
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 149 SRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAK 208
S +R P+ Y Q+ L Y+H G+ H+DIKP NLL+ +K+ G A+
Sbjct: 100 SVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTT-GGTLKISALGVAE 157
Query: 209 VL---VKGEPNISYICSRYYRAPELIFGATEYTT-AVDIWSVGCVLAELLLGQPLFPGES 264
L + + S ++ PE+ G ++ VDIWS G L + G F G++
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217
Query: 265 GVDQLVEIIKV--------LGTPTREEIKCM--NPNYTEFKFPQIKAHPWHKIFHKRMPP 314
+ +L E I G P + +K M F QI+ H W F K+ PP
Sbjct: 218 -IYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSW---FRKKHPP 273
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYSRASQRMPL 157
VG+GSFG V + K +TG A+KKV + + ++ EL L P V A + P
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 124
Query: 158 IYVKL-------------------------YTYQICRALAYIHGGIGVCHRDIKPQNLLV 192
+ + + Y Q L Y+H + H D+K N+L+
Sbjct: 125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLL 183
Query: 193 NPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEYTTAVDIWSV 246
+ + LCDFG A L S + Y + APE++ G VDIWS
Sbjct: 184 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSS 242
Query: 247 GCVLAELLLG 256
C++ +L G
Sbjct: 243 CCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYSRASQRMPL 157
VG+GSFG V + K +TG A+KKV + + ++ EL L P V A + P
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 140
Query: 158 IYVKL-------------------------YTYQICRALAYIHGGIGVCHRDIKPQNLLV 192
+ + + Y Q L Y+H + H D+K N+L+
Sbjct: 141 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLL 199
Query: 193 NPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEYTTAVDIWSV 246
+ + LCDFG A L S + Y + APE++ G VDIWS
Sbjct: 200 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSS 258
Query: 247 GCVLAELLLG 256
C++ +L G
Sbjct: 259 CCMMLHMLNG 268
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 98 VVGQ-GSFGIVFQAKCLETGETVAIKKVLQDKRYKNRE-----LQTMRLLDHPNV----- 146
++G+ G FG V++A+ ET +A KV+ K + E + + DHPN+
Sbjct: 16 IIGELGDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 147 --HYSRASQRM------------------PLI--YVKLYTYQICRALAYIHGGIGVCHRD 184
+Y + PL +++ Q AL Y+H + HRD
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN-KIIHRD 133
Query: 185 IKPQNLLVNPHTHQVKLCDFG-SAK-VLVKGEPNISYICSRYYRAPELIFGATE----YT 238
+K N+L +KL DFG SAK + S+I + Y+ APE++ T Y
Sbjct: 134 LKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 239 TAVDIWSVGCVLAELLLGQP 258
D+WS+G L E+ +P
Sbjct: 193 YKADVWSLGITLIEMAEIEP 212
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 46/217 (21%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIK-----KVLQDKRYKNRELQTMRLLDHPNVH 147
++ ++GQG+ VF+ + +TG+ AIK L+ + RE + ++ L+H N+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 148 YSRASQRMPLIYVKLYTYQIC------------------------RALAYIHGGI----- 178
A + K+ + C L + GG+
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE 130
Query: 179 -GVCHRDIKPQNLL--VNPHTHQV-KLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGA 234
G+ HR+IKP N++ + V KL DFG+A+ L E + + Y P++ A
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERA 190
Query: 235 T-------EYTTAVDIWSVGCVLAELLLGQ-PLFPGE 263
+Y VD+WS+G G P P E
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 116/309 (37%), Gaps = 67/309 (21%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYK--------NRELQTMRLLDHPN--- 145
+G G F IV + + TG A K K Q + + RE+ +R + HPN
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 146 ---VHYSRASQRMPLIYV---KLYTY-----------------QICRALAYIHGGIGVCH 182
V+ +R + L V +L+ + QI + Y+H + H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK-KIAH 138
Query: 183 RDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
D+KP+N+++ N +KL DFG A + G + + + APE++
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV-NYEPLGL 197
Query: 240 AVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 299
D+WS+G + LL G F G++ + L I V
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITAV------------------------ 233
Query: 300 KAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFFDELRDPNARLPNGRPF 359
++ + + F + A D + +LL R T EA HP+ + D +
Sbjct: 234 -SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV-DTQQAMVRRESV 291
Query: 360 PPLFNFKPQ 368
L NFK Q
Sbjct: 292 VNLENFKKQ 300
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 141 LDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVK 200
LDHP+ RA LI + +QI + + Y+ + + HRD+ +N+LV ++K
Sbjct: 139 LDHPD---ERALTMGDLIS---FAWQISQGMQYL-AEMSLVHRDLAARNILV-AEGRKMK 190
Query: 201 LCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LG 256
+ DFG ++ + + + + R + A E +F YTT D+WS G +L E++ LG
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLG 249
Query: 257 QPLFPG 262
+PG
Sbjct: 250 GNPYPG 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVH 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN+
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 148 YSRA--SQRMPLIYVKLYT---------------YQICRALAYIHG-GIGV--------C 181
+ ++ P++ + Y + + + + + G G G+
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+LVN + K+ DFG ++VL + +P +Y + APE I +
Sbjct: 139 HRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 195
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G V+ E++
Sbjct: 196 FTSASDVWSYGIVMWEVM 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKV---LQDKRYKN--RELQTMRLLDHPNVH 147
E+V+G G FG V + G+ VAIK + DK+ ++ E M DHPN+
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 148 YSRA--SQRMPLIYVKLYT---------------YQICRALAYIHG-GIGV--------C 181
+ ++ P++ + Y + + + + + G G G+
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+LVN + K+ DFG ++VL + +P +Y + APE I +
Sbjct: 133 HRDLAARNILVNSNL-VCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAPEAI-AYRK 189
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G V+ E++
Sbjct: 190 FTSASDVWSYGIVMWEVM 207
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 162 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 220
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 221 CSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ + APEL+ G EY +VD +++G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 162 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 220
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 221 CSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ + APEL+ G EY +VD +++G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 162 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 220
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 221 CSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ + APEL+ G EY +VD +++G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 108/284 (38%), Gaps = 68/284 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKN-----------RELQTMRLLDHPNV- 146
+G G F IV + + TG+ A K ++ +R + RE+ +R + HPN+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 147 --HYSRASQRMPLIYVKL-----------------------YTYQICRALAYIHGGIGVC 181
H ++ ++ ++L + QI + Y+H +
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK-RIA 137
Query: 182 HRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
H D+KP+N+++ N ++KL DFG A + G + + + APE++
Sbjct: 138 HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV-NYEPLG 196
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQ 298
D+WS+G + LL G F GE+ + L I +N ++ E F
Sbjct: 197 LEADMWSIGVITYILLSGASPFLGETKQETLT------------NISAVNYDFDEEYFSN 244
Query: 299 IKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPF 342
A D + RLL P R ++ H +
Sbjct: 245 -------------TSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 275
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 141 LDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVK 200
LDHP+ RA LI + +QI + + Y+ + + HRD+ +N+LV ++K
Sbjct: 139 LDHPD---ERALTMGDLIS---FAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMK 190
Query: 201 LCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LG 256
+ DFG ++ + + + + R + A E +F YTT D+WS G +L E++ LG
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLG 249
Query: 257 QPLFPG 262
+PG
Sbjct: 250 GNPYPG 255
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 157
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 158 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 214
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 215 FTSASDVWSYGIVLWEVM 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 167
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 168 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 224
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 225 FTSASDVWSYGIVLWEVM 242
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG +VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLGRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 162 LYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI-SYI 220
YT QI L ++H + +RD+KP+N+L++ + V++ D G A L G+ Y
Sbjct: 293 FYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGN-VRISDLGLAVELKAGQTKTKGYA 350
Query: 221 CSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ + APEL+ G EY +VD +++G L E++
Sbjct: 351 GTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI------GVC 181
++ P++ V + Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 148 YSRA--SQRMPLIYVKLY------------------TYQICRALAYIHGGI------GVC 181
++ P++ V Y Q+ L I G+ G
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 141 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 197
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 198 FTSASDVWSYGIVLWEVM 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYSRASQRMPL 157
