Query 016088
Match_columns 395
No_of_seqs 186 out of 2394
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 07:40:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016088.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016088hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 3.3E-42 1.1E-46 318.7 29.8 340 7-393 3-352 (357)
2 2xve_A Flavin-containing monoo 100.0 7.9E-42 2.7E-46 325.7 31.2 309 8-392 3-340 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 2.6E-42 9E-47 333.6 24.7 361 7-390 8-454 (540)
4 3uox_A Otemo; baeyer-villiger 100.0 1.9E-41 6.6E-46 327.9 25.1 363 6-390 8-463 (545)
5 4ap3_A Steroid monooxygenase; 100.0 5.9E-41 2E-45 324.7 28.4 367 7-390 21-468 (549)
6 1w4x_A Phenylacetone monooxyge 100.0 7E-41 2.4E-45 325.5 26.9 365 6-392 15-465 (542)
7 2gv8_A Monooxygenase; FMO, FAD 100.0 4.2E-39 1.4E-43 306.4 28.1 308 7-392 6-361 (447)
8 3lzw_A Ferredoxin--NADP reduct 100.0 3.6E-38 1.2E-42 288.8 20.6 298 1-394 1-316 (332)
9 2q7v_A Thioredoxin reductase; 100.0 6E-37 2.1E-41 279.8 25.2 287 7-392 8-311 (325)
10 3f8d_A Thioredoxin reductase ( 100.0 3.5E-37 1.2E-41 281.1 23.2 284 7-392 15-316 (323)
11 3fbs_A Oxidoreductase; structu 100.0 2.6E-37 8.7E-42 278.6 22.0 281 8-393 3-292 (297)
12 2q0l_A TRXR, thioredoxin reduc 100.0 5.7E-37 2E-41 278.3 23.4 285 8-392 2-308 (311)
13 3itj_A Thioredoxin reductase 1 100.0 3.5E-37 1.2E-41 282.9 20.6 291 7-393 22-335 (338)
14 2zbw_A Thioredoxin reductase; 100.0 9E-37 3.1E-41 279.9 21.0 296 7-394 5-318 (335)
15 4gcm_A TRXR, thioredoxin reduc 100.0 1.1E-36 3.6E-41 276.6 20.9 289 1-393 2-306 (312)
16 3r9u_A Thioredoxin reductase; 100.0 4.2E-36 1.4E-40 273.0 23.2 290 6-393 3-312 (315)
17 4a5l_A Thioredoxin reductase; 100.0 1.4E-36 4.8E-41 276.1 20.0 291 7-393 4-312 (314)
18 1fl2_A Alkyl hydroperoxide red 100.0 3.1E-36 1E-40 273.3 22.0 286 7-392 1-304 (310)
19 3cty_A Thioredoxin reductase; 100.0 5.2E-36 1.8E-40 272.9 22.2 286 7-394 16-317 (319)
20 3ab1_A Ferredoxin--NADP reduct 100.0 5.4E-36 1.8E-40 277.5 22.6 297 7-394 14-329 (360)
21 2a87_A TRXR, TR, thioredoxin r 100.0 6.2E-36 2.1E-40 274.3 21.8 285 7-392 14-315 (335)
22 4fk1_A Putative thioredoxin re 100.0 5.8E-36 2E-40 270.6 20.7 285 6-393 5-300 (304)
23 1vdc_A NTR, NADPH dependent th 100.0 8.5E-36 2.9E-40 273.2 21.9 286 7-392 8-322 (333)
24 3d1c_A Flavin-containing putat 100.0 1.2E-34 4.1E-39 269.3 25.8 309 7-393 4-339 (369)
25 1trb_A Thioredoxin reductase; 100.0 7.9E-35 2.7E-39 265.2 21.8 289 7-393 5-314 (320)
26 1hyu_A AHPF, alkyl hydroperoxi 100.0 3.6E-34 1.2E-38 276.6 26.2 287 6-392 211-515 (521)
27 4eqs_A Coenzyme A disulfide re 100.0 5E-35 1.7E-39 276.7 16.3 291 9-391 2-311 (437)
28 3oc4_A Oxidoreductase, pyridin 100.0 4.9E-34 1.7E-38 271.8 22.4 285 8-391 3-314 (452)
29 2hqm_A GR, grase, glutathione 100.0 1.5E-34 5E-39 277.2 18.2 308 1-391 5-347 (479)
30 1zmd_A Dihydrolipoyl dehydroge 100.0 2.8E-34 9.7E-39 275.2 19.8 306 6-391 5-345 (474)
31 1mo9_A ORF3; nucleotide bindin 100.0 6.5E-34 2.2E-38 275.3 21.7 304 6-391 42-378 (523)
32 1dxl_A Dihydrolipoamide dehydr 100.0 6.8E-34 2.3E-38 272.4 21.1 307 6-391 5-342 (470)
33 2wpf_A Trypanothione reductase 100.0 4.2E-34 1.5E-38 274.6 19.5 306 7-391 7-355 (495)
34 3urh_A Dihydrolipoyl dehydroge 100.0 1.4E-34 4.9E-39 278.4 15.9 307 7-392 25-364 (491)
35 3l8k_A Dihydrolipoyl dehydroge 100.0 7.4E-34 2.5E-38 271.5 20.4 294 7-391 4-333 (466)
36 2qae_A Lipoamide, dihydrolipoy 100.0 8.4E-34 2.9E-38 271.5 19.8 306 7-391 2-340 (468)
37 2bc0_A NADH oxidase; flavoprot 100.0 5.9E-34 2E-38 273.7 18.8 288 7-391 35-361 (490)
38 1onf_A GR, grase, glutathione 100.0 9.8E-34 3.4E-38 272.7 19.8 299 7-391 2-371 (500)
39 1xdi_A RV3303C-LPDA; reductase 100.0 2.8E-33 9.5E-38 269.8 21.7 309 7-391 2-342 (499)
40 3iwa_A FAD-dependent pyridine 100.0 5.2E-34 1.8E-38 273.2 16.2 297 7-391 3-329 (472)
41 2a8x_A Dihydrolipoyl dehydroge 100.0 1.3E-33 4.3E-38 269.9 18.8 301 7-390 3-333 (464)
42 1ges_A Glutathione reductase; 100.0 1.2E-33 4.1E-38 268.7 18.3 297 7-391 4-328 (450)
43 3ics_A Coenzyme A-disulfide re 100.0 2.4E-34 8.1E-39 282.8 13.8 291 7-390 36-352 (588)
44 4dna_A Probable glutathione re 100.0 1.3E-33 4.4E-38 269.7 18.3 298 7-391 5-331 (463)
45 2r9z_A Glutathione amide reduc 100.0 1E-33 3.4E-38 270.0 17.2 297 7-391 4-327 (463)
46 3lad_A Dihydrolipoamide dehydr 100.0 7.5E-33 2.6E-37 265.5 23.3 306 7-392 3-344 (476)
47 1xhc_A NADH oxidase /nitrite r 100.0 7E-35 2.4E-39 269.6 8.8 275 8-391 9-297 (367)
48 3qfa_A Thioredoxin reductase 1 100.0 2.3E-33 7.9E-38 271.0 19.6 305 6-391 31-380 (519)
49 3ic9_A Dihydrolipoamide dehydr 100.0 5.6E-35 1.9E-39 280.6 8.2 303 7-391 8-338 (492)
50 1ebd_A E3BD, dihydrolipoamide 100.0 4.6E-33 1.6E-37 265.4 21.2 302 7-391 3-333 (455)
51 1ojt_A Surface protein; redox- 100.0 1.6E-32 5.5E-37 263.3 25.1 307 7-391 6-349 (482)
52 1fec_A Trypanothione reductase 100.0 3.2E-33 1.1E-37 268.4 20.0 305 7-391 3-351 (490)
53 3kd9_A Coenzyme A disulfide re 100.0 4.3E-33 1.5E-37 265.2 20.5 284 7-391 3-315 (449)
54 3dk9_A Grase, GR, glutathione 100.0 1.4E-33 4.8E-38 270.6 17.2 299 7-391 20-356 (478)
55 3dgz_A Thioredoxin reductase 2 100.0 1.5E-33 5.2E-38 270.8 17.2 305 6-391 5-352 (488)
56 2eq6_A Pyruvate dehydrogenase 100.0 3.6E-33 1.2E-37 266.4 19.2 297 7-391 6-334 (464)
57 1zk7_A HGII, reductase, mercur 100.0 2.1E-33 7.2E-38 268.6 17.5 302 7-391 4-334 (467)
58 4b1b_A TRXR, thioredoxin reduc 100.0 1.2E-33 4E-38 271.7 15.8 302 7-391 42-384 (542)
59 1v59_A Dihydrolipoamide dehydr 100.0 6.9E-33 2.4E-37 265.9 21.0 306 7-391 5-350 (478)
60 3o0h_A Glutathione reductase; 100.0 3.4E-33 1.2E-37 268.2 18.2 298 7-391 26-351 (484)
61 2gqw_A Ferredoxin reductase; f 100.0 4.5E-33 1.5E-37 261.4 18.2 285 1-392 1-309 (408)
62 3ntd_A FAD-dependent pyridine 100.0 6.8E-34 2.3E-38 278.7 13.2 290 8-391 2-338 (565)
63 3klj_A NAD(FAD)-dependent dehy 100.0 7.1E-35 2.4E-39 270.8 5.8 272 7-392 9-295 (385)
64 2yqu_A 2-oxoglutarate dehydrog 100.0 4.3E-33 1.5E-37 265.6 18.2 302 7-391 1-327 (455)
65 3lxd_A FAD-dependent pyridine 100.0 1.9E-33 6.4E-38 265.1 15.4 285 6-392 8-322 (415)
66 2vdc_G Glutamate synthase [NAD 100.0 1.9E-33 6.5E-38 266.1 13.8 275 6-392 121-443 (456)
67 3dgh_A TRXR-1, thioredoxin red 100.0 9.2E-33 3.2E-37 265.2 18.3 303 6-391 8-352 (483)
68 3ef6_A Toluene 1,2-dioxygenase 100.0 6E-33 2.1E-37 260.8 16.1 282 8-392 3-310 (410)
69 2cdu_A NADPH oxidase; flavoenz 100.0 1.1E-32 3.7E-37 262.7 17.7 290 8-391 1-317 (452)
70 4b63_A L-ornithine N5 monooxyg 100.0 4E-31 1.4E-35 253.9 27.1 342 7-370 39-457 (501)
71 1lvl_A Dihydrolipoamide dehydr 100.0 9.8E-32 3.4E-36 256.1 21.6 296 7-391 5-330 (458)
72 1nhp_A NADH peroxidase; oxidor 100.0 2E-32 6.9E-37 260.4 16.7 287 8-391 1-316 (447)
73 3fg2_P Putative rubredoxin red 100.0 5E-33 1.7E-37 261.1 12.4 283 8-392 2-311 (404)
74 3s5w_A L-ornithine 5-monooxyge 100.0 1.1E-31 3.7E-36 256.8 21.2 331 7-372 30-420 (463)
75 2v3a_A Rubredoxin reductase; a 100.0 4.1E-32 1.4E-36 253.2 16.3 281 7-391 4-306 (384)
76 3cgb_A Pyridine nucleotide-dis 100.0 3.7E-32 1.3E-36 260.6 16.0 288 7-391 36-353 (480)
77 1q1r_A Putidaredoxin reductase 100.0 3E-32 1E-36 257.5 14.3 285 7-392 4-320 (431)
78 4g6h_A Rotenone-insensitive NA 100.0 2.1E-32 7.2E-37 262.3 11.6 300 6-390 41-398 (502)
79 2x8g_A Thioredoxin glutathione 100.0 1.9E-30 6.6E-35 255.4 22.2 303 6-391 106-459 (598)
80 3h8l_A NADH oxidase; membrane 100.0 3.8E-31 1.3E-35 249.0 11.4 284 8-392 2-335 (409)
81 3sx6_A Sulfide-quinone reducta 100.0 5.1E-31 1.7E-35 249.9 10.1 288 7-393 4-344 (437)
82 1lqt_A FPRA; NADP+ derivative, 100.0 6.9E-30 2.4E-34 242.2 14.1 297 7-392 3-386 (456)
83 1cjc_A Protein (adrenodoxin re 100.0 1.3E-29 4.3E-34 240.6 14.6 303 6-392 5-394 (460)
84 3k30_A Histamine dehydrogenase 100.0 6.4E-30 2.2E-34 255.0 10.4 268 6-393 390-675 (690)
85 1m6i_A Programmed cell death p 100.0 4.1E-30 1.4E-34 246.7 8.0 303 6-393 10-354 (493)
86 1gte_A Dihydropyrimidine dehyd 100.0 4.2E-29 1.4E-33 258.2 14.1 277 7-392 187-507 (1025)
87 1o94_A Tmadh, trimethylamine d 100.0 9E-29 3.1E-33 247.6 12.3 277 6-392 388-699 (729)
88 2gag_A Heterotetrameric sarcos 100.0 7.5E-28 2.6E-32 247.2 18.1 281 7-392 128-443 (965)
89 3h28_A Sulfide-quinone reducta 99.9 8.4E-29 2.9E-33 234.3 4.4 284 8-393 3-333 (430)
90 3vrd_B FCCB subunit, flavocyto 99.9 1.5E-27 5E-32 224.0 12.3 284 7-392 2-323 (401)
91 1ps9_A 2,4-dienoyl-COA reducta 99.9 3.5E-27 1.2E-31 234.7 15.6 288 6-388 372-671 (671)
92 3hyw_A Sulfide-quinone reducta 99.9 3.5E-28 1.2E-32 229.8 3.6 291 8-392 3-332 (430)
93 1y56_A Hypothetical protein PH 99.9 2.3E-26 7.8E-31 220.7 11.1 256 7-392 108-376 (493)
94 2ywl_A Thioredoxin reductase r 99.7 6.8E-17 2.3E-21 133.8 9.5 159 188-392 3-170 (180)
95 3fpz_A Thiazole biosynthetic e 99.7 4.1E-20 1.4E-24 168.2 -12.8 150 7-219 65-216 (326)
96 2gqf_A Hypothetical protein HI 99.6 4.8E-16 1.6E-20 144.8 9.7 135 7-152 4-171 (401)
97 2e5v_A L-aspartate oxidase; ar 99.6 3.1E-16 1E-20 149.4 4.7 193 9-226 1-248 (472)
98 3v76_A Flavoprotein; structura 99.4 2.1E-12 7.1E-17 120.7 12.3 133 6-152 26-190 (417)
99 2cul_A Glucose-inhibited divis 99.3 2.2E-12 7.4E-17 111.0 7.9 176 187-393 4-232 (232)
100 2ywl_A Thioredoxin reductase r 99.3 2.4E-11 8.1E-16 100.2 13.8 111 8-153 2-112 (180)
101 3oz2_A Digeranylgeranylglycero 99.3 7.2E-12 2.5E-16 116.6 10.1 134 7-149 4-162 (397)
102 3cgv_A Geranylgeranyl reductas 99.3 1.5E-11 5E-16 114.7 12.0 134 7-149 4-162 (397)
103 2cul_A Glucose-inhibited divis 99.3 1.4E-11 4.8E-16 105.9 10.7 125 7-152 3-128 (232)
104 3nix_A Flavoprotein/dehydrogen 99.3 2.4E-11 8.4E-16 114.2 12.7 135 7-149 5-166 (421)
105 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.2E-11 4.3E-16 119.7 10.4 172 6-217 27-221 (651)
106 2bry_A NEDD9 interacting prote 99.2 7.3E-12 2.5E-16 120.0 7.2 139 6-151 91-232 (497)
107 3fmw_A Oxygenase; mithramycin, 99.2 5E-11 1.7E-15 115.9 12.4 134 7-149 49-207 (570)
108 3rp8_A Flavoprotein monooxygen 99.2 2.4E-11 8.2E-16 113.7 9.8 132 6-151 22-183 (407)
109 2qa1_A PGAE, polyketide oxygen 99.2 6E-11 2.1E-15 113.7 12.5 136 5-149 9-165 (500)
110 3e1t_A Halogenase; flavoprotei 99.2 5.1E-11 1.8E-15 114.8 11.4 142 1-150 1-173 (512)
111 2qa2_A CABE, polyketide oxygen 99.2 8E-11 2.7E-15 112.8 12.2 136 5-149 10-166 (499)
112 2zxi_A TRNA uridine 5-carboxym 99.2 5.9E-11 2E-15 114.5 11.0 169 6-217 26-220 (637)
113 3ihg_A RDME; flavoenzyme, anth 99.2 1.3E-10 4.4E-15 112.7 13.6 134 7-149 5-183 (535)
114 3dje_A Fructosyl amine: oxygen 99.2 1E-10 3.5E-15 110.5 12.3 63 79-153 159-225 (438)
115 2xdo_A TETX2 protein; tetracyc 99.2 1E-10 3.5E-15 109.1 12.1 130 7-151 26-184 (398)
116 1yvv_A Amine oxidase, flavin-c 99.2 8E-11 2.7E-15 107.1 10.9 129 8-149 3-162 (336)
117 2gmh_A Electron transfer flavo 99.2 1.9E-10 6.6E-15 112.2 14.1 141 7-149 35-217 (584)
118 2i0z_A NAD(FAD)-utilizing dehy 99.2 4.8E-11 1.6E-15 113.0 9.6 134 7-151 26-193 (447)
119 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 3.4E-11 1.2E-15 109.9 7.6 128 8-147 2-163 (342)
120 3nlc_A Uncharacterized protein 99.2 2.2E-10 7.4E-15 110.1 13.1 132 7-149 107-277 (549)
121 3alj_A 2-methyl-3-hydroxypyrid 99.2 7.1E-11 2.4E-15 109.4 9.4 125 7-149 11-160 (379)
122 2x3n_A Probable FAD-dependent 99.1 1.2E-10 4.1E-15 108.7 10.2 131 7-149 6-166 (399)
123 2dkh_A 3-hydroxybenzoate hydro 99.1 4.4E-10 1.5E-14 111.0 14.4 140 6-149 31-211 (639)
124 2r0c_A REBC; flavin adenine di 99.1 4.8E-10 1.6E-14 108.8 13.9 133 7-149 26-196 (549)
125 3i3l_A Alkylhalidase CMLS; fla 99.1 3E-10 1E-14 110.7 12.3 135 7-149 23-188 (591)
126 3dme_A Conserved exported prot 99.1 3.6E-10 1.2E-14 104.0 11.7 63 79-150 148-210 (369)
127 3cp8_A TRNA uridine 5-carboxym 99.1 1.2E-10 4.1E-15 112.8 8.7 172 6-217 20-215 (641)
128 1y0p_A Fumarate reductase flav 99.1 7.2E-10 2.4E-14 108.2 14.2 138 7-150 126-318 (571)
129 1k0i_A P-hydroxybenzoate hydro 99.1 1E-10 3.5E-15 108.9 7.8 135 8-151 3-165 (394)
130 1rp0_A ARA6, thiazole biosynth 99.1 8.6E-10 2.9E-14 97.7 12.7 136 7-147 39-189 (284)
131 2vou_A 2,6-dihydroxypyridine h 99.1 1.8E-10 6.1E-15 107.4 8.2 129 7-150 5-154 (397)
132 1qo8_A Flavocytochrome C3 fuma 99.1 1E-09 3.5E-14 107.0 13.5 139 6-150 120-313 (566)
133 2uzz_A N-methyl-L-tryptophan o 99.1 7.1E-10 2.4E-14 102.3 11.8 62 80-154 148-209 (372)
134 1ryi_A Glycine oxidase; flavop 99.1 8.7E-10 3E-14 102.1 12.2 61 77-150 160-220 (382)
135 3atr_A Conserved archaeal prot 99.1 4E-10 1.4E-14 106.9 10.1 136 7-150 6-163 (453)
136 3ps9_A TRNA 5-methylaminomethy 99.1 6.8E-10 2.3E-14 110.6 11.8 60 79-150 415-474 (676)
137 4hb9_A Similarities with proba 99.1 6.1E-10 2.1E-14 104.1 10.8 129 8-150 2-167 (412)
138 3c96_A Flavin-containing monoo 99.0 2E-09 6.8E-14 100.7 14.0 136 7-150 4-170 (410)
139 3jsk_A Cypbp37 protein; octame 99.0 1.2E-09 4E-14 98.0 11.3 105 7-113 79-191 (344)
140 3pvc_A TRNA 5-methylaminomethy 99.0 2E-09 7E-14 107.3 14.1 61 79-151 410-471 (689)
141 1y56_B Sarcosine oxidase; dehy 99.0 1.1E-09 3.8E-14 101.4 11.1 59 78-149 146-205 (382)
142 3nyc_A D-arginine dehydrogenas 99.0 8.5E-10 2.9E-14 102.1 10.1 58 79-149 152-209 (381)
143 4at0_A 3-ketosteroid-delta4-5a 99.0 5.4E-09 1.8E-13 100.6 15.5 61 82-149 203-264 (510)
144 3da1_A Glycerol-3-phosphate de 99.0 2.9E-09 9.8E-14 103.4 13.4 65 79-149 168-232 (561)
145 1pn0_A Phenol 2-monooxygenase; 99.0 5.1E-09 1.7E-13 103.7 13.9 139 7-149 8-230 (665)
146 2gf3_A MSOX, monomeric sarcosi 99.0 3.6E-09 1.2E-13 98.2 12.0 59 79-150 148-206 (389)
147 2gag_B Heterotetrameric sarcos 99.0 3.4E-09 1.2E-13 98.9 11.4 60 78-149 171-230 (405)
148 2wdq_A Succinate dehydrogenase 98.9 1.1E-08 3.6E-13 99.9 14.2 145 1-150 1-207 (588)
149 2oln_A NIKD protein; flavoprot 98.9 5.7E-09 1.9E-13 97.2 11.7 57 80-149 152-208 (397)
150 2qcu_A Aerobic glycerol-3-phos 98.9 1.3E-08 4.4E-13 97.7 14.4 65 79-150 147-211 (501)
151 2aqj_A Tryptophan halogenase, 98.9 2.1E-09 7.1E-14 104.2 8.9 62 78-150 162-223 (538)
152 3c4n_A Uncharacterized protein 98.9 1.2E-09 4.2E-14 101.9 6.8 36 7-42 36-73 (405)
153 2gjc_A Thiazole biosynthetic e 98.9 1.1E-08 3.9E-13 91.1 11.7 105 7-113 65-177 (326)
154 1d4d_A Flavocytochrome C fumar 98.9 1.9E-08 6.6E-13 97.9 13.9 138 7-150 126-318 (572)
155 2e4g_A Tryptophan halogenase; 98.8 1.2E-08 4.1E-13 99.1 10.3 62 78-150 191-253 (550)
156 3ka7_A Oxidoreductase; structu 98.8 1.1E-08 3.9E-13 96.0 9.6 39 8-46 1-39 (425)
157 3kkj_A Amine oxidase, flavin-c 98.8 4.9E-09 1.7E-13 92.4 6.6 45 8-52 3-47 (336)
158 2pyx_A Tryptophan halogenase; 98.8 1.8E-08 6.2E-13 97.3 11.0 62 78-150 172-234 (526)
159 2weu_A Tryptophan 5-halogenase 98.8 6.7E-09 2.3E-13 100.0 7.6 63 78-151 170-232 (511)
160 3nrn_A Uncharacterized protein 98.8 9.6E-09 3.3E-13 96.4 8.3 39 8-46 1-39 (421)
161 3k7m_X 6-hydroxy-L-nicotine ox 98.8 2E-08 6.7E-13 94.6 10.5 39 8-46 2-40 (431)
162 1pj5_A N,N-dimethylglycine oxi 98.8 3.3E-08 1.1E-12 100.7 11.8 58 79-149 149-207 (830)
163 2yqu_A 2-oxoglutarate dehydrog 98.7 7.7E-08 2.6E-12 91.2 13.1 101 7-154 167-267 (455)
164 2h88_A Succinate dehydrogenase 98.7 1E-07 3.5E-12 93.2 14.2 139 7-151 18-219 (621)
165 1chu_A Protein (L-aspartate ox 98.7 2.6E-08 9E-13 96.1 9.9 38 6-44 7-44 (540)
166 3i6d_A Protoporphyrinogen oxid 98.7 1.5E-08 5.1E-13 96.4 7.9 39 7-45 5-49 (470)
167 1kf6_A Fumarate reductase flav 98.7 9.6E-08 3.3E-12 93.3 13.6 140 7-152 5-200 (602)
168 2rgh_A Alpha-glycerophosphate 98.7 8.3E-08 2.8E-12 93.4 12.6 38 7-44 32-69 (571)
169 2bs2_A Quinol-fumarate reducta 98.7 1.8E-07 6E-12 92.2 13.8 65 80-150 157-221 (660)
170 2v3a_A Rubredoxin reductase; a 98.7 1.1E-07 3.8E-12 88.0 11.8 101 7-153 145-245 (384)
171 3gyx_A Adenylylsulfate reducta 98.7 1.5E-07 5.1E-12 92.7 12.8 36 7-42 22-63 (662)
172 2eq6_A Pyruvate dehydrogenase 98.7 1.8E-07 6.3E-12 88.8 12.7 104 7-155 169-275 (464)
173 1rp0_A ARA6, thiazole biosynth 98.6 2.2E-08 7.4E-13 88.7 4.7 192 186-394 39-276 (284)
174 1ebd_A E3BD, dihydrolipoamide 98.6 3.4E-07 1.2E-11 86.7 13.0 104 7-154 170-273 (455)
175 1v59_A Dihydrolipoamide dehydr 98.6 4.1E-07 1.4E-11 86.7 13.6 108 7-154 183-290 (478)
176 3c4a_A Probable tryptophan hyd 98.6 1.2E-08 4.3E-13 94.3 2.9 120 8-150 1-144 (381)
177 3axb_A Putative oxidoreductase 98.6 1E-07 3.5E-12 90.1 9.2 33 7-39 23-56 (448)
178 1nhp_A NADH peroxidase; oxidor 98.6 1.7E-07 5.7E-12 88.7 10.6 102 6-154 148-249 (447)
179 2e1m_A L-glutamate oxidase; L- 98.6 1.7E-07 5.8E-12 85.7 10.0 45 5-49 42-87 (376)
180 3nks_A Protoporphyrinogen oxid 98.6 1.7E-07 5.9E-12 89.3 10.2 39 8-46 3-43 (477)
181 1ges_A Glutathione reductase; 98.6 2.8E-07 9.7E-12 87.1 11.4 102 7-154 167-268 (450)
182 3hyw_A Sulfide-quinone reducta 98.6 1.1E-07 3.6E-12 89.5 8.3 104 186-332 2-110 (430)
183 2r9z_A Glutathione amide reduc 98.6 3.7E-07 1.3E-11 86.6 11.5 101 7-154 166-267 (463)
184 4b1b_A TRXR, thioredoxin reduc 98.5 5.1E-07 1.8E-11 86.8 12.3 101 7-155 223-323 (542)
185 4gde_A UDP-galactopyranose mut 98.5 6E-08 2E-12 93.4 5.8 47 1-47 4-51 (513)
186 1jnr_A Adenylylsulfate reducta 98.5 8.5E-07 2.9E-11 87.5 13.4 35 7-41 22-60 (643)
187 3lxd_A FAD-dependent pyridine 98.5 7.5E-07 2.6E-11 83.3 12.3 102 7-153 152-253 (415)
188 3urh_A Dihydrolipoyl dehydroge 98.5 1.4E-06 4.7E-11 83.4 14.2 106 7-154 198-303 (491)
189 4gut_A Lysine-specific histone 98.5 8.3E-07 2.8E-11 88.9 13.1 39 6-44 335-373 (776)
190 1zk7_A HGII, reductase, mercur 98.5 5.9E-07 2E-11 85.4 11.5 98 7-153 176-273 (467)
191 1onf_A GR, grase, glutathione 98.5 8.9E-07 3E-11 84.8 12.6 101 7-153 176-277 (500)
192 2a8x_A Dihydrolipoyl dehydroge 98.5 7.4E-07 2.5E-11 84.6 11.8 103 7-154 171-274 (464)
193 1zmd_A Dihydrolipoyl dehydroge 98.5 1.4E-06 4.8E-11 82.9 13.7 105 7-154 178-285 (474)
194 1dxl_A Dihydrolipoamide dehydr 98.5 6.9E-07 2.4E-11 85.0 11.5 103 7-154 177-282 (470)
195 1lvl_A Dihydrolipoamide dehydr 98.5 3.9E-07 1.3E-11 86.3 9.6 102 7-155 171-272 (458)
196 2qae_A Lipoamide, dihydrolipoy 98.5 9.3E-07 3.2E-11 84.0 11.9 103 7-154 174-279 (468)
197 3fg2_P Putative rubredoxin red 98.5 7.9E-07 2.7E-11 82.8 11.0 102 7-153 142-243 (404)
198 3ef6_A Toluene 1,2-dioxygenase 98.5 4.2E-07 1.5E-11 84.8 9.2 101 7-153 143-243 (410)
199 3oc4_A Oxidoreductase, pyridin 98.5 1.5E-06 5E-11 82.2 12.9 102 7-155 147-248 (452)
200 1ojt_A Surface protein; redox- 98.5 5.9E-07 2E-11 85.7 10.2 104 7-153 185-288 (482)
201 1fec_A Trypanothione reductase 98.5 1.1E-06 3.7E-11 84.0 12.0 102 7-154 187-291 (490)
202 2gqw_A Ferredoxin reductase; f 98.5 8.1E-07 2.8E-11 82.8 10.8 97 7-153 145-241 (408)
203 3sx6_A Sulfide-quinone reducta 98.4 4.3E-07 1.5E-11 85.5 8.9 105 187-334 5-115 (437)
204 3ic9_A Dihydrolipoamide dehydr 98.4 1.6E-06 5.6E-11 82.8 12.8 104 7-154 174-277 (492)
205 2bcg_G Secretory pathway GDP d 98.4 1.7E-07 5.9E-12 88.6 5.9 45 4-48 8-52 (453)
206 2wpf_A Trypanothione reductase 98.4 1.3E-06 4.5E-11 83.5 12.0 101 7-153 191-294 (495)
207 1q1r_A Putidaredoxin reductase 98.4 1E-06 3.5E-11 82.8 11.1 102 7-152 149-251 (431)
208 3klj_A NAD(FAD)-dependent dehy 98.4 4.3E-07 1.5E-11 83.8 8.1 108 185-334 8-119 (385)
209 3cgb_A Pyridine nucleotide-dis 98.4 6.9E-07 2.3E-11 85.2 9.7 100 6-153 185-284 (480)
210 2b9w_A Putative aminooxidase; 98.4 2.9E-07 1E-11 86.3 7.0 47 1-48 1-48 (424)
211 1mo9_A ORF3; nucleotide bindin 98.4 1.5E-06 5E-11 83.8 11.9 100 8-153 215-318 (523)
212 1xhc_A NADH oxidase /nitrite r 98.4 5.2E-07 1.8E-11 82.8 8.3 93 8-153 144-236 (367)
213 1xdi_A RV3303C-LPDA; reductase 98.4 1.2E-06 4.2E-11 83.8 11.2 100 7-153 182-281 (499)
214 3iwa_A FAD-dependent pyridine 98.4 1.3E-06 4.4E-11 83.1 11.2 101 7-153 159-260 (472)
215 2cdu_A NADPH oxidase; flavoenz 98.4 1.5E-06 5.2E-11 82.1 11.6 101 7-154 149-250 (452)
216 1v0j_A UDP-galactopyranose mut 98.4 2.4E-07 8.1E-12 86.1 5.7 49 1-49 1-50 (399)
217 1trb_A Thioredoxin reductase; 98.4 1.9E-06 6.5E-11 77.4 11.6 105 7-153 145-249 (320)
218 2bc0_A NADH oxidase; flavoprot 98.4 1.4E-06 4.9E-11 83.2 11.3 101 7-154 194-294 (490)
219 3dgh_A TRXR-1, thioredoxin red 98.4 4.1E-06 1.4E-10 79.9 14.4 105 7-153 187-291 (483)
220 3vrd_B FCCB subunit, flavocyto 98.4 7.1E-07 2.4E-11 83.0 8.6 106 185-334 1-111 (401)
221 2hqm_A GR, grase, glutathione 98.4 1.8E-06 6.1E-11 82.3 11.5 103 7-153 185-287 (479)
222 3s5w_A L-ornithine 5-monooxyge 98.4 2.9E-06 1E-10 80.4 12.9 132 7-152 227-378 (463)
223 3dgz_A Thioredoxin reductase 2 98.4 5.2E-06 1.8E-10 79.3 14.5 106 7-154 185-290 (488)
224 3o0h_A Glutathione reductase; 98.4 1.8E-06 6.3E-11 82.3 11.3 101 7-154 191-291 (484)
225 3lad_A Dihydrolipoamide dehydr 98.4 3.7E-06 1.3E-10 80.0 13.2 104 7-154 180-283 (476)
226 3ntd_A FAD-dependent pyridine 98.3 2.4E-06 8.1E-11 83.3 11.5 102 7-153 151-269 (565)
227 4dgk_A Phytoene dehydrogenase; 98.3 3.1E-07 1.1E-11 88.1 5.0 39 8-46 2-40 (501)
228 4eqs_A Coenzyme A disulfide re 98.3 1.1E-06 3.6E-11 82.7 8.5 96 7-153 147-242 (437)
229 1m6i_A Programmed cell death p 98.3 2.6E-06 9E-11 81.4 11.3 101 7-153 180-284 (493)
230 3dk9_A Grase, GR, glutathione 98.3 4.7E-06 1.6E-10 79.4 12.8 110 7-154 187-296 (478)
231 4dna_A Probable glutathione re 98.3 4.6E-06 1.6E-10 79.1 12.1 101 7-154 170-271 (463)
232 3h28_A Sulfide-quinone reducta 98.3 1.4E-06 4.7E-11 81.9 8.3 105 187-334 3-112 (430)
233 3hdq_A UDP-galactopyranose mut 98.3 9.2E-07 3.2E-11 81.5 6.9 44 6-49 28-71 (397)
234 2zbw_A Thioredoxin reductase; 98.3 4.9E-06 1.7E-10 75.2 11.5 103 7-153 152-254 (335)
235 3qfa_A Thioredoxin reductase 1 98.3 1.3E-05 4.5E-10 77.0 14.9 107 7-154 210-318 (519)
236 4dsg_A UDP-galactopyranose mut 98.3 1.2E-06 4E-11 83.6 7.2 52 6-57 8-61 (484)
237 3h8l_A NADH oxidase; membrane 98.3 2.1E-06 7.2E-11 80.0 8.8 105 187-334 2-116 (409)
238 3fbs_A Oxidoreductase; structu 98.2 2.2E-06 7.4E-11 76.0 7.9 107 187-334 3-115 (297)
239 2ivd_A PPO, PPOX, protoporphyr 98.2 9E-07 3.1E-11 84.3 5.5 40 7-46 16-55 (478)
240 2yg5_A Putrescine oxidase; oxi 98.2 9.3E-07 3.2E-11 83.6 5.3 41 7-47 5-45 (453)
241 1rsg_A FMS1 protein; FAD bindi 98.2 7.2E-07 2.5E-11 85.9 4.4 40 7-46 8-48 (516)
242 4g6h_A Rotenone-insensitive NA 98.2 6.3E-06 2.2E-10 78.8 10.2 99 8-147 218-330 (502)
243 3kd9_A Coenzyme A disulfide re 98.2 9.4E-06 3.2E-10 76.6 11.0 99 7-153 148-246 (449)
244 3ab1_A Ferredoxin--NADP reduct 98.2 7.7E-06 2.6E-10 74.8 10.1 102 7-153 163-265 (360)
245 1sez_A Protoporphyrinogen oxid 98.2 1.6E-06 5.4E-11 83.3 5.6 41 7-47 13-53 (504)
246 3ics_A Coenzyme A-disulfide re 98.1 6.5E-06 2.2E-10 80.5 9.8 98 7-153 187-284 (588)
247 3d1c_A Flavin-containing putat 98.1 8.5E-06 2.9E-10 74.7 9.9 108 7-153 166-274 (369)
248 1s3e_A Amine oxidase [flavin-c 98.1 2E-06 6.9E-11 82.9 5.8 40 7-46 4-43 (520)
249 2jae_A L-amino acid oxidase; o 98.1 2.2E-06 7.7E-11 81.8 5.9 41 6-46 10-50 (489)
250 2bi7_A UDP-galactopyranose mut 98.1 2.4E-06 8.2E-11 78.9 5.6 43 7-49 3-45 (384)
251 1i8t_A UDP-galactopyranose mut 98.1 2.4E-06 8.1E-11 78.4 5.5 41 8-48 2-42 (367)
252 2vvm_A Monoamine oxidase N; FA 98.1 2.3E-06 8E-11 81.9 5.6 39 8-46 40-78 (495)
253 3l8k_A Dihydrolipoyl dehydroge 98.1 1.4E-05 4.8E-10 75.8 10.9 102 7-154 172-275 (466)
254 3lov_A Protoporphyrinogen oxid 98.1 2.8E-06 9.6E-11 80.8 5.6 41 7-47 4-46 (475)
255 2x8g_A Thioredoxin glutathione 98.1 4.3E-05 1.5E-09 74.9 13.6 105 7-153 286-397 (598)
256 2iid_A L-amino-acid oxidase; f 98.1 3.1E-06 1.1E-10 81.0 5.4 41 6-46 32-72 (498)
257 3itj_A Thioredoxin reductase 1 98.0 2.7E-05 9.2E-10 70.3 10.6 100 7-153 173-273 (338)
258 1fl2_A Alkyl hydroperoxide red 98.0 4.3E-05 1.5E-09 68.1 11.8 99 7-153 144-244 (310)
259 2q7v_A Thioredoxin reductase; 98.0 1.8E-05 6.1E-10 71.2 8.8 100 7-153 152-251 (325)
260 4fk1_A Putative thioredoxin re 98.0 1.1E-05 3.9E-10 71.8 7.4 34 186-219 6-39 (304)
261 1d5t_A Guanine nucleotide diss 98.0 6.1E-06 2.1E-10 77.5 5.8 42 7-48 6-47 (433)
262 3f8d_A Thioredoxin reductase ( 98.0 3.4E-05 1.2E-09 69.0 10.4 99 7-152 154-252 (323)
263 3cty_A Thioredoxin reductase; 98.0 3.1E-05 1.1E-09 69.4 10.0 99 7-153 155-254 (319)
264 2q0l_A TRXR, thioredoxin reduc 98.0 2.1E-05 7.2E-10 70.2 8.7 101 7-153 143-243 (311)
265 1b37_A Protein (polyamine oxid 98.0 6.6E-06 2.2E-10 78.2 5.6 42 7-48 4-46 (472)
266 1c0p_A D-amino acid oxidase; a 97.9 8.6E-06 2.9E-10 74.6 5.9 34 7-40 6-39 (363)
267 1vdc_A NTR, NADPH dependent th 97.9 4.5E-05 1.6E-09 68.7 10.1 102 7-153 159-261 (333)
268 3p1w_A Rabgdi protein; GDI RAB 97.9 8.5E-06 2.9E-10 76.6 5.4 42 7-48 20-61 (475)
269 3lzw_A Ferredoxin--NADP reduct 97.9 7.1E-05 2.4E-09 67.3 11.1 99 7-153 154-252 (332)
270 3ihm_A Styrene monooxygenase A 97.9 6.9E-06 2.4E-10 77.0 4.2 34 7-40 22-55 (430)
271 3r9u_A Thioredoxin reductase; 97.9 3.1E-05 1.1E-09 69.0 8.1 101 7-154 147-247 (315)
272 2a87_A TRXR, TR, thioredoxin r 97.9 2.3E-05 7.9E-10 70.8 7.1 101 7-154 155-255 (335)
273 3pl8_A Pyranose 2-oxidase; sub 97.8 1.2E-05 4.2E-10 78.8 5.0 40 7-46 46-85 (623)
274 4a9w_A Monooxygenase; baeyer-v 97.8 2E-05 6.8E-10 71.6 5.4 33 187-219 4-36 (357)
275 3v76_A Flavoprotein; structura 97.8 2.2E-05 7.7E-10 73.0 5.7 34 186-219 27-60 (417)
276 4gcm_A TRXR, thioredoxin reduc 97.8 3.2E-05 1.1E-09 69.1 6.4 33 187-219 7-39 (312)
277 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00014 5E-09 69.8 11.4 99 7-153 355-455 (521)
278 2z3y_A Lysine-specific histone 97.8 2.1E-05 7.3E-10 77.8 5.7 41 6-46 106-146 (662)
279 3k7m_X 6-hydroxy-L-nicotine ox 97.8 7.2E-05 2.5E-09 70.0 8.9 78 292-371 215-306 (431)
280 3k30_A Histamine dehydrogenase 97.7 7.9E-05 2.7E-09 74.2 9.1 101 7-152 523-625 (690)
281 3g3e_A D-amino-acid oxidase; F 97.7 1.6E-05 5.4E-10 72.4 3.7 34 8-41 1-40 (351)
282 2xag_A Lysine-specific histone 97.7 3E-05 1E-09 78.3 6.0 41 6-46 277-317 (852)
283 3g5s_A Methylenetetrahydrofola 97.7 3.6E-05 1.2E-09 69.7 5.4 35 8-42 2-36 (443)
284 2bry_A NEDD9 interacting prote 97.7 4.6E-05 1.6E-09 72.7 6.4 129 185-334 91-233 (497)
285 3alj_A 2-methyl-3-hydroxypyrid 97.7 0.00011 3.8E-09 67.5 8.5 138 186-333 11-162 (379)
286 4a5l_A Thioredoxin reductase; 97.7 0.00017 5.8E-09 64.3 9.3 34 7-40 152-185 (314)
287 3nlc_A Uncharacterized protein 97.6 5E-05 1.7E-09 72.9 5.9 34 186-219 107-140 (549)
288 2gqf_A Hypothetical protein HI 97.6 6E-05 2E-09 69.9 6.1 33 187-219 5-37 (401)
289 2xve_A Flavin-containing monoo 97.6 0.00021 7.1E-09 67.6 9.0 35 7-41 197-231 (464)
290 2gag_A Heterotetrameric sarcos 97.5 0.00016 5.5E-09 74.6 8.6 98 8-153 285-385 (965)
291 1lqt_A FPRA; NADP+ derivative, 97.5 4.2E-05 1.4E-09 72.1 3.6 98 186-330 3-107 (456)
292 2i0z_A NAD(FAD)-utilizing dehy 97.5 0.00017 5.7E-09 67.9 7.4 34 186-219 26-59 (447)
293 4ap3_A Steroid monooxygenase; 97.5 0.00012 4.2E-09 70.6 6.5 34 186-219 21-54 (549)
294 2gv8_A Monooxygenase; FMO, FAD 97.5 0.00046 1.6E-08 64.9 9.7 34 7-40 212-246 (447)
295 1vg0_A RAB proteins geranylger 97.4 0.00014 4.9E-09 70.6 6.0 44 5-48 6-49 (650)
296 3gwf_A Cyclohexanone monooxyge 97.4 0.00015 5E-09 69.9 5.9 33 187-219 9-42 (540)
297 2x3n_A Probable FAD-dependent 97.4 7.9E-05 2.7E-09 69.0 3.8 33 187-219 7-39 (399)
298 2vdc_G Glutamate synthase [NAD 97.4 0.00035 1.2E-08 65.8 8.2 34 7-40 264-298 (456)
299 1kdg_A CDH, cellobiose dehydro 97.4 0.00012 4.2E-09 70.8 5.1 35 6-40 6-40 (546)
300 1cjc_A Protein (adrenodoxin re 97.4 0.0012 4.2E-08 62.1 11.4 34 7-40 145-199 (460)
301 3uox_A Otemo; baeyer-villiger 97.4 0.00014 4.6E-09 70.2 4.8 34 186-219 9-42 (545)
302 2zxi_A TRNA uridine 5-carboxym 97.3 9.2E-05 3.1E-09 71.7 3.2 141 186-334 27-183 (637)
303 3t37_A Probable dehydrogenase; 97.3 0.00013 4.6E-09 70.2 4.4 35 7-41 17-52 (526)
304 2gjc_A Thiazole biosynthetic e 97.3 0.00013 4.4E-09 65.0 3.3 33 187-219 66-100 (326)
305 3ayj_A Pro-enzyme of L-phenyla 97.2 0.0001 3.6E-09 72.5 2.7 36 7-42 56-100 (721)
306 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00042 1.4E-08 68.8 7.1 127 7-152 494-629 (671)
307 3q9t_A Choline dehydrogenase a 97.2 0.00021 7.1E-09 69.2 4.7 36 6-41 5-41 (577)
308 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00063 2.2E-08 66.1 7.9 139 186-333 28-183 (651)
309 1o94_A Tmadh, trimethylamine d 97.2 0.00078 2.7E-08 67.4 8.8 104 7-153 528-648 (729)
310 1ju2_A HydroxynitrIle lyase; f 97.2 0.00018 6.1E-09 69.3 3.7 35 7-42 26-60 (536)
311 3fmw_A Oxygenase; mithramycin, 97.2 7.7E-05 2.6E-09 72.4 1.1 34 186-219 49-82 (570)
312 1y56_B Sarcosine oxidase; dehy 97.2 0.00092 3.1E-08 61.3 8.0 34 186-219 5-38 (382)
313 3cp8_A TRNA uridine 5-carboxym 97.2 0.00016 5.4E-09 70.3 2.8 34 186-219 21-54 (641)
314 2vou_A 2,6-dihydroxypyridine h 97.2 0.00017 5.9E-09 66.7 3.0 35 186-220 5-39 (397)
315 3i3l_A Alkylhalidase CMLS; fla 97.1 0.00026 8.7E-09 68.9 4.0 35 185-219 22-56 (591)
316 1n4w_A CHOD, cholesterol oxida 97.1 0.00045 1.5E-08 66.0 5.2 38 6-43 4-41 (504)
317 3jsk_A Cypbp37 protein; octame 97.0 9.6E-05 3.3E-09 66.2 0.1 34 186-219 79-114 (344)
318 3qvp_A Glucose oxidase; oxidor 97.0 0.00043 1.5E-08 67.0 4.5 35 6-40 18-53 (583)
319 1yvv_A Amine oxidase, flavin-c 97.0 0.00062 2.1E-08 61.2 5.3 33 187-219 3-35 (336)
320 1y0p_A Fumarate reductase flav 97.0 0.0028 9.5E-08 61.6 10.1 34 186-219 126-159 (571)
321 1gte_A Dihydropyrimidine dehyd 97.0 0.0035 1.2E-07 65.1 11.4 34 7-40 332-366 (1025)
322 3qj4_A Renalase; FAD/NAD(P)-bi 97.0 0.00047 1.6E-08 62.3 4.2 33 187-219 2-37 (342)
323 3rp8_A Flavoprotein monooxygen 97.0 0.00018 6.1E-09 66.8 1.3 35 185-219 22-56 (407)
324 3nix_A Flavoprotein/dehydrogen 97.0 0.0017 5.9E-08 60.3 8.1 33 187-219 6-38 (421)
325 1coy_A Cholesterol oxidase; ox 97.0 0.00062 2.1E-08 65.1 4.9 36 6-41 10-45 (507)
326 3dfz_A SIRC, precorrin-2 dehyd 97.0 0.00073 2.5E-08 56.5 4.7 37 183-219 28-64 (223)
327 1qo8_A Flavocytochrome C3 fuma 96.9 0.0029 9.9E-08 61.4 9.5 34 186-219 121-154 (566)
328 2xdo_A TETX2 protein; tetracyc 96.9 0.00061 2.1E-08 63.0 4.4 34 186-219 26-59 (398)
329 2g1u_A Hypothetical protein TM 96.9 0.00098 3.4E-08 52.6 4.9 40 1-40 13-52 (155)
330 1k0i_A P-hydroxybenzoate hydro 96.9 0.0016 5.6E-08 59.9 7.2 33 187-219 3-35 (394)
331 3dme_A Conserved exported prot 96.9 0.0011 3.7E-08 60.3 5.9 33 187-219 5-37 (369)
332 3nrn_A Uncharacterized protein 96.9 0.0042 1.4E-07 57.7 10.0 49 283-331 191-243 (421)
333 3fim_B ARYL-alcohol oxidase; A 96.9 0.00042 1.4E-08 67.0 3.1 36 7-42 2-38 (566)
334 4hb9_A Similarities with proba 96.9 0.0012 4.1E-08 61.0 6.1 32 188-219 3-34 (412)
335 3e1t_A Halogenase; flavoprotei 96.8 0.00065 2.2E-08 65.1 4.0 33 187-219 8-40 (512)
336 1ryi_A Glycine oxidase; flavop 96.8 0.0037 1.3E-07 57.2 8.8 34 186-219 17-50 (382)
337 1gpe_A Protein (glucose oxidas 96.8 0.00096 3.3E-08 64.9 5.1 36 6-41 23-59 (587)
338 2gag_B Heterotetrameric sarcos 96.8 0.0033 1.1E-07 58.0 8.2 34 186-219 21-56 (405)
339 1w4x_A Phenylacetone monooxyge 96.7 0.003 1E-07 60.9 7.7 34 186-219 16-49 (542)
340 2jbv_A Choline oxidase; alcoho 96.7 0.0011 3.9E-08 63.9 4.5 36 7-42 13-49 (546)
341 3ps9_A TRNA 5-methylaminomethy 96.7 0.0043 1.5E-07 61.6 8.8 34 186-219 272-305 (676)
342 3atr_A Conserved archaeal prot 96.6 0.0034 1.2E-07 59.0 7.0 33 187-219 7-39 (453)
343 2qa1_A PGAE, polyketide oxygen 96.6 0.00028 9.7E-09 67.3 -0.8 34 186-219 11-44 (500)
344 3nyc_A D-arginine dehydrogenas 96.5 0.002 6.7E-08 59.0 4.9 33 186-219 9-41 (381)
345 4b63_A L-ornithine N5 monooxyg 96.5 0.013 4.3E-07 55.9 10.6 35 7-41 246-282 (501)
346 1d4d_A Flavocytochrome C fumar 96.5 0.0054 1.8E-07 59.5 8.2 34 186-219 126-159 (572)
347 2qa2_A CABE, polyketide oxygen 96.5 0.00026 9E-09 67.5 -1.2 34 186-219 12-45 (499)
348 4at0_A 3-ketosteroid-delta4-5a 96.5 0.01 3.5E-07 56.7 9.8 33 187-219 42-74 (510)
349 3cgv_A Geranylgeranyl reductas 96.5 0.0019 6.3E-08 59.5 4.5 33 187-219 5-37 (397)
350 3pvc_A TRNA 5-methylaminomethy 96.4 0.003 1E-07 62.8 5.4 34 186-219 264-297 (689)
351 1y56_A Hypothetical protein PH 96.3 0.0016 5.5E-08 62.0 2.9 32 187-219 109-140 (493)
352 3ihg_A RDME; flavoenzyme, anth 96.3 0.0015 5.2E-08 62.9 2.7 34 186-219 5-38 (535)
353 3fwz_A Inner membrane protein 96.2 0.006 2.1E-07 47.1 5.2 34 7-40 7-40 (140)
354 3llv_A Exopolyphosphatase-rela 96.2 0.005 1.7E-07 47.5 4.6 34 7-40 6-39 (141)
355 1chu_A Protein (L-aspartate ox 96.1 0.032 1.1E-06 53.6 10.8 32 187-219 9-40 (540)
356 2e5v_A L-aspartate oxidase; ar 96.1 0.014 4.8E-07 55.1 8.0 31 188-218 1-31 (472)
357 2pyx_A Tryptophan halogenase; 95.9 0.0036 1.2E-07 60.1 3.2 34 186-219 7-52 (526)
358 2qcu_A Aerobic glycerol-3-phos 95.9 0.017 5.9E-07 55.0 7.8 33 187-219 4-36 (501)
359 1id1_A Putative potassium chan 95.9 0.012 4.1E-07 46.1 5.7 34 7-40 3-36 (153)
360 2gmh_A Electron transfer flavo 95.9 0.007 2.4E-07 58.8 5.0 33 187-219 36-74 (584)
361 1pj5_A N,N-dimethylglycine oxi 95.9 0.0089 3E-07 60.8 5.9 34 186-219 4-38 (830)
362 1lss_A TRK system potassium up 95.8 0.01 3.4E-07 45.5 4.7 34 7-40 4-37 (140)
363 3kkj_A Amine oxidase, flavin-c 95.7 0.0049 1.7E-07 53.2 2.7 32 188-219 4-35 (336)
364 1kf6_A Fumarate reductase flav 95.6 0.13 4.4E-06 50.1 12.7 33 187-219 6-40 (602)
365 2wdq_A Succinate dehydrogenase 95.6 0.11 3.7E-06 50.4 12.1 33 187-219 8-40 (588)
366 2r0c_A REBC; flavin adenine di 95.5 0.005 1.7E-07 59.5 2.3 33 187-219 27-59 (549)
367 2hmt_A YUAA protein; RCK, KTN, 95.4 0.017 5.9E-07 44.3 4.9 34 7-40 6-39 (144)
368 2h88_A Succinate dehydrogenase 95.4 0.09 3.1E-06 51.3 10.6 33 187-219 19-51 (621)
369 3ado_A Lambda-crystallin; L-gu 95.3 0.014 4.7E-07 51.7 4.4 39 1-40 1-39 (319)
370 2dkh_A 3-hydroxybenzoate hydro 95.2 0.0048 1.6E-07 60.7 1.0 33 187-219 33-66 (639)
371 3ic5_A Putative saccharopine d 95.2 0.02 6.8E-07 42.3 4.3 34 7-40 5-39 (118)
372 3c85_A Putative glutathione-re 95.2 0.022 7.6E-07 46.0 4.9 34 7-40 39-73 (183)
373 4dgk_A Phytoene dehydrogenase; 94.9 0.0097 3.3E-07 56.6 2.2 33 187-219 2-34 (501)
374 3dfz_A SIRC, precorrin-2 dehyd 94.8 0.035 1.2E-06 46.3 5.1 35 6-40 30-64 (223)
375 3lk7_A UDP-N-acetylmuramoylala 94.7 0.061 2.1E-06 50.4 7.3 37 183-219 6-42 (451)
376 1pzg_A LDH, lactate dehydrogen 94.6 0.039 1.3E-06 49.3 5.2 35 6-40 8-43 (331)
377 3l4b_C TRKA K+ channel protien 94.6 0.025 8.7E-07 47.2 3.8 32 9-40 2-33 (218)
378 1pjq_A CYSG, siroheme synthase 94.5 0.026 8.8E-07 52.9 4.2 36 184-219 10-45 (457)
379 2dpo_A L-gulonate 3-dehydrogen 94.5 0.03 1E-06 49.7 4.4 34 7-40 6-39 (319)
380 3lk7_A UDP-N-acetylmuramoylala 94.5 0.037 1.3E-06 51.9 5.1 34 7-40 9-42 (451)
381 3g0o_A 3-hydroxyisobutyrate de 94.4 0.037 1.2E-06 48.9 4.6 40 1-40 1-40 (303)
382 1kyq_A Met8P, siroheme biosynt 94.4 0.028 9.7E-07 48.4 3.7 35 6-40 12-46 (274)
383 3i83_A 2-dehydropantoate 2-red 94.3 0.045 1.5E-06 48.7 5.0 33 187-219 3-35 (320)
384 3ihm_A Styrene monooxygenase A 94.2 0.025 8.4E-07 52.7 3.2 34 186-219 22-55 (430)
385 2x5o_A UDP-N-acetylmuramoylala 94.1 0.04 1.4E-06 51.5 4.4 36 7-42 5-40 (439)
386 3oz2_A Digeranylgeranylglycero 94.1 0.025 8.4E-07 51.7 2.9 32 188-219 6-37 (397)
387 3eag_A UDP-N-acetylmuramate:L- 94.0 0.078 2.7E-06 47.3 6.1 34 186-219 4-38 (326)
388 1kyq_A Met8P, siroheme biosynt 94.0 0.04 1.4E-06 47.5 3.9 37 183-219 10-46 (274)
389 3g5s_A Methylenetetrahydrofola 93.9 0.031 1.1E-06 50.7 3.2 33 187-219 2-34 (443)
390 1y6j_A L-lactate dehydrogenase 93.9 0.05 1.7E-06 48.3 4.5 40 1-40 1-42 (318)
391 4dio_A NAD(P) transhydrogenase 93.8 0.06 2.1E-06 49.1 4.9 34 7-40 190-223 (405)
392 3hn2_A 2-dehydropantoate 2-red 93.7 0.076 2.6E-06 47.0 5.4 33 187-219 3-35 (312)
393 3l6d_A Putative oxidoreductase 93.7 0.085 2.9E-06 46.6 5.7 34 7-40 9-42 (306)
394 1f0y_A HCDH, L-3-hydroxyacyl-C 93.5 0.078 2.7E-06 46.7 5.0 33 8-40 16-48 (302)
395 3i83_A 2-dehydropantoate 2-red 93.5 0.069 2.4E-06 47.5 4.7 33 8-40 3-35 (320)
396 2a9f_A Putative malic enzyme ( 93.5 0.07 2.4E-06 48.2 4.6 35 6-40 187-222 (398)
397 3p2y_A Alanine dehydrogenase/p 93.4 0.064 2.2E-06 48.5 4.3 34 7-40 184-217 (381)
398 2g1u_A Hypothetical protein TM 93.4 0.064 2.2E-06 42.0 3.9 36 184-219 17-52 (155)
399 4e12_A Diketoreductase; oxidor 93.4 0.07 2.4E-06 46.5 4.5 33 8-40 5-37 (283)
400 3ghy_A Ketopantoate reductase 93.4 0.083 2.9E-06 47.3 5.1 32 8-39 4-35 (335)
401 4g65_A TRK system potassium up 93.3 0.037 1.3E-06 51.9 2.6 34 7-40 3-36 (461)
402 2raf_A Putative dinucleotide-b 93.2 0.09 3.1E-06 43.5 4.7 34 7-40 19-52 (209)
403 3ktd_A Prephenate dehydrogenas 93.2 0.1 3.5E-06 46.7 5.2 40 1-40 2-41 (341)
404 3hn2_A 2-dehydropantoate 2-red 93.1 0.075 2.6E-06 47.0 4.3 33 8-40 3-35 (312)
405 1ks9_A KPA reductase;, 2-dehyd 93.1 0.087 3E-06 45.9 4.7 32 9-40 2-33 (291)
406 3k96_A Glycerol-3-phosphate de 93.1 0.1 3.5E-06 47.1 5.1 34 7-40 29-62 (356)
407 1lld_A L-lactate dehydrogenase 93.0 0.088 3E-06 46.7 4.7 34 7-40 7-42 (319)
408 1vl6_A Malate oxidoreductase; 93.0 0.092 3.1E-06 47.4 4.6 34 6-39 191-225 (388)
409 2oln_A NIKD protein; flavoprot 93.0 0.059 2E-06 49.4 3.6 33 187-219 5-37 (397)
410 1zej_A HBD-9, 3-hydroxyacyl-CO 93.0 0.073 2.5E-06 46.5 3.9 33 7-40 12-44 (293)
411 3pid_A UDP-glucose 6-dehydroge 93.0 0.087 3E-06 48.7 4.5 34 6-40 35-68 (432)
412 2iid_A L-amino-acid oxidase; f 93.0 0.053 1.8E-06 51.4 3.3 34 186-219 33-66 (498)
413 3oj0_A Glutr, glutamyl-tRNA re 92.9 0.052 1.8E-06 41.9 2.6 34 7-40 21-54 (144)
414 3hwr_A 2-dehydropantoate 2-red 92.9 0.1 3.5E-06 46.3 4.8 35 184-219 17-51 (318)
415 3ka7_A Oxidoreductase; structu 92.9 0.051 1.8E-06 50.3 3.0 33 187-219 1-33 (425)
416 3c4a_A Probable tryptophan hyd 92.9 0.058 2E-06 49.2 3.3 33 187-219 1-35 (381)
417 1id1_A Putative potassium chan 92.8 0.093 3.2E-06 40.9 4.0 35 185-219 2-36 (153)
418 2ewd_A Lactate dehydrogenase,; 92.8 0.11 3.6E-06 46.2 4.8 34 7-40 4-38 (317)
419 3l9w_A Glutathione-regulated p 92.8 0.096 3.3E-06 48.3 4.6 34 7-40 4-37 (413)
420 3g17_A Similar to 2-dehydropan 92.8 0.1 3.5E-06 45.7 4.6 33 8-40 3-35 (294)
421 3dtt_A NADP oxidoreductase; st 92.7 0.12 4.2E-06 43.8 4.8 34 7-40 19-52 (245)
422 3tl2_A Malate dehydrogenase; c 92.6 0.13 4.5E-06 45.4 5.0 33 7-39 8-41 (315)
423 2uzz_A N-methyl-L-tryptophan o 92.5 0.051 1.8E-06 49.2 2.4 33 187-219 3-35 (372)
424 2aef_A Calcium-gated potassium 92.5 0.063 2.2E-06 45.2 2.8 33 7-40 9-41 (234)
425 1c0p_A D-amino acid oxidase; a 92.5 0.093 3.2E-06 47.4 4.1 34 186-219 6-39 (363)
426 2gf3_A MSOX, monomeric sarcosi 92.5 0.064 2.2E-06 48.9 3.0 33 187-219 4-36 (389)
427 2y0c_A BCEC, UDP-glucose dehyd 92.4 0.11 3.8E-06 48.9 4.6 34 7-40 8-41 (478)
428 3c96_A Flavin-containing monoo 92.4 0.083 2.9E-06 48.7 3.8 34 186-219 4-38 (410)
429 1jw9_B Molybdopterin biosynthe 92.4 0.11 3.7E-06 44.3 4.2 34 7-40 31-65 (249)
430 1x13_A NAD(P) transhydrogenase 92.4 0.12 4E-06 47.5 4.6 34 7-40 172-205 (401)
431 4gde_A UDP-galactopyranose mut 92.3 0.079 2.7E-06 50.3 3.6 43 286-328 227-273 (513)
432 2b9w_A Putative aminooxidase; 92.2 0.074 2.5E-06 49.2 3.1 34 186-219 6-40 (424)
433 1l7d_A Nicotinamide nucleotide 92.2 0.14 4.9E-06 46.7 4.9 34 7-40 172-205 (384)
434 3doj_A AT3G25530, dehydrogenas 92.2 0.14 4.9E-06 45.1 4.8 34 7-40 21-54 (310)
435 4ffl_A PYLC; amino acid, biosy 92.1 0.14 4.8E-06 46.3 4.8 34 8-41 2-35 (363)
436 3qha_A Putative oxidoreductase 92.1 0.13 4.4E-06 45.1 4.4 34 8-41 16-49 (296)
437 3d1l_A Putative NADP oxidoredu 92.1 0.12 4.2E-06 44.4 4.2 34 7-40 10-44 (266)
438 3g3e_A D-amino-acid oxidase; F 92.1 0.099 3.4E-06 47.0 3.7 32 188-219 2-39 (351)
439 2ew2_A 2-dehydropantoate 2-red 92.0 0.13 4.6E-06 45.3 4.5 33 8-40 4-36 (316)
440 3nks_A Protoporphyrinogen oxid 92.0 0.073 2.5E-06 50.1 2.9 33 187-219 3-37 (477)
441 2e1m_A L-glutamate oxidase; L- 92.0 0.087 3E-06 47.9 3.2 34 185-218 43-76 (376)
442 2jae_A L-amino acid oxidase; o 92.0 0.09 3.1E-06 49.7 3.4 34 186-219 11-44 (489)
443 4a7p_A UDP-glucose dehydrogena 92.0 0.15 5E-06 47.5 4.7 35 7-41 8-42 (446)
444 3eag_A UDP-N-acetylmuramate:L- 91.9 0.17 5.6E-06 45.1 4.9 34 7-40 4-38 (326)
445 3dje_A Fructosyl amine: oxygen 91.9 0.1 3.5E-06 48.5 3.7 34 186-219 6-40 (438)
446 3gg2_A Sugar dehydrogenase, UD 91.8 0.14 4.8E-06 47.8 4.5 33 8-40 3-35 (450)
447 3i6d_A Protoporphyrinogen oxid 91.8 0.066 2.2E-06 50.2 2.3 34 186-219 5-44 (470)
448 3pef_A 6-phosphogluconate dehy 91.8 0.15 5.3E-06 44.4 4.5 33 8-40 2-34 (287)
449 2v6b_A L-LDH, L-lactate dehydr 91.7 0.16 5.4E-06 44.8 4.5 32 9-40 2-35 (304)
450 3vps_A TUNA, NAD-dependent epi 91.7 0.2 6.8E-06 44.2 5.2 41 1-41 1-42 (321)
451 2vns_A Metalloreductase steap3 91.6 0.22 7.5E-06 41.3 5.1 34 7-40 28-61 (215)
452 4dll_A 2-hydroxy-3-oxopropiona 91.5 0.16 5.6E-06 45.0 4.5 34 7-40 31-64 (320)
453 2hjr_A Malate dehydrogenase; m 91.5 0.19 6.4E-06 44.8 4.8 33 8-40 15-48 (328)
454 3mog_A Probable 3-hydroxybutyr 91.5 0.2 6.7E-06 47.2 5.1 34 7-40 5-38 (483)
455 1t2d_A LDH-P, L-lactate dehydr 91.4 0.2 7E-06 44.4 4.9 34 7-40 4-38 (322)
456 1bg6_A N-(1-D-carboxylethyl)-L 91.4 0.18 6.1E-06 45.4 4.6 33 8-40 5-37 (359)
457 1z82_A Glycerol-3-phosphate de 91.4 0.19 6.4E-06 45.0 4.7 33 8-40 15-47 (335)
458 3k6j_A Protein F01G10.3, confi 91.3 0.23 7.9E-06 46.2 5.3 33 8-40 55-87 (460)
459 1pjc_A Protein (L-alanine dehy 91.3 0.19 6.6E-06 45.4 4.7 34 7-40 167-200 (361)
460 3g79_A NDP-N-acetyl-D-galactos 91.3 0.16 5.4E-06 47.7 4.2 35 7-41 18-54 (478)
461 3vtf_A UDP-glucose 6-dehydroge 91.2 0.21 7.2E-06 46.2 4.9 34 7-40 21-54 (444)
462 3fpz_A Thiazole biosynthetic e 91.2 0.1 3.4E-06 46.5 2.7 35 185-219 64-100 (326)
463 2bi7_A UDP-galactopyranose mut 91.2 0.16 5.3E-06 46.4 4.0 33 187-219 4-36 (384)
464 3rui_A Ubiquitin-like modifier 91.1 0.21 7.3E-06 44.3 4.6 34 7-40 34-68 (340)
465 3ghy_A Ketopantoate reductase 91.1 0.19 6.4E-06 45.0 4.4 32 187-218 4-35 (335)
466 3pdu_A 3-hydroxyisobutyrate de 91.1 0.16 5.5E-06 44.2 3.9 32 9-40 3-34 (287)
467 1ldn_A L-lactate dehydrogenase 91.1 0.23 7.8E-06 44.0 4.9 39 1-40 1-41 (316)
468 2bcg_G Secretory pathway GDP d 91.0 0.11 3.6E-06 48.8 2.8 34 186-219 11-44 (453)
469 3gpi_A NAD-dependent epimerase 91.0 0.28 9.7E-06 42.5 5.4 33 8-40 4-36 (286)
470 3phh_A Shikimate dehydrogenase 91.0 0.24 8.3E-06 42.5 4.8 34 7-40 118-151 (269)
471 2e4g_A Tryptophan halogenase; 91.0 0.17 5.7E-06 48.7 4.2 34 186-219 25-61 (550)
472 1pjq_A CYSG, siroheme synthase 91.0 0.19 6.4E-06 47.1 4.5 34 7-40 12-45 (457)
473 3hwr_A 2-dehydropantoate 2-red 91.0 0.21 7E-06 44.3 4.5 33 7-40 19-51 (318)
474 2uyy_A N-PAC protein; long-cha 91.0 0.28 9.4E-06 43.4 5.4 33 8-40 31-63 (316)
475 3fwz_A Inner membrane protein 91.0 0.13 4.5E-06 39.3 2.9 34 186-219 7-40 (140)
476 2aqj_A Tryptophan halogenase, 91.0 0.14 4.9E-06 49.0 3.8 34 186-219 5-41 (538)
477 1zcj_A Peroxisomal bifunctiona 91.0 0.19 6.3E-06 47.2 4.4 33 8-40 38-70 (463)
478 3ego_A Probable 2-dehydropanto 90.9 0.21 7.1E-06 44.0 4.5 32 8-40 3-34 (307)
479 3c4n_A Uncharacterized protein 90.9 0.12 4.2E-06 47.5 3.0 33 187-219 37-71 (405)
480 2qyt_A 2-dehydropantoate 2-red 90.8 0.15 5.1E-06 45.1 3.5 32 7-38 8-45 (317)
481 1s3e_A Amine oxidase [flavin-c 90.8 0.11 3.6E-06 49.7 2.6 34 186-219 4-37 (520)
482 2ivd_A PPO, PPOX, protoporphyr 90.7 0.11 3.7E-06 48.9 2.7 34 186-219 16-49 (478)
483 3axb_A Putative oxidoreductase 90.7 0.14 4.9E-06 47.7 3.4 32 186-217 23-55 (448)
484 3pqe_A L-LDH, L-lactate dehydr 90.7 0.24 8.3E-06 43.9 4.7 34 7-40 5-40 (326)
485 1mv8_A GMD, GDP-mannose 6-dehy 90.7 0.18 6.2E-06 46.9 4.0 32 9-40 2-33 (436)
486 1lss_A TRK system potassium up 90.7 0.16 5.4E-06 38.5 3.1 34 186-219 4-37 (140)
487 3llv_A Exopolyphosphatase-rela 90.7 0.14 4.7E-06 39.2 2.7 34 186-219 6-39 (141)
488 2eez_A Alanine dehydrogenase; 90.6 0.27 9.1E-06 44.6 5.0 34 7-40 166-199 (369)
489 1txg_A Glycerol-3-phosphate de 90.6 0.2 7E-06 44.6 4.2 30 9-38 2-31 (335)
490 1nyt_A Shikimate 5-dehydrogena 90.5 0.27 9.3E-06 42.4 4.8 34 7-40 119-152 (271)
491 3ic5_A Putative saccharopine d 90.5 0.13 4.3E-06 37.7 2.3 34 186-219 5-39 (118)
492 1guz_A Malate dehydrogenase; o 90.5 0.25 8.5E-06 43.6 4.6 32 9-40 2-35 (310)
493 1jay_A Coenzyme F420H2:NADP+ o 90.5 0.27 9.2E-06 40.5 4.6 32 9-40 2-34 (212)
494 2zyd_A 6-phosphogluconate dehy 90.5 0.25 8.4E-06 46.5 4.8 34 7-40 15-48 (480)
495 3gvi_A Malate dehydrogenase; N 90.5 0.28 9.7E-06 43.4 4.9 34 7-40 7-41 (324)
496 2weu_A Tryptophan 5-halogenase 90.5 0.14 4.9E-06 48.7 3.2 33 187-219 3-38 (511)
497 2vhw_A Alanine dehydrogenase; 90.5 0.28 9.6E-06 44.6 5.0 34 7-40 168-201 (377)
498 4e4t_A Phosphoribosylaminoimid 90.4 0.33 1.1E-05 44.9 5.5 34 7-40 35-68 (419)
499 1zud_1 Adenylyltransferase THI 90.3 0.24 8.1E-06 42.2 4.1 34 7-40 28-62 (251)
500 2i6t_A Ubiquitin-conjugating e 90.3 0.25 8.5E-06 43.4 4.3 34 7-40 14-49 (303)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=3.3e-42 Score=318.71 Aligned_cols=340 Identities=21% Similarity=0.362 Sum_probs=266.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
++||+|||||++|+++|..|+++|++|+|||+.+.+||.|.. .|+.+.+..+...+.++..+.+.+...++++.++.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999985 4888888888888888877777777788899999999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+.++++++++.+ +++++|++++.++ +.|. |++.+ ..++||+||+|||.++.|..|.++|...+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~---------g~~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG---------RQWLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS---------CEEEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC---------CEEEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999999886 9999999999876 6788 77654 67899999999998888989999999888
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhH--HHHHHHhhcCChhhH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV--YLGLVLLRYVPCGGV 243 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~--~~~~~~~~~~~~~~~ 243 (395)
.+..+++..+.....+.+++++|||+|.+|+|+|..|++.+ +|+++.|++.+++|.... .+...+...+ .