+G+GSFG V + K +TG A+KKV + + ++ EL L P V A + P
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV-RLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 138
Query: 158 IYVKL-------------------------YTYQICRALAYIHGGIGVCHRDIKPQNLLV 192
+ + + Y Q L Y+H + H D+K N+L+
Sbjct: 139 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR-ILHGDVKADNVLL 197
Query: 193 NPHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEYTTAVDIWSV 246
+ + LCDFG A L S + Y + APE++ G VDIWS
Sbjct: 198 SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSS 256
Query: 247 GCVLAELLLG 256
C++ +L G
Sbjct: 257 CCMMLHMLNG 266
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 33/189 (17%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPN-VHYSRASQRMPL 157
+G+GSFG V + + +TG A+KKV + + ++ EL L P V A + P
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV-RLEVFRAEELMACAGLTSPRIVPLYGAVREGPW 140
Query: 158 IYV-----------KLYTYQIC----RALAYIHGGIG---------VCHRDIKPQNLLVN 193
+ + +L Q C RAL Y+ + + H D+K N+L++
Sbjct: 141 VNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
Query: 194 PHTHQVKLCDFGSAKVLVKGEPNISYICSRY------YRAPELIFGATEYTTAVDIWSVG 247
LCDFG A L + Y + APE++ G + VD+WS
Sbjct: 201 SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSC 259
Query: 248 CVLAELLLG 256
C++ +L G
Sbjct: 260 CMMLHMLNG 268
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 141 LDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVK 200
LDHP+ RA LI + +QI + + Y+ + + HRD+ +N+LV ++K
Sbjct: 139 LDHPD---ERALTMGDLIS---FAWQISQGMQYL-AEMKLVHRDLAARNILV-AEGRKMK 190
Query: 201 LCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LG 256
+ DFG ++ + + + + R + A E +F YTT D+WS G +L E++ LG
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLG 249
Query: 257 QPLFPG 262
+PG
Sbjct: 250 GNPYPG 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE-------PNIS 218
QI A+ ++H G+ HRD+KP N+ VK+ DFG + + E P +
Sbjct: 172 QIAEAVEFLHSK-GLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 219 Y------ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
Y + ++ Y +PE I G Y+ VDI+S+G +L ELL
Sbjct: 230 YATHXGQVGTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELL 270
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL---------QTMRLLDHPNV 146
+G+G FG+VF+AK AIK++ R NREL + + L+HP +
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGI 66
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 51/202 (25%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 147 --------HYSRASQRMPLIYVKL-------------------YTYQICRALAYIHGGIG 179
S ++ + YV L + QIC +AY+H
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHY 138
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YYRAPELIF 232
+ HR++ +N+L++ + VK+ DFG AK + +G Y R ++ APE +
Sbjct: 139 I-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWYAPECL- 192
Query: 233 GATEYTTAVDIWSVGCVLAELL 254
++ A D+WS G L ELL
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 51/202 (25%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVLQDKRYKNR-----ELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + D ++R E+ +R L H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 147 --------HYSRASQRMPLIYVKL-------------------YTYQICRALAYIHGGIG 179
S ++ + YV L + QIC +AY+H
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHY 138
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YYRAPELIF 232
+ HR++ +N+L++ + VK+ DFG AK + +G Y R ++ APE +
Sbjct: 139 I-HRNLAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWYAPECL- 192
Query: 233 GATEYTTAVDIWSVGCVLAELL 254
++ A D+WS G L ELL
Sbjct: 193 KEYKFYYASDVWSFGVTLYELL 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 181 CHRDIKPQNLLVNPHTHQVKLCDFG--SAKVLVKGEPNISYICSRYYRAPELIFGATEYT 238
HRD+KP+N+LV+ L DFG SA K + + + YY APE F + T
Sbjct: 156 THRDVKPENILVSADDF-AYLVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESHAT 213
Query: 239 TAVDIWSVGCVLAELLLGQPLFPGE 263
DI+++ CVL E L G P + G+
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 31/209 (14%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ QI + Y+H + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ + APE++ D+WS+G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---- 233
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
++ + + F + A D + +LL R T EA
Sbjct: 234 ---------------------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
HP+ + + A + L NF+ Q
Sbjct: 273 HPWITPVDNQQA-MVRRESVVNLENFRKQ 300
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 46/179 (25%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQ--VKLCDFGSAKVLVKGEPNISYICSRY 224
I A+ Y+H I + HRD+KP+NLL +KL DFG AK GE
Sbjct: 126 IGEAIQYLHS-INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE---------- 173
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEI 284
+Y + D+WS+G ++ LL G P F G + G TR +
Sbjct: 174 -----------KYDKSCDMWSLGVIMYILLCGYPPFYSNHG------LAISPGMKTRIRM 216
Query: 285 KCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACIHPFF 343
+++FP + W ++ E L+ LL+ P R T E HP+
Sbjct: 217 -------GQYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 148 YSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI------GVC 181
++ P++ V + Q+ L I G+ G
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 169
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 170 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 226
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 227 FTSASDVWSYGIVLWEVM 244
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 30/183 (16%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ QI + Y+H + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ + APE++ D+WS+G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
++ + + F A D + +LL R T EA
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 340 HPF 342
HP+
Sbjct: 273 HPW 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 42/198 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGE---TVAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
++VVG G FG V + + +VAIK + K R E M DHPN+
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 148 YSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI------GVC 181
++ P++ V + Q+ L I G+ G
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYV 140
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIFGATE 236
HRD+ +N+L+N + K+ DFG ++VL + +P +Y + +PE I +
Sbjct: 141 HRDLAARNILINSNL-VCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSPEAI-AYRK 197
Query: 237 YTTAVDIWSVGCVLAELL 254
+T+A D+WS G VL E++
Sbjct: 198 FTSASDVWSYGIVLWEVM 215
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 31/209 (14%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLV---NPHTHQVKLCDFGSAKVLVKGEPNISY 219
+ QI + Y+H + H D+KP+N+++ N +KL DFG A + G +
Sbjct: 120 FIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 220 ICSRYYRAPELIFGATEYTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTP 279
+ + APE++ D+WS+G + LL G F G++ + L I V
Sbjct: 179 FGTPEFVAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---- 233
Query: 280 TREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEACI 339
++ + + F A D + +LL R T EA
Sbjct: 234 ---------------------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272
Query: 340 HPFFDELRDPNARLPNGRPFPPLFNFKPQ 368
HP+ + + A + L NF+ Q
Sbjct: 273 HPWITPVDNQQA-MVRRESVVNLENFRKQ 300
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 51/204 (25%)
Query: 98 VVGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKNRELQTMRL--LDHPNV-HYSRASQ 153
V +G FG V++A+ L E VA+K +QDK+ E + L + H N+ + A +
Sbjct: 31 VKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 154 RMPLIYVKLYTY---------------------QIC-------RALAYIHGGI------- 178
R + V L+ ++C R LAY+H I
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGH 148
Query: 179 --GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP---NISYICSRYYRAPELIFG 233
+ HRDIK +N+L+ + + DFG A G+ + +R Y APE++ G
Sbjct: 149 KPAISHRDIKSKNVLLKNNLTAC-IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG 207
Query: 234 ATEYTTA----VDIWSVGCVLAEL 253
A + +D++++G VL EL
Sbjct: 208 AINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 42/199 (21%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLLDHPNVH 147
E+V+G G FG V G+ VAIK + K R E M DHPNV
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 148 YSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI------GVC 181
+ ++ P++ + + Q+ L I G+
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYV 157
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYRAPELIFGAT 235
HRD+ +N+LVN + K+ DFG ++ L + +Y + + APE I
Sbjct: 158 HRDLAARNILVNSNL-VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-QYR 215
Query: 236 EYTTAVDIWSVGCVLAELL 254
++T+A D+WS G V+ E++
Sbjct: 216 KFTSASDVWSYGIVMWEVM 234
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 51/202 (25%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 147 --------HYSRASQRMPLIYVKL-------------------YTYQICRALAYIHGGIG 179
S ++ + YV L + QIC +AY+H
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 133
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YYRAPELIF 232
+ HR + +N+L++ + VK+ DFG AK + +G Y R ++ APE +
Sbjct: 134 I-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWYAPECL- 187
Query: 233 GATEYTTAVDIWSVGCVLAELL 254
++ A D+WS G L ELL
Sbjct: 188 KECKFYYASDVWSFGVTLYELL 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 142 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 147 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 51/202 (25%)