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~----~ 217 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERW----K 217 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC----------
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHH----h
Confidence 77888888888877778999999999999999999999998 699999986577766532 1111111100 0
Q ss_pred HHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecCceEEeCCeEEecCCcEEeCcEE
Q 016088 244 DTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSI 323 (395)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~v~~~~g~~~~~D~v 323 (395)
... ...+. .........+.+...+.+.++.+.+.....+++++.+++.+++|+++++|.|
T Consensus 218 ~~~-------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~v 277 (357)
T 4a9w_A 218 AQQ-------------EGREP-------DLPPGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAV 277 (357)
T ss_dssp ------------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEE
T ss_pred ccc-------------cccCC-------CcccccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEE
Confidence 000 00000 0000001123444455566666666665558999999999999999999999
Q ss_pred EEccCCCCCccccccCCCCccCCCCCCCCCCC-CcccCCCCeEEEe--cccc----cccCccHHHHHHHHHhhcccC
Q 016088 324 VFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYP-NHWKGKNGLYCVG--LSRK----GLYGAAADAQNIADHINSILS 393 (395)
Q Consensus 324 i~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~vya~G--d~~~----~~~~a~~~a~~~a~~i~~~l~ 393 (395)
|+|+|++|+.+ ++... ++.+++|++.+|+. .++++.|||||+| |+++ ....|..+|+.+|++|.+.|.
T Consensus 278 i~a~G~~p~~~-~l~~~-gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 278 IWCTGFRPALS-HLKGL-DLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp EECCCBCCCCG-GGTTT-TCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred EECCCcCCCCc-ccCcc-cccCCCCCccccCCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999984 55555 34488999999954 3789999999999 5654 244899999999999998874
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=7.9e-42 Score=325.73 Aligned_cols=309 Identities=19% Similarity=0.359 Sum_probs=247.7
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCC---eEEEecCCCCCcccccC---------------CCCceeeccccccccCC
Q 016088 8 VEVIIVGAGPSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~~~~---v~vie~~~~~gg~~~~~---------------~~~~l~~~~~~~~~~~~ 66 (395)
+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||+|... .|+.+..+.+...+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999752 45566666666666666
Q ss_pred CCCCCC----CCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEE
Q 016088 67 HLPFPS----SYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (395)
Q Consensus 67 ~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vV 142 (395)
.++++. +...++++.++.+++.++++++++..+++++++|++++..++.+.|.|++.+... ++. .++.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~-g~~--~~~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT-DTI--YSEEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC-Cce--EEEEcCEEE
Confidence 554432 2256788999999999999999987556999999999987755589999876321 122 578999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcc
Q 016088 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHV 222 (395)
Q Consensus 143 lAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~ 222 (395)
+|||.++.|+.|.++|.+.+ .+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.|.+|+++.|++. .
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~-~ 232 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA-P 232 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC-C
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC-C
Confidence 99999999999999999888 7888999988877777899999999999999999999999999999998872 1
Q ss_pred cchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecCc
Q 016088 223 LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGI 302 (395)
Q Consensus 223 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v 302 (395)
++.. ...+|+++..|
T Consensus 233 ~~~~-----------------------------------------------------------------~~~~V~~~~~V 247 (464)
T 2xve_A 233 MGYK-----------------------------------------------------------------WPENWDERPNL 247 (464)
T ss_dssp CCCC-----------------------------------------------------------------CCTTEEECSCE
T ss_pred CCCC-----------------------------------------------------------------CCCceEEcCCe
Confidence 0000 01467777568
Q ss_pred eEEeCCeEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCC--CCcccCCCCeEEEecccccc--cCcc
Q 016088 303 ESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSY--PNHWKGKNGLYCVGLSRKGL--YGAA 378 (395)
Q Consensus 303 ~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~vya~Gd~~~~~--~~a~ 378 (395)
+++++++|.++||+++++|.||+|||++|+++.+....+...+++|++ ++. ..+.++.|+|||+||+.... ..+.
T Consensus 248 ~~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~~~l~~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~ 326 (464)
T 2xve_A 248 VRVDTENAYFADGSSEKVDAIILCTGYIHHFPFLNDDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQWYSFNMFD 326 (464)
T ss_dssp EEECSSEEEETTSCEEECSEEEECCCBCCCCTTBCTTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCSSCHHHHH
T ss_pred EEEeCCEEEECCCCEEeCCEEEECCCCCCCCCCcCcccccccCCCccc-ccccceEecCCCCCEEEEeCcccccchHHHH
Confidence 999888999999999999999999999999865544332223444455 331 23458899999999997653 3888
Q ss_pred HHHHHHHHHhhccc
Q 016088 379 ADAQNIADHINSIL 392 (395)
Q Consensus 379 ~~a~~~a~~i~~~l 392 (395)
.||++++++|.+.+
T Consensus 327 ~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 327 AQAWYARDVIMGRL 340 (464)
T ss_dssp HHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHcCCC
Confidence 99999999998875
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=2.6e-42 Score=333.57 Aligned_cols=361 Identities=20% Similarity=0.333 Sum_probs=274.9
Q ss_pred CCeEEEECCChHHHHHHHHHh-hcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCC----CCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~-~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|+ +.|.+|+|||+++.+||+|..+.|++..++.+...+.+...+ ...+...++++.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 589999999999999999999 899999999999999999999999999999988877765321 123334577889
Q ss_pred HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc
Q 016088 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (395)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~ 161 (395)
++.+++.+.++++++..+++++++|++++.+++.+.|.|++.++ ..++||+||+|||.++.|..|+++|.+.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--------EVYRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--------CEEEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--------CEEEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999865669999999999988667899998775 6789999999999989999999999999
Q ss_pred cccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCC--
Q 016088 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP-- 239 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~-- 239 (395)
+ .+..+|+..+.......+|+|+|||+|.+|+|+|..|++.+.+||++.|++.|++|..+..+.......+.
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~ 233 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKAD 233 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHT
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhc
Confidence 8 88999999998877788999999999999999999999999999999999988888665433222211110
Q ss_pred --hh---------------------------hHHHHHHHHH---------------------------------HHHhcc
Q 016088 240 --CG---------------------------GVDTLMVMLS---------------------------------RLVYGD 257 (395)
Q Consensus 240 --~~---------------------------~~~~~~~~~~---------------------------------~~~~~~ 257 (395)
.. ....+...+. +..+.+
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d 313 (540)
T 3gwf_A 234 YDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIED 313 (540)
T ss_dssp HHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 00 0000000000 001111
Q ss_pred hhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEe---cC-ceEEeCCeEEecCCcEEeCcEEEEccCCCCCc
Q 016088 258 LSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRST 333 (395)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~ 333 (395)
.....+ ..| . ...++.+.+..++.+.+.+.+|+++ .. |+++++++|.++||+++++|+||+|||+.++.
T Consensus 314 p~~~~~----l~P--~-~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 314 PETARK----LMP--K-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp HHHHHH----HCC--C-SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSS
T ss_pred HHHHHh----CCC--C-CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccc
Confidence 111111 111 1 4567788899999999999999999 45 99999999999999999999999999999986
Q ss_pred cccccCCCCccCCCCC---------CCCCCCCcccCCCCeEEE-ecccc---cccCccHHHHHHHHHhhc
Q 016088 334 NVWLKGDDSMLNDDGI---------PKQSYPNHWKGKNGLYCV-GLSRK---GLYGAAADAQNIADHINS 390 (395)
Q Consensus 334 ~~~~~~~~~~~~~~g~---------~~~~~~~~~~~~~~vya~-Gd~~~---~~~~a~~~a~~~a~~i~~ 390 (395)
. ++... .+..++|. +..-......+.||+|++ |..+. .+..+..|+.++++.|..
T Consensus 387 ~-~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~ 454 (540)
T 3gwf_A 387 G-NYRRI-EIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGY 454 (540)
T ss_dssp H-HHHTS-EEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHH
T ss_pred c-CcCcc-eEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 2 22222 22222332 222222344689999999 87543 244778888888887754
No 4
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=1.9e-41 Score=327.87 Aligned_cols=363 Identities=19% Similarity=0.257 Sum_probs=267.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCC----CCCCCCCCCHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (395)
.++||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|++..++.+...+.+...+. ..+...+++..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35899999999999999999999999999999999999999999999999998877776542221 23445678899
Q ss_pred HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc
Q 016088 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (395)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~ 161 (395)
++.+|+.+.++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|+|.++.|..|+++|.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE--------EVVTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT--------EEEEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999866679999999999987667899999875 7899999999999988999999999999
Q ss_pred cccCCCCCcceeecccCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHH
Q 016088 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (395)
| .+..+|+..+... ....+|+|+|||+|.+|+|+|..|++.+.+||++.|++.|++|..+..+....
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 233 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEK 233 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHH
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHH
Confidence 8 8889999988776 66779999999999999999999999999999999999888886544222211
Q ss_pred hhcC----Chhh---------------------------HHHHHHHH-------------------------HH------
Q 016088 235 LRYV----PCGG---------------------------VDTLMVML-------------------------SR------ 252 (395)
Q Consensus 235 ~~~~----~~~~---------------------------~~~~~~~~-------------------------~~------ 252 (395)
...+ |... ...+...+ ..
T Consensus 234 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (545)
T 3uox_A 234 MDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI 313 (545)
T ss_dssp HHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 1110 0000 00000000 00
Q ss_pred -HHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEe---cC-ceEEeCCeEEecCCcEEeCcEEEEcc
Q 016088 253 -LVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCT 327 (395)
Q Consensus 253 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~at 327 (395)
..+.+........|. .....++.+.+..++.+.+++.+|+++ .. |+++++++|.++|| ++++|+||+||
T Consensus 314 ~~~v~d~~~~~~l~P~-----~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~AT 387 (545)
T 3uox_A 314 RQRVKDPVVAEKLIPK-----DHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYAT 387 (545)
T ss_dssp HHHCSCHHHHHHTSCS-----SSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECC
T ss_pred HHHcCCHHHHHhCCCC-----CCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECC
Confidence 000111111111110 112345667788999999999999999 45 99999999999999 99999999999
Q ss_pred CCCCCccccccCCCCccCCCCCCCCC---------CCCcccCCCCeEEEe-cccc-----cccCccHHHHHHHHHhhc
Q 016088 328 GFKRSTNVWLKGDDSMLNDDGIPKQS---------YPNHWKGKNGLYCVG-LSRK-----GLYGAAADAQNIADHINS 390 (395)
Q Consensus 328 G~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~vya~G-d~~~-----~~~~a~~~a~~~a~~i~~ 390 (395)
|+.+++. ++... .+..++|..+.+ ...+..+.||+|++. .-+. .+..+..|+.++++.|..
T Consensus 388 Gf~~~~~-~~~~~-~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 463 (545)
T 3uox_A 388 GFDAVTG-SLDRI-DIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISY 463 (545)
T ss_dssp CCBSSSC-SCTTS-EEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc-cCCCc-eEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 9998653 32222 233344433221 123346889999984 3322 134777888888887754
No 5
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=5.9e-41 Score=324.74 Aligned_cols=367 Identities=22% Similarity=0.323 Sum_probs=270.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCC----CCCCCCCCCCHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (395)
++||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+.|++..++++...+.+...+ ...+...+.++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 579999999999999999999999999999999999999999999999999998887765331 2234456789999
Q ss_pred HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016088 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (395)
Q Consensus 83 ~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~ 162 (395)
+.+|+.+.++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|||.++.|..|+++|.+.+
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--------~~i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--------DEVSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999866679999999999988667899998765 67899999999998889999999999998
Q ss_pred ccCCCCCcceeecccCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCC--
Q 016088 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP-- 239 (395)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~-- 239 (395)
.+..+|+..+. +...+.+|+|+|||+|.+|+|+|..|++.+.+|+++.|++.|++|..+..+.......+.
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~ 246 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKAN 246 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHT
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhc
Confidence 88899999888 567778999999999999999999999999999999999988888765543332222111
Q ss_pred --hhh--------------------------H-HHHHHHHH-----------------------HHHhcchhhcCCCCCC
Q 016088 240 --CGG--------------------------V-DTLMVMLS-----------------------RLVYGDLSKYGIHKPR 267 (395)
Q Consensus 240 --~~~--------------------------~-~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 267 (395)
... . ..+...+. ..+.....+..+.++.
T Consensus 247 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~ 326 (549)
T 4ap3_A 247 YAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPA 326 (549)
T ss_dssp HHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHH
T ss_pred cHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHH
Confidence 000 0 00000000 0000000000011110
Q ss_pred CCcch---hhccCCCceeeCchhhhhhcCCcEEEe---cC-ceEEeCCeEEecCCcEEeCcEEEEccCCCCCccccccCC
Q 016088 268 EGPFF---MKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKGD 340 (395)
Q Consensus 268 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~ 340 (395)
..... .....++.+.+..++.+.+.+.+|+++ .. |+++++++|.++|| ++++|+||+|||+.++.. ++...
T Consensus 327 ~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~-~~~~~ 404 (549)
T 4ap3_A 327 VAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTG-SLDKL 404 (549)
T ss_dssp HHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESST-TGGGS
T ss_pred HHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCccccccc-ccCce
Confidence 00000 023446677888999999999999999 66 99999999999999 999999999999998752 22222
Q ss_pred CCccCCCCCC---------CCCCCCcccCCCCeEEE-ecccc-----cccCccHHHHHHHHHhhc
Q 016088 341 DSMLNDDGIP---------KQSYPNHWKGKNGLYCV-GLSRK-----GLYGAAADAQNIADHINS 390 (395)
Q Consensus 341 ~~~~~~~g~~---------~~~~~~~~~~~~~vya~-Gd~~~-----~~~~a~~~a~~~a~~i~~ 390 (395)
.+..++|.. ..-......+.||+|.+ |..+. .+..+..|+.++++.|..
T Consensus 405 -~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~ 468 (549)
T 4ap3_A 405 -EIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAY 468 (549)
T ss_dssp -EEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred -eEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 223333322 22212334689999997 55432 144777888888887754
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=7e-41 Score=325.47 Aligned_cols=365 Identities=21% Similarity=0.314 Sum_probs=271.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCC----CCCCCCCCCHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (395)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|..+.|+++.++.+...+.+...+. ..+...++++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35899999999999999999999999999999999999999999999998888776665542220 12334578899
Q ss_pred HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc
Q 016088 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS 161 (395)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~ 161 (395)
++.+|+..+++++++..+++++++|++++.+++.+.|.|++.++ .+++||+||+|+|.++.|..|+++|.+.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--------~~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG--------DRIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC--------CEEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC--------CEEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 99999999999998777779999999999987667899988764 6789999999999999999999999998
Q ss_pred cccCCCCCcceeecccCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHH----HHHhh
Q 016088 162 FCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLG----LVLLR 236 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~----~~~~~ 236 (395)
+ .|..+|+..+. +..++.+|+++|||+|.+|+|++..+++.+.+|+++.|++.+++|..+.... ..+..
T Consensus 167 f------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (542)
T 1w4x_A 167 F------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKK 240 (542)
T ss_dssp C------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHT
T ss_pred C------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHh
Confidence 8 88899998887 4456679999999999999999999999999999999999887775432111 11111
Q ss_pred cCCh--------------------------hhHHHHHHH-H------------------------HH-------HHhcch
Q 016088 237 YVPC--------------------------GGVDTLMVM-L------------------------SR-------LVYGDL 258 (395)
Q Consensus 237 ~~~~--------------------------~~~~~~~~~-~------------------------~~-------~~~~~~ 258 (395)
.+|. .....+... + .. ..+.+.
T Consensus 241 ~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (542)
T 1w4x_A 241 RYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDP 320 (542)
T ss_dssp THHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSH
T ss_pred hCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCH
Confidence 0000 000000000 0 00 000111
Q ss_pred hhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEe---cC-ceEEeCCeEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 259 SKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVL---PG-IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~-v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
.......|. .....++.+.++.++.+.+.+++|+++ .. |+++++++|.++| +++++|+||+|||+.++..
T Consensus 321 ~~~~~l~P~-----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~ 394 (542)
T 1w4x_A 321 EVAERLVPK-----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTG 394 (542)
T ss_dssp HHHHHHSCC-----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTH
T ss_pred HHHHhcCCC-----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCcccccc
Confidence 111111110 123457788999999999999999997 44 9999999999999 9999999999999999763
Q ss_pred ccccCCCCccCCCCCCCCC---------CCCcccCCCCeEEE-ecccc----c-ccCccHHHHHHHHHhhccc
Q 016088 335 VWLKGDDSMLNDDGIPKQS---------YPNHWKGKNGLYCV-GLSRK----G-LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 335 ~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~vya~-Gd~~~----~-~~~a~~~a~~~a~~i~~~l 392 (395)
+.... .+..++|..+.+ ......+.||+|++ |+.+. + +..+..|+++++++|.+..
T Consensus 395 -~~~~~-~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~ 465 (542)
T 1w4x_A 395 -ALFKI-DIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMF 465 (542)
T ss_dssp -HHHTS-EEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CcCce-eeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 33332 334444544332 11333578999998 99843 1 3478899999999987643
No 7
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=4.2e-39 Score=306.41 Aligned_cols=308 Identities=23% Similarity=0.366 Sum_probs=235.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCcccccCC---------------------------------C
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYS---------------------------------Y 51 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~~~~~---------------------------------~ 51 (395)
.+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.... |
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 6899999999999999999999999 9999999999999997542 2
Q ss_pred CceeeccccccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCc-
Q 016088 52 DRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR- 130 (395)
Q Consensus 52 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~- 130 (395)
+.+..+.+...+.+..++++.....++++.++.+++.+++++++..+ +++++|++++... +.|.|++.+... ++
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i--~~~t~V~~v~~~~--~~~~V~~~~~~~-G~~ 160 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFI--KLATDVLDIEKKD--GSWVVTYKGTKA-GSP 160 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGE--ECSEEEEEEEEET--TEEEEEEEESST-TCC
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeE--EeCCEEEEEEeCC--CeEEEEEeecCC-CCe
Confidence 22333334444455555666666678889999999999998876544 8999999998865 679998876211 11
Q ss_pred eeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcC
Q 016088 131 VIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAA 210 (395)
Q Consensus 131 ~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~ 210 (395)
. ..++||+||+|||.++.|+.|.++|.+.+.. ...+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+.
T Consensus 161 ~--~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~--~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 161 I--SKDIFDAVSICNGHYEVPYIPNIKGLDEYAK--AVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp E--EEEEESEEEECCCSSSSBCBCCCBTHHHHHH--HSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred e--EEEEeCEEEECCCCCCCCCCCCCCChhhhhc--cCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 1 4799999999999888999999999875300 00356888888887777789999999999999999999999999
Q ss_pred e-eEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhh
Q 016088 211 K-TSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCE 289 (395)
Q Consensus 211 ~-v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (395)
+ |+++.|++.+
T Consensus 237 ~~V~l~~r~~~~-------------------------------------------------------------------- 248 (447)
T 2gv8_A 237 HPIYQSLLGGGD-------------------------------------------------------------------- 248 (447)
T ss_dssp SSEEEECTTCCS--------------------------------------------------------------------
T ss_pred CcEEEEeCCCCc--------------------------------------------------------------------
Confidence 9 9999987721
Q ss_pred hhcCCcEEEecCceEEe--CCeEEecCCcE-EeCcEEEEccCCCCCcccc----ccCCCCccCCCCCCCCCCCCc--ccC
Q 016088 290 KIKSGQIQVLPGIESIR--GNEVIFENGHS-HHFDSIVFCTGFKRSTNVW----LKGDDSMLNDDGIPKQSYPNH--WKG 360 (395)
Q Consensus 290 ~~~~~~i~~~~~v~~~~--~~~v~~~~g~~-~~~D~vi~atG~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~--~~~ 360 (395)
+...+|.+...|++++ +..|+++||+. +++|.||+|||++|+++.+ +.....-+..++...++.... .++
T Consensus 249 -l~~~~i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~ 327 (447)
T 2gv8_A 249 -IQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIP 327 (447)
T ss_dssp -CBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCSTTTCCCSSSSSCCSEETTTEETT
T ss_pred -CCCCCeEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccccccCceecCCCcccccccccccCC
Confidence 2334666655588884 45799999987 6999999999999998651 333211222345555552111 268
Q ss_pred CCCeEEEeccccc--ccCccHHHHHHHHHhhccc
Q 016088 361 KNGLYCVGLSRKG--LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 361 ~~~vya~Gd~~~~--~~~a~~~a~~~a~~i~~~l 392 (395)
.|+||++||+... ...|..||+++|++|.+.+
T Consensus 328 ~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 328 DPTLAFVGLALHVVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp CTTEEESSCCBSSCHHHHHHHHHHHHHHHHTTSS
T ss_pred CCcEEEEeccccccCchHHHHHHHHHHHHHcCCC
Confidence 8999999999765 3378899999999998875
No 8
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=3.6e-38 Score=288.79 Aligned_cols=298 Identities=17% Similarity=0.307 Sum_probs=230.4
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCH
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
|.+....+||+|||||++|+++|..|+++|++|+|||+.+.+||.|... |+...+. .++..+ ..+.
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~~------~~~~~~-------~~~~ 66 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYIY------DVAGFP-------KIRA 66 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEEC------CSTTCS-------SEEH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceEe------ccCCCC-------CCCH
Confidence 4433345899999999999999999999999999999999999998531 2222111 111111 1357
Q ss_pred HHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCCc
Q 016088 81 AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRGL 159 (395)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~-~p~~~~~~g~ 159 (395)
.++..++.+.++++++.+ +++++|++++... .+.|.|.+.+ ..+.||+||+|||..+ .|..|+++|.
T Consensus 67 ~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~~d~vVlAtG~~~~~p~~~~~~g~ 134 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTI--CLEQAVESVEKQA-DGVFKLVTNE---------ETHYSKTVIITAGNGAFKPRKLELENA 134 (332)
T ss_dssp HHHHHHHHHHHTTSCCEE--ECSCCEEEEEECT-TSCEEEEESS---------EEEEEEEEEECCTTSCCEECCCCCTTG
T ss_pred HHHHHHHHHHHHHhCCcE--EccCEEEEEEECC-CCcEEEEECC---------CEEEeCEEEECCCCCcCCCCCCCCCCh
Confidence 899999999999888765 8899999999875 2478898876 4499999999999533 8888899998
Q ss_pred cccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCC
Q 016088 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVP 239 (395)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~ 239 (395)
+.+ .+..+++ .+.+...+++++++|||+|.+|+|+|..|++.+.+|+++.+++. +.+...
T Consensus 135 ~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~-~~~~~~------------ 194 (332)
T 3lzw_A 135 EQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK-FRAHEH------------ 194 (332)
T ss_dssp GGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS-CSSCHH------------
T ss_pred hhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc-CCccHH------------
Confidence 876 5556665 56565666789999999999999999999999999999998872 211110
Q ss_pred hhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe----EEec
Q 016088 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----VIFE 313 (395)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~----v~~~ 313 (395)
..+.+++.+|+++.+ +.+++.++ +.++
T Consensus 195 -----------------------------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~ 227 (332)
T 3lzw_A 195 -----------------------------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLE 227 (332)
T ss_dssp -----------------------------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEE
T ss_pred -----------------------------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEE
Confidence 122355678899887 88887764 8887
Q ss_pred C-----CcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc---c---ccCccHHHH
Q 016088 314 N-----GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK---G---LYGAAADAQ 382 (395)
Q Consensus 314 ~-----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~---~---~~~a~~~a~ 382 (395)
+ ++++++|.||+|+|+.|+.+ ++... ++..++|++.+| +.++++.|||||+|||+. . ...|..+|.