Query: 97 RVVGQGSFGIVFQAKCLE-----TGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV 146
R +G+G FG V C + TGE VA+K + Q + RE++ +R L H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 147 --------HYSRASQRMPLIYVKL-------------------YTYQICRALAYIHGGIG 179
S ++ + YV L + QIC +AY+H
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHY 132
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-------YYRAPELIF 232
+ HR + +N+L++ + VK+ DFG AK + +G Y R ++ APE +
Sbjct: 133 I-HRALAARNVLLD-NDRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPVFWYAPECL- 186
Query: 233 GATEYTTAVDIWSVGCVLAELL 254
++ A D+WS G L ELL
Sbjct: 187 KECKFYYASDVWSFGVTLYELL 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 43/205 (20%)
Query: 91 ISYMA-ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 141
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 142 DHPNVHYSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI--- 178
+HPN+ + MP++ + + Q+ L I G+
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 179 ---GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYRAPE 229
HRD+ +N+LVN + K+ DFG ++ L + + +Y S + APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 230 LIFGATEYTTAVDIWSVGCVLAELL 254
I ++T+A D WS G V+ E++
Sbjct: 192 AI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 44/209 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ--------------- 136
++ + ++G+G FG V++ + L G VA+K+ L+++R + ELQ
Sbjct: 31 NFXNKNILGRGGFGKVYKGR-LADGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 137 -----------TMRLLDHPNVH--------YSRASQRMPLIYVKLYTYQI--CRALAYIH 175
T RLL +P + R + PL + K + R LAY+H
Sbjct: 89 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148
Query: 176 GGIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--YRAPELI 231
+ HRD+K N+L++ V + DFG AK++ + ++ + APE +
Sbjct: 149 DHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYL 207
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLF 260
+ + D++ G +L EL+ GQ F
Sbjct: 208 -STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 100 GQGSFGIVFQAKCLETGETVAIKKVL--------QDKRYKNRELQTMRLLDHPNV----H 147
G+G FG+V++ T TVA+KK+ + K+ ++E++ H N+
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 148 YSRASQRMPLIYVK------------------LYTYQICRALAYIHGGIGV------CHR 183
+S + L+YV L + C+ GI HR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 184 DIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATEYTTA 240
DIK N+L++ K+ DFG A+ K + + + Y APE + G E T
Sbjct: 149 DIKSANILLD-EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG--EITPK 205
Query: 241 VDIWSVGCVLAELLLGQP 258
DI+S G VL E++ G P
Sbjct: 206 SDIYSFGVVLLEIITGLP 223
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 44/209 (21%)
Query: 92 SYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQ--------------- 136
++ + ++G+G FG V++ + L G VA+K+ L+++R + ELQ
Sbjct: 39 NFSNKNILGRGGFGKVYKGR-LADGTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 137 -----------TMRLLDHPNVH--------YSRASQRMPLIYVKLYTYQI--CRALAYIH 175
T RLL +P + R + PL + K + R LAY+H
Sbjct: 97 LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 156
Query: 176 GGIG--VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY--YRAPELI 231
+ HRD+K N+L++ V + DFG AK++ + ++ + APE +
Sbjct: 157 DHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYL 215
Query: 232 FGATEYTTAVDIWSVGCVLAELLLGQPLF 260
+ + D++ G +L EL+ GQ F
Sbjct: 216 -STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 167 ICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR--- 223
I + Y+ + HRD+ +N+LVN + K+ DFG ++VL + +P +Y S
Sbjct: 156 IAAGMKYL-ANMNYVHRDLAARNILVNSNL-VCKVSDFGLSRVL-EDDPEATYTTSGGKI 212
Query: 224 --YYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ APE I ++T+A D+WS G V+ E++
Sbjct: 213 PIRWTAPEAI-SYRKFTSASDVWSFGIVMWEVM 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 142
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 143 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 106 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 164
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 165 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 222
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 223 HQSDVWSYGVTVWELM 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 142
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 143 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 165 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 223 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 163 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 220
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 221 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 129 RYKNRELQTMRLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQ 188
R K+R L+T N S AS R L ++ Q+ + +A++ HRD+ +
Sbjct: 142 RRKSRVLETDPAFAIAN---STASTRDLL----HFSSQVAQGMAFL-ASKNCIHRDVAAR 193
Query: 189 NLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYTTAVDIWS 245
N+L+ + H K+ DFG A+ ++ I +R + APE IF YT D+WS
Sbjct: 194 NVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-YTVQSDVWS 251
Query: 246 VGCVLAELL-LGQPLFPG 262
G +L E+ LG +PG
Sbjct: 252 YGILLWEIFSLGLNPYPG 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 84 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 142
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 143 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 157 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 215 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 171 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 229 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 91 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 149
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 150 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 207
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 208 HQSDVWSYGVTVWELM 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 83 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 142 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 87 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 145
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 146 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 203
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 204 HQSDVWSYGVTVWELM 219
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 163 YTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICS 222
++ Q+ + +A++ HRD+ +N+L+ + H K+ DFG A+ ++ I +
Sbjct: 169 FSSQVAQGMAFL-ASKNCIHRDVAARNVLLT-NGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 223 RY---YRAPELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPG 262
R + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 227 RLPVKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 147 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNV- 146
+V+G G+FG V++ + GETV I K+L + ++ M +DHP++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV + QI + + Y+ +
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLV 162
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG A++L E + + + A E I ++T
Sbjct: 163 HRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH-YRKFT 220
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 221 HQSDVWSYGVTIWELM 236
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIF 232
+G HRD+ +N+LV+ + K+ DFG ++VL + +P+ +Y + + APE I
Sbjct: 170 LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 233 GATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
T +++A D+WS G V+ E+L G+ + + D + + E + P
Sbjct: 228 FRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGYRLPAPMG 278
Query: 292 TEFKFPQIKAHPWHKIFHKR-MPPEAVDLVSRLLQYSPNLRCTA 334
Q+ WHK +R + V ++ L++ +LR TA
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNRELQ------TMRLLDHPNV- 146
+V+G G+FG V++ + GETV I K+L + ++ M +DHP++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV + QI + + Y+ +
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG A++L E + + + A E I ++T
Sbjct: 140 HRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH-YRKFT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTIWELM 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----H 147
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 71
Query: 148 YSRASQ----------------------RMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
YS A Q + +I + Q + + Y+H + HRD+
Sbjct: 72 YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 131 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 75 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 133
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 134 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 191
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 192 HQSDVWSYGVTVWELM 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I + + R N+E+ M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 115 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 173
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 174 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 231
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 232 HQSDVWSYGVTVWELM 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 142 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 142 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 43/197 (21%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDH---- 143
+V+G G FG V + + GE++ I KV++DK + + + LDH
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 144 ------PNVHYSRASQRMPL----IYVKL------------YTYQICRALAYIHGGIGVC 181
P +Q +PL +V+ + QI + + Y+ G+
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH-GMV 155
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI-FGATEY 237
HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A E I FG +Y
Sbjct: 156 HRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--KY 212
Query: 238 TTAVDIWSVGCVLAELL 254
T D+WS G + EL+
Sbjct: 213 THQSDVWSYGVTVWELM 229
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 144 HRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 201
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 202 HQSDVWSYGVTVWELM 217
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 140
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 141 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 198
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 199 HQSDVWSYGVTVWELM 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 84 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 142
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 143 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 200
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 201 HQSDVWSYGVTVWELM 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 85 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 143
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 144 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 201
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 202 HQSDVWSYGVTVWELM 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + Y+ +
Sbjct: 78 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR-RLV 136
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 137 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 194
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 195 HQSDVWSYGVTVWELM 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 88/197 (44%), Gaps = 43/197 (21%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIK---KVLQDKRYKNR------ELQTMRLLDH---- 143
+V+G G FG V + + GE++ I KV++DK + + + LDH
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 144 ------PNVHYSRASQRMPL----IYVKL------------YTYQICRALAYIHGGIGVC 181
P +Q +PL +V+ + QI + + Y+ G+
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH-GMV 137
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELI-FGATEY 237
HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A E I FG +Y
Sbjct: 138 HRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG--KY 194
Query: 238 TTAVDIWSVGCVLAELL 254
T D+WS G + EL+
Sbjct: 195 THQSDVWSYGVTVWELM 211
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 82 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 140
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 141 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 198
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 199 HQSDVWSYGVTVWELM 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 83 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 142 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+G G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 43 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 98
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 99 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 157
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 158 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 99
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 158
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 159 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNV-------HYS 149
+V+G G+FG V++ + GE V I ++ R +LD V + S
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 150 R------------ASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
R +Q MP L +V+ + QI + ++Y+ + +
Sbjct: 83 RLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-VRLV 141
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG A++L E + + A E I +T
Sbjct: 142 HRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL-RRRFT 199
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 200 HQSDVWSYGVTVWELM 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 76
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 135
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 136 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 18 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 73
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 74 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 132
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 133 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 76
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 77 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 135
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 136 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY---ICSRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A V + + + S + APE+I + Y+
Sbjct: 131 KSNNIFLHEDL-TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 36 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 91
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 92 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 150
Query: 186 KPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A K G + S + APE+I + Y+
Sbjct: 151 KSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 88 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 147 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
+Q MP L YV+ + QI + + Y+ +
Sbjct: 81 RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 139
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 140 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 197
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 198 HQSDVWSYGVTVWELM 213
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 99
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 100 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 158
Query: 186 KPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A K G + S + APE+I + Y+
Sbjct: 159 KSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 43/205 (20%)
Query: 91 ISYMA-ERVVGQGSFGIVFQAKCLETGET---VAIKKVLQDKRYKNR-----ELQTMRLL 141
+SY+ E V+G G FG V + + G+ VAIK + + R E M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 142 DHPNVHYSRA--SQRMPLIYV------------------KLYTYQICRALAYIHGGI--- 178
+HPN+ + MP++ + + Q+ L I G+
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 179 ---GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR------YYRAPE 229
HRD+ +N+LVN + K+ DFG ++ L + + + S + APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNL-VCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 230 LIFGATEYTTAVDIWSVGCVLAELL 254
I ++T+A D WS G V+ E++
Sbjct: 194 AI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 90/213 (42%), Gaps = 44/213 (20%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-------LQDKRYKNRELQTMRLLDHPNV----- 146
+G GSFG V++ K G+ VA+K + Q + +KN E+ +R H N+
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMG 71
Query: 147 ---------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDI 185
H + +I + Q + + Y+H + HRD+
Sbjct: 72 YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDL 130
Query: 186 KPQNLLVNPHTHQVKLCDFGSA--KVLVKGEPNISYIC-SRYYRAPELIFGATE--YTTA 240
K N+ ++ VK+ DFG A K G + S + APE+I + Y+
Sbjct: 131 KSNNIFLHEDL-TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 241 VDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
D+++ G VL EL+ GQ + + DQ++ ++
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 122/306 (39%), Gaps = 87/306 (28%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISYICSRYYRA 227
+AY++ V HRD+ +N +V H VK+ DFG + + + + + + A
Sbjct: 143 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
PE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 201 PESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV------------- 245
Query: 287 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC------IH 340
M+ Y + P P DL+ Q++PN+R T LE +H
Sbjct: 246 MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 291
Query: 341 PFFDEL 346
P F E+
Sbjct: 292 PSFPEV 297
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 178 IGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSR-----YYRAPELIF 232
+G HRD+ +N+LV+ + K+ DFG ++VL + +P+ + + + APE I
Sbjct: 170 LGYVHRDLAARNVLVDSNL-VCKVSDFGLSRVL-EDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 233 GATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY 291
T +++A D+WS G V+ E+L G+ + + D + + E + P
Sbjct: 228 FRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--------EEGYRLPAPMG 278
Query: 292 TEFKFPQIKAHPWHKIFHKR-MPPEAVDLVSRLLQYSPNLRCTA 334
Q+ WHK +R + V ++ L++ +LR TA
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATA 322
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 130/346 (37%), Gaps = 76/346 (21%)
Query: 98 VVGQG--SFGIVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV--- 146
V+G+G V A+ TGE V ++++ + + EL +L +HPN+
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
H+ + + Y+ + +AL YIH +
Sbjct: 76 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIHH-M 131
Query: 179 GVCHRDIKPQNLLVNPH--------THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
G HR +K ++L++ + + G + +V P S + + +PE+
Sbjct: 132 GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS-VKVLPWLSPEV 190
Query: 231 IFGATE-YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT--RE 282
+ + Y DI+SVG EL G F L+E + +L T T E