T Consensus 228 ~~~~g~~~~~~~D~vv~a~G~~p~~~-~~~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~ 304 (332)
T 3lzw_A 228 EVKGDRKEILEIDDLIVNYGFVSSLG-PIKNW-GLDIEKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAP 304 (332)
T ss_dssp ETTSCCEEEEECSEEEECCCEECCCG-GGGGS-SCCEETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHH
T ss_pred ecCCCceEEEECCEEEEeeccCCCch-HHhhc-CccccCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHH
Confidence 6 46789999999999999984 55554 233378999999 577789999999999973 3 238899999
Q ss_pred HHHHHhhcccCC
Q 016088 383 NIADHINSILSP 394 (395)
Q Consensus 383 ~~a~~i~~~l~~ 394 (395)
.+|++|.+.|.+
T Consensus 305 ~aa~~i~~~l~~ 316 (332)
T 3lzw_A 305 TAVNNAKAYMDP 316 (332)
T ss_dssp HHHHHHHHHHCT
T ss_pred HHHHHHHHhhCh
Confidence 999999988754
No 9
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=6e-37 Score=279.85 Aligned_cols=287 Identities=19% Similarity=0.290 Sum_probs=216.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|+++|++|+|||+. .+||.|..... ...++. ++...+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHHH
Confidence 589999999999999999999999999999998 67887764210 001111 1123467889999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCC-cEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATN-MWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+.+.++++++++ +. ++|++++...... .|.|.+.++ ..++||+||+||| +.|..|+++|.+.+
T Consensus 71 l~~~~~~~gv~~--~~-~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~i~g~~~~--- 134 (325)
T 2q7v_A 71 MHQQAEKFGAKV--EM-DEVQGVQHDATSHPYPFTVRGYN--------GEYRAKAVILATG--ADPRKLGIPGEDNF--- 134 (325)
T ss_dssp HHHHHHHTTCEE--EE-CCEEEEEECTTSSSCCEEEEESS--------CEEEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--Ee-eeEEEEEeccCCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999999988875 55 7899998762112 377777654 6799999999999 67888888888765
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (395)
.+..+++..+.+.....+++++|||+|.+|+|+|..|.+.|.+|+++.|++. +.+.
T Consensus 135 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~~~-------------------- 190 (325)
T 2q7v_A 135 ---WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT-LRAN-------------------- 190 (325)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS-CCSC--------------------
T ss_pred ---cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc-CCcc--------------------
Confidence 4444554433333344579999999999999999999999999999998873 1110
Q ss_pred HHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhh-cCCcEEEecC--ceEEeCC----eEEec---CC
Q 016088 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN----EVIFE---NG 315 (395)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--v~~~~~~----~v~~~---~g 315 (395)
..+.+.+ ++.+|+++.+ ++++..+ +|.++ +|
T Consensus 191 ---------------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g 231 (325)
T 2q7v_A 191 ---------------------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTG 231 (325)
T ss_dssp ---------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTC
T ss_pred ---------------------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCC
Confidence 0011223 3468999887 7777755 57776 67
Q ss_pred c--EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHHHHhh
Q 016088 316 H--SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHIN 389 (395)
Q Consensus 316 ~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~ 389 (395)
+ ++++|.||+|+|++||.+ ++... ...+++|++.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|.
T Consensus 232 ~~~~i~~D~vi~a~G~~p~~~-~l~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (325)
T 2q7v_A 232 EVSELATDGVFIFIGHVPNTA-FVKDT-VSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTE 308 (325)
T ss_dssp CEEEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEcCEEEEccCCCCChH-HHhhh-cccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHH
Confidence 5 689999999999999984 55444 345778999999 4677999999999999865 2389999999999998
Q ss_pred ccc
Q 016088 390 SIL 392 (395)
Q Consensus 390 ~~l 392 (395)
+.|
T Consensus 309 ~~l 311 (325)
T 2q7v_A 309 RQL 311 (325)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 10
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=3.5e-37 Score=281.05 Aligned_cols=284 Identities=17% Similarity=0.256 Sum_probs=221.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|+++|++|+|||+. .||.|.... ..+.++.. ...+..++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCC-------CCCCHHHHHHH
Confidence 479999999999999999999999999999998 888877521 01111111 11456889999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.++++++++ +. ++|++++.+. +.|.+.+.++ ..+.||+||+||| +.|..|+++|.+.+
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK--------GEFKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS--------CEEEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC--------CEEEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999998876 66 9999998865 6788888764 6889999999999 66888889988876
Q ss_pred CCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHH
Q 016088 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.+..++...+.+.....+++++|+|+|.+|+|+|..|.+.+.+|+++.+++ .+++..
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~~-------------------- 193 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKAQP-------------------- 193 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCSCH--------------------
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCcCH--------------------
Confidence 555555554444455568999999999999999999999999999999987 222210
Q ss_pred HHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhh-hhcCCcEEEecC--ceEEeCC----eEEecC---Cc
Q 016088 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCE-KIKSGQIQVLPG--IESIRGN----EVIFEN---GH 316 (395)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--v~~~~~~----~v~~~~---g~ 316 (395)
.+.+ ..++.+|+++.+ +.+++.+ .+.+.+ |+
T Consensus 194 ---------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~ 234 (323)
T 3f8d_A 194 ---------------------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGE 234 (323)
T ss_dssp ---------------------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCC
T ss_pred ---------------------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCc
Confidence 0122 234458999988 8888766 477776 76
Q ss_pred --EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc------ccCccHHHHHHHHHh
Q 016088 317 --SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADHI 388 (395)
Q Consensus 317 --~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~~i 388 (395)
++++|.||+|+|+.|+.+ +++..+...+++|++.+| +.++++.|||||+|||+.. ...|..+|..+|.+|
T Consensus 235 ~~~~~~D~vv~a~G~~p~~~-~~~~~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 312 (323)
T 3f8d_A 235 IKELNVNGVFIEIGFDPPTD-FAKSNGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSA 312 (323)
T ss_dssp EEEEECSEEEECCCEECCHH-HHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHH
T ss_pred eEEEEcCEEEEEECCCCChh-HHhhcCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHH
Confidence 789999999999999974 555553455788999999 5778899999999999874 238999999999999
Q ss_pred hccc
Q 016088 389 NSIL 392 (395)
Q Consensus 389 ~~~l 392 (395)
.+.|
T Consensus 313 ~~~l 316 (323)
T 3f8d_A 313 YRYV 316 (323)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 11
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.6e-37 Score=278.61 Aligned_cols=281 Identities=16% Similarity=0.202 Sum_probs=219.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
+||+|||||++|+++|..|+++|++|+|||+.+..+..+... ..++. ....+..++.+++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-------------~~~~~-------~~~~~~~~~~~~~ 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-------------HGFLG-------QDGKAPGEIIAEA 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-------------CSSTT-------CTTCCHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-------------cCCcC-------CCCCCHHHHHHHH
Confidence 799999999999999999999999999999876433221110 00110 1245678999999
Q ss_pred HHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 88 DHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 88 ~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
.+.+.++ ++. ..+++|++++.++ +.|.|.+.++ ..++||+||+||| +.|+.|.++|.+.+
T Consensus 63 ~~~~~~~~~v~---~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~d~vviAtG--~~~~~~~~~g~~~~---- 123 (297)
T 3fbs_A 63 RRQIERYPTIH---WVEGRVTDAKGSF--GEFIVEIDGG--------RRETAGRLILAMG--VTDELPEIAGLRER---- 123 (297)
T ss_dssp HHHHTTCTTEE---EEESCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--CEEECCCCBTTGGG----
T ss_pred HHHHHhcCCeE---EEEeEEEEEEEcC--CeEEEEECCC--------CEEEcCEEEECCC--CCCCCCCCCCchhh----
Confidence 9988887 444 4567999999876 6688888765 6799999999999 67888889998876
Q ss_pred CCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHH
Q 016088 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.+...+...+.+....++++++|||+|.+|+|+|..|.+.| +|+++.+++..
T Consensus 124 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~------------------------- 175 (297)
T 3fbs_A 124 --WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE------------------------- 175 (297)
T ss_dssp --BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC-------------------------
T ss_pred --cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC-------------------------
Confidence 55556655555555567899999999999999999999998 99999887620
Q ss_pred HHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC-eEEecCCcEEeCcEEE
Q 016088 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-EVIFENGHSHHFDSIV 324 (395)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~-~v~~~~g~~~~~D~vi 324 (395)
+...+.+.+++.+|+++.. +.+++.+ .+.+++|+++++|.||
T Consensus 176 ------------------------------------~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi 219 (297)
T 3fbs_A 176 ------------------------------------PDADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLF 219 (297)
T ss_dssp ------------------------------------CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEE
T ss_pred ------------------------------------CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEE
Confidence 1112244566678888866 8888887 7999999999999999
Q ss_pred EccCCCCCccccccCCCCccC--CCC-CCCCCCCCcccCCCCeEEEecccccc---cCccHHHHHHHHHhhcccC
Q 016088 325 FCTGFKRSTNVWLKGDDSMLN--DDG-IPKQSYPNHWKGKNGLYCVGLSRKGL---YGAAADAQNIADHINSILS 393 (395)
Q Consensus 325 ~atG~~~~~~~~~~~~~~~~~--~~g-~~~~~~~~~~~~~~~vya~Gd~~~~~---~~a~~~a~~~a~~i~~~l~ 393 (395)
+|+|+.|+.+ +++..+...+ +.| ++.+| +.++++.|||||+|||++.+ ..|..+|+.+|.+|.+.|.
T Consensus 220 ~a~G~~p~~~-~~~~~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 220 TQPKLRITVD-WIEKLGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp ECCEEECCCS-CHHHHTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EccCcccCch-hHHhcCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHh
Confidence 9999999984 5544422233 457 88888 56789999999999998753 3899999999999998873
No 12
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=5.7e-37 Score=278.26 Aligned_cols=285 Identities=21% Similarity=0.299 Sum_probs=215.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+||+|||||++|+++|..|+++|+ +|+|||+. ..||.|..... ...++. ++...+..++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCC------CcccCCHHHHHHH
Confidence 699999999999999999999999 99999995 57777654210 001111 1224577889999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.+.++++++ +. ++|++++.+. +.|.+.+.++ ..++||+||+||| +.|..|+++|.+.+
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG--------KTFEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC--------CEEECCEEEECCC--CCCCCCCCCChhhc----
Confidence 999898888775 65 7899998865 5677876554 6799999999999 77888888887765
Q ss_pred CCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHH
Q 016088 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.+..+++....+.....+++++|||+|.+|+|+|..|.+.|.+|+++.|++... ..
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-~~--------------------- 181 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-CA--------------------- 181 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-SC---------------------
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-CC---------------------
Confidence 444444433333333457999999999999999999999999999999887311 00
Q ss_pred HHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhh-cCCcEEEecC--ceEEeCC-----eEEec---CC
Q 016088 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIRGN-----EVIFE---NG 315 (395)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--v~~~~~~-----~v~~~---~g 315 (395)
..+.+.+ ++.+|+++.+ +.+++.+ .+.++ +|
T Consensus 182 --------------------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g 223 (311)
T 2q0l_A 182 --------------------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATN 223 (311)
T ss_dssp --------------------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTC
T ss_pred --------------------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCC
Confidence 0012223 3468999887 7777654 46776 67
Q ss_pred c--EEeCcEEEEccCCCCCccccccCCC----CccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHH
Q 016088 316 H--SHHFDSIVFCTGFKRSTNVWLKGDD----SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIA 385 (395)
Q Consensus 316 ~--~~~~D~vi~atG~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a 385 (395)
+ ++++|.||+|+|++|+.+ ++...+ ...+++|++.+| +.++++.|+|||+|||+.. ...|..||+.+|
T Consensus 224 ~~~~i~~D~vi~a~G~~p~~~-~l~~~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 301 (311)
T 2q0l_A 224 EKRELVVPGFFIFVGYDVNNA-VLKQEDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAA 301 (311)
T ss_dssp CEEEEECSEEEECSCEEECCG-GGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHH
T ss_pred ceEEEecCEEEEEecCccChh-hhhcccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHH
Confidence 6 689999999999999984 544432 234678999999 5678899999999999875 238999999999
Q ss_pred HHhhccc
Q 016088 386 DHINSIL 392 (395)
Q Consensus 386 ~~i~~~l 392 (395)
.+|.+.|
T Consensus 302 ~~i~~~l 308 (311)
T 2q0l_A 302 LSVISYL 308 (311)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998876
No 13
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=3.5e-37 Score=282.94 Aligned_cols=291 Identities=15% Similarity=0.218 Sum_probs=222.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecC----CCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERE----NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~----~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (395)
.+||+|||||++|+++|..|+++|++|+|||+. ...||.|.... ....++ .++.+....+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCCHHH
Confidence 589999999999999999999999999999994 47788776431 000111 1123456789
Q ss_pred HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016088 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (395)
Q Consensus 83 ~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~ 162 (395)
+.+++.+.++++++.+ ++++ |++++.+. +.|.+.+..... . ..+.+|+||+|+| +.|..|.++|.+.+
T Consensus 86 ~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~--~---~~~~~d~vvlAtG--~~~~~~~~~g~~~~ 153 (338)
T 3itj_A 86 LMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNED--A---EPVTTDAIILATG--ASAKRMHLPGEETY 153 (338)
T ss_dssp HHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSS--S---CCEEEEEEEECCC--EEECCCCCTTHHHH
T ss_pred HHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCC--C---cEEEeCEEEECcC--CCcCCCCCCCchhc
Confidence 9999999999998876 7777 99998765 677777742210 1 6789999999999 67888889988765
Q ss_pred ccCCCCCcceeecccCCCCC--CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCCh
Q 016088 163 CSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPC 240 (395)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (395)
.+..++.....+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++.+++. +++
T Consensus 154 ------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~-~~~---------------- 210 (338)
T 3itj_A 154 ------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH-LRA---------------- 210 (338)
T ss_dssp ------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCS----------------
T ss_pred ------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc-cCC----------------
Confidence 44445544433332 45689999999999999999999999999999999873 221
Q ss_pred hhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhc-CCcEEEecC--ceEEeCCe-----EEe
Q 016088 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRGNE-----VIF 312 (395)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~--v~~~~~~~-----v~~ 312 (395)
...+.+.+. ..+|+++.+ +.+++.++ |.+
T Consensus 211 -------------------------------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~ 247 (338)
T 3itj_A 211 -------------------------------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRI 247 (338)
T ss_dssp -------------------------------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEE
T ss_pred -------------------------------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEE
Confidence 011223343 348999987 88887653 777
Q ss_pred cC-----CcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHH
Q 016088 313 EN-----GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQN 383 (395)
Q Consensus 313 ~~-----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~ 383 (395)
++ ++++++|.||+|+|+.|+.. ++.. ....+++|++.+++..++++.|+|||+|||+.. ...|..+|..
T Consensus 248 ~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~~-~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~ 325 (338)
T 3itj_A 248 KNTKKNEETDLPVSGLFYAIGHTPATK-IVAG-QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCM 325 (338)
T ss_dssp EETTTTEEEEEECSEEEECSCEEECCG-GGBT-TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHH
T ss_pred EECCCCceEEEEeCEEEEEeCCCCChh-HhhC-ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHH
Confidence 76 46789999999999999984 4444 345678999997657888999999999999864 3388999999
Q ss_pred HHHHhhcccC
Q 016088 384 IADHINSILS 393 (395)
Q Consensus 384 ~a~~i~~~l~ 393 (395)
+|.+|.+.|.
T Consensus 326 aa~~i~~~l~ 335 (338)
T 3itj_A 326 AALDAEKYLT 335 (338)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999998875
No 14
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=9e-37 Score=279.91 Aligned_cols=296 Identities=20% Similarity=0.308 Sum_probs=221.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+.+||.|... ++... ++..+.++ .....++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGFP-------KVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCCC-------CCCHHHHHHH
Confidence 5899999999999999999999999999999999999988643 22111 11111111 1346788889
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCCccccccC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRGLSSFCSS 165 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~-~p~~~~~~g~~~~~~~ 165 (395)
+.+.++++++.+ +++++|++++.++ +.|.|.+.++ ..++||+||+|||..+ .|..|+++|.+.+
T Consensus 71 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~--- 135 (335)
T 2zbw_A 71 LVEQVAPFNPVY--SLGERAETLEREG--DLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREF--- 135 (335)
T ss_dssp HHHHHGGGCCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEECC--CEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhc---
Confidence 988888888765 8899999999875 4788877653 5789999999999533 5777888887765
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (395)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|++.|.+|+++.|++. +.+... .
T Consensus 136 ---~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~-~~~~~~--~--------------- 193 (335)
T 2zbw_A 136 ---EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ-FRAHEA--S--------------- 193 (335)
T ss_dssp ---BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CCSCHH--H---------------
T ss_pred ---cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc-cCccHH--H---------------
Confidence 33323322 2233345689999999999999999999999999999999873 222110 0
Q ss_pred HHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC----eEEec---CC-
Q 016088 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFE---NG- 315 (395)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~----~v~~~---~g- 315 (395)
...+.+.+++.+|+++.+ +.+++.+ .+.++ +|
T Consensus 194 --------------------------------------~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~ 235 (335)
T 2zbw_A 194 --------------------------------------VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQE 235 (335)
T ss_dssp --------------------------------------HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCC
T ss_pred --------------------------------------HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCc
Confidence 011234466678999888 7777765 57776 77
Q ss_pred -cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc------ccCccHHHHHHHHHh
Q 016088 316 -HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADHI 388 (395)
Q Consensus 316 -~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~~i 388 (395)
+++++|.||+|+|++|+.+ ++... ++...+|++.+| +.++++.|+|||+|||+.. ...|..+|..+|++|
T Consensus 236 ~~~i~~D~vi~a~G~~p~~~-~l~~~-~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i 312 (335)
T 2zbw_A 236 ELALEVDAVLILAGYITKLG-PLANW-GLALEKNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHA 312 (335)
T ss_dssp EEEEECSEEEECCCEEEECG-GGGGS-CCCEETTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHH
T ss_pred eEEEecCEEEEeecCCCCch-Hhhhc-ceeccCCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHH
Confidence 5789999999999999974 55544 233237889998 4777999999999999753 236888999999999
Q ss_pred hcccCC
Q 016088 389 NSILSP 394 (395)
Q Consensus 389 ~~~l~~ 394 (395)
.+.|.+
T Consensus 313 ~~~l~~ 318 (335)
T 2zbw_A 313 AAYANP 318 (335)
T ss_dssp HHHHCT
T ss_pred HHHhhh
Confidence 988754
No 15
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-36 Score=276.60 Aligned_cols=289 Identities=18% Similarity=0.263 Sum_probs=198.2
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCH
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (395)
|++ .+|||+||||||||++||..|+++|++|+|||+. .+||++.... ....++.+ .....
T Consensus 2 Mte--~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~----------~i~~~p~~-------~~~~~ 61 (312)
T 4gcm_A 2 MTE--IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTE----------EVENFPGF-------EMITG 61 (312)
T ss_dssp --C--CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSBCH
T ss_pred CCC--CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccc----------ccCCcCCc-------cccch
Confidence 553 3699999999999999999999999999999985 4666543210 00111111 12455
Q ss_pred HHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcc
Q 016088 81 AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLS 160 (395)
Q Consensus 81 ~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~ 160 (395)
.++.........+..... .....+...... ... +...++ .+++||+||+||| ++|+.|++||.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~-~~~~~~--------~~~~~d~liiAtG--s~~~~~~ipG~~ 125 (312)
T 4gcm_A 62 PDLSTKMFEHAKKFGAVY--QYGDIKSVEDKG---EYK-VINFGN--------KELTAKAVIIATG--AEYKKIGVPGEQ 125 (312)
T ss_dssp HHHHHHHHHHHHHTTCEE--EECCCCEEEECS---SCE-EEECSS--------CEEEEEEEEECCC--EEECCCCCTTTT
T ss_pred HHHHHHHHHHHhhccccc--cceeeeeeeeee---cce-eeccCC--------eEEEeceeEEccc--CccCcCCCCChh
Confidence 677777766666665544 444444433322 222 333332 7899999999999 889999999988
Q ss_pred ccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCCh
Q 016088 161 SFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPC 240 (395)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (395)
.+ .+..+++....+...+++|+++|||+|.+|+|+|..|++.|.+||++.|++ .++|......
T Consensus 126 ~~------~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~~---------- 188 (312)
T 4gcm_A 126 EL------GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRILQD---------- 188 (312)
T ss_dssp TT------BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHHHH----------
T ss_pred hh------CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhHHH----------
Confidence 77 555555555555555668999999999999999999999999999999988 4444332210
Q ss_pred hhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEe--CC-----e-E
Q 016088 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GN-----E-V 310 (395)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~--~~-----~-v 310 (395)
..++..++..... +.... .. . .
T Consensus 189 ------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (312)
T 4gcm_A 189 ------------------------------------------------RAFKNDKIDFIWSHTLKSINEKDGKVGSVTLT 220 (312)
T ss_dssp ------------------------------------------------HHHHCTTEEEECSEEEEEEEEETTEEEEEEEE
T ss_pred ------------------------------------------------HHHHhcCcceeeecceeeeeccccccccceee
Confidence 1112222222222 10000 00 0 1
Q ss_pred E--ecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHH
Q 016088 311 I--FENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNI 384 (395)
Q Consensus 311 ~--~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~ 384 (395)
. ..++..+++|.|++++|..|+. .+.... .+.+++|++.+| +.++||.|||||+|||++. +..|..||+.+
T Consensus 221 ~~~~~~~~~~~~d~v~~~~g~~~~~-~~~~~~-g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~A 297 (312)
T 4gcm_A 221 STKDGSEETHEADGVFIYIGMKPLT-APFKDL-GITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIA 297 (312)
T ss_dssp ETTTCCEEEEECSEEEECSCEEESC-GGGGGG-TCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHH
T ss_pred eecCCceeEEeeeeEEeecCCCcCc-hhHHhc-ceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHH
Confidence 1 1234578999999999999998 455544 566788999999 6888999999999999863 23789999999
Q ss_pred HHHhhcccC
Q 016088 385 ADHINSILS 393 (395)
Q Consensus 385 a~~i~~~l~ 393 (395)
|.+|.++|.
T Consensus 298 A~~i~~~L~ 306 (312)
T 4gcm_A 298 AQSAAEYIE 306 (312)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988763
No 16
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=4.2e-36 Score=272.99 Aligned_cols=290 Identities=20% Similarity=0.293 Sum_probs=219.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEE-EecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~v-ie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
..+||+|||||++|+++|..|+++|++|+| +|+ +.+||.|..... ...++ .++...+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 368999999999999999999999999999 999 677888764310 00111 112245778999
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
.++.+.++++++++ +++ +|+++ .+...+.|.+..... ..+.||+||+||| +.|..|.++|.+.+
T Consensus 66 ~~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~--------~~~~~d~lvlAtG--~~~~~~~~~g~~~~-- 129 (315)
T 3r9u_A 66 APWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG--------KTELAKAVIVCTG--SAPKKAGFKGEDEF-- 129 (315)
T ss_dssp HHHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCBTTTTT--
T ss_pred HHHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC--------CEEEeCEEEEeeC--CCCCCCCCCChhhc--
Confidence 99999999998775 666 88888 554335677534332 4788999999999 68888889988876
Q ss_pred CCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
.+..++...+.......+++++|||+|.+|+|+|..|.+.+.+|+++.+++.. .+..
T Consensus 130 ----~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~-~~~~------------------ 186 (315)
T 3r9u_A 130 ----FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF-RAAP------------------ 186 (315)
T ss_dssp ----BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC-BSCH------------------
T ss_pred ----CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC-CCCH------------------
Confidence 55566665554444556899999999999999999999999999999988732 1100
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe-----EEec--CC
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFE--NG 315 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~-----v~~~--~g 315 (395)
....+.+++.+|+++.+ +.+++.+. +.+. +|
T Consensus 187 ----------------------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g 226 (315)
T 3r9u_A 187 ----------------------------------------STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDG 226 (315)
T ss_dssp ----------------------------------------HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTS
T ss_pred ----------------------------------------HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCC
Confidence 00123345678999877 77776553 7776 78
Q ss_pred c--EEeCcEEEEccCCCCCccccccC---CC-CccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHH
Q 016088 316 H--SHHFDSIVFCTGFKRSTNVWLKG---DD-SMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIA 385 (395)
Q Consensus 316 ~--~~~~D~vi~atG~~~~~~~~~~~---~~-~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a 385 (395)
+ ++++|.||+|+|+.|+.. ++.. .+ ...+++|++.+| +.++++.|||||+|||+.. ...|..+|+.+|
T Consensus 227 ~~~~~~~D~vv~a~G~~p~~~-~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa 304 (315)
T 3r9u_A 227 SIRDLNVPGIFTFVGLNVRNE-ILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAA 304 (315)
T ss_dssp CEEEECCSCEEECSCEEECCG-GGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHH
T ss_pred CeEEeecCeEEEEEcCCCCch-hhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHH
Confidence 6 789999999999999984 4433 21 345778999999 5778899999999999742 348999999999
Q ss_pred HHhhcccC
Q 016088 386 DHINSILS 393 (395)
Q Consensus 386 ~~i~~~l~ 393 (395)
.+|.+.|.
T Consensus 305 ~~i~~~l~ 312 (315)
T 3r9u_A 305 LSAMAYIE 312 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998763
No 17
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=1.4e-36 Score=276.09 Aligned_cols=291 Identities=16% Similarity=0.243 Sum_probs=199.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.|||+||||||||++||..|+++|++|+|||+.. .||.+...+.+ .......++. ++...+..++.+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~G~~~-----~~~~i~~~~g------~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAGGQLT-----TTTIIENFPG------FPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTTCGGG-----GSSEECCSTT------CTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccCCCcC-----ChHHhhhccC------CcccCCHHHHHHH
Confidence 5899999999999999999999999999999875 33322211110 0111111111 1233566788888
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.+++++.. .....+....... ..+.+.+.++ ..++||+||+||| +.|+.|++||.+.+
T Consensus 72 ~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~~~~~--------~~~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTT---IITETIDHVDFST--QPFKLFTEEG--------KEVLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCE---EECCCEEEEECSS--SSEEEEETTC--------CEEEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcE---EEEeEEEEeecCC--CceEEEECCC--------eEEEEeEEEEccc--ccccccCCCccccc----
Confidence 98888888866 4445566555544 4555555543 7899999999999 78999999998765
Q ss_pred CCCcceeecccCCCC--CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 167 TGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~--~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
.+...+...+... ...++++++|||+|.+|+|+|..|++.|.+||++.|.+....+....
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~---------------- 194 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQ---------------- 194 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSCHHHH----------------
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccccccchhh----------------
Confidence 4444444433332 22458999999999999999999999999999999877322111110
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-----eEEe-----
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIF----- 312 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-----~v~~----- 312 (395)
.+.....++..+.. +.++... ++.+
T Consensus 195 -------------------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 231 (314)
T 4a5l_A 195 -------------------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVS 231 (314)
T ss_dssp -------------------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTT
T ss_pred -------------------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeeccc
Confidence 01111222222222 2222211 2222
Q ss_pred cCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc----CccHHHHHHHHHh
Q 016088 313 ENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY----GAAADAQNIADHI 388 (395)
Q Consensus 313 ~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~a~~~a~~i 388 (395)
.+++++++|.|++|+|++||.. ++... ...+++|++ ++ +.++|+.|||||+|||++.+. .|..+|..+|.+|
T Consensus 232 ~~~~~i~~d~vi~a~G~~pn~~-~l~~~-~~~~~~G~i-v~-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~ 307 (314)
T 4a5l_A 232 GEYKVVPVAGLFYAIGHSPNSK-FLGGQ-VKTADDGYI-LT-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSC 307 (314)
T ss_dssp CCEEEEECSEEEECSCEEESCG-GGTTS-SCBCTTSCB-CC-BTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred ccceeeccccceEecccccChh-Hhccc-ceEcCCeeE-eC-CCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHH
Confidence 3457889999999999999994 44433 456778887 44 378899999999999987653 6888999999999
Q ss_pred hcccC
Q 016088 389 NSILS 393 (395)
Q Consensus 389 ~~~l~ 393 (395)
.++|+
T Consensus 308 ~~yL~ 312 (314)
T 4a5l_A 308 EKWLQ 312 (314)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98874
No 18
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=3.1e-36 Score=273.35 Aligned_cols=286 Identities=19% Similarity=0.265 Sum_probs=214.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
++||+|||||++|+++|..|+++|++|+|||+ ..||.|.... .++.+. ...+.+..++.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~-------------~~~~~~----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV-------------DIENYI----SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC-------------EECCBT----TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc-------------cccccc----CcCCCCHHHHHHH
Confidence 37999999999999999999999999999985 4678776421 000000 0113456788999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCC-CCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+.+.++++++++ +.+++|+.++.+.+ .+.|.|.+.++ ..++||+||+||| +.|..|+++|.+.+
T Consensus 62 ~~~~~~~~~v~~--~~~~~v~~i~~~~~~~~~~~v~~~~g--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~--- 126 (310)
T 1fl2_A 62 LKVHVDEYDVDV--IDSQSASKLIPAAVEGGLHQIETASG--------AVLKARSIIVATG--AKWRNMNVPGEDQY--- 126 (310)
T ss_dssp HHHHHHTSCEEE--ECSCCEEEEECCSSTTCCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCeE--EccCEEEEEEecccCCceEEEEECCC--------CEEEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999998888766 88889999986532 24688887654 6789999999999 67788888888765
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (395)
.+..++...........+++++|||+|.+|+|+|..|++.+.+|+++.|++....
T Consensus 127 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~---------------------- 181 (310)
T 1fl2_A 127 ---RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA---------------------- 181 (310)
T ss_dssp ---BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS----------------------
T ss_pred ---ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc----------------------
Confidence 3443444333222334589999999999999999999999999999998873210
Q ss_pred HHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcC-CcEEEecC--ceEEeCC-----eEEecC---
Q 016088 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN--- 314 (395)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--v~~~~~~-----~v~~~~--- 314 (395)
...+.+.+.+ .+|+++.+ +++++.+ ++.+.+
T Consensus 182 --------------------------------------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~ 223 (310)
T 1fl2_A 182 --------------------------------------DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVS 223 (310)
T ss_dssp --------------------------------------CHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTT
T ss_pred --------------------------------------cHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCC
Confidence 0011233444 68999887 7777654 467764
Q ss_pred Cc--EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc----cCccHHHHHHHHHh
Q 016088 315 GH--SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHI 388 (395)
Q Consensus 315 g~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~~i 388 (395)
|+ ++++|.||+|+|++||.+ ++... ...+++|++.+| +.++++.|+|||+|||+..+ ..|..+|+.+|.+|
T Consensus 224 g~~~~i~~D~vi~a~G~~p~~~-~l~~~-l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 300 (310)
T 1fl2_A 224 GDIHNIELAGIFVQIGLLPNTN-WLEGA-VERNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 300 (310)
T ss_dssp CCEEEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCEEEEeeCCccCch-HHhcc-ccccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHH
Confidence 53 679999999999999984 54443 345778999999 45679999999999998754 37899999999999
Q ss_pred hccc
Q 016088 389 NSIL 392 (395)
Q Consensus 389 ~~~l 392 (395)
.+.|
T Consensus 301 ~~~l 304 (310)
T 1fl2_A 301 FDYL 304 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8876
No 19
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.2e-36 Score=272.93 Aligned_cols=286 Identities=18% Similarity=0.316 Sum_probs=211.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|+++|++|+|||+. ..||.|..... ...++. + ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~-~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLG------F-KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTT------B-SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCC------C-cccCHHHHHHH
Confidence 479999999999999999999999999999994 57776653210 000111 0 12456788888
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.++++++.+ +. .+|++++... +.|.|.+ ++ ..++||+||+|+| +.|..|+++|.+.+
T Consensus 78 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~-~~--------~~~~~~~li~AtG--~~~~~~~i~g~~~~---- 137 (319)
T 3cty_A 78 FADHAANYAKIR--EG-VEVRSIKKTQ--GGFDIET-ND--------DTYHAKYVIITTG--TTHKHLGVKGESEY---- 137 (319)
T ss_dssp HHHHHHTTSEEE--ET-CCEEEEEEET--TEEEEEE-SS--------SEEEEEEEEECCC--EEECCCCCBTTTTT----
T ss_pred HHHHHHHcCCEE--EE-eeEEEEEEeC--CEEEEEE-CC--------CEEEeCEEEECCC--CCcccCCCCChHHh----
Confidence 888888888764 55 7899998765 5677766 22 6789999999999 67888888887654
Q ss_pred CCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHH
Q 016088 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|++.. .+.