Sbjct: 191 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 250
Query: 283 EIKCMNPN------------YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
E+ M+P+ T P P H +H+ P V + LQ +P+
Sbjct: 251 EL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP-YHRTFSPHFHHFVEQCLQRNPDA 308
Query: 331 RCTALEACIHPFFDEL-RDPNARLPN-GRPFPPLFNFKPQELKGAS 374
R +A H FF ++ R + LP RP P+ NF+ + + S
Sbjct: 309 RPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 354
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 130/346 (37%), Gaps = 76/346 (21%)
Query: 98 VVGQG--SFGIVFQAKCLETGETVAIKKVLQDK------RYKNRELQTMRLLDHPNV--- 146
V+G+G V A+ TGE V ++++ + + EL +L +HPN+
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
H+ + + Y+ + +AL YIH +
Sbjct: 92 RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIHH-M 147
Query: 179 GVCHRDIKPQNLLVNPH--------THQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
G HR +K ++L++ + + G + +V P S + + +PE+
Sbjct: 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYS-VKVLPWLSPEV 206
Query: 231 IFGATE-YTTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIK-----VLGTPT--RE 282
+ + Y DI+SVG EL G F L+E + +L T T E
Sbjct: 207 LQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAE 266
Query: 283 EIKCMNPN------------YTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNL 330
E+ M+P+ T P P H +H+ P V + LQ +P+
Sbjct: 267 EL-TMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP-YHRTFSPHFHHFVEQCLQRNPDA 324
Query: 331 RCTALEACIHPFFDEL-RDPNARLPN-GRPFPPLFNFKPQELKGAS 374
R +A H FF ++ R + LP RP P+ NF+ + + S
Sbjct: 325 RPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHS 370
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 36/156 (23%)
Query: 86 QPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNREL----QTMRLL 141
+P+ + R +G GSFG ++ ++T E VAIK L++ + K+ +L + R+L
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRIL 59
Query: 142 DH----PNVHY-----------------------SRASQRMPLIYVKLYTYQICRALAYI 174
PNV + + S+++ L V + Q+ + ++
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFV 119
Query: 175 HGGIGVCHRDIKPQNLL--VNPHTHQVKLCDFGSAK 208
H HRDIKP N L + +QV + DFG AK
Sbjct: 120 HSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 41/196 (20%)
Query: 97 RVVGQGSFGIVFQAKCLETGETVAIKKVLQDKR-----YKNREL----QTMRLLDHPNV- 146
+V+ G+FG V++ + GE V I +++ R N+E+ M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 147 ---------HYSRASQRMP----LIYVKL------------YTYQICRALAYIHGGIGVC 181
Q MP L YV+ + QI + + Y+ +
Sbjct: 88 RLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLV 146
Query: 182 HRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY---YRAPELIFGATEYT 238
HRD+ +N+LV H VK+ DFG AK+L E + + A E I YT
Sbjct: 147 HRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI-YT 204
Query: 239 TAVDIWSVGCVLAELL 254
D+WS G + EL+
Sbjct: 205 HQSDVWSYGVTVWELM 220
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 48/209 (22%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYKN----------RELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NV-----------------------HYSRASQRMPLIY-VKL-YTYQICRALAYIHG-GI 178
N+ ++ + P+ + VKL I + Y+
Sbjct: 84 NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYICSRY-YRAPELIFG 233
+ HRD++ N+ + +C DFG+++ V ++S + + + APE I G
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH---SVSGLLGNFQWMAPETI-G 199
Query: 234 ATE--YTTAVDIWSVGCVLAELLLGQPLF 260
A E YT D +S +L +L G+ F
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 40/216 (18%)
Query: 94 MAERVVGQGSFGIVFQAKCLETGETVAIKKVL-----QDKRYKNRELQTMRLLDHPNV-- 146
M +G GSFG V++ K V I KV+ Q + ++N E+ +R H N+
Sbjct: 39 MLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNILL 96
Query: 147 --------------HYSRASQRMPLIYVKLYTYQI----------CRALAYIHGGIGVCH 182
+ S ++V+ +Q+ + + Y+H + H
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK-NIIH 155
Query: 183 RDIKPQNLLVNPHTHQVKLCDFGSAKVLVK--GEPNISY-ICSRYYRAPELIFGATE--Y 237
RD+K N+ ++ VK+ DFG A V + G + S + APE+I +
Sbjct: 156 RDMKSNNIFLHEGL-TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 238 TTAVDIWSVGCVLAELLLGQPLFPGESGVDQLVEII 273
+ D++S G VL EL+ G+ + + DQ++ ++
Sbjct: 215 SFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA--VDLVSRLLQ 325
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 326 YSPNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 105/315 (33%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HR++ +N +V H VK+ DFG + + + + YYR
Sbjct: 143 MAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYETD---------YYRKGGK 191
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 277
APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 192 GLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV---- 245
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
M+ Y + P P DL+ Q++PN+R T LE
Sbjct: 246 ---------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEI 282
Query: 338 C------IHPFFDEL 346
+HP F E+
Sbjct: 283 VNLLKDDLHPSFPEV 297
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 105/315 (33%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HR++ +N +V H VK+ DFG + + + + YYR
Sbjct: 144 MAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYETD---------YYRKGGK 192
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 277
APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 193 GLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV---- 246
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
M+ Y + P P DL+ Q++PN+R T LE
Sbjct: 247 ---------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEI 283
Query: 338 C------IHPFFDEL 346
+HP F E+
Sbjct: 284 VNLLKDDLHPSFPEV 298
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEA--VDLVSRLLQ 325
Q++ I L ++PN+ E +FP I PE D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDI--------------PEKDLQDVLKCCLK 306
Query: 326 YSPNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 307 RDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 158 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 214
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ F
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF------Q 268
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q++ I L ++PN+ E +FP I + D++ L+
Sbjct: 269 QIINQISKLHA-------IIDPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 308
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 309 PKQRISIPELLAHPYVQIQTHPVNQMAKG 337
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 186
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 280
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 281 PKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 111 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 167
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 225
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 226 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 261
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 262 PKQRISIPELLAHPYVQIQTHPVNQMAKG 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 122/315 (38%), Gaps = 105/315 (33%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V H VK+ DFG + + + + YYR
Sbjct: 143 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYETD---------YYRKGGK 191
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 277
APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 192 GLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV---- 245
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
M+ Y + P P DL+ Q++P +R T LE
Sbjct: 246 ---------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 338 C------IHPFFDEL 346
+HP F E+
Sbjct: 283 VNLLKDDLHPSFPEV 297
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 122/315 (38%), Gaps = 105/315 (33%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V H VK+ DFG + + + + YYR
Sbjct: 142 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYYRKGGK 190
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 277
APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 191 GLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV---- 244
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
M+ Y + P P DL+ Q++P +R T LE
Sbjct: 245 ---------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEI 281
Query: 338 C------IHPFFDEL 346
+HP F E+
Sbjct: 282 VNLLKDDLHPSFPEV 296
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 122/315 (38%), Gaps = 105/315 (33%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V H VK+ DFG + + + + YYR
Sbjct: 143 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TAYYRKGGK 191
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLG 277
APE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 192 GLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV---- 245
Query: 278 TPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEA 337
M+ Y + P P DL+ Q++P +R T LE
Sbjct: 246 ---------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEI 282
Query: 338 C------IHPFFDEL 346
+HP F E+
Sbjct: 283 VNLLKDDLHPSFPEV 297
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 121/306 (39%), Gaps = 87/306 (28%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISYICSRYYRA 227
+AY++ V HRD+ +N +V H VK+ DFG + + + + + + A
Sbjct: 140 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
PE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 198 PESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV------------- 242
Query: 287 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC------IH 340
M+ Y + P P DL+ Q++P +R T LE +H
Sbjct: 243 MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 288
Query: 341 PFFDEL 346
P F E+
Sbjct: 289 PSFPEV 294
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 121/306 (39%), Gaps = 87/306 (28%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGET---VAIKKVLQDKRYKNR------------------ 133
R +GQGSFG+V++ A+ + GE VA+K V + + R
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 134 ------------ELQTMRLLDHPNV-HYSRASQ--------RMPLIYVKL--YTYQICRA 170
L M L+ H ++ Y R+ + R P ++ +I
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGE---PNISYICSRYYRA 227
+AY++ V HRD+ +N +V H VK+ DFG + + + + + + A
Sbjct: 143 MAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 228 PELIFGATEYTTAVDIWSVGCVLAELL-LGQPLFPGESGVDQLVEIIKVLGTPTREEIKC 286
PE + +TT+ D+WS G VL E+ L + + G S +Q+++ +
Sbjct: 201 PESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLKFV------------- 245
Query: 287 MNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAC------IH 340
M+ Y + P P DL+ Q++P +R T LE +H
Sbjct: 246 MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
Query: 341 PFFDEL 346
P F E+
Sbjct: 292 PSFPEV 297
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 114 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV--DGMLKLIDFGIANQMQPDTTSVVKD 170
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 228
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 229 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 264
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 265 PKQRISIPELLAHPYVQIQTHPVNQMAKG 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 48/209 (22%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYKN----------RELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NV-----------------------HYSRASQRMPLIY-VKL-YTYQICRALAYIHG-GI 178
N+ ++ + P+ + VKL I + Y+
Sbjct: 84 NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYICSRY-YRAPELIFG 233
+ HRD++ N+ + +C DFG ++ V ++S + + + APE I G
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH---SVSGLLGNFQWMAPETI-G 199
Query: 234 ATE--YTTAVDIWSVGCVLAELLLGQPLF 260
A E YT D +S +L +L G+ F
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 84/209 (40%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + ++
Sbjct: 110 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDTTSVVKD 166
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 224
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 225 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 260
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 261 PKQRISIPELLAHPYVQIQTHPVNQMAKG 289
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 60/208 (28%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNV--------- 146
VG+G +G V++ L GE+VA+K + ++ E+ LL H N+
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMT 73
Query: 147 ------------HYSRAS------QRM---PLIYVKLYTYQICRALAYIH-------GGI 178
HY QR P + ++L C LA++H G
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAAC-GLAHLHVEIFGTQGKP 132
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP-----NISYICSRYYRAPELI-- 231
+ HRD K +N+LV + Q + D G A + +G N + ++ Y APE++
Sbjct: 133 AIAHRDFKSRNVLVKSNL-QCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 232 ------FGATEYTTAVDIWSVGCVLAEL 253
F + ++T DIW+ G VL E+
Sbjct: 192 QIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 83/209 (39%), Gaps = 42/209 (20%)
Query: 161 KLYTYQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNI--- 217
K Y + A+ IH G+ H D+KP N L+ +KL DFG A + +
Sbjct: 130 KSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVDGM--LKLIDFGIANQMQPDXXXVVKD 186
Query: 218 SYICSRYYRAPELIFGATE----------YTTAVDIWSVGCVLAELLLGQPLFPGESGVD 267
S + + Y PE I + + D+WS+GC+L + G+ P + ++
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIIN 244
Query: 268 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYS 327
Q+ ++ ++ +PN+ E +FP I + D++ L+
Sbjct: 245 QISKLHAII-----------DPNH-EIEFPDIPE------------KDLQDVLKCCLKRD 280
Query: 328 PNLRCTALEACIHPFFDELRDPNARLPNG 356
P R + E HP+ P ++ G
Sbjct: 281 PKQRISIPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 45 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 163
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 164 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 217
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 218 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 269
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 270 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 111/280 (39%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ Y+ HRD+ +N +++ VK+ DFG A+ + E + + ++
Sbjct: 145 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKW 202
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 203 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 252
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 253 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 34/148 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----------LQDKRYK----------- 131
Y R +G GSFG ++ + +GE VAIK ++ K YK
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSI 70
Query: 132 -------NRELQTMRLLDHPNVH--YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + M LL P++ ++ S++ L V L Q+ + YIH H
Sbjct: 71 KWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIH 128
Query: 183 RDIKPQNLL--VNPHTHQVKLCDFGSAK 208
RD+KP N L + + V + DFG AK
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ ++ E + + + ++
Sbjct: 147 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKW 204
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 205 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 254
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 255 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 19 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 137
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 138 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 191
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 192 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 243
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 244 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 146 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 199
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 251
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 46 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 164
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 165 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 218
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 219 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 270
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 271 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 24 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 143 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 196
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 197 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 248
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 249 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 144 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 197
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 198 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 249
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 250 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 146 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 199
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 200 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 251
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 252 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 145 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 198
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 199 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 250
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 251 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 62/282 (21%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 22 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N +++ VK+ DFG A+ + E Y +L
Sbjct: 141 MKYL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKE----YYSVHNKTGAKL 194
Query: 231 --------IFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTR 281
++TT D+WS G +L EL+ G P +P + D V ++
Sbjct: 195 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-------- 246
Query: 282 EEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + + P Y ++ WH M P +LVSR+
Sbjct: 247 QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 79/192 (41%), Gaps = 45/192 (23%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKV-LQDKRYKNRELQ-------TMRLLDHPNV---- 146
+G+GSF V+ K L+T TV + LQD++ E Q ++ L HPN+
Sbjct: 34 IGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 147 --------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGIG- 179
Y + + + ++ + QI + L ++H
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPP 151
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTT 239
+ HRD+K N+ + T VK+ D G A L + + I + + APE +Y
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EEKYDE 208
Query: 240 AVDIWSVG-CVL 250
+VD+++ G C L
Sbjct: 209 SVDVYAFGXCXL 220
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 52/204 (25%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNV-------HY 148
VG+G +G V++ GE VA+K + ++ EL +L H N+
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 149 SR-ASQRMPLI-----------YVKLYTYQ----------ICRALAYIH-------GGIG 179
SR +S ++ LI Y++L T I LA++H G