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~-~~~--------------------- 193 (319)
T 3cty_A 138 --FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY-MCE--------------------- 193 (319)
T ss_dssp --BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC-CSC---------------------
T ss_pred --CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc-CCC---------------------
Confidence 33333333222222345799999999999999999999999999999987731 110
Q ss_pred HHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-----eEEec---CCc
Q 016088 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE---NGH 316 (395)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-----~v~~~---~g~ 316 (395)
..+.+.+.+.+++++.+ +.++..+ ++.+. +|+
T Consensus 194 --------------------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~ 235 (319)
T 3cty_A 194 --------------------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGE 235 (319)
T ss_dssp --------------------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCC
T ss_pred --------------------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCc
Confidence 01123344567777776 6777644 36665 675
Q ss_pred --EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHHHHhhc
Q 016088 317 --SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINS 390 (395)
Q Consensus 317 --~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~~ 390 (395)
.+++|.||+|+|+.||. .++...+...+++|++.+| +.++++.|+|||+|||+.. ...|..+|+.+|.+|.+
T Consensus 236 ~~~i~~D~vi~a~G~~p~~-~~l~~~gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 313 (319)
T 3cty_A 236 EKLIETDGVFIYVGLIPQT-SFLKDSGVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYS 313 (319)
T ss_dssp EEEECCSEEEECCCEEECC-GGGTTSCCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEecCEEEEeeCCccCh-HHHhhccccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHH
Confidence 68999999999999998 4555543345778999999 4577999999999999875 23799999999999998
Q ss_pred ccCC
Q 016088 391 ILSP 394 (395)
Q Consensus 391 ~l~~ 394 (395)
.|.-
T Consensus 314 ~l~~ 317 (319)
T 3cty_A 314 DSIS 317 (319)
T ss_dssp HHTC
T ss_pred Hhhc
Confidence 8753
No 20
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=5.4e-36 Score=277.45 Aligned_cols=297 Identities=20% Similarity=0.277 Sum_probs=219.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++... .+..+..+ .....++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~~-------~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGFP-------EVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTCS-------SEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCCC-------CCCHHHHHHH
Confidence 5899999999999999999999999999999999999988632 21111 11111111 1356788899
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC-CCCCCCCCC-cccccc
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS-NPFTPDIRG-LSSFCS 164 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~-~p~~~~~~g-~~~~~~ 164 (395)
+.+.++++++.+ +++++|++++..+ .+.|.|.+.++ ..++||+||+|||..+ .|..++++| .+.+
T Consensus 80 l~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPDV--VLNETVTKYTKLD-DGTFETRTNTG--------NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCEE--EcCCEEEEEEECC-CceEEEEECCC--------cEEEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 998888888765 8899999999864 24788887654 6799999999999644 677777777 6555
Q ss_pred CCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
.+..++.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++. +.+...
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~~~----------------- 203 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHE-FQGHGK----------------- 203 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS-CSSCSH-----------------
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCC-CCCCHH-----------------
Confidence 33323322 2333445689999999999999999999999999999998872 211110
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-----eEEec--CC
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE--NG 315 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-----~v~~~--~g 315 (395)
....+.+..++.+|+++.+ +.+++.+ +|.+. +|
T Consensus 204 --------------------------------------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g 245 (360)
T 3ab1_A 204 --------------------------------------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDG 245 (360)
T ss_dssp --------------------------------------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTC
T ss_pred --------------------------------------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCC
Confidence 0011234455678999888 7777654 57775 77
Q ss_pred --cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc------ccCccHHHHHHHHH
Q 016088 316 --HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------LYGAAADAQNIADH 387 (395)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------~~~a~~~a~~~a~~ 387 (395)
+.+++|.||+|+|+.|+.+ +++..+...+ +|++.+| +.++++.|+|||+|||+.. ...|..||..+|++
T Consensus 246 ~~~~i~~D~vi~a~G~~p~~~-~l~~~~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~ 322 (360)
T 3ab1_A 246 SKWTVEADRLLILIGFKSNLG-PLARWDLELY-ENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRH 322 (360)
T ss_dssp CEEEEECSEEEECCCBCCSCG-GGGGSSCCEE-TTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHH
T ss_pred CeEEEeCCEEEECCCCCCCHH-HHHhhccccc-cCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHH
Confidence 5789999999999999984 5554422234 7899998 4777899999999999753 23788999999999
Q ss_pred hhcccCC
Q 016088 388 INSILSP 394 (395)
Q Consensus 388 i~~~l~~ 394 (395)
|.+.+.+
T Consensus 323 i~~~l~~ 329 (360)
T 3ab1_A 323 SLSYIKP 329 (360)
T ss_dssp HHHHHSC
T ss_pred HHhhcCC
Confidence 9988754
No 21
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.2e-36 Score=274.25 Aligned_cols=285 Identities=16% Similarity=0.224 Sum_probs=212.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|++.|++|+|||+. ..||.|..... ...++. ++......++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 76 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPG------FRNGITGPELMDE 76 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTT------CTTCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCC------CCCCCCHHHHHHH
Confidence 589999999999999999999999999999975 67777653210 001111 1122456788999
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEE-EEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNV-KASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+.+.++++++++ ++++ |++++. . +.|.| .+.++ ..++||+||+||| +.|..|+++|.+.+
T Consensus 77 l~~~~~~~~v~~--~~~~-v~~i~~-~--~~~~v~~~~~g--------~~~~~d~lviAtG--~~~~~~~i~g~~~~--- 137 (335)
T 2a87_A 77 MREQALRFGADL--RMED-VESVSL-H--GPLKSVVTADG--------QTHRARAVILAMG--AAARYLQVPGEQEL--- 137 (335)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEEC-S--SSSEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTHHHHT---
T ss_pred HHHHHHHcCCEE--EEee-EEEEEe-C--CcEEEEEeCCC--------CEEEeCEEEECCC--CCccCCCCCchHhc---
Confidence 998888888775 7766 888876 3 56777 66543 6899999999999 67888888887655
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDT 245 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 245 (395)
.+..++.....+.....+++++|||+|.+|+|+|..|++.+.+|+++.|++.. .+.
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~-~~~-------------------- 193 (335)
T 2a87_A 138 ---LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF-RAS-------------------- 193 (335)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC-SSC--------------------
T ss_pred ---cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC-Ccc--------------------
Confidence 33444433322222345899999999999999999999999999999988721 100
Q ss_pred HHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhh-hhhcCCcEEEecC--ceEEeCCe----EEec---CC
Q 016088 246 LMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE----VIFE---NG 315 (395)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--v~~~~~~~----v~~~---~g 315 (395)
..+. +.+++.+|+++.+ +.+++.++ +.++ +|
T Consensus 194 ---------------------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g 234 (335)
T 2a87_A 194 ---------------------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTG 234 (335)
T ss_dssp ---------------------------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTS
T ss_pred ---------------------------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCC
Confidence 0011 2345678999887 88887664 7776 45
Q ss_pred --cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHHHHhh
Q 016088 316 --HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHIN 389 (395)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~ 389 (395)
+++++|.||+|+|++|+.+ ++.. ....+++|++.+|+..++++.|+|||+|||++. ...|..+|..+|.+|.
T Consensus 235 ~~~~i~~D~vi~a~G~~p~~~-~~~~-~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 235 AETTLPVTGVFVAIGHEPRSG-LVRE-AIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp CCEEECCSCEEECSCEEECCT-TTBT-TBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEeecCEEEEccCCccChh-Hhhc-ccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 5789999999999999984 4442 233577899999965678999999999999875 2378899999999998
Q ss_pred ccc
Q 016088 390 SIL 392 (395)
Q Consensus 390 ~~l 392 (395)
+.|
T Consensus 313 ~~l 315 (335)
T 2a87_A 313 RWL 315 (335)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 22
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=5.8e-36 Score=270.57 Aligned_cols=285 Identities=15% Similarity=0.239 Sum_probs=205.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.+|||+||||||||++||..|++.|++|+|||+.. .||.+..+ | +.++. ....+..++.+
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~--------------~~~~~----~~~~~~~~~~~ 64 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-S--------------HGFIT----RDGIKPEEFKE 64 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-B--------------CCSTT----CTTBCHHHHHH
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-c--------------CCccC----CCCCCHHHHHH
Confidence 47999999999999999999999999999999875 44432211 1 11111 01234567777
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
...+.+.+++... +....+..+...+ .+.|.+.+.++ ..++||+||+||| ++|+.|+++|.+.+
T Consensus 65 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g--------~~~~a~~liiATG--s~p~~p~i~G~~~~--- 128 (304)
T 4fk1_A 65 IGLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH--------TKYLAERVLLATG--MQEEFPSIPNVREY--- 128 (304)
T ss_dssp HHHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC--------CEEEEEEEEECCC--CEEECCSCTTHHHH---
T ss_pred HHHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC--------CEEEeCEEEEccC--CccccccccCcccc---
Confidence 7666666665444 5666676666544 46778887765 7899999999999 78999999998876
Q ss_pred CCCCcceeecccCCCCCCCCCCeEEEEcCCCC-HHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~-a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
.+..++.....+....++++++|||+|.. ++++|..+.+.+.+|+++.+.+. ..+.
T Consensus 129 ---~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~-~~~~------------------- 185 (304)
T 4fk1_A 129 ---YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE-LSQT------------------- 185 (304)
T ss_dssp ---BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC-CCHH-------------------
T ss_pred ---ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEecccc-chhh-------------------
Confidence 55545554444445556788888888864 67888888888999999887662 1110
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC-----eEEecCCcEE
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN-----EVIFENGHSH 318 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~-----~v~~~~g~~~ 318 (395)
+.+.+++.++.++.. +..+..+ .+.+++|+++
T Consensus 186 ------------------------------------------~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i 223 (304)
T 4fk1_A 186 ------------------------------------------IMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRI 223 (304)
T ss_dssp ------------------------------------------HHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEE
T ss_pred ------------------------------------------hhhhhhccceeEeeeeEEEeecCCCeeeeeecccccee
Confidence 122334445555555 5555443 4888999999
Q ss_pred eCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHHHHhhcccC
Q 016088 319 HFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHINSILS 393 (395)
Q Consensus 319 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i~~~l~ 393 (395)
++|.+++++|..|+.. ++...+...+++|++.+| ++++|+.|||||+|||++. +..|..+|+.+|..|.++|.
T Consensus 224 ~~~~~vi~~g~~~~~~-~~~~~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 224 ERAGGFIVPTFFRPNQ-FIEQLGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CCCEEEECCEEECSSC-HHHHTTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eecceeeeeccccCCh-hhhhcCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9998888888777663 455554556889999999 6888999999999999864 33788999999999988873
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=8.5e-36 Score=273.18 Aligned_cols=286 Identities=16% Similarity=0.225 Sum_probs=211.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEec----CCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~----~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (395)
.+||+|||||++|+++|..|++.|++|+|||+ ....||.|.... ....++.+ +......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~~------~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPGF------PEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTTC------TTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCCC------ccCCCHHH
Confidence 57999999999999999999999999999998 455666554321 00111111 12235678
Q ss_pred HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccc-
Q 016088 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSS- 161 (395)
Q Consensus 83 ~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~- 161 (395)
+.+++.+.+++.++++ +.++ |++++... +.|.|.+ ++ ..++||+||+||| +.|..|+++|.+.
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~--------~~~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS--------KAILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS--------EEEEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC--------cEEEcCEEEECCC--CCcCCCCCCCcccc
Confidence 8899998888888775 7765 88888754 6788877 43 7899999999999 6678888887765
Q ss_pred ---cccCCCCCcceeecccCCCCCC--CCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhh
Q 016088 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLR 236 (395)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~ 236 (395)
+ .+..++.....+... ..+++++|||+|.+|+|+|..|.+.|.+|+++.|++. +.+.
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~-~~~~----------- 197 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA-FRAS----------- 197 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS-CCSC-----------
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc-CCcc-----------
Confidence 3 333344333222222 4589999999999999999999999999999998873 1110
Q ss_pred cCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhh-hhhcCCcEEEecC--ceEEeCCe----
Q 016088 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTC-EKIKSGQIQVLPG--IESIRGNE---- 309 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~--v~~~~~~~---- 309 (395)
..+. +.+++.+|+++.+ +.+++.++
T Consensus 198 ------------------------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~ 229 (333)
T 1vdc_A 198 ------------------------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDV 229 (333)
T ss_dssp ------------------------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSS
T ss_pred ------------------------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccc
Confidence 0011 2345678999887 77776543
Q ss_pred ---EEec---CC--cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCc
Q 016088 310 ---VIFE---NG--HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGA 377 (395)
Q Consensus 310 ---v~~~---~g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a 377 (395)
+.+. +| +++++|.||+|+|++|+.+ ++... ...+++|++.+|+..++|+.|+|||+|||+.. ...|
T Consensus 230 v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~-~~~~~-l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A 307 (333)
T 1vdc_A 230 LGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATK-FLDGG-VELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITA 307 (333)
T ss_dssp EEEEEEEETTTCCEEEEECSEEEECSCEEESCG-GGTTS-SCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHH
T ss_pred eeeEEEEecCCCceEEEecCEEEEEeCCccchH-Hhhcc-ccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHH
Confidence 7776 45 5789999999999999984 44422 33577899999965578999999999999875 2378
Q ss_pred cHHHHHHHHHhhccc
Q 016088 378 AADAQNIADHINSIL 392 (395)
Q Consensus 378 ~~~a~~~a~~i~~~l 392 (395)
..+|+.+|.+|.+.|
T Consensus 308 ~~~g~~aa~~i~~~l 322 (333)
T 1vdc_A 308 AGTGCMAALDAEHYL 322 (333)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHH
Confidence 999999999998876
No 24
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=1.2e-34 Score=269.32 Aligned_cols=309 Identities=19% Similarity=0.267 Sum_probs=214.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCCCCCcccccCCCCceeecccc---ccccCCCCCC--CCC------C
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAK---QFCQLPHLPF--PSS------Y 74 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~~~gg~~~~~~~~~l~~~~~~---~~~~~~~~~~--~~~------~ 74 (395)
++||+|||||++|+++|..|++.|. +|+|||+.+ +||.|...... .....+. ..+.+..... ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999998 99988643221 1111111 1111111100 000 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 75 PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
..+++..++.+++.++++++++.+ +++++|++++.++ +.|.|.+.+ ..+.||+||+|||.++.|.
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~~d~vVlAtG~~~~p~-- 146 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNI--FENTVVTNISADD--AYYTIATTT---------ETYHADYIFVATGDYNFPK-- 146 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CCEEEEEEEECCCSTTSBC--
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEECC--CeEEEEeCC---------CEEEeCEEEECCCCCCccC--
Confidence 235677889999999999988776 8999999999865 568887754 4578999999999655544
Q ss_pred CCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHH
Q 016088 155 DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (395)
Q Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (395)
+++ . ..+|+..+.....+++++++|||+|.+|+|+|..|.+.|.+|+++.|++.+..|..+...
T Consensus 147 -ip~-~----------~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~~d~~~---- 210 (369)
T 3d1c_A 147 -KPF-K----------YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSV---- 210 (369)
T ss_dssp -CCS-S----------SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----------CTT----
T ss_pred -CCC-C----------ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCCCCCCc----
Confidence 333 1 245666666555566889999999999999999999999999999998733212111000
Q ss_pred hhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCc-EEEecC--ceEE--eCC-
Q 016088 235 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQ-IQVLPG--IESI--RGN- 308 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~--v~~~--~~~- 308 (395)
.++ +.....+.+.+++.+ |+++.+ |.++ +.+
T Consensus 211 --~~~-----------------------------------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~ 247 (369)
T 3d1c_A 211 --RLS-----------------------------------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQ 247 (369)
T ss_dssp --SCC-----------------------------------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTE
T ss_pred --cCC-----------------------------------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCc
Confidence 001 011112244456665 999887 8888 444
Q ss_pred -eEEecCCcEEe-CcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------cCccH
Q 016088 309 -EVIFENGHSHH-FDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------YGAAA 379 (395)
Q Consensus 309 -~v~~~~g~~~~-~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------~~a~~ 379 (395)
.+.+.+|+.+. +|.||+|||++|+.+.+.... +.+++|++.+++..++++.|+|||+||++... ..+..
T Consensus 248 ~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~~~~--~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~ 325 (369)
T 3d1c_A 248 YHISFDSGQSVHTPHEPILATGFDATKNPIVQQL--FVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRA 325 (369)
T ss_dssp EEEEESSSCCEEESSCCEECCCBCGGGSHHHHHH--SCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGG
T ss_pred eEEEecCCeEeccCCceEEeeccCCccchhhhhh--ccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhH
Confidence 36788998775 699999999999984443222 22778999999667889999999999997642 14668
Q ss_pred HHHHHHHHhhcccC
Q 016088 380 DAQNIADHINSILS 393 (395)
Q Consensus 380 ~a~~~a~~i~~~l~ 393 (395)
||..+|++|.+.+.
T Consensus 326 ~a~~~a~~l~~~~~ 339 (369)
T 3d1c_A 326 RFAVLAHLLTQREG 339 (369)
T ss_dssp GHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcccC
Confidence 89999999988763
No 25
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=7.9e-35 Score=265.25 Aligned_cols=289 Identities=17% Similarity=0.274 Sum_probs=212.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
.+||+|||||++|+++|..|++.|++|+|||+. ..||.|..... ...++. ++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHHHH
Confidence 479999999999999999999999999999964 57776643210 001111 1222456788899
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.++++++++ +.++ |++++... +.|.+ +.++ ..+.||+||+||| +.|..|+++|.+.+
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~--------~~~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN--------GEYTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS--------CEEEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC--------CEEEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 998888888775 6665 88888754 67777 4433 6789999999999 67888888877655
Q ss_pred CCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHH
Q 016088 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTL 246 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.+..++.....+.....+++++|||+|.+|+|+|..|.+.|.+|+++.|++.. .+..
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-~~~~-------------------- 184 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF-RAEK-------------------- 184 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-CCCH--------------------
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc-ccCH--------------------
Confidence 33334433332222345899999999999999999999999999999988732 1110
Q ss_pred HHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe-----EEecC----C
Q 016088 247 MVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE-----VIFEN----G 315 (395)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~-----v~~~~----g 315 (395)
.+...+.+.+++.+|+++.+ +.+++.++ |.+++ |
T Consensus 185 -----------------------------------~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g 229 (320)
T 1trb_A 185 -----------------------------------ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSD 229 (320)
T ss_dssp -----------------------------------HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCC
T ss_pred -----------------------------------HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCC
Confidence 00011234456678999987 88887554 77765 4
Q ss_pred --cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCC----cccCCCCeEEEecccccc----cCccHHHHHHH
Q 016088 316 --HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPN----HWKGKNGLYCVGLSRKGL----YGAAADAQNIA 385 (395)
Q Consensus 316 --~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a 385 (395)
+++++|.||+|+|++|+.+ ++... ...+ +|++.+|... ++++.|+|||+|||+... ..|..+|..+|
T Consensus 230 ~~~~i~~D~vv~a~G~~p~~~-~~~~~-l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa 306 (320)
T 1trb_A 230 NIESLDVAGLFVAIGHSPNTA-IFEGQ-LELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAA 306 (320)
T ss_dssp CCEEEECSEEEECSCEEESCG-GGTTT-SCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEEEeCCCCChH-Hhccc-cccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHH
Confidence 5789999999999999984 44422 2345 8999999542 478999999999998753 37899999999
Q ss_pred HHhhcccC
Q 016088 386 DHINSILS 393 (395)
Q Consensus 386 ~~i~~~l~ 393 (395)
.+|.+.|.
T Consensus 307 ~~i~~~l~ 314 (320)
T 1trb_A 307 LDAERYLD 314 (320)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 99998875
No 26
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=3.6e-34 Score=276.59 Aligned_cols=287 Identities=18% Similarity=0.262 Sum_probs=218.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+||+|||||++|+++|..|+++|++|+++|+ ..||.|.... .+..+. . ..+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~-------------~~~~~~---~-~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV-------------DIENYI---S-VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS-------------CBCCBT---T-BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc-------------cccccC---C-CCCCCHHHHHH
Confidence 368999999999999999999999999999986 4678776421 000000 0 01246778999
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCC-CCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
++.+.++++++++ +.+++|++++.+.+ .+.|.|.+.++ ..++||+||+||| +.|..|.++|.+.+
T Consensus 272 ~l~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~V~~~~g--------~~~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVDV--IDSQSASKLVPAATEGGLHQIETASG--------AVLKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEEE--ECSCCEEEEECCSSTTSCEEEEETTS--------CEEEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EcCCEEEEEEeccCCCceEEEEECCC--------CEEEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 9999999888776 88999999986432 34788888664 6899999999999 67888888888776
Q ss_pred CCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
.+..++.+...+.....+++++|||+|.+|+|+|..|++.+.+|+++.|.+.+ .+.
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l-~~~------------------- 393 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM-KAD------------------- 393 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSC-CSC-------------------
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCccc-CcC-------------------
Confidence 44445544444434456899999999999999999999999999999988732 110
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcC-CcEEEecC--ceEEeCC-----eEEecC--
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG--IESIRGN-----EVIFEN-- 314 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--v~~~~~~-----~v~~~~-- 314 (395)
..+.+.+.+ .+|+++.+ +++++.+ ++.+.+
T Consensus 394 ----------------------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~ 433 (521)
T 1hyu_A 394 ----------------------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRV 433 (521)
T ss_dssp ----------------------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETT
T ss_pred ----------------------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCC
Confidence 012333444 68999888 7888754 466654
Q ss_pred -Cc--EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc----cCccHHHHHHHHH
Q 016088 315 -GH--SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADH 387 (395)
Q Consensus 315 -g~--~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~~ 387 (395)
|+ .+++|.|++|+|+.||. .++... ...+++|++.+| +.++|+.|+|||+|||+..+ ..|..+|..+|.+
T Consensus 434 ~g~~~~i~~D~vi~a~G~~pn~-~~l~~~-l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~ 510 (521)
T 1hyu_A 434 SGDIHSVALAGIFVQIGLLPNT-HWLEGA-LERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLS 510 (521)
T ss_dssp TCCEEEEECSEEEECCCEEESC-GGGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCEEEECcCCCCCc-hHHhhh-hccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHH
Confidence 54 67999999999999998 455543 345778999999 57779999999999998754 3789999999999
Q ss_pred hhccc
Q 016088 388 INSIL 392 (395)
Q Consensus 388 i~~~l 392 (395)
|..+|
T Consensus 511 i~~~L 515 (521)
T 1hyu_A 511 AFDYL 515 (521)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98776
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=5e-35 Score=276.72 Aligned_cols=291 Identities=18% Similarity=0.234 Sum_probs=204.5
Q ss_pred eEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 9 EVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+|+|||||++|+++|..|++.|. +|+|||+++..+. .. +..+....... ...........
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~--~~l~~~~~~~~---~~~~~~~~~~~------ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF-------AN--CALPYVIGEVV---EDRRYALAYTP------ 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB-------CG--GGHHHHHTTSS---CCGGGTBCCCH------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC-------Cc--chhHHHHcCCc---cchhhhhhcCH------
Confidence 69999999999999999999874 7999999875432 10 00110000000 00000001111
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
..+.++.++++ +.+++|+.++... ....+..... ++. ..+.||+||+||| ++|+.|+++|...+
T Consensus 64 -~~~~~~~~i~~--~~~~~V~~id~~~--~~~~~~~~~~---~~~--~~~~yd~lVIATG--s~p~~p~i~g~~~~---- 127 (437)
T 4eqs_A 64 -EKFYDRKQITV--KTYHEVIAINDER--QTVSVLNRKT---NEQ--FEESYDKLILSPG--ASANSLGFESDITF---- 127 (437)
T ss_dssp -HHHHHHHCCEE--EETEEEEEEETTT--TEEEEEETTT---TEE--EEEECSEEEECCC--EEECCCCCCCTTEE----
T ss_pred -HHHHHhcCCEE--EeCCeEEEEEccC--cEEEEEeccC---Cce--EEEEcCEEEECCC--CccccccccCceEE----
Confidence 23345567766 8899999998654 4433333221 121 6789999999999 78999988876544
Q ss_pred CCCcceeecccCCC--CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHH
Q 016088 167 TGTGEVIHSTQYKN--GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVD 244 (395)
Q Consensus 167 ~~~~~~~~~~~~~~--~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~ 244 (395)
....+......+ .....+++++|||+|.+|+|+|..+++.|.+||++.+++ .++|..+.....
T Consensus 128 --~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~~~~~------------ 192 (437)
T 4eqs_A 128 --TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDADMNQ------------ 192 (437)
T ss_dssp --CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCGGGGH------------
T ss_pred --eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccchhHH------------
Confidence 111111110000 011237899999999999999999999999999999988 455544333222
Q ss_pred HHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEecCCcEEeCcE
Q 016088 245 TLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDS 322 (395)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~~g~~~~~D~ 322 (395)
.+.+.+++.+|+++.+ +++++.+.+.+++|+++++|.
T Consensus 193 -----------------------------------------~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~ 231 (437)
T 4eqs_A 193 -----------------------------------------PILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDM 231 (437)
T ss_dssp -----------------------------------------HHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSE
T ss_pred -----------------------------------------HHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeee
Confidence 2345567778888888 999999999999999999999
Q ss_pred EEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------------cCccHHHHHHHHHhh
Q 016088 323 IVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAADAQNIADHIN 389 (395)
Q Consensus 323 vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~a~~~a~~i~ 389 (395)
|++|+|++||. .+++..+...+++|++.+| ++++|+.|||||+|||+..+ ..|..||+.+|+||.
T Consensus 232 vl~a~G~~Pn~-~~~~~~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 232 IIEGVGTHPNS-KFIESSNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp EEECCCEEESC-GGGTTSSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred EEEEeceecCc-HHHHhhhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 99999999998 4666554556889999999 67889999999999997642 167899999999998
Q ss_pred cc
Q 016088 390 SI 391 (395)
Q Consensus 390 ~~ 391 (395)
+.
T Consensus 310 g~ 311 (437)
T 4eqs_A 310 GN 311 (437)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 28
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.9e-34 Score=271.78 Aligned_cols=285 Identities=13% Similarity=0.152 Sum_probs=201.3
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|..|+++ +.+|+|||+++.+|..... +..... ..+....++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-----~~~~~~---------------~~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-----LSAYFN---------------HTINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-----chhhhc---------------CCCCCHHHhhc
Confidence 5899999999999999999998 8899999999866511000 000000 00001111111
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.....+.++++.+ +++++|++++.+. +.+.+.... .. ..++||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~v~~~~-~~------~~~~~d~lviAtG--~~p~~p~i~g~~~~--- 126 (452)
T 3oc4_A 63 ITEEELRRQKIQL--LLNREVVAMDVEN--QLIAWTRKE-EQ------QWYSYDKLILATG--ASQFSTQIRGSQTE--- 126 (452)
T ss_dssp CCHHHHHHTTEEE--ECSCEEEEEETTT--TEEEEEETT-EE------EEEECSEEEECCC--CCBCCCCCBTTTCT---
T ss_pred CCHHHHHHCCCEE--EECCEEEEEECCC--CEEEEEecC-ce------EEEEcCEEEECCC--cccCCCCCCCCCCC---
Confidence 1233445567665 8899999998765 666565111 11 7899999999999 79999999887643
Q ss_pred CCCCcceeecccCCCCCC-----CCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHHHHHhhcCC
Q 016088 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVP 239 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-----~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~ 239 (395)
.+++...+.+... ..+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++|. .+..+..
T Consensus 127 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~~~~~------- 193 (452)
T 3oc4_A 127 -----KLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDKEMVA------- 193 (452)
T ss_dssp -----TEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCHHHHH-------
T ss_pred -----CEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCHHHHH-------
Confidence 3455444333222 247999999999999999999999999999999988 44443 2222221
Q ss_pred hhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEe--CCe--EEec
Q 016088 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR--GNE--VIFE 313 (395)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~--~~~--v~~~ 313 (395)
.+.+.+++.+++++.+ +++++ ++. +.++
T Consensus 194 ----------------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~ 227 (452)
T 3oc4_A 194 ----------------------------------------------EVQKSLEKQAVIFHFEETVLGIEETANGIVLETS 227 (452)
T ss_dssp ----------------------------------------------HHHHHHHTTTEEEEETCCEEEEEECSSCEEEEES
T ss_pred ----------------------------------------------HHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEEC
Confidence 1245567789999987 88887 233 5666
Q ss_pred CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------------cCccHH
Q 016088 314 NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAAD 380 (395)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~ 380 (395)
+| ++++|.||+|+|++||.+ ++... ...+++|++.+| +.++|+.|+|||+|||++.. ..|..|
T Consensus 228 ~g-~i~aD~Vv~A~G~~p~~~-~l~~~-~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~ 303 (452)
T 3oc4_A 228 EQ-EISCDSGIFALNLHPQLA-YLDKK-IQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRT 303 (452)
T ss_dssp SC-EEEESEEEECSCCBCCCS-SCCTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHH
T ss_pred CC-EEEeCEEEECcCCCCChH-HHHhh-hccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHH
Confidence 66 899999999999999985 44443 455788999999 67889999999999998642 278999
Q ss_pred HHHHHHHhhcc
Q 016088 381 AQNIADHINSI 391 (395)
Q Consensus 381 a~~~a~~i~~~ 391 (395)
|+.+|++|.+.
T Consensus 304 g~~aa~~i~g~ 314 (452)
T 3oc4_A 304 GLVVANNLEEK 314 (452)
T ss_dssp HHHHTTSSSSC
T ss_pred HHHHHHHhcCC
Confidence 99999999765
No 29
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=277.18 Aligned_cols=308 Identities=16% Similarity=0.190 Sum_probs=204.2
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecccc----ccccCCCCCCCCC--
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSS-- 73 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~----~~~~~~~~~~~~~-- 73 (395)
|+....++||+|||||++|+++|..|++.|.+|+|||+. .+||+|... +.+...+.... .......+.+...
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 443344689999999999999999999999999999997 688887631 11110000000 0000000110000
Q ss_pred --C-CCCCCHHHHH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeC
Q 016088 74 --Y-PMFVSRAQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (395)
Q Consensus 74 --~-~~~~~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (395)
. ........+. ..+...++..++++ +.+ .++.++ ...+.+.+.++.. ..+.||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~----~~~~~v~~~~g~~------~~~~~d 150 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDV--VFG-WARFNK----DGNVEVQKRDNTT------EVYSAN 150 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEE-EEEECT----TSCEEEEESSSCC------EEEEEE
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEee----CCEEEEEeCCCcE------EEEEeC
Confidence 0 0111222222 22333444556553 444 354442 2456666654321 489999
Q ss_pred EEEEeecCCCCCCCC-CCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEec
Q 016088 140 FLVVASGETSNPFTP-DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (395)
Q Consensus 140 ~vVlAtG~~~~p~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~ 218 (395)
+||+||| +.|..| +++|.+.. +++.++..... .+++++|||+|.+|+|+|..|++.|.+|+++.+.
T Consensus 151 ~lviAtG--s~p~~p~~i~g~~~~----------~~~~~~~~l~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 151 HILVATG--GKAIFPENIPGFELG----------TDSDGFFRLEE-QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp EEEECCC--EEECCCTTSTTGGGS----------BCHHHHHHCSS-CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEcCC--CCCCCCCCCCCcccc----------cchHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999 788888 88876421 22222222222 3789999999999999999999999999999998
Q ss_pred CCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEE
Q 016088 219 PVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQV 298 (395)
Q Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 298 (395)
+ .++|..+..+... +.+.+++.+|++
T Consensus 218 ~-~~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~Gv~i 243 (479)
T 2hqm_A 218 E-TVLRKFDECIQNT-----------------------------------------------------ITDHYVKEGINV 243 (479)
T ss_dssp S-SSCTTSCHHHHHH-----------------------------------------------------HHHHHHHHTCEE
T ss_pred C-ccccccCHHHHHH-----------------------------------------------------HHHHHHhCCeEE
Confidence 8 4445433322221 234456668888
Q ss_pred ecC--ceEEeCC------eEEecCC-cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEe
Q 016088 299 LPG--IESIRGN------EVIFENG-HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVG 368 (395)
Q Consensus 299 ~~~--v~~~~~~------~v~~~~g-~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~G 368 (395)
+.+ +++++.+ .+.+++| +++++|.||+|+|++||. .+ ++..+...+++|++.+| +.++|+.|+|||+|
T Consensus 244 ~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~G 321 (479)
T 2hqm_A 244 HKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL-GMGSENVGIKLNSHDQIIAD-EYQNTNVPNIYSLG 321 (479)
T ss_dssp ECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC-CSSGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECG
T ss_pred EeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc-ccChhhcCceECCCCCEeEC-CCCccCCCCEEEEE
Confidence 887 7777642 4777888 789999999999999998 55 45553445778999999 56789999999999
Q ss_pred ccccccc---CccHHHHHHHHHhhcc
Q 016088 369 LSRKGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 369 d~~~~~~---~a~~~a~~~a~~i~~~ 391 (395)
||++.+. .|..||+.+|++|.+.