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-----ICSRYYRAPELI--- 231
+ HRD+K +N+LV + Q + D G A + + + + ++ Y APE++
Sbjct: 134 IAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 232 --FGATEYTTAVDIWSVGCVLAEL 253
+ VDIW+ G VL E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 52/204 (25%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNV-------HY 148
VG+G +G V++ GE VA+K + ++ EL +L H N+
Sbjct: 45 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 102
Query: 149 SR-ASQRMPLI-----------YVKLYTYQ----------ICRALAYIH-------GGIG 179
SR +S ++ LI Y++L T I LA++H G
Sbjct: 103 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 162
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-----ICSRYYRAPELI--- 231
+ HRD+K +N+LV + Q + D G A + + + + ++ Y APE++
Sbjct: 163 IAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 232 --FGATEYTTAVDIWSVGCVLAEL 253
+ VDIW+ G VL E+
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 146 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 204 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 253
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 254 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 52/204 (25%)
Query: 99 VGQGSFGIVFQAKCLETGETVAIKKVL---QDKRYKNRELQTMRLLDHPNV-------HY 148
VG+G +G V++ GE VA+K + ++ EL +L H N+
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMT 73
Query: 149 SR-ASQRMPLI-----------YVKLYTYQ----------ICRALAYIH-------GGIG 179
SR +S ++ LI Y++L T I LA++H G
Sbjct: 74 SRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 180 VCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY-----ICSRYYRAPELI--- 231
+ HRD+K +N+LV + Q + D G A + + + + ++ Y APE++
Sbjct: 134 IAHRDLKSKNILVKKNG-QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 232 --FGATEYTTAVDIWSVGCVLAEL 253
+ VDIW+ G VL E+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 86 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 144
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 204
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 205 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 263 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 312
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 313 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 48/209 (22%)
Query: 96 ERVVGQGSFGIVFQAKCLETGETVAIKK-VLQDKRYKN----------RELQTMRLLDHP 144
E+ +G+G FG+V + + ++ VAIK +L D + RE+ M L+HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 145 NV-----------------------HYSRASQRMPLIY-VKL-YTYQICRALAYIHG-GI 178
N+ ++ + P+ + VKL I + Y+
Sbjct: 84 NIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143
Query: 179 GVCHRDIKPQNLLVNPHTHQVKLC----DFGSAKVLVKGEPNISYICSRY-YRAPELIFG 233
+ HRD++ N+ + +C DF ++ V ++S + + + APE I G
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH---SVSGLLGNFQWMAPETI-G 199
Query: 234 ATE--YTTAVDIWSVGCVLAELLLGQPLF 260
A E YT D +S +L +L G+ F
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 144 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 201
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 202 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 251
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 252 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 146
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 147 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 204
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 205 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 254
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 255 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 146 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 203
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 204 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 253
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 254 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 112/280 (40%), Gaps = 58/280 (20%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKCLET-GETV--AIKKV--LQDKRYKNRELQ---TM 138
P I + E V+G+G FG V+ L+ G+ + A+K + + D ++ L M
Sbjct: 32 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 90
Query: 139 RLLDHPNVHY-------SRASQRMPLIYVKL---------------------YTYQICRA 170
+ HPNV S S + L Y+K + Q+ +
Sbjct: 91 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 150
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISY------ICSRY 224
+ ++ HRD+ +N +++ VK+ DFG A+ + E + + + ++
Sbjct: 151 MKFL-ASKKFVHRDLAARNCMLD-EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 208
Query: 225 YRAPELIFGATEYTTAVDIWSVGCVLAELLL-GQPLFPGESGVDQLVEIIKVLGTPTREE 283
L ++TT D+WS G +L EL+ G P +P + D V ++ +
Sbjct: 209 MALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--------QG 258
Query: 284 IKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRL 323
+ + P Y ++ WH M P +LVSR+
Sbjct: 259 RRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 34/148 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----------LQDKRYK----------- 131
Y R +G GSFG ++ + GE VAIK ++ K YK
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70
Query: 132 -------NRELQTMRLLDHPNVH--YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + M LL P++ ++ S++ L V L Q+ + YIH H
Sbjct: 71 RWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIH 128
Query: 183 RDIKPQNLL--VNPHTHQVKLCDFGSAK 208
RD+KP N L + + V + DFG AK
Sbjct: 129 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 34/148 (22%)
Query: 93 YMAERVVGQGSFGIVFQAKCLETGETVAIKKV----------LQDKRYK----------- 131
Y R +G GSFG ++ + GE VAIK ++ K YK
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 68
Query: 132 -------NRELQTMRLLDHPNVH--YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCH 182
+ + M LL P++ ++ S++ L V L Q+ + YIH H
Sbjct: 69 RWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIH 126
Query: 183 RDIKPQNLL--VNPHTHQVKLCDFGSAK 208
RD+KP N L + + V + DFG AK
Sbjct: 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 24/101 (23%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 225
Q+ +AY+ V HRD+ +N LV VK+ DFG ++ + + YY
Sbjct: 182 QVAAGMAYLSERKFV-HRDLATRNCLVG-ENMVVKIADFGLSRNIYSAD---------YY 230
Query: 226 RA------------PELIFGATEYTTAVDIWSVGCVLAELL 254
+A PE IF YTT D+W+ G VL E+
Sbjct: 231 KADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 87 PKQTISYMAERVVGQGSFGIVFQAKC-----LETGETVAIKKVLQDKRYK-----NRELQ 136
P+ I Y+ R +G+G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 137 TMRLLDHPNV 146
M D+PN+
Sbjct: 103 LMAEFDNPNI 112
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 34/151 (22%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDH----P 144
+ Y R +G+GSFG++F+ L + VAIK D E +T +LL P
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 68
Query: 145 NVHY-----------------------SRASQRMPLIYVKLYTYQICRALAYIHGGIGVC 181
NV+Y ++ + V + Q+ + IH +
Sbjct: 69 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK-SLV 127
Query: 182 HRDIKPQNLLV----NPHTHQVKLCDFGSAK 208
+RDIKP N L+ + + + + + DFG K
Sbjct: 128 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 82/219 (37%), Gaps = 72/219 (32%)
Query: 96 ERVVGQGSFGIVFQAKCL----ETGETVAIKKVLQD-----KRYKNRELQTMRLLDHPNV 146
+R +G+G+FG VF A+C E + + K L+D ++ +RE + + L H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 147 --HYSRASQRMPLIYVKLY-------------------------------------TYQI 167
Y + PLI V Y QI
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 168 CRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRA 227
+ Y+ HRD+ +N LV + VK+ DFG ++ + YYR
Sbjct: 138 AAGMVYL-ASQHFVHRDLATRNCLVGENL-LVKIGDFGMSR---------DVYSTDYYRV 186
Query: 228 ------------PELIFGATEYTTAVDIWSVGCVLAELL 254
PE I ++TT D+WS+G VL E+
Sbjct: 187 GGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIF 224
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 34/151 (22%)
Query: 91 ISYMAERVVGQGSFGIVFQAKCLETGETVAIK--KVLQDKRYKNRELQTMRLLDH----P 144
+ Y R +G+GSFG++F+ L + VAIK D E +T +LL P
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIP 69
Query: 145 NVHY-----------------------SRASQRMPLIYVKLYTYQICRALAYIHGGIGVC 181
NV+Y ++ + V + Q+ + IH +
Sbjct: 70 NVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK-SLV 128
Query: 182 HRDIKPQNLLV----NPHTHQVKLCDFGSAK 208
+RDIKP N L+ + + + + + DFG K
Sbjct: 129 YRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 82/230 (35%), Gaps = 77/230 (33%)
Query: 96 ERVVGQGSFGIVFQAKCLETGET-----VAIKKV----LQDKRYKNRELQTMRLLDHPNV 146
+R +G+G+FG VF A+C T VA+K + L ++ RE + + L H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 147 --HYSRASQRMPLIYVKLY----------------------------------------T 164
Y PLI V Y
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 165 YQICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRY 224
QI + Y+ HRD+ +N LV + VK+ DFG ++ + Y
Sbjct: 140 SQIASGMVYL-ASQHFVHRDLATRNCLVGANL-LVKIGDFGMSR---------DVYSTDY 188
Query: 225 YRA------------PELIFGATEYTTAVDIWSVGCVLAELLL--GQPLF 260
YR PE I ++TT D+WS G +L E+ QP F
Sbjct: 189 YRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWF 237
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 87/222 (39%), Gaps = 72/222 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 151 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 199
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL--LLGQP 258
+PE + +TT D+WS G VL E+ L QP
Sbjct: 200 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 138 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 186
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 187 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 220