T Consensus 322 D~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 322 DVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp GGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred ecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 9987543 7899999999999864
No 30
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=2.8e-34 Score=275.17 Aligned_cols=306 Identities=13% Similarity=0.103 Sum_probs=207.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccccc----cc--cCCCCCCCCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FC--QLPHLPFPSSYPMFV 78 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~----~~--~~~~~~~~~~~~~~~ 78 (395)
.++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+..... .. .+.....+.. ....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCcc
Confidence 35899999999999999999999999999999998999988632 111000000000 00 0000000000 0001
Q ss_pred CHHHHH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016088 79 SRAQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 79 ~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
+...+. ..+...+++.++++ +.++. ..+ +. +.+.|.+.++. . ..++||+||+|||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~-~~~--~~--~~~~v~~~~gg---~---~~~~~d~lViAtG- 149 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYG-KIT--GK--NQVTATKADGG---T---QVIDTKNILIATG- 149 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEE-EEE--ET--TEEEEECTTSC---E---EEEEEEEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEE-EEe--cC--CEEEEEecCCC---c---EEEEeCEEEECCC-
Confidence 122222 22345556667664 55543 333 22 56667665421 1 6799999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccc-hh
Q 016088 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS-RE 226 (395)
Q Consensus 148 ~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p-~~ 226 (395)
++|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++| ..
T Consensus 150 -s~p~~p~i~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 218 (474)
T 1zmd_A 150 -SEVTPFPGITIDED--------TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGI 218 (474)
T ss_dssp -EEECCCTTCCCCSS--------SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSC
T ss_pred -CCCCCCCCCCCCcC--------cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCccc
Confidence 78888888886542 3555555444433 37999999999999999999999999999999988 5555 32
Q ss_pred hHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceE
Q 016088 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (395)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~ 304 (395)
+..+... +.+.+++.+|+++.+ +++
T Consensus 219 ~~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~ 245 (474)
T 1zmd_A 219 DMEISKN-----------------------------------------------------FQRILQKQGFKFKLNTKVTG 245 (474)
T ss_dssp CHHHHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEE
T ss_pred CHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCceEEE
Confidence 2222211 234466678999887 777
Q ss_pred EeCCe---EEe-------cCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc
Q 016088 305 IRGNE---VIF-------ENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG 373 (395)
Q Consensus 305 ~~~~~---v~~-------~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~ 373 (395)
++.++ +.+ .+++++++|.||+|+|++||...+ ++..+...+++|++.+| +.++|+.|+|||+|||++.
T Consensus 246 i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~ 324 (474)
T 1zmd_A 246 ATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKNLGLEELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAG 324 (474)
T ss_dssp EEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTTSSHHHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSS
T ss_pred EEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCcCCchhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCC
Confidence 76432 443 356789999999999999998543 34433345778999999 5678999999999999876
Q ss_pred cc---CccHHHHHHHHHhhcc
Q 016088 374 LY---GAAADAQNIADHINSI 391 (395)
Q Consensus 374 ~~---~a~~~a~~~a~~i~~~ 391 (395)
+. .|..||+.+|++|.+.
T Consensus 325 ~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 325 PMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp CCCHHHHHHHHHHHHHHHTTC
T ss_pred CccHHHHHHHHHHHHHHhcCC
Confidence 43 7899999999999875
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=6.5e-34 Score=275.32 Aligned_cols=304 Identities=15% Similarity=0.156 Sum_probs=214.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccccc----cccCCCCC-CCCCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLP-FPSSYPMFVS 79 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~----~~~~~~~~-~~~~~~~~~~ 79 (395)
.++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+..... ......+. ++.....+++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 121 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVG 121 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhh
Confidence 46899999999999999999999999999999998889987632 111100000000 00001111 1112222344
Q ss_pred HHHHHHHHH-------HHH-----HhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016088 80 RAQFIEYLD-------HYV-----SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 80 ~~~~~~~l~-------~~~-----~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
..++.+++. ... ++.++++ +++.+++.++. . .|.+. + ..++||+||+|||
T Consensus 122 ~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~----~--~v~~~-g--------~~~~~d~lViATG- 183 (523)
T 1mo9_A 122 IKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN----H--TVEAA-G--------KVFKAKNLILAVG- 183 (523)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET----T--EEEET-T--------EEEEBSCEEECCC-
T ss_pred HHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC----C--EEEEC-C--------EEEEeCEEEECCC-
Confidence 667776664 333 5667664 54777777652 2 25554 2 7899999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCcceeecccCC-CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh
Q 016088 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (395)
Q Consensus 148 ~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (395)
+.|..|+++|.+.. .++++.++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..
T Consensus 184 -s~p~~p~i~G~~~~--------~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~ 253 (523)
T 1mo9_A 184 -AGPGTLDVPGVNAK--------GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIK 253 (523)
T ss_dssp -EECCCCCSTTTTSB--------TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCC
T ss_pred -CCCCCCCCCCcccC--------cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccc
Confidence 78999988887643 345555444 3333434999999999999999999999999999999988 454443
Q ss_pred hHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceE
Q 016088 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (395)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~ 304 (395)
+..+.. .+.+.+++.+++++.+ |++
T Consensus 254 ~~~~~~-----------------------------------------------------~l~~~l~~~GV~i~~~~~V~~ 280 (523)
T 1mo9_A 254 DNETRA-----------------------------------------------------YVLDRMKEQGMEIISGSNVTR 280 (523)
T ss_dssp SHHHHH-----------------------------------------------------HHHHHHHHTTCEEESSCEEEE
T ss_pred cHHHHH-----------------------------------------------------HHHHHHHhCCcEEEECCEEEE
Confidence 222221 1244566678899887 777
Q ss_pred EeC--Ce------EEecCCc-EEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc
Q 016088 305 IRG--NE------VIFENGH-SHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY 375 (395)
Q Consensus 305 ~~~--~~------v~~~~g~-~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~ 375 (395)
++. ++ |.+++|+ ++++|.||+|+|++||...++...+...+++|++.|| ++++|+.|+|||+|||++.+.
T Consensus 281 i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~ 359 (523)
T 1mo9_A 281 IEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPM 359 (523)
T ss_dssp EEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCHHHHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSSC
T ss_pred EEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCccCHHHcCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCcc
Confidence 764 33 5667887 8999999999999999842444443445678999999 577899999999999988643
Q ss_pred ---CccHHHHHHHHHhhcc
Q 016088 376 ---GAAADAQNIADHINSI 391 (395)
Q Consensus 376 ---~a~~~a~~~a~~i~~~ 391 (395)
.|..||+.+|++|.+.
T Consensus 360 ~~~~A~~~g~~aa~~i~g~ 378 (523)
T 1mo9_A 360 EMFKARKSGCYAARNVMGE 378 (523)
T ss_dssp SHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHcCC
Confidence 8999999999999863
No 32
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=6.8e-34 Score=272.45 Aligned_cols=307 Identities=12% Similarity=0.105 Sum_probs=208.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeec-cc---------cccccCCCCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLH-LA---------KQFCQLPHLPFPSSY 74 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~-~~---------~~~~~~~~~~~~~~~ 74 (395)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||+|... ..+...+. .. ...+.+........+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 46899999999999999999999999999999998899987532 11100000 00 000000000000000
Q ss_pred CCCC-CH----HHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 75 PMFV-SR----AQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 75 ~~~~-~~----~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
..+. .. ..+...+...+++.++++ +.++.+. + +. +.+.|.+.++.. ..++||+||+||| +
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~~~v~~~~G~~------~~i~~d~lIiAtG--s 149 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKF-V--SP--SEISVDTIEGEN------TVVKGKHIIIATG--S 149 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEE-E--ET--TEEEECCSSSCC------EEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--cC--CEEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 0000 01 122333455566667765 7766553 3 22 456666544322 6799999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
.|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.+++ .++|..+..
T Consensus 150 ~p~~p~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~~ 219 (470)
T 1dxl_A 150 DVKSLPGVTIDEK--------KIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDAE 219 (470)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCcc--------cEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccHH
Confidence 8888888776532 3455444444333 37999999999999999999999999999999988 455543332
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~ 307 (395)
+... +.+.+++.+|+++.+ +.+++.
T Consensus 220 ~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~ 246 (470)
T 1dxl_A 220 IRKQ-----------------------------------------------------FQRSLEKQGMKFKLKTKVVGVDT 246 (470)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHSSCCEECSEEEEEEEC
T ss_pred HHHH-----------------------------------------------------HHHHHHHcCCEEEeCCEEEEEEE
Confidence 2221 234466678888887 888876
Q ss_pred Ce----EEec---CC--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc--
Q 016088 308 NE----VIFE---NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY-- 375 (395)
Q Consensus 308 ~~----v~~~---~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 375 (395)
++ +.++ +| +++++|.||+|+|++||...+ +...+...+++|++.|| +.++|+.|+|||+|||++.+.
T Consensus 247 ~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~ 325 (470)
T 1dxl_A 247 SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLNLDKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLA 325 (470)
T ss_dssp SSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSCCTTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCH
T ss_pred cCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccH
Confidence 42 4444 55 678999999999999998543 44443345678999999 567799999999999987643
Q ss_pred -CccHHHHHHHHHhhcc
Q 016088 376 -GAAADAQNIADHINSI 391 (395)
Q Consensus 376 -~a~~~a~~~a~~i~~~ 391 (395)
.|..||+.+|++|.+.
T Consensus 326 ~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 326 HKAEEDGVACVEYLAGK 342 (470)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 7899999999999864
No 33
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=4.2e-34 Score=274.59 Aligned_cols=306 Identities=16% Similarity=0.153 Sum_probs=205.0
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCeEEEe--------cCCCCCccccc-CCCCceeeccccc----cccCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie--------~~~~~gg~~~~-~~~~~l~~~~~~~----~~~~~~~~~~~ 72 (395)
++||+|||||++|+++|..|++ .|++|+||| +...+||+|.. .+++...+..... ......+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5899999999999999999999 999999999 35678988763 2222111000000 00000111100
Q ss_pred CCC-CCCCHHHHHHHHH-----------HHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeec-C-CCCceeeEEEE
Q 016088 73 SYP-MFVSRAQFIEYLD-----------HYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNL-L-SPGRVIEEYYS 137 (395)
Q Consensus 73 ~~~-~~~~~~~~~~~l~-----------~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~-~-~~~~~~~~~~~ 137 (395)
..+ ......++.++.+ ..+++. ++++ +.+ .++.++ . . .|.+.+. . .+... ..++
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g-~~~~i~--~--~--~v~v~~~~~~~~~~~--~~~~ 155 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF--FLG-WGSLES--K--N--VVVVRETADPKSAVK--ERLQ 155 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE--EES-EEEEEE--T--T--EEEEESSSSTTSCEE--EEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--EEe-EEEEee--C--C--EEEEeecCCccCCCC--eEEE
Confidence 000 0122334443332 233444 6553 444 354443 1 2 3555411 1 00001 7899
Q ss_pred eCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhh---cCeeEE
Q 016088 138 GRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSL 214 (395)
Q Consensus 138 ~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~---g~~v~~ 214 (395)
||+||+||| ++|..|+++|.+. ++++.++..... .+++++|||+|.+|+|+|..|++. |.+|++
T Consensus 156 ~d~lViATG--s~p~~p~i~G~~~----------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 156 ADHILLATG--SWPQMPAIPGIEH----------CISSNEAFYLPE-PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp EEEEEECCC--EEECCCCCTTGGG----------CEEHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred cCEEEEeCC--CCcCCCCCCCccc----------cccHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 999999999 7899888888742 244444443333 378999999999999999999999 999999
Q ss_pred EEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCC
Q 016088 215 VIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSG 294 (395)
Q Consensus 215 ~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
+.+.+ .++|..+..+... +.+.+++.
T Consensus 223 v~~~~-~~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~ 248 (495)
T 2wpf_A 223 CYRNN-LILRGFDETIREE-----------------------------------------------------VTKQLTAN 248 (495)
T ss_dssp EESSS-SSCTTSCHHHHHH-----------------------------------------------------HHHHHHHT
T ss_pred EEcCC-ccccccCHHHHHH-----------------------------------------------------HHHHHHhC
Confidence 99988 5555443332222 23446667
Q ss_pred cEEEecC--ceEEeCC-----eEEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEE
Q 016088 295 QIQVLPG--IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYC 366 (395)
Q Consensus 295 ~i~~~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya 366 (395)
+|+++.+ +++++.+ .+.+++|+++++|.||+|+|++||.+.+ ++..+...+++|++.|| +.++|+.|+|||
T Consensus 249 GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA 327 (495)
T 2wpf_A 249 GIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVD-EFSRTNVPNIYA 327 (495)
T ss_dssp TCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTGGGTTCCBCTTSSBCCC-TTCBCSSTTEEE
T ss_pred CCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccchhhcCccCCCCCCEEEC-CCCccCCCCEEE
Confidence 8898887 7777643 4777899999999999999999998544 45543445778999999 567899999999
Q ss_pred Eeccccccc---CccHHHHHHHHHhhcc
Q 016088 367 VGLSRKGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 367 ~Gd~~~~~~---~a~~~a~~~a~~i~~~ 391 (395)
+|||++.+. .|..||+.+|++|.+.
T Consensus 328 ~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 328 IGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp CGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 999987643 7899999999999863
No 34
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-34 Score=278.36 Aligned_cols=307 Identities=18% Similarity=0.217 Sum_probs=201.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecccccccc-----CCCCCCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQFCQ-----LPHLPFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|+++|.+|+|||+.+.+||+|... +++...+..+...+. +..+....... ....
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP-KLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-EECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-ccCH
Confidence 5899999999999999999999999999999999999987632 222111100000000 00000000000 0111
Q ss_pred HHH-----------HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 81 AQF-----------IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 81 ~~~-----------~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
..+ ...+....+..+++. +... ...+ +.+.+.|.+.++.. ..++||+||+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g~~------~~~~~d~lViATG--s 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQGT-GKVL----GQGKVSVTNEKGEE------QVLEAKNVVIATG--S 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEC----SSSEEEEECTTSCE------EEEECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe----cCCEEEEEeCCCce------EEEEeCEEEEccC--C
Confidence 222 222334445556553 3333 2222 23556666544321 6899999999999 5
Q ss_pred CCCCCCCCCccc-cccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhH
Q 016088 150 NPFTPDIRGLSS-FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV 228 (395)
Q Consensus 150 ~p~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~ 228 (395)
.| +.++|.+. + .+..+++..........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~ 239 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG 239 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH
Confidence 54 34566652 2 222233333322333458999999999999999999999999999999988 44444333
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEe
Q 016088 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (395)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~ 306 (395)
.+... +.+.+++.+|+++.+ +.+++
T Consensus 240 ~~~~~-----------------------------------------------------l~~~l~~~gV~v~~~~~v~~i~ 266 (491)
T 3urh_A 240 EVAKQ-----------------------------------------------------LQRMLTKQGIDFKLGAKVTGAV 266 (491)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHhCCCEEEECCeEEEEE
Confidence 22221 244566678888887 77776
Q ss_pred CC--e--EEecC---C--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc-
Q 016088 307 GN--E--VIFEN---G--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY- 375 (395)
Q Consensus 307 ~~--~--v~~~~---g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~- 375 (395)
.+ . +.+.+ | +++++|.||+|+|++|+.+.+ +...+...+++|++.+| +.++|+.|+|||+|||++.+.
T Consensus 267 ~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~ 345 (491)
T 3urh_A 267 KSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDGLGLAKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPML 345 (491)
T ss_dssp EETTEEEEEEEETTSCCCEEEEESEEEECCCCEECCTTSCHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCC
T ss_pred EeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCccCchhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCccc
Confidence 43 2 55553 5 578999999999999998654 34443445788999999 667899999999999987644
Q ss_pred --CccHHHHHHHHHhhccc
Q 016088 376 --GAAADAQNIADHINSIL 392 (395)
Q Consensus 376 --~a~~~a~~~a~~i~~~l 392 (395)
.|..||+.+|++|.+..
T Consensus 346 ~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 346 AHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp HHHHHHHHHHHHHHHTTSC
T ss_pred hhHHHHHHHHHHHHHcCCC
Confidence 89999999999998753
No 35
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=7.4e-34 Score=271.47 Aligned_cols=294 Identities=13% Similarity=0.109 Sum_probs=199.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecccc----ccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+.... ....+... .......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 5899999999999999999999999999999999999988742 11110000000 00000000 1112222
Q ss_pred HHH------------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 82 QFI------------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 82 ~~~------------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.+. .++....++.++++ +.+ ++..++. ..+.|...++.. ..+.||+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~v~~id~----~~~~V~~~~g~~------~~~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTF--YKG-YVKIKDP----THVIVKTDEGKE------IEAETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEE--ESE-EEEEEET----TEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEE--EEe-EEEEecC----CeEEEEcCCCcE------EEEecCEEEECCC--C
Confidence 222 23333344445553 333 5666552 456676655411 3499999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeecccCC---CCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh
Q 016088 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (395)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (395)
.|..|+++|.+.+ ++..++. ......+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 211 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITL 211 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCC
Confidence 8999999887632 2222222 1112247999999999999999999999999999999988 455544
Q ss_pred -hHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ce
Q 016088 227 -MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IE 303 (395)
Q Consensus 227 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~ 303 (395)
+..+...+ .+.++ |+++.+ ++
T Consensus 212 ~d~~~~~~l-----------------------------------------------------~~~l~---v~i~~~~~v~ 235 (466)
T 3l8k_A 212 EDQDIVNTL-----------------------------------------------------LSILK---LNIKFNSPVT 235 (466)
T ss_dssp CCHHHHHHH-----------------------------------------------------HHHHC---CCEECSCCEE
T ss_pred CCHHHHHHH-----------------------------------------------------HhcCE---EEEEECCEEE
Confidence 33322222 12222 666665 66
Q ss_pred EEeCC---e--EEec--CCc--EEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc
Q 016088 304 SIRGN---E--VIFE--NGH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG 373 (395)
Q Consensus 304 ~~~~~---~--v~~~--~g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~ 373 (395)
+++.+ + +.++ +|+ ++++|.|++|+|++|+.. + +...+...+++| +.+| +.++++.|+|||+|||++.
T Consensus 236 ~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~-l~l~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~ 312 (466)
T 3l8k_A 236 EVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP-EGAREIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGL 312 (466)
T ss_dssp EEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC-TTTGGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCS
T ss_pred EEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc-cchhhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCC
Confidence 66552 2 5666 676 789999999999999996 5 455544557789 9998 6788999999999999886
Q ss_pred cc---CccHHHHHHHHHhhcc
Q 016088 374 LY---GAAADAQNIADHINSI 391 (395)
Q Consensus 374 ~~---~a~~~a~~~a~~i~~~ 391 (395)
+. .|..||+.+|++|.+.
T Consensus 313 ~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 313 APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CCSHHHHHHHHHHHHHHHHTT
T ss_pred CccHhHHHHHHHHHHHHHhCC
Confidence 43 8999999999999864
No 36
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=8.4e-34 Score=271.49 Aligned_cols=306 Identities=14% Similarity=0.151 Sum_probs=205.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecccc----cccc-CCCCCCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQ-LPHLPFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+.... .... +..+..+.........
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4899999999999999999999999999999998999987632 11100000000 0000 0000000000000111
Q ss_pred HH-----------HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 81 AQ-----------FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 81 ~~-----------~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.+ +...+...+++.++++ +.++.+ .++ . ..+.|.+.++.. ..++||+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i~--~--~~~~v~~~~G~~------~~~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FET--A--HSIRVNGLDGKQ------EMLETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EEE--T--TEEEEEETTSCE------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Eee--C--CEEEEEecCCce------EEEEcCEEEECCC--C
Confidence 22 2223345556667765 666544 333 2 456666544321 6799999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
.|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|..+..
T Consensus 147 ~p~~p~~~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~ 216 (468)
T 2qae_A 147 EPTELPFLPFDEK--------VVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDED 216 (468)
T ss_dssp EECCBTTBCCCSS--------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CcCCCCCCCCCcC--------ceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCHH
Confidence 8888888776532 2455444444333 47999999999999999999999999999999988 555543332
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhh-cCCcEEEecC--ceEEe
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKI-KSGQIQVLPG--IESIR 306 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--v~~~~ 306 (395)
+... +.+.+ ++.+|+++.+ +++++
T Consensus 217 ~~~~-----------------------------------------------------l~~~l~~~~gv~i~~~~~v~~i~ 243 (468)
T 2qae_A 217 VTNA-----------------------------------------------------LVGALAKNEKMKFMTSTKVVGGT 243 (468)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHHTCCEEECSCEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHhhcCCcEEEeCCEEEEEE
Confidence 2221 23446 6678999887 78876
Q ss_pred CCe----EEec--CC--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc-ccc-
Q 016088 307 GNE----VIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-GLY- 375 (395)
Q Consensus 307 ~~~----v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-~~~- 375 (395)
.++ +.++ +| +++++|.||+|+|++||.+.+ ++..+...+++|++.|| +.++|+.|+|||+|||++ .+.
T Consensus 244 ~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~ 322 (468)
T 2qae_A 244 NNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGLGLDKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPML 322 (468)
T ss_dssp ECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSC
T ss_pred EcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCCCchhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCcc
Confidence 542 4554 67 678999999999999998543 34333345678999999 567899999999999988 543
Q ss_pred --CccHHHHHHHHHhhcc
Q 016088 376 --GAAADAQNIADHINSI 391 (395)
Q Consensus 376 --~a~~~a~~~a~~i~~~ 391 (395)
.|..||+.+|++|.+.
T Consensus 323 ~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 323 AHKAEDEGVACAEILAGK 340 (468)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHHHcCC
Confidence 7899999999999864
No 37
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=5.9e-34 Score=273.72 Aligned_cols=288 Identities=19% Similarity=0.242 Sum_probs=200.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC---CCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~---~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
++||+|||||++|+++|..|++.| .+|+|||+++..+..+.. +........ ... .++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~~~------~~~---------~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGEQI------AGP---------EGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTTSS------SCS---------GGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcCcc------CCH---------HHh
Confidence 489999999999999999999988 999999998855422110 000000000 000 001
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcc---
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLS--- 160 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~--- 160 (395)
.....+.++++++++ +.+++|+.++.+. +.+.+.. ++.. ..++||+||+||| ++|..|+++|.+
T Consensus 95 ~~~~~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~-~g~~------~~~~~d~lviAtG--~~p~~p~i~G~~~~~ 161 (490)
T 2bc0_A 95 FYSDKEELESLGAKV--YMESPVQSIDYDA--KTVTALV-DGKN------HVETYDKLIFATG--SQPILPPIKGAEIKE 161 (490)
T ss_dssp BSCCHHHHHHTTCEE--ETTCCEEEEETTT--TEEEEEE-TTEE------EEEECSEEEECCC--EEECCCSCBTCCBCT
T ss_pred hhcCHHHHHhCCCEE--EeCCEEEEEECCC--CEEEEEe-CCcE------EEEECCEEEECCC--CCcCCCCCCCccccc
Confidence 111123344567665 7899999998654 5544431 2211 6799999999999 789888888876
Q ss_pred ---ccccCCCCC---cceeecccCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-h
Q 016088 161 ---SFCSSATGT---GEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-E 226 (395)
Q Consensus 161 ---~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~ 226 (395)
.| . ..+++...+.+ .....+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++|+ .
T Consensus 162 ~~~~f------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 234 (490)
T 2bc0_A 162 GSLEF------EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYY 234 (490)
T ss_dssp TCTTC------CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTS
T ss_pred ccccc------ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHH
Confidence 22 1 12343322211 111358999999999999999999999999999999988 44442 2
Q ss_pred hHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceE
Q 016088 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (395)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~ 304 (395)
+..+. +.+.+.+++.+|+++.+ +++
T Consensus 235 ~~~~~-----------------------------------------------------~~l~~~l~~~GV~i~~~~~v~~ 261 (490)
T 2bc0_A 235 DRDLT-----------------------------------------------------DLMAKNMEEHGIQLAFGETVKE 261 (490)
T ss_dssp CHHHH-----------------------------------------------------HHHHHHHHTTTCEEEETCCEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHHHhCCeEEEeCCEEEE
Confidence 22111 11245567788999887 888
Q ss_pred EeCCe----EEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------
Q 016088 305 IRGNE----VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG------- 373 (395)
Q Consensus 305 ~~~~~----v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~------- 373 (395)
++.++ +.+ +|+++++|.||+|+|++||.+ +++.. ...+++|++.|| +.++|+.|+|||+|||+..
T Consensus 262 i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~-ll~~~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~ 337 (490)
T 2bc0_A 262 VAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTT-LGNGK-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRD 337 (490)
T ss_dssp EECSSSCCEEEE-SSCEEECSEEEECCCEEECCG-GGTTC-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTE
T ss_pred EEcCCcEEEEEE-CCcEEECCEEEECCCCCcChH-HHHhh-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCc
Confidence 87653 444 778999999999999999985 55544 345678999999 5778899999999999763
Q ss_pred ------ccCccHHHHHHHHHhhcc
Q 016088 374 ------LYGAAADAQNIADHINSI 391 (395)
Q Consensus 374 ------~~~a~~~a~~~a~~i~~~ 391 (395)
...|..||+.+|++|.+.
T Consensus 338 ~~~~~~~~~A~~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 338 TNYIALASNAVRTGIVAAHNACGT 361 (490)
T ss_dssp EECCCCHHHHHHHHHHHHHHHTTC
T ss_pred eeecccHHHHHHHHHHHHHHhcCC
Confidence 227899999999999865
No 38
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.8e-34 Score=272.71 Aligned_cols=299 Identities=18% Similarity=0.244 Sum_probs=195.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecc----ccccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.+...+.. .........+.+... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 479999999999999999999999999999998 488887532 111100000 000000000011000 011222
Q ss_pred H-----------HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe---------ecCCCCceeeEEEEeCEE
Q 016088 82 Q-----------FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---------NLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 82 ~-----------~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~---------~~~~~~~~~~~~~~~d~v 141 (395)
+ +...+...+++.++++ +.++ ++.++. ..+.+... ++.+ ..++||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~id~----~~v~v~~~~~~~~~~~~~~~~------~~~~~d~l 145 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGT-ASFLSE----NRILIKGTKDNNNKDNGPLNE------EILEGRNI 145 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CCCC------------------------------------CBSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEeeC----CEEEEEeccccccccccCCCc------eEEEeCEE
Confidence 2 2223344455667664 5443 333321 23333220 0111 67899999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCc
Q 016088 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVH 221 (395)
Q Consensus 142 VlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~ 221 (395)
|+||| +.|..|+++|.+. ++++.++..... +++++|||+|.+|+|+|..|++.|.+|+++.+.+ .
T Consensus 146 ViAtG--s~p~~p~i~G~~~----------~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ 210 (500)
T 1onf_A 146 LIAVG--NKPVFPPVKGIEN----------TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-R 210 (500)
T ss_dssp EECCC--CCBCCCSCTTGGG----------CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-S
T ss_pred EECCC--CCCCCCCCCCCCc----------ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-c
Confidence 99999 7899888888742 344444444433 7899999999999999999999999999999988 5
Q ss_pred ccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC
Q 016088 222 VLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (395)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 301 (395)
++|..+..+... +.+.+++.+|+++.+
T Consensus 211 ~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 211 ILRKFDESVINV-----------------------------------------------------LENDMKKNNINIVTF 237 (500)
T ss_dssp SCTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEECS
T ss_pred cCcccchhhHHH-----------------------------------------------------HHHHHHhCCCEEEEC
Confidence 555443332222 234566778999888
Q ss_pred --ceEEeCC-----eEEecCCcE-EeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccc-
Q 016088 302 --IESIRGN-----EVIFENGHS-HHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSR- 371 (395)
Q Consensus 302 --v~~~~~~-----~v~~~~g~~-~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~- 371 (395)
+++++.+ .+.+++|++ +++|.||+|+|++||.+.+ +...+... ++|++.+| +.++|+.|+|||+|||+
T Consensus 238 ~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~-~~G~i~vd-~~~~t~~~~iya~GD~~~ 315 (500)
T 1onf_A 238 ADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDTENLKLEKLNVET-NNNYIVVD-ENQRTSVNNIYAVGDCCM 315 (500)
T ss_dssp CCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTTTTSSCTTTTCCB-SSSCEEEC-TTCBCSSSSEEECSTTEE
T ss_pred CEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCCCCCCchhcCccc-cCCEEEEC-CCcccCCCCEEEEecccc
Confidence 8888643 377789988 9999999999999998545 45443334 78999999 56779999999999998
Q ss_pred ---------------------------------cccc---CccHHHHHHHHHhhcc
Q 016088 372 ---------------------------------KGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 372 ---------------------------------~~~~---~a~~~a~~~a~~i~~~ 391 (395)
+.+. .|..||+.+|++|.+.
T Consensus 316 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 316 VKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp EC------------------------------CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhCC
Confidence 2222 7899999999999863
No 39
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.8e-33 Score=269.78 Aligned_cols=309 Identities=16% Similarity=0.147 Sum_probs=210.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCeEEEecCCCCCcccccC-CCCceeecccc----ccccCCCCCCCCCC-CCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSY-PMF 77 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~---~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~----~~~~~~~~~~~~~~-~~~ 77 (395)
++||+|||||++|+++|..|+++ |.+|+|||+++ +||+|... ..+...+.... ....+.....+... ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999999 99999999988 88877532 11110000000 00011111111000 001
Q ss_pred CCHHH-----------HHHHHHHHHHhcCCcceeeeeeeEEEeEEeC--CCCcEEEEEeecCCCCceeeEEEEeCEEEEe
Q 016088 78 VSRAQ-----------FIEYLDHYVSHFNIVPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGRVIEEYYSGRFLVVA 144 (395)
Q Consensus 78 ~~~~~-----------~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlA 144 (395)
.+... +...+.+.+++.++++ +.++ ++.++... +.+.+.|...++.. ..+.||+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~~~~~~~~~~~~V~~~~g~~------~~~~~d~lviA 151 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGR-GELIDSTPGLARHRIKATAADGST------SEHEADVVLVA 151 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEECCSSSCCSSEEEEEECTTSCE------EEEEESEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEecCcccCCCCEEEEEeCCCcE------EEEEeCEEEEc
Confidence 12222 2333456666777775 5554 65555310 01445565544311 37999999999
Q ss_pred ecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccc
Q 016088 145 SGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLS 224 (395)
Q Consensus 145 tG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p 224 (395)
|| +.|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|
T Consensus 152 TG--s~p~~p~i~g~~~~--------~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 219 (499)
T 1xdi_A 152 TG--ASPRILPSAQPDGE--------RILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLP 219 (499)
T ss_dssp CC--EEECCCGGGCCCSS--------SEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSC
T ss_pred CC--CCCCCCCCCCCCcC--------cEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-cccc
Confidence 99 78888888877643 3555555544433 37899999999999999999999999999999988 5555
Q ss_pred hhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--c
Q 016088 225 REMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--I 302 (395)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v 302 (395)
..+..+... +.+.+++.+++++.+ |
T Consensus 220 ~~d~~~~~~-----------------------------------------------------l~~~l~~~GV~i~~~~~V 246 (499)
T 1xdi_A 220 YEDADAALV-----------------------------------------------------LEESFAERGVRLFKNARA 246 (499)
T ss_dssp CSSHHHHHH-----------------------------------------------------HHHHHHHTTCEEETTCCE
T ss_pred ccCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEE
Confidence 433322222 234566678999887 8
Q ss_pred eEEeCCe----EEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc--
Q 016088 303 ESIRGNE----VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY-- 375 (395)
Q Consensus 303 ~~~~~~~----v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 375 (395)
++++.++ +.+.+|+++++|.||+|+|++||.+.+ ++..+...+++|++.|| +.++|+.|+|||+|||++.+.
T Consensus 247 ~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~ 325 (499)
T 1xdi_A 247 ASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLA 325 (499)
T ss_dssp EEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSCTTTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCH
T ss_pred EEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCCchhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccH
Confidence 8886543 555688899999999999999998543 44443445778999999 567899999999999988643
Q ss_pred -CccHHHHHHHHHhhcc
Q 016088 376 -GAAADAQNIADHINSI 391 (395)
Q Consensus 376 -~a~~~a~~~a~~i~~~ 391 (395)
.|..||+.+|++|.+.
T Consensus 326 ~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 326 SVAAMQGRIAMYHALGE 342 (499)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 7999999999999875
No 40
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=5.2e-34 Score=273.18 Aligned_cols=297 Identities=13% Similarity=0.154 Sum_probs=193.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|+++ +.+|+|||+++.++ |.....+. .... ........++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~g--------~~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVSG--------EVSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhcC--------CCCchHHhccccchhc
Confidence 46999999999999999999998 89999999998653 11100000 0000 0000000011112245
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
.+...+.+++++.+ +++++|++++... ..+.+..... ++. ..+.||+||+||| +.|..|+++|.+..
T Consensus 70 ~~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~~~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~-- 136 (472)
T 3iwa_A 70 RDPEFFRINKDVEA--LVETRAHAIDRAA--HTVEIENLRT---GER--RTLKYDKLVLALG--SKANRPPVEGMDLA-- 136 (472)
T ss_dssp -----------CEE--ECSEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCSCTTTTSB--
T ss_pred cCHHHHhhhcCcEE--EECCEEEEEECCC--CEEEEeecCC---CCE--EEEECCEEEEeCC--CCcCCCCCCCCCCC--
Confidence 56666666677765 8999999998754 5555543111 111 5899999999999 78999988887632
Q ss_pred CCCCCcceeecccCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhh-cCeeEEEEecCCcccc-hhhHHHHHHHh
Q 016088 165 SATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPVHVLS-REMVYLGLVLL 235 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~-------~~~~~~~~v~ViG~g~~a~e~a~~l~~~-g~~v~~~~r~~~~~~p-~~~~~~~~~~~ 235 (395)
.+++.....+ .....+++++|||+|.+|+|+|..+.+. |.+|+++.+.+ .++| ..+..+..
T Consensus 137 ------~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~~~~~--- 206 (472)
T 3iwa_A 137 ------GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSKSLSQ--- 206 (472)
T ss_dssp ------TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCHHHHH---
T ss_pred ------CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCHHHHH---
Confidence 2333222111 1112378999999999999999999999 99999999987 4444 22222111
Q ss_pred hcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC-Ce---
Q 016088 236 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG-NE--- 309 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~-~~--- 309 (395)
.+.+.+++.+++++.+ +++++. ++
T Consensus 207 --------------------------------------------------~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~ 236 (472)
T 3iwa_A 207 --------------------------------------------------MLRHDLEKNDVVVHTGEKVVRLEGENGKVA 236 (472)
T ss_dssp --------------------------------------------------HHHHHHHHTTCEEECSCCEEEEEESSSBEE
T ss_pred --------------------------------------------------HHHHHHHhcCCEEEeCCEEEEEEccCCeEE
Confidence 1244566778999887 888875 32
Q ss_pred EEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc-------c------ccC
Q 016088 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G------LYG 376 (395)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~------~~~ 376 (395)
+.+++|+++++|.||+|+|+.|+.+ +....+...+++|++.+| +.++++.|+|||+|||+. . ...
T Consensus 237 v~~~~g~~i~aD~Vv~a~G~~p~~~-l~~~~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~ 314 (472)
T 3iwa_A 237 RVITDKRTLDADLVILAAGVSPNTQ-LARDAGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSM 314 (472)
T ss_dssp EEEESSCEEECSEEEECSCEEECCH-HHHHHTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTH
T ss_pred EEEeCCCEEEcCEEEECCCCCcCHH-HHHhCCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHH
Confidence 7778999999999999999999984 555443445788999999 577899999999999973 2 126
Q ss_pred ccHHHHHHHHHhhcc
Q 016088 377 AAADAQNIADHINSI 391 (395)
Q Consensus 377 a~~~a~~~a~~i~~~ 391 (395)
|..||+.+|++|.+.
T Consensus 315 A~~~g~~aa~~i~g~ 329 (472)
T 3iwa_A 315 ANRQGRVIGTNLADG 329 (472)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999865
No 41
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.3e-33 Score=269.93 Aligned_cols=301 Identities=18% Similarity=0.195 Sum_probs=203.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccc----cccc-cCCCCCCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|+++|.+|+|||+. .+||+|... ..+...+... .... ........ . ......
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~-~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G-EVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E-CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C-CCccCH
Confidence 479999999999999999999999999999998 678876431 1111000000 0000 00000000 0 000111
Q ss_pred H-----------HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 81 A-----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 81 ~-----------~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
. .+...+.+.+++.++++ +.++.+. + + .+.+.|.+.++.. ..++||+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~-i--d--~~~v~V~~~~G~~------~~~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF-A--D--ANTLLVDLNDGGT------ESVTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE-S--S--SSEEEEEETTSCC------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--c--CCeEEEEeCCCce------EEEEcCEEEECCC--C
Confidence 1 23334455666667665 6666543 2 2 3566676654322 5799999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
.|..|+++|.+. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.+++ .++|..+..
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 213 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDAD 213 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCc---------eEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHH
Confidence 888888777543 1444444333333 37999999999999999999999999999999988 555544333
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~ 307 (395)
+... +.+.+++.+|+++.+ +++++.
T Consensus 214 ~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~ 240 (464)
T 2a8x_A 214 VSKE-----------------------------------------------------IEKQFKKLGVTILTATKVESIAD 240 (464)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHHTCEEECSCEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHHcCCEEEeCcEEEEEEE
Confidence 2222 234456668888887 777765
Q ss_pred Ce----EEec-CC--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---C
Q 016088 308 NE----VIFE-NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---G 376 (395)
Q Consensus 308 ~~----v~~~-~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 376 (395)
++ +.++ +| +++++|.|++|+|++||.+.+ ++..+...+++|++.|| +.++|+.|+|||+|||++.+. .
T Consensus 241 ~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~ 319 (464)
T 2a8x_A 241 GGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGYGLDKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHV 319 (464)
T ss_dssp CSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSSCHHHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHH
T ss_pred cCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCCCchhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHH
Confidence 42 4444 66 678999999999999998543 34432345678999999 567799999999999987643 7
Q ss_pred ccHHHHHHHHHhhc
Q 016088 377 AAADAQNIADHINS 390 (395)
Q Consensus 377 a~~~a~~~a~~i~~ 390 (395)
|..||+.+|++|.+
T Consensus 320 A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 320 AEAQGVVAAETIAG 333 (464)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcC
Confidence 89999999999987
No 42
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.2e-33 Score=268.69 Aligned_cols=297 Identities=18% Similarity=0.206 Sum_probs=198.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccccc----cc-cCCCCCCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FC-QLPHLPFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|... +.+...+..... .. ....+.+... ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 589999999999999999999999999999997 688887531 111100000000 00 0000000000 000122
Q ss_pred HHHHH-----------HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 81 AQFIE-----------YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 81 ~~~~~-----------~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.++.+ .+...+++.+++. +.+ .++.++ . . .|.+ ++ ..++||+||+||| +
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~--~--~--~v~~-~g--------~~~~~d~lviAtG--s 141 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDV--IKG-FARFVD--A--K--TLEV-NG--------ETITADHILIATG--G 141 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CCEEEE--T--T--EEEE-TT--------EEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEec--C--C--EEEE-CC--------EEEEeCEEEECCC--C
Confidence 22222 2233345556654 444 334443 1 2 2555 32 7899999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 150 NPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 150 ~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
+|..|+++|.+.. +++.++..... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+..
T Consensus 142 ~p~~p~i~g~~~~----------~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 209 (450)
T 1ges_A 142 RPSHPDIPGVEYG----------IDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDPM 209 (450)
T ss_dssp EECCCCSTTGGGS----------BCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCccce----------ecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhHH
Confidence 8998888887422 23223322222 37899999999999999999999999999999987 444433222
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~ 307 (395)
+... +.+.+++.+++++.+ +++++.
T Consensus 210 ~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i~~ 236 (450)
T 1ges_A 210 ISET-----------------------------------------------------LVEVMNAEGPQLHTNAIPKAVVK 236 (450)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHHSCEEECSCCEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEE
Confidence 2211 234455567888887 777764
Q ss_pred C-----eEEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Ccc
Q 016088 308 N-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAA 378 (395)
Q Consensus 308 ~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 378 (395)
+ .+.+++|+++++|.||+|+|++||.+.+ ++..+...+++|++.|| +.++|+.|+|||+|||++.+. .|.
T Consensus 237 ~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~ 315 (450)
T 1ges_A 237 NTDGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAV 315 (450)
T ss_dssp CTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHH
T ss_pred eCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCCchhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHH
Confidence 3 4777899899999999999999998544 34443345778999999 567799999999999987543 789
Q ss_pred HHHHHHHHHhhcc
Q 016088 379 ADAQNIADHINSI 391 (395)
Q Consensus 379 ~~a~~~a~~i~~~ 391 (395)
.||+.+|++|.+.
T Consensus 316 ~~g~~aa~~i~~~ 328 (450)
T 1ges_A 316 AAGRRLSERLFNN 328 (450)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999863
No 43
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=2.4e-34 Score=282.85 Aligned_cols=291 Identities=16% Similarity=0.263 Sum_probs=212.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|+++ +.+|+|||+++.++ |... ..+... ... .......+.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~--~lp~~~---~g~-------~~~~~~~~~ 96 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANC--GLPYYI---GGV-------ITERQKLLV 96 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGG--GHHHHH---TTS-------SCCGGGGBS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCC--CCchhh---cCc-------CCChHHhhc
Confidence 57999999999999999999998 88999999998654 1100 000000 000 001122344
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
.++.++.+++++.+ +++++|++++.+. +.+.+..... ++. ..+.||+||+||| ++|..|+++|.+..
T Consensus 97 ~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~-- 163 (588)
T 3ics_A 97 QTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTT---NET--YNEAYDVLILSPG--AKPIVPSIPGIEEA-- 163 (588)
T ss_dssp SCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTTC--
T ss_pred cCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCC---CCE--EEEeCCEEEECCC--CCCCCCCCCCcccC--
Confidence 56677777888776 8999999998755 5555543221 111 5889999999999 78999999988433
Q ss_pred CCCCCcceeecccCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhc
Q 016088 165 SATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRY 237 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~-------~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~ 237 (395)
. .+++.....+.. ...+++++|||+|.+|+|+|..+++.|.+|+++.+.+ +++|..+..+...
T Consensus 164 ----~-~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~---- 233 (588)
T 3ics_A 164 ----K-ALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDYEMAAY---- 233 (588)
T ss_dssp ----T-TEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHH----
T ss_pred ----C-CeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCHHHHHH----
Confidence 1 234333222111 1347999999999999999999999999999999988 5555443332222
Q ss_pred CChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC--CeEEec
Q 016088 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEVIFE 313 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~--~~v~~~ 313 (395)
+.+.+++.+++++.+ |++++. +.|.++
T Consensus 234 -------------------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~ 264 (588)
T 3ics_A 234 -------------------------------------------------VHEHMKNHDVELVFEDGVDALEENGAVVRLK 264 (588)
T ss_dssp -------------------------------------------------HHHHHHHTTCEEECSCCEEEEEGGGTEEEET
T ss_pred -------------------------------------------------HHHHHHHcCCEEEECCeEEEEecCCCEEEEC
Confidence 234466778999887 888877 569999
Q ss_pred CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc-------c------ccCccHH
Q 016088 314 NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G------LYGAAAD 380 (395)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~------~~~a~~~ 380 (395)
+|+++++|.||+|+|+.|+.+ +++..+...+++|++.+| +.++|+.|+|||+|||+. . ...|..|
T Consensus 265 ~g~~i~~D~Vi~a~G~~p~~~-~l~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 342 (588)
T 3ics_A 265 SGSVIQTDMLILAIGVQPESS-LAKGAGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQ 342 (588)
T ss_dssp TSCEEECSEEEECSCEEECCH-HHHHTTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHH
T ss_pred CCCEEEcCEEEEccCCCCChH-HHHhcCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHH
Confidence 999999999999999999984 555554456788999999 678899999999999973 2 1268999
Q ss_pred HHHHHHHhhc
Q 016088 381 AQNIADHINS 390 (395)
Q Consensus 381 a~~~a~~i~~ 390 (395)
|+.+|++|.+
T Consensus 343 g~~aa~~i~g 352 (588)
T 3ics_A 343 GRMLADIIHG 352 (588)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHhcC
Confidence 9999999987
No 44
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-33 Score=269.72 Aligned_cols=298 Identities=17% Similarity=0.160 Sum_probs=202.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc-CCCCceeecc----ccccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~-~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|+++|++|+|||+ +.+||+|.. .+.+...+.. ......++.+.+....+ .....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 58999999999999999999999999999999 678887753 1111100000 00000000000000000 01111
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.+..++....+..+++. ..+ .+..++ ...+.+.. .+ ..+++|++|+||| +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~------~~~v~~~~-~~------~~~~~d~lviAtG--~~ 144 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELAG------PNTVKLLA-SG------KTVTAERIVIAVG--GH 144 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEESS------SSEEEETT-TT------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEee------CCEEEEec-CC------eEEEeCEEEEecC--CC
Confidence 23334444555556663 333 444332 12355521 11 7899999999999 78
Q ss_pred CC-CCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 151 PF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 151 p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
|. .|+++|.+.. +++.++..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+..
T Consensus 145 p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~~ 212 (463)
T 4dna_A 145 PSPHDALPGHELC----------ITSNEAFDLPA-LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQD 212 (463)
T ss_dssp ECCCTTSTTGGGC----------BCHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred cccCCCCCCcccc----------ccHHHHhhhhc-CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHH
Confidence 88 8888887632 33333333333 38999999999999999999999999999999987 344443332
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~ 307 (395)
+.. .+.+.+++.+++++.+ +++++.
T Consensus 213 ~~~-----------------------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~ 239 (463)
T 4dna_A 213 MRR-----------------------------------------------------GLHAAMEEKGIRILCEDIIQSVSA 239 (463)
T ss_dssp HHH-----------------------------------------------------HHHHHHHHTTCEEECSCCEEEEEE
T ss_pred HHH-----------------------------------------------------HHHHHHHHCCCEEECCCEEEEEEE
Confidence 222 1244567788999887 777765
Q ss_pred C-----eEE-ecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Cc
Q 016088 308 N-----EVI-FENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GA 377 (395)
Q Consensus 308 ~-----~v~-~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 377 (395)
+ .|. +++|+ +++|.||+|+|++|+...+ +...+...+++|++.+| +.++|+.|+|||+|||++.+. .|
T Consensus 240 ~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A 317 (463)
T 4dna_A 240 DADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLGLEAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVA 317 (463)
T ss_dssp CTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSSTGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHH
T ss_pred cCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCCccccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHH
Confidence 4 467 77887 9999999999999998544 44443456788999999 567799999999999988644 79
Q ss_pred cHHHHHHHHHhhcc
Q 016088 378 AADAQNIADHINSI 391 (395)
Q Consensus 378 ~~~a~~~a~~i~~~ 391 (395)
..||+.+|++|.+.
T Consensus 318 ~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 318 IHEAMCFIETEYKN 331 (463)
T ss_dssp HHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999865
No 45
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1e-33 Score=270.05 Aligned_cols=297 Identities=17% Similarity=0.244 Sum_probs=199.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeecccc----ccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|... +.+...+.... .......+.+... .......
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 81 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDWP 81 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCHH
Confidence 689999999999999999999999999999997 688887531 11110000000 0000000000000 0112223
Q ss_pred HHHHH-----------HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 82 QFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 82 ~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.+.++ +...+++.+++. +.+ .++.++ . . .|.+ ++ ..++||+||+||| +.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~--~--~--~v~~-~g--------~~~~~d~lviAtG--s~ 141 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLGITR--VDG-HARFVD--A--H--TIEV-EG--------QRLSADHIVIATG--GR 141 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEE--T--T--EEEE-TT--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEe-EEEEcc--C--C--EEEE-CC--------EEEEcCEEEECCC--CC
Confidence 33322 233345556664 444 343343 1 2 3555 32 7799999999999 78
Q ss_pred CCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHH
Q 016088 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYL 230 (395)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~ 230 (395)
|..|+++|.+.. +++.++..... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++|..+..+
T Consensus 142 p~~p~i~G~~~~----------~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~ 209 (463)
T 2r9z_A 142 PIVPRLPGAELG----------ITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDPLL 209 (463)
T ss_dssp ECCCSCTTGGGS----------BCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHH
T ss_pred CCCCCCCCccce----------ecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCHHH
Confidence 888888887422 23333322222 37899999999999999999999999999999987 3444322222
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC
Q 016088 231 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 308 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~ 308 (395)
.. .+.+.+++.+++++.+ +++++.+
T Consensus 210 ~~-----------------------------------------------------~l~~~l~~~gv~i~~~~~v~~i~~~ 236 (463)
T 2r9z_A 210 SA-----------------------------------------------------TLAENMHAQGIETHLEFAVAALERD 236 (463)
T ss_dssp HH-----------------------------------------------------HHHHHHHHTTCEEESSCCEEEEEEE
T ss_pred HH-----------------------------------------------------HHHHHHHHCCCEEEeCCEEEEEEEe
Confidence 11 1234466678999887 7777643
Q ss_pred ----eEEecCCc-EEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---CccH
Q 016088 309 ----EVIFENGH-SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAA 379 (395)
Q Consensus 309 ----~v~~~~g~-~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~ 379 (395)
.+.+++|+ ++++|.||+|+|++|+.+.+ ++..+...+++|++.+| +.++|+.|+|||+|||++.+. .|..
T Consensus 237 ~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~ 315 (463)
T 2r9z_A 237 AQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLGLEAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIA 315 (463)
T ss_dssp TTEEEEEETTCCEEEEESEEEECSCEEESCTTSCHHHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHH
T ss_pred CCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCCchhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHH
Confidence 47778998 89999999999999998544 34333345778999999 567899999999999987543 7899
Q ss_pred HHHHHHHHhhcc
Q 016088 380 DAQNIADHINSI 391 (395)
Q Consensus 380 ~a~~~a~~i~~~ 391 (395)
||+.+|.+|.+.
T Consensus 316 ~g~~aa~~i~g~ 327 (463)
T 2r9z_A 316 AGRRLAERLFDG 327 (463)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHcCC
Confidence 999999999863
No 46
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=7.5e-33 Score=265.53 Aligned_cols=306 Identities=16% Similarity=0.182 Sum_probs=202.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC------CCCcccccC-CCCceeecc-ccccc----cCCCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN------CYASIWKKY-SYDRLRLHL-AKQFC----QLPHLPFPSSY 74 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~------~~gg~~~~~-~~~~l~~~~-~~~~~----~~~~~~~~~~~ 74 (395)
+|||+|||||++|+++|..|+++|++|+|||+.+ .+||+|... +.+...+.. ..... .+..+.....
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~- 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG- 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS-
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC-
Confidence 6899999999999999999999999999999987 355555321 111100000 00000 0000000000
Q ss_pred CCCCCHHHHH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEE
Q 016088 75 PMFVSRAQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (395)
Q Consensus 75 ~~~~~~~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVl 143 (395)
........+. ..+....++.++++ ...+ +..+ +...+.|...++.. ..++||+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g~~------~~~~~d~lvl 148 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEGH-GKLL----AGKKVEVTAADGSS------QVLDTENVIL 148 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESE-EEEC----STTCEEEECTTSCE------EEECCSCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEe----cCCEEEEEcCCCce------EEEEcCEEEE
Confidence 0111222222 22334444556653 4333 3222 23556666544321 6899999999
Q ss_pred eecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCccc
Q 016088 144 ASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL 223 (395)
Q Consensus 144 AtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (395)
||| +.|..|+..+.+.. .++++........ .+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++
T Consensus 149 AtG--~~p~~~~~~~~~~~--------~v~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 216 (476)
T 3lad_A 149 ASG--SKPVEIPPAPVDQD--------VIVDSTGALDFQN-VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFL 216 (476)
T ss_dssp CCC--EEECCCTTSCCCSS--------SEEEHHHHTSCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSS
T ss_pred cCC--CCCCCCCCCCCCcc--------cEEechhhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcC
Confidence 999 67776655443322 3555544444333 48999999999999999999999999999999988 555
Q ss_pred chhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--
Q 016088 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (395)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 301 (395)
|..+..+... +.+.+++.+|+++.+
T Consensus 217 ~~~~~~~~~~-----------------------------------------------------l~~~l~~~Gv~v~~~~~ 243 (476)
T 3lad_A 217 PAVDEQVAKE-----------------------------------------------------AQKILTKQGLKILLGAR 243 (476)
T ss_dssp TTSCHHHHHH-----------------------------------------------------HHHHHHHTTEEEEETCE
T ss_pred cccCHHHHHH-----------------------------------------------------HHHHHHhCCCEEEECCE
Confidence 5433322221 244566788999887
Q ss_pred ceEEeCC----eEEecCC---cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc
Q 016088 302 IESIRGN----EVIFENG---HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG 373 (395)
Q Consensus 302 v~~~~~~----~v~~~~g---~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~ 373 (395)
+++++.+ .+.+.++ +++++|.||+|+|++|+.+.+ +...+...+++|++.+| +.++|+.|+|||+|||++.
T Consensus 244 v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~ 322 (476)
T 3lad_A 244 VTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRG 322 (476)
T ss_dssp EEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCCSSCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSS
T ss_pred EEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCCccccCccccCCCCEeeC-CCcccCCCCEEEEEccCCC
Confidence 7777743 2666654 678999999999999998654 44443445788999999 5677999999999999976
Q ss_pred cc---CccHHHHHHHHHhhccc
Q 016088 374 LY---GAAADAQNIADHINSIL 392 (395)
Q Consensus 374 ~~---~a~~~a~~~a~~i~~~l 392 (395)
+. .|..||+.+|++|.+..
T Consensus 323 ~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 323 AMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCC
T ss_pred cccHHHHHHHHHHHHHHhcCCC
Confidence 44 89999999999998754
No 47
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7e-35 Score=269.58 Aligned_cols=275 Identities=17% Similarity=0.230 Sum_probs=195.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
-||+|||||++|+++|..|++.| +|+|||+++..+ |... .+ +... . .....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~---~l----~~~~---~---------g~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKP---ML----SHYI---A---------GFIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCST---TH----HHHH---T---------TSSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccc---hh----HHHH---h---------CCCCHHHhccCC
Confidence 58999999999999999999999 999999987532 1100 00 0000 0 001111121222
Q ss_pred HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCC
Q 016088 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSAT 167 (395)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~ 167 (395)
.++++++++++ +.+++|+.++... +.|. .++ ..++||+||+||| ++|+.|+++|.+
T Consensus 67 ~~~~~~~~v~~--~~g~~v~~id~~~----~~V~-~~g--------~~~~~d~lViATG--s~p~~p~i~G~~------- 122 (367)
T 1xhc_A 67 LDWYRKRGIEI--RLAEEAKLIDRGR----KVVI-TEK--------GEVPYDTLVLATG--ARAREPQIKGKE------- 122 (367)
T ss_dssp HHHHHHHTEEE--ECSCCEEEEETTT----TEEE-ESS--------CEEECSEEEECCC--EEECCCCSBTGG-------
T ss_pred HHHHHhCCcEE--EECCEEEEEECCC----CEEE-ECC--------cEEECCEEEECCC--CCCCCCCCCCcC-------
Confidence 33445567665 8888899887643 3465 433 6799999999999 789998888732
Q ss_pred CCcceeecccCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhh
Q 016088 168 GTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGG 242 (395)
Q Consensus 168 ~~~~~~~~~~~~~~~~~-----~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 242 (395)
.+++.....+...+ .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++| .+..+.
T Consensus 123 ---~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~~~~----------- 186 (367)
T 1xhc_A 123 ---YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDEELS----------- 186 (367)
T ss_dssp ---GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCHHHH-----------
T ss_pred ---CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCHHHH-----------
Confidence 23333222211111 25899999999999999999999999999999987 4444 221111
Q ss_pred HHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEecCCcEEeC
Q 016088 243 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHF 320 (395)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~~g~~~~~ 320 (395)
..+.+.+++.+|+++.+ +++++.+.+.+++|+ +++
T Consensus 187 ------------------------------------------~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~ 223 (367)
T 1xhc_A 187 ------------------------------------------NMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEG 223 (367)
T ss_dssp ------------------------------------------HHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EEC
T ss_pred ------------------------------------------HHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEc
Confidence 11245567789999998 888888889999998 999
Q ss_pred cEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------ccCccHHHHHHHHHhhcc
Q 016088 321 DSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINSI 391 (395)
Q Consensus 321 D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------~~~a~~~a~~~a~~i~~~ 391 (395)
|.|++|+|++||.+ +++.. ++...+| +.+| +.++|+.|+|||+|||+.. ...|..||+.+|++|.+.
T Consensus 224 D~vi~a~G~~p~~~-ll~~~-gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 224 KVKICAIGIVPNVD-LARRS-GIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp SCEEEECCEEECCH-HHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CEEEECcCCCcCHH-HHHhC-CCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 99999999999985 55554 3333355 7888 5778999999999999642 237899999999999865
No 48
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.3e-33 Score=271.02 Aligned_cols=305 Identities=15% Similarity=0.143 Sum_probs=197.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC--------CCCcccccC-CCCceeecccccc----ccCCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN--------CYASIWKKY-SYDRLRLHLAKQF----CQLPHLPFPS 72 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~--------~~gg~~~~~-~~~~l~~~~~~~~----~~~~~~~~~~ 72 (395)
.+|||+|||||++|+++|..|++.|.+|+|||+.+ .+||+|... +.+...+..+... .....+....
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 36899999999999999999999999999999854 688877532 1111111000000 0000011111
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEE
Q 016088 73 SYPMFVSRAQFIEYLDH-----------YVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~v 141 (395)
..........+.++.+. ..+..+++ .+...+..++. ..+.|.+.++.. ..++||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~----~~v~v~~~~g~~------~~i~~d~l 177 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGP----HRIKATNNKGKE------KIYSAERF 177 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTCCC------CEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeC----CEEEEEcCCCCE------EEEECCEE
Confidence 11112334444444332 23334554 33334444432 344555544322 58999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCc
Q 016088 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVH 221 (395)
Q Consensus 142 VlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~ 221 (395)
|+||| ++|..|+++|.+.+ ++++.++..... .+++++|||+|.+|+|+|..|++.|.+|+++.|+ .
T Consensus 178 ViATG--s~p~~p~i~G~~~~---------~~t~~~~~~l~~-~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~ 243 (519)
T 3qfa_A 178 LIATG--ERPRYLGIPGDKEY---------CISSDDLFSLPY-CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--I 243 (519)
T ss_dssp EECCC--EEECCCCCTTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C
T ss_pred EEECC--CCcCCCCCCCccCc---------eEcHHHHhhhhh-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--c
Confidence 99999 89999999886643 233333333333 3678999999999999999999999999999985 3
Q ss_pred ccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC
Q 016088 222 VLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (395)
Q Consensus 222 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 301 (395)
++|..+..+... +.+.+++.+|+++.+
T Consensus 244 ~l~~~d~~~~~~-----------------------------------------------------~~~~l~~~GV~v~~~ 270 (519)
T 3qfa_A 244 LLRGFDQDMANK-----------------------------------------------------IGEHMEEHGIKFIRQ 270 (519)
T ss_dssp SSTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEEES
T ss_pred ccccCCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeC
Confidence 444443332222 234466678888876
Q ss_pred --ceEEe---C---Ce--EEe--cCCc---EEeCcEEEEccCCCCCcccc-ccCCCCccC-CCCCCCCCCCCcccCCCCe
Q 016088 302 --IESIR---G---NE--VIF--ENGH---SHHFDSIVFCTGFKRSTNVW-LKGDDSMLN-DDGIPKQSYPNHWKGKNGL 364 (395)
Q Consensus 302 --v~~~~---~---~~--v~~--~~g~---~~~~D~vi~atG~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~v 364 (395)
+++++ . +. +.+ .+|. ++++|.|++|+|++||...+ +...+...+ ++|++.+| +.++|+.|+|
T Consensus 271 ~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G~I~Vd-~~~~Ts~~~I 349 (519)
T 3qfa_A 271 FVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGLETVGVKINEKTGKIPVT-DEEQTNVPYI 349 (519)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCSTTTTCCCCTTTCCBCCC-TTSBCSSTTE
T ss_pred CeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCChhhcCcEEcCCCCeEeeC-CCCccCCCCE
Confidence 44443 2 22 222 3552 46899999999999998654 444433345 67999999 5678999999
Q ss_pred EEEeccc-ccc---cCccHHHHHHHHHhhcc
Q 016088 365 YCVGLSR-KGL---YGAAADAQNIADHINSI 391 (395)
Q Consensus 365 ya~Gd~~-~~~---~~a~~~a~~~a~~i~~~ 391 (395)
||+|||+ +.+ ..|..||+.+|++|.+.
T Consensus 350 yA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 350 YAIGDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp EECGGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 9999998 433 37899999999999864
No 49
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=5.6e-35 Score=280.65 Aligned_cols=303 Identities=16% Similarity=0.173 Sum_probs=198.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc-CCCCceeecccc----ccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~-~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (395)
+|||+|||||++|+++|..|+++|.+|+|||+++ +||+|.. .+.+...+.... ....++.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 5899999999999999999999999999999975 8887642 212111110000 0000011100000 0113445
Q ss_pred HHHHHHHHHHHhcCCcce--------e-eeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 82 QFIEYLDHYVSHFNIVPS--------I-RYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~--------i-~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
++.+++.+...++..... + .+.....-. +.+.|.+.++ ..++||+||+||| ++|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~------~~~~v~~~~~--------~~~~~d~lViATG--s~p~ 149 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFL------DEHTLQVDDH--------SQVIAKRIVIATG--SRPN 149 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEE------ETTEEEETTT--------EEEEEEEEEECCC--EECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEe------cCCEEEEcCC--------cEEEeCEEEEccC--CCCc
Confidence 555555444333211100 0 111111101 1234666443 7899999999999 7888
Q ss_pred CCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHH
Q 016088 153 TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGL 232 (395)
Q Consensus 153 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~ 232 (395)
.|++++... ..++++..+..... .+++++|||+|.+|+|+|..|++.|.+|+++.|++ .++|..+..+..
T Consensus 150 ~p~~~~~~~--------~~v~t~~~~~~~~~-~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~ 219 (492)
T 3ic9_A 150 YPEFLAAAG--------SRLLTNDNLFELND-LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDEEMKR 219 (492)
T ss_dssp CCHHHHTTG--------GGEECHHHHTTCSS-CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCHHHHH
T ss_pred CCCCCCccC--------CcEEcHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCHHHHH
Confidence 887544322 13455444444333 38999999999999999999999999999999988 444544333222
Q ss_pred HHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC--
Q 016088 233 VLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-- 308 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-- 308 (395)
.+ .+.+++. |+++.+ +++++.+
T Consensus 220 ~l-----------------------------------------------------~~~l~~~-V~i~~~~~v~~i~~~~~ 245 (492)
T 3ic9_A 220 YA-----------------------------------------------------EKTFNEE-FYFDAKARVISTIEKED 245 (492)
T ss_dssp HH-----------------------------------------------------HHHHHTT-SEEETTCEEEEEEECSS
T ss_pred HH-----------------------------------------------------HHHHhhC-cEEEECCEEEEEEEcCC
Confidence 22 3345555 888877 7777543
Q ss_pred e--EEec--CC--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Ccc
Q 016088 309 E--VIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAA 378 (395)
Q Consensus 309 ~--v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 378 (395)
+ +.+. +| +++++|.||+|+|++||.+.+ +...+...+++|++.+|.+.++++.|+|||+|||++.+. .|.
T Consensus 246 ~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~ 325 (492)
T 3ic9_A 246 AVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLGLENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAA 325 (492)
T ss_dssp SEEEEEECTTCCEEEEEESEEEECSCCEESCSSSCGGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHH
T ss_pred EEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCChhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHH
Confidence 2 4554 67 678999999999999998654 444444567889999985678899999999999987644 889
Q ss_pred HHHHHHHHHhhcc
Q 016088 379 ADAQNIADHINSI 391 (395)
Q Consensus 379 ~~a~~~a~~i~~~ 391 (395)
.||+.+|.+|.+.
T Consensus 326 ~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 326 DDGKVAGTNAGAY 338 (492)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999874
No 50
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.6e-33 Score=265.39 Aligned_cols=302 Identities=16% Similarity=0.200 Sum_probs=203.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceee-cccc---ccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HLAK---QFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~-~~~~---~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||+. .+||+|... ..+...+ .... ....+.......... .....