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 22 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 142 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 190
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 191 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 144 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 192
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 193 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 226
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 151 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 199
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 200 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 54/207 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 16 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP----NISYICSRYYR 226
+AY++ V HRD+ +N +V VK+ DFG + + + + + R+
Sbjct: 136 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 227 APELIFGATEYTTAVDIWSVGCVLAEL 253
L G +TT D+WS G VL E+
Sbjct: 194 PESLKDGV--FTTYSDVWSFGVVLWEI 218
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 145 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 193
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 194 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 227
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 82/207 (39%), Gaps = 54/207 (26%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEP----NISYICSRYYR 226
+AY++ V HRD+ +N +V VK+ DFG + + + + + R+
Sbjct: 145 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 202
Query: 227 APELIFGATEYTTAVDIWSVGCVLAEL 253
L G +TT D+WS G VL E+
Sbjct: 203 PESLKDGV--FTTYSDVWSFGVVLWEI 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 144 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 192
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 193 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 225
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + + YY
Sbjct: 166 QVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TDYY 214
Query: 226 RA------------PELIFGATEYTTAVDIWSVGCVLAELL 254
R PE I ++TT D+WS G VL E+
Sbjct: 215 RVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 141 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 189
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 190 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 225
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + + YY
Sbjct: 137 QVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYS---------TDYY 185
Query: 226 RA------------PELIFGATEYTTAVDIWSVGCVLAELL 254
R PE I ++TT D+WS G VL E+
Sbjct: 186 RVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 24/101 (23%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYY 225
Q+ + Y+ G+ HRD+ +N LV VK+ DFG ++ + + YY
Sbjct: 143 QVAAGMVYL-AGLHFVHRDLATRNCLVG-QGLVVKIGDFGMSRDIYSTD---------YY 191
Query: 226 RA------------PELIFGATEYTTAVDIWSVGCVLAELL 254
R PE I ++TT D+WS G VL E+
Sbjct: 192 RVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 231
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 84/215 (39%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 53 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N +V VK+ DFG + + + + YYR
Sbjct: 173 MAYLNANKFV-HRDLAARNCMV-AEDFTVKIGDFGMTRDIYETD---------YYRKGGK 221
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 222 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 255
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNV- 146
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN+
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
SR + P + T + +H
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 179 GVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNISYICSR 223
V HRD+ +N+LV + + K+ DFG ++ V VK + + R
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPVR 206
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ L + YTT D+WS G +L E++
Sbjct: 207 WMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNV- 146
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN+
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
SR + P + T + +H
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 179 GVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNISYICSR 223
V HRD+ +N+LV + + K+ DFG ++ V VK + + R
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPVR 196
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ L + YTT D+WS G +L E++
Sbjct: 197 WMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 70/215 (32%)
Query: 97 RVVGQGSFGIVFQ--AKCLETGE---TVAIKKVLQDKRYKNR--ELQTMRLLDHPNVHY- 148
R +GQGSFG+V++ AK + E VAIK V + + R L ++ N H+
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 149 ----SRASQRMP-LIYVKLYTY---------------------------------QICRA 170
SQ P L+ ++L T +I
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYR---- 226
+AY++ V HRD+ +N V VK+ DFG + + + + YYR
Sbjct: 138 MAYLNANKFV-HRDLAARNCXV-AEDFTVKIGDFGMTRDIYE---------TDYYRKGGK 186
Query: 227 --------APELIFGATEYTTAVDIWSVGCVLAEL 253
+PE + +TT D+WS G VL E+
Sbjct: 187 GLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEI 220
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 214
Q+ + Y+H + +RD+KP+N L+ N H + + DFG AK + E
Sbjct: 105 QLLSRMEYVHSK-NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPE 156
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 57/211 (27%)
Query: 96 ERVVGQGSFGIVFQAKCLETG--ETVAIKKVLQ-----DKRYKNRELQTM-RLLDHPNV- 146
+ V+G+G+FG V +A+ + G AIK++ + D R EL+ + +L HPN+
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 147 ----------------------------HYSRASQRMPLIYVKLYTYQICRALAYIHGGI 178
SR + P + T + +H
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 179 GVC------------HRDIKPQNLLVNPHTHQVKLCDFGSAK---VLVKGEPNISYICSR 223
V HR++ +N+LV + + K+ DFG ++ V VK + + R
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGEN-YVAKIADFGLSRGQEVYVK--KTMGRLPVR 203
Query: 224 YYRAPELIFGATEYTTAVDIWSVGCVLAELL 254
+ L + YTT D+WS G +L E++
Sbjct: 204 WMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLVN-PHT---HQVKLCDFGSAKVLVKGE 214
Q+ + Y+H + +RD+KP+N LV P T H + + DFG AK + E
Sbjct: 108 QLITRMEYVHTK-SLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPE 159
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 212
Q+ R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 119 QVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 212
Q+ R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 121 QVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 212
Q+ R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 123 QVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV------NPHTHQVKLCDFGSAKVLVK 212
Q+ R L YIH + + H DIKP N+ + N + + D+ S KV+ K
Sbjct: 121 QVGRGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 82/219 (37%), Gaps = 59/219 (26%)
Query: 97 RVVGQGSFGIVFQAKCLE---TGETVAIKKVLQDKRYKNR------ELQTMRLLDHPNVH 147
+++G+G FG V + + T VA+K + D + E M+ HPNV
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 148 ------YSRASQRMP--------LIYVKLYTY-----------------------QICRA 170
+SQ +P + Y L+TY I
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 171 LAYIHGGIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPEL 230
+ Y+ HRD+ +N ++ V + DFG +K + G+ Y R + P +
Sbjct: 160 MEYLSNR-NFLHRDLAARNCMLRDDM-TVCVADFGLSKKIYSGD---YYRQGRIAKMP-V 213
Query: 231 IFGATE------YTTAVDIWSVGCVLAELLL-GQPLFPG 262
+ A E YT+ D+W+ G + E+ G +PG
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 214
Q+ + Y+H + +RD+KP+N L+ N + + DFG AK + E
Sbjct: 113 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPE 164
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 125 LQDKRYKNRELQTM-RLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
L DK K+ M R Y ++R V + +I L YIH V H
Sbjct: 118 LHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HG 176
Query: 184 DIKPQNLLVN-PHTHQVKLCDFGSA 207
DIK NLL+N + QV L D+G A
Sbjct: 177 DIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 125 LQDKRYKNRELQTM-RLLDHPNVHYSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHR 183
L DK K+ M R Y ++R V + +I L YIH V H
Sbjct: 118 LHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HG 176
Query: 184 DIKPQNLLVN-PHTHQVKLCDFGSA 207
DIK NLL+N + QV L D+G A
Sbjct: 177 DIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 148 YSRASQRMPLIYVKLYTYQICRALAYIHGGIGVCHRDIKPQNLLVN-PHTHQVKLCDFGS 206
Y ++R V + +I L YIH V H DIK NLL+N + QV L D+G
Sbjct: 142 YEANAKRFSRKTVLQLSLRILDILEYIHEHEYV-HGDIKASNLLLNYKNPDQVYLVDYGL 200
Query: 207 A 207
A
Sbjct: 201 A 201
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 214
Q+ + Y+H + +RD+KP+N L+ N + + DF AK + E
Sbjct: 113 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 164
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 166 QICRALAYIHGGIGVCHRDIKPQNLLV----NPHTHQVKLCDFGSAKVLVKGE 214
Q+ + Y+H + +RD+KP+N L+ N + + DF AK + E
Sbjct: 134 QLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE 185
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,884,158
Number of Sequences: 62578
Number of extensions: 507482
Number of successful extensions: 4283
Number of sequences better than 100.0: 932
Number of HSP's better than 100.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 1508
Number of HSP's gapped (non-prelim): 1581
length of query: 395
length of database: 14,973,337
effective HSP length: 101
effective length of query: 294
effective length of database: 8,652,959
effective search space: 2543969946
effective search space used: 2543969946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)