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV-TIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC-EECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-ccCHH
Confidence 479999999999999999999999999999998 788877532 1110000 0000 000000000000000 01111
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.+.+.+...+++.++++ +.++.+. ++ . +.+.|.+.++ . ..++||+||+||| ++
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-id--~--~~v~V~~~~G----~---~~i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAYF-VD--A--NTVRVVNGDS----A---QTYTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEEE-EE--T--TEEEEEETTE----E---EEEECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEE-cc--C--CeEEEEeCCC----c---EEEEeCEEEEecC--CC
Confidence 23344455666677765 6666543 32 2 5566766542 1 5789999999999 78
Q ss_pred CCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHH
Q 016088 151 PFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYL 230 (395)
Q Consensus 151 p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~ 230 (395)
|..|+++|.+. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+..+
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 213 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEKQM 213 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCHHH
T ss_pred CCCCCCCCccc---------eEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCHHH
Confidence 88888776542 1444444333333 37999999999999999999999999999999987 4555332222
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC
Q 016088 231 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 308 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~ 308 (395)
... +.+.+++.+|+++.+ +++++.+
T Consensus 214 ~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~ 240 (455)
T 1ebd_A 214 AAI-----------------------------------------------------IKKRLKKKGVEVVTNALAKGAEER 240 (455)
T ss_dssp HHH-----------------------------------------------------HHHHHHHTTCEEEESEEEEEEEEE
T ss_pred HHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEEEe
Confidence 211 234456678888887 7777643
Q ss_pred --e--EEec---CCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Cc
Q 016088 309 --E--VIFE---NGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GA 377 (395)
Q Consensus 309 --~--v~~~---~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 377 (395)
+ +.+. +++++++|.||+|+|++||.+.+ ++..+...+++|++.+| +.++|+.|+|||+|||++.+. .|
T Consensus 241 ~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A 319 (455)
T 1ebd_A 241 EDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKA 319 (455)
T ss_dssp TTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSSTTTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHH
T ss_pred CCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCChhhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHH
Confidence 2 3443 45788999999999999998543 34443345678999999 567899999999999987643 78
Q ss_pred cHHHHHHHHHhhcc
Q 016088 378 AADAQNIADHINSI 391 (395)
Q Consensus 378 ~~~a~~~a~~i~~~ 391 (395)
..||+.+|++|.+.
T Consensus 320 ~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 320 SYEGKVAAEAIAGH 333 (455)
T ss_dssp HHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999864
No 51
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1.6e-32 Score=263.31 Aligned_cols=307 Identities=14% Similarity=0.126 Sum_probs=205.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceee-cccc---ccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HLAK---QFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~-~~~~---~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||+|... ..+...+ .... .+..+........ .......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~-~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP-EPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC-CCccCHH
Confidence 5899999999999999999999999999999988899876531 1110000 0000 0000000000000 0111222
Q ss_pred HHH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecC------CCCceeeEEEEeCEEEEe
Q 016088 82 QFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLL------SPGRVIEEYYSGRFLVVA 144 (395)
Q Consensus 82 ~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~------~~~~~~~~~~~~d~vVlA 144 (395)
.+. ..+...+++.++++ +.++.+. + +. +.+.+.+.++. ..++. ..++||+||+|
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~v~v~~~~g~~~~~~~~~g~~--~~i~ad~lViA 155 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF-L--DP--HHLEVSLTAGDAYEQAAPTGEK--KIVAFKNCIIA 155 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE-E--ET--TEEEEEEEEEEETTEEEEEEEE--EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE-c--cC--CEEEEEecCCcccccccccCcc--eEEEcCEEEEC
Confidence 222 22344556667665 6666543 2 22 55666543320 00111 57899999999
Q ss_pred ecCCCCCCCCC-CCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCccc
Q 016088 145 SGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL 223 (395)
Q Consensus 145 tG~~~~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (395)
|| +.|..|+ ++ .+. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++
T Consensus 156 tG--s~p~~~~~i~-~~~---------~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l 221 (482)
T 1ojt_A 156 AG--SRVTKLPFIP-EDP---------RIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLM 221 (482)
T ss_dssp CC--EEECCCSSCC-CCT---------TEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSS
T ss_pred CC--CCCCCCCCCC-ccC---------cEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccc
Confidence 99 6777766 43 221 2444444444333 38999999999999999999999999999999988 555
Q ss_pred chhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--
Q 016088 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (395)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 301 (395)
|..+..+... +.+.+++.+|+++.+
T Consensus 222 ~~~~~~~~~~-----------------------------------------------------l~~~l~~~gV~i~~~~~ 248 (482)
T 1ojt_A 222 QGADRDLVKV-----------------------------------------------------WQKQNEYRFDNIMVNTK 248 (482)
T ss_dssp TTSCHHHHHH-----------------------------------------------------HHHHHGGGEEEEECSCE
T ss_pred cccCHHHHHH-----------------------------------------------------HHHHHHhcCCEEEECCE
Confidence 5443332222 234566778999988
Q ss_pred ceEEeCC----eEEecC----CcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc
Q 016088 302 IESIRGN----EVIFEN----GHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 372 (395)
Q Consensus 302 v~~~~~~----~v~~~~----g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 372 (395)
+.+++.+ .+.+++ |+++++|.||+|+|++||.+.+ ++..+...+++|++.|| ++++|+.|+|||+|||++
T Consensus 249 v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 249 TVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISAEKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVG 327 (482)
T ss_dssp EEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTGGGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTC
T ss_pred EEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCChhhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccC
Confidence 7777643 366777 7789999999999999998544 45553445677999999 578899999999999987
Q ss_pred ccc---CccHHHHHHHHHhhcc
Q 016088 373 GLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 373 ~~~---~a~~~a~~~a~~i~~~ 391 (395)
.+. .|..||+.+|++|.+.
T Consensus 328 ~~~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 328 QPMLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHHHHHHHcCC
Confidence 643 7999999999999864
No 52
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.2e-33 Score=268.35 Aligned_cols=305 Identities=15% Similarity=0.178 Sum_probs=203.3
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCeEEEe--------cCCCCCccccc-CCCCceeecccccc----ccCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQF----CQLPHLPFPS 72 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie--------~~~~~gg~~~~-~~~~~l~~~~~~~~----~~~~~~~~~~ 72 (395)
++||+|||||++|+++|..|++ .|.+|+||| +...+||+|.. .+.+...+...... .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999 999999999 36678888753 22211100000000 0000000000
Q ss_pred CCC-CCCCHHHHHH-----------HHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEE---eecCCCCceeeEEE
Q 016088 73 SYP-MFVSRAQFIE-----------YLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGRVIEEYY 136 (395)
Q Consensus 73 ~~~-~~~~~~~~~~-----------~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~---~~~~~~~~~~~~~~ 136 (395)
... ......++.+ .+...+++. ++++ +.++ ++.++ . ..+.+.. .++. .. ..+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g~-~~~i~--~--~~v~v~~~~~~~g~---~~--~~~ 150 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTF--HQGF-GALQD--N--HTVLVRESADPNSA---VL--ETL 150 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE--EESE-EEEEE--T--TEEEEESSSSTTSC---EE--EEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--EEeE-EEEee--C--CEEEEEeeccCCCC---ce--EEE
Confidence 000 0012223322 333344555 6653 5443 55554 2 3333332 1210 01 578
Q ss_pred EeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhh---cCeeE
Q 016088 137 SGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTS 213 (395)
Q Consensus 137 ~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~---g~~v~ 213 (395)
+||+||+||| ++|..|+++|.+. ++++.++..... .+++++|||+|.+|+|+|..|.+. |.+|+
T Consensus 151 ~~d~lviAtG--s~p~~p~i~g~~~----------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vt 217 (490)
T 1fec_A 151 DTEYILLATG--SWPQHLGIEGDDL----------CITSNEAFYLDE-APKRALCVGGGYISIEFAGIFNAYKARGGQVD 217 (490)
T ss_dssp EEEEEEECCC--EEECCCCSBTGGG----------CBCHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEE
T ss_pred EcCEEEEeCC--CCCCCCCCCCccc----------eecHHHHhhhhh-cCCeEEEECCCHHHHHHHHHHHhhccCcCeEE
Confidence 9999999999 7898888887642 233333333332 378999999999999999999999 99999
Q ss_pred EEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcC
Q 016088 214 LVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKS 293 (395)
Q Consensus 214 ~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (395)
++.+.+ .++|..+..+... +.+.+++
T Consensus 218 lv~~~~-~~l~~~d~~~~~~-----------------------------------------------------l~~~l~~ 243 (490)
T 1fec_A 218 LAYRGD-MILRGFDSELRKQ-----------------------------------------------------LTEQLRA 243 (490)
T ss_dssp EEESSS-SSSTTSCHHHHHH-----------------------------------------------------HHHHHHH
T ss_pred EEEcCC-CcccccCHHHHHH-----------------------------------------------------HHHHHHh
Confidence 999988 4555433322221 2344667
Q ss_pred CcEEEecC--ceEEeCC-----eEEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeE
Q 016088 294 GQIQVLPG--IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLY 365 (395)
Q Consensus 294 ~~i~~~~~--v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vy 365 (395)
.+|+++.+ +++++.+ .+.+++|+++++|.||+|+|+.||.+.+ +...+...+++|++.|| +.++|+.|+||
T Consensus 244 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G~I~Vd-~~~~t~~~~Iy 322 (490)
T 1fec_A 244 NGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQLEKAGVEVAKNGAIKVD-AYSKTNVDNIY 322 (490)
T ss_dssp TTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEE
T ss_pred CCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCchhcCccCCCCCCEEEC-CCCccCCCCEE
Confidence 78999888 7777643 4777899899999999999999998545 45443445778999999 56789999999
Q ss_pred EEeccccccc---CccHHHHHHHHHhhcc
Q 016088 366 CVGLSRKGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 366 a~Gd~~~~~~---~a~~~a~~~a~~i~~~ 391 (395)
|+|||++.+. .|..||+.+|++|.+.
T Consensus 323 A~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 323 AIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp ECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999987543 7899999999999863
No 53
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.3e-33 Score=265.18 Aligned_cols=284 Identities=17% Similarity=0.232 Sum_probs=197.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|++. +.+|+|||+++.++.... ..+. .........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---------~~p~------------~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---------GIPY------------VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---------CCcc------------ccCCCCCHHHhh
Confidence 47999999999999999999998 789999999885542110 0000 001111222333
Q ss_pred HHH-HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016088 85 EYL-DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (395)
Q Consensus 85 ~~l-~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~ 163 (395)
.+. +++.+++++++ +.+++|++++. ..+.+.+.++ + ..+.||+||+||| +.|..|+++|.+..
T Consensus 62 ~~~~~~~~~~~gi~v--~~~~~v~~i~~----~~~~v~~~~g----~---~~~~~d~lviAtG--~~p~~p~i~G~~~~- 125 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDL--HLNAEVIEVDT----GYVRVRENGG----E---KSYEWDYLVFANG--ASPQVPAIEGVNLK- 125 (449)
T ss_dssp ----CTHHHHTTCEE--ETTCEEEEECS----SEEEEECSSS----E---EEEECSEEEECCC--EEECCCSCBTTTST-
T ss_pred hcCHHHHHHhcCcEE--EecCEEEEEec----CCCEEEECCc----e---EEEEcCEEEECCC--CCCCCCCCCCCCCC-
Confidence 332 33446778776 88999998864 3355655432 1 5899999999999 78998888887642
Q ss_pred cCCCCCcceeecccCCC-------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHHHHHh
Q 016088 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLL 235 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~ 235 (395)
.++......+ .....+++++|||+|.+|+|+|..+++.|.+|+++.+++ .++|. .+..+...
T Consensus 126 -------~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~-- 195 (449)
T 3kd9_A 126 -------GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDKEVTDI-- 195 (449)
T ss_dssp -------TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHH--
T ss_pred -------CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHH--
Confidence 2222221111 122357899999999999999999999999999999988 44443 32222221
Q ss_pred hcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe---E
Q 016088 236 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE---V 310 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~---v 310 (395)
+.+.+++. ++++.+ +.+++.++ .
T Consensus 196 ---------------------------------------------------l~~~l~~~-v~i~~~~~v~~i~~~~~v~~ 223 (449)
T 3kd9_A 196 ---------------------------------------------------LEEKLKKH-VNLRLQEITMKIEGEERVEK 223 (449)
T ss_dssp ---------------------------------------------------HHHHHTTT-SEEEESCCEEEEECSSSCCE
T ss_pred ---------------------------------------------------HHHHHHhC-cEEEeCCeEEEEeccCcEEE
Confidence 23445556 888777 77777653 3
Q ss_pred EecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc-------c------ccCc
Q 016088 311 IFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK-------G------LYGA 377 (395)
Q Consensus 311 ~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~-------~------~~~a 377 (395)
.+.+|+++++|.||+|+|++|+.+ +++..+...+++|++.+| +.++|+.|+|||+|||+. . ...|
T Consensus 224 v~~~g~~i~~D~Vv~a~G~~p~~~-l~~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A 301 (449)
T 3kd9_A 224 VVTDAGEYKAELVILATGIKPNIE-LAKQLGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAG 301 (449)
T ss_dssp EEETTEEEECSEEEECSCEEECCH-HHHHTTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHH
T ss_pred EEeCCCEEECCEEEEeeCCccCHH-HHHhCCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHH
Confidence 466888999999999999999984 555554456788999999 678899999999999973 1 1278
Q ss_pred cHHHHHHHHHhhcc
Q 016088 378 AADAQNIADHINSI 391 (395)
Q Consensus 378 ~~~a~~~a~~i~~~ 391 (395)
..||+.+|++|.+.
T Consensus 302 ~~~g~~aa~~i~g~ 315 (449)
T 3kd9_A 302 NKMGYVAGSNIAGK 315 (449)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999865
No 54
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=1.4e-33 Score=270.62 Aligned_cols=299 Identities=18% Similarity=0.190 Sum_probs=201.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc-CCCCceee-cc---ccccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRL-HL---AKQFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~-~~~~~l~~-~~---~~~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|+++|.+|+|||+. .+||+|.. .+.+...+ .. .........+.+... .......
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 589999999999999999999999999999976 68887653 21111100 00 000001111111111 1122333
Q ss_pred HHHHH-----------HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 82 QFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 82 ~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.+.++ +....+..+++. ... .+..++ ...+.+.. ++ ..++||+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~~~----~~~~~v~~-~g--------~~~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRG-HAAFTS----DPKPTIEV-SG--------KKYTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEECS----CSSCEEEE-TT--------EEEECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEe-EEEEee----CCeEEEEE-CC--------EEEEeeEEEEccC--CC
Confidence 33333 333344445553 333 333332 13345653 22 7799999999999 78
Q ss_pred CCCC---CCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhh
Q 016088 151 PFTP---DIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREM 227 (395)
Q Consensus 151 p~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~ 227 (395)
|..| +++|.+.. .++..+...... +++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+
T Consensus 160 p~~p~~~~i~G~~~~----------~~~~~~~~~~~~-~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d 227 (478)
T 3dk9_A 160 PSTPHESQIPGASLG----------ITSDGFFQLEEL-PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFD 227 (478)
T ss_dssp ECCCCTTTSTTGGGS----------BCHHHHTTCCSC-CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSC
T ss_pred CCCCCcCCCCCCcee----------EchHHhhchhhc-CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccC
Confidence 8888 78876622 333333333333 7999999999999999999999999999999988 4445444
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEE
Q 016088 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (395)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~ 305 (395)
..+... +.+.+++.+|+++.+ ++++
T Consensus 228 ~~~~~~-----------------------------------------------------~~~~l~~~gv~i~~~~~v~~i 254 (478)
T 3dk9_A 228 SMISTN-----------------------------------------------------CTEELENAGVEVLKFSQVKEV 254 (478)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHHTTCEEETTEEEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEE
Confidence 332222 234466678999887 7777
Q ss_pred eCC--e----EEecC---C----cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccc
Q 016088 306 RGN--E----VIFEN---G----HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSR 371 (395)
Q Consensus 306 ~~~--~----v~~~~---g----~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~ 371 (395)
+.+ + +.+.+ | +++++|.||+|+|++|+...+ +...+...+++|++.+| +.++|+.|||||+|||+
T Consensus 255 ~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~ 333 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVC 333 (478)
T ss_dssp EECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGG
T ss_pred EEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCCCCCchhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecC
Confidence 643 3 55554 2 578999999999999998645 45443445789999999 57789999999999999
Q ss_pred cccc---CccHHHHHHHHHhhcc
Q 016088 372 KGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 372 ~~~~---~a~~~a~~~a~~i~~~ 391 (395)
+.+. .|..+|+.+|++|.+.
T Consensus 334 ~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 334 GKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCccHhHHHHHHHHHHHHHcCC
Confidence 6644 8899999999999875
No 55
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.5e-33 Score=270.85 Aligned_cols=305 Identities=17% Similarity=0.196 Sum_probs=200.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEec--------CCCCCcccccC-CCCceeeccccc----cccCCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILER--------ENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPS 72 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~--------~~~~gg~~~~~-~~~~l~~~~~~~----~~~~~~~~~~~ 72 (395)
.+|||+|||||++|+++|..|++.|.+|+|||+ ...+||+|... +.+...+..... ......+....
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 368999999999999999999999999999997 55789988532 121111100000 00000111111
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEE
Q 016088 73 SYPMFVSRAQFIEYLDH-----------YVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~v 141 (395)
.........++..+.+. ..+..+++ .+...+..++ ...+.|.+.++.. ..++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g~~------~~~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGGKA------TLLSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTSCE------EEEEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCCce------EEEECCEE
Confidence 11112334444444332 23334544 3333343332 2445555544321 68999999
Q ss_pred EEeecCCCCCCCCC-CCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCC
Q 016088 142 VVASGETSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (395)
Q Consensus 142 VlAtG~~~~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~ 220 (395)
|+||| ++|..|+ ++|.+.. .+++.++..... .+++++|||+|.+|+|+|..|++.|.+|+++.+++
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~- 218 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFWLKE-SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI- 218 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-
Confidence 99999 8999998 8887653 233333333333 37889999999999999999999999999999864
Q ss_pred cccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEec
Q 016088 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (395)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 300 (395)
.+|..+..+... +.+.+++.+|+++.
T Consensus 219 -~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~gv~~~~ 244 (488)
T 3dgz_A 219 -PLRGFDQQMSSL-----------------------------------------------------VTEHMESHGTQFLK 244 (488)
T ss_dssp -SSTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEEE
T ss_pred -ccccCCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEe
Confidence 334333322221 23456667888888
Q ss_pred C--ceEEeC---C--eEEecC---Cc--EEeCcEEEEccCCCCCcccc-ccCCCCccC-CCCCCCCCCCCcccCCCCeEE
Q 016088 301 G--IESIRG---N--EVIFEN---GH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLN-DDGIPKQSYPNHWKGKNGLYC 366 (395)
Q Consensus 301 ~--v~~~~~---~--~v~~~~---g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~~~~~~vya 366 (395)
+ +.+++. + .+.+.+ |+ ++++|.|++|+|+.||...+ +...+...+ ++|++.+| +.++|+.|+|||
T Consensus 245 ~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA 323 (488)
T 3dgz_A 245 GCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVD-AQEATSVPHIYA 323 (488)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTGGGGTCCBCSSSCCBCCC-TTSBCSSTTEEE
T ss_pred CCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCccccCcEecCCCCeEeEC-CCCccCCCCEEE
Confidence 7 677753 2 255554 55 46899999999999998654 344433456 78999999 677899999999
Q ss_pred Eecccc-cc---cCccHHHHHHHHHhhcc
Q 016088 367 VGLSRK-GL---YGAAADAQNIADHINSI 391 (395)
Q Consensus 367 ~Gd~~~-~~---~~a~~~a~~~a~~i~~~ 391 (395)
+|||+. .+ ..|..||+.+|++|.+.
T Consensus 324 ~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 324 IGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp CGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred eEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 999974 33 37899999999999875
No 56
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=3.6e-33 Score=266.41 Aligned_cols=297 Identities=16% Similarity=0.172 Sum_probs=198.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccccccc----cCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQFC----QLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|++.|.+|+|||+++ +||+|... +.+...+......+ ....+..+ . .......
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~-~-~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLK-A-KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEE-C-CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCC-C-CCCcCHH
Confidence 5899999999999999999999999999999987 88887532 11110000000000 00000000 0 0011222
Q ss_pred HHH-------HH----HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 82 QFI-------EY----LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 82 ~~~-------~~----l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.+. ++ +...+++.++++ +.++.+. ++ . .. +.+. + ..++||+||+||| ++
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~~--~--~~--v~v~-g--------~~~~~d~lViATG--s~ 142 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFARL-VG--P--KE--VEVG-G--------ERYGAKSLILATG--SE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEEE-EE--T--TE--EEET-T--------EEEEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEEE-cc--C--CE--EEEc-c--------EEEEeCEEEEcCC--CC
Confidence 222 22 234455667665 5555432 32 2 33 4444 2 7899999999999 77
Q ss_pred CCCCC-CCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHH
Q 016088 151 PFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVY 229 (395)
Q Consensus 151 p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~ 229 (395)
|..|+ +++.. .++++.+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+..
T Consensus 143 p~~p~gi~~~~----------~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 211 (464)
T 2eq6_A 143 PLELKGFPFGE----------DVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDPE 211 (464)
T ss_dssp ECCBTTBCCSS----------SEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCC----------cEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHH
Confidence 88775 55411 2445444444333247999999999999999999999999999999987 455543332
Q ss_pred HHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC
Q 016088 230 LGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG 307 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~ 307 (395)
+... +.+.+++.+|+++.+ +++++.
T Consensus 212 ~~~~-----------------------------------------------------l~~~l~~~gV~i~~~~~v~~i~~ 238 (464)
T 2eq6_A 212 TAAL-----------------------------------------------------LRRALEKEGIRVRTKTKAVGYEK 238 (464)
T ss_dssp HHHH-----------------------------------------------------HHHHHHHTTCEEECSEEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHhcCCEEEcCCEEEEEEE
Confidence 2221 234466678999888 777764
Q ss_pred C----eEEec-C--Cc--EEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc--
Q 016088 308 N----EVIFE-N--GH--SHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY-- 375 (395)
Q Consensus 308 ~----~v~~~-~--g~--~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~-- 375 (395)
+ .+.++ + |+ ++++|.||+|+|++|+.+.+ +...+...+++|++.+| +.++|+.|+|||+|||++.+.
T Consensus 239 ~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~ 317 (464)
T 2eq6_A 239 KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEGLGLEKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLA 317 (464)
T ss_dssp ETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCTTSSHHHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCH
T ss_pred eCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCCCCChhhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccH
Confidence 3 25665 6 77 88999999999999998543 33332334678999999 567899999999999987643
Q ss_pred -CccHHHHHHHHHhhcc
Q 016088 376 -GAAADAQNIADHINSI 391 (395)
Q Consensus 376 -~a~~~a~~~a~~i~~~ 391 (395)
.|..||+.+|++|.+.
T Consensus 318 ~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 318 HKAMREGLIAAENAAGK 334 (464)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 7899999999999864
No 57
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=2.1e-33 Score=268.64 Aligned_cols=302 Identities=17% Similarity=0.163 Sum_probs=201.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeec-cccccc---cCCCC-CCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLH-LAKQFC---QLPHL-PFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~-~~~~~~---~~~~~-~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.+...+. .....+ ..+.. ..+.. ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTIDR 81 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccCH
Confidence 589999999999999999999999999999998 689988632 11110000 000000 00111 00000 011122
Q ss_pred HHHH-------HHHH-----HHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016088 81 AQFI-------EYLD-----HYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 81 ~~~~-------~~l~-----~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
.++. +++. +.+++. ++++ +.+ ++..++ . ..+.|.+.++.. ..++||+||+|||
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~~~~~~--~--~~~~v~~~~g~~------~~~~~d~lviAtG- 147 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITV--VHG-EARFKD--D--QSLTVRLNEGGE------RVVMFDRCLVATG- 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEE--EEE-EEEEEE--T--TEEEEEETTSSE------EEEECSEEEECCC-
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEE--EEE-EEEEcc--C--CEEEEEeCCCce------EEEEeCEEEEeCC-
Confidence 2222 2222 233344 5543 443 355444 2 456666654321 6799999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhh
Q 016088 148 TSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREM 227 (395)
Q Consensus 148 ~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~ 227 (395)
++|+.|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+++ +++| .+
T Consensus 148 -s~p~~p~i~G~~~~--------~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~ 215 (467)
T 1zk7_A 148 -ASPAVPPIPGLKES--------PYWTSTEALASDT-IPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-ED 215 (467)
T ss_dssp -EEECCCCCTTTTTS--------CCBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SC
T ss_pred -CCCCCCCCCCCCcC--------ceecHHHHhcccc-cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CC
Confidence 78999999887653 2344333333333 37999999999999999999999999999999988 5555 32
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEE
Q 016088 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (395)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~ 305 (395)
..+... +.+.+++.+++++.+ ++++
T Consensus 216 ~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~v~~i 242 (467)
T 1zk7_A 216 PAIGEA-----------------------------------------------------VTAAFRAEGIEVLEHTQASQV 242 (467)
T ss_dssp HHHHHH-----------------------------------------------------HHHHHHHTTCEEETTCCEEEE
T ss_pred HHHHHH-----------------------------------------------------HHHHHHhCCCEEEcCCEEEEE
Confidence 222211 234466678888887 7777
Q ss_pred eCC--e--EEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Cc
Q 016088 306 RGN--E--VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GA 377 (395)
Q Consensus 306 ~~~--~--v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a 377 (395)
+.+ . +.++ +.++++|.||+|+|+.|+...+ +...+...+++|++.+| +.++++.|+|||+|||+..+. .|
T Consensus 243 ~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l~l~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A 320 (467)
T 1zk7_A 243 AHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSLALDAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVA 320 (467)
T ss_dssp EEETTEEEEEET-TEEEEESEEEECSCEEESCTTSCGGGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHH
T ss_pred EEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcCCchhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHH
Confidence 543 2 4444 5689999999999999998543 33333345678999998 567899999999999987643 78
Q ss_pred cHHHHHHHHHhhcc
Q 016088 378 AADAQNIADHINSI 391 (395)
Q Consensus 378 ~~~a~~~a~~i~~~ 391 (395)
..||+.+|.+|.+.
T Consensus 321 ~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 321 AAAGTRAAINMTGG 334 (467)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999999764
No 58
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-33 Score=271.67 Aligned_cols=302 Identities=15% Similarity=0.120 Sum_probs=199.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC--------CCCcccc-cCCCCceeeccc----------cccccCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN--------CYASIWK-KYSYDRLRLHLA----------KQFCQLPH 67 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~--------~~gg~~~-~~~~~~l~~~~~----------~~~~~~~~ 67 (395)
+|||+|||||++|+.+|..+++.|.+|+|||+.. .+||++. ..+.|...+... ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 5899999999999999999999999999999643 4788653 222221111000 00011100
Q ss_pred CCCCCCCCCCCCHHHHHHHH-----------HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEE
Q 016088 68 LPFPSSYPMFVSRAQFIEYL-----------DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYY 136 (395)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (395)
.. ......++.++. ...+++.++++ +.....-++ .....|....... +. +.+
T Consensus 122 ~~------~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~---i~G~a~f~~----~~~v~V~~~~~~~-~~---~~i 184 (542)
T 4b1b_A 122 DN------LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKY---INGLAKLKD----KNTVSYYLKGDLS-KE---ETV 184 (542)
T ss_dssp EE------EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE---ECEEEEEEE----TTEEEEEEC--CC-CE---EEE
T ss_pred Cc------ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE---EeeeEEEcC----CCcceEeecccCC-ce---EEE
Confidence 00 001222333222 22334445552 222222111 1333344332211 12 789
Q ss_pred EeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEE
Q 016088 137 SGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVI 216 (395)
Q Consensus 137 ~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~ 216 (395)
+++++||||| ++|..|+..+.... .++.+.+....... +++++|||+|.+|+|+|..++++|.+||++.
T Consensus 185 ~a~~iiIATG--s~P~~P~~~~~~~~--------~~~ts~~~l~l~~l-P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~ 253 (542)
T 4b1b_A 185 TGKYILIATG--CRPHIPDDVEGAKE--------LSITSDDIFSLKKD-PGKTLVVGASYVALECSGFLNSLGYDVTVAV 253 (542)
T ss_dssp EEEEEEECCC--EEECCCSSSBTHHH--------HCBCHHHHTTCSSC-CCSEEEECCSHHHHHHHHHHHHHTCCEEEEE
T ss_pred eeeeEEeccC--CCCCCCCcccCCCc--------cccCchhhhccccC-CceEEEECCCHHHHHHHHHHHhcCCeEEEec
Confidence 9999999999 89998865444322 24555555555555 8999999999999999999999999999998
Q ss_pred ecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcE
Q 016088 217 RSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQI 296 (395)
Q Consensus 217 r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 296 (395)
|+ ..+|..+.+++..+ .+.+++.++
T Consensus 254 ~~--~~L~~~D~ei~~~l-----------------------------------------------------~~~l~~~gi 278 (542)
T 4b1b_A 254 RS--IVLRGFDQQCAVKV-----------------------------------------------------KLYMEEQGV 278 (542)
T ss_dssp SS--CSSTTSCHHHHHHH-----------------------------------------------------HHHHHHTTC
T ss_pred cc--ccccccchhHHHHH-----------------------------------------------------HHHHHhhcc
Confidence 75 45677766655544 344666788
Q ss_pred EEecC--ceEEeCC----eEEecCCcEEeCcEEEEccCCCCCccccccCCCCc-cCCCCCCCCCCCCcccCCCCeEEEec
Q 016088 297 QVLPG--IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSM-LNDDGIPKQSYPNHWKGKNGLYCVGL 369 (395)
Q Consensus 297 ~~~~~--v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~vya~Gd 369 (395)
+++.+ +.+++.. .+.+.++.++.+|.|++|+|++||+..+..+..++ .+..+.+++.+++++|+.|+|||+||
T Consensus 279 ~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGD 358 (542)
T 4b1b_A 279 MFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGD 358 (542)
T ss_dssp EEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCGGGCGGGTTCCEETTTTEECCCTTSBCSSTTEEECTT
T ss_pred eeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCccccCcccceeeecccCceEeccccccccCCCeEEecc
Confidence 88887 6666543 26678888999999999999999997665443333 35556654444788999999999999
Q ss_pred cccc-cc---CccHHHHHHHHHhhcc
Q 016088 370 SRKG-LY---GAAADAQNIADHINSI 391 (395)
Q Consensus 370 ~~~~-~~---~a~~~a~~~a~~i~~~ 391 (395)
++++ ++ .|..+++.++++|.+.
T Consensus 359 v~~~~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 359 VAENVPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp SBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCchhHHHHHHHHHHHHHHHHhcC
Confidence 9866 33 8889999999999864
No 59
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=6.9e-33 Score=265.92 Aligned_cols=306 Identities=14% Similarity=0.114 Sum_probs=203.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCC-CCceee-ccc---cccc-cCCCCCCCCCCCCCCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRL-HLA---KQFC-QLPHLPFPSSYPMFVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~-~~~l~~-~~~---~~~~-~~~~~~~~~~~~~~~~~ 80 (395)
++||+|||||++|+++|..|+++|++|+|||+.+.+||+|.... .+...+ ... ..+. .+.....+.........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 58999999999999999999999999999999888999875321 110000 000 0000 00000000000001122
Q ss_pred HHHH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEE------EEeCEEEE
Q 016088 81 AQFI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY------YSGRFLVV 143 (395)
Q Consensus 81 ~~~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~d~vVl 143 (395)
.++. ..+...+++.++++ +.++.+.. + .+.+.|.+.++.. .. ++||+||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~---~--~~~v~V~~~~G~~------~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFE---D--ETKIRVTPVDGLE------GTVKEDHILDVKNIIV 151 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEES---S--SSEEEEECCTTCT------TCCSSCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEc---c--CCeEEEEecCCCc------ccccccceEEeCEEEE
Confidence 2222 22344556667665 77766542 2 3566676654311 34 99999999
Q ss_pred eecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCccc
Q 016088 144 ASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL 223 (395)
Q Consensus 144 AtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (395)
||| +.|. .++|.+.. ...++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++
T Consensus 152 AtG--s~p~--~~~g~~~~------~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 219 (478)
T 1v59_A 152 ATG--SEVT--PFPGIEID------EEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIG 219 (478)
T ss_dssp CCC--EEEC--CCTTCCCC------SSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSS
T ss_pred CcC--CCCC--CCCCCCCC------CceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccc
Confidence 999 5553 34454321 113455444444333 37999999999999999999999999999999988 455
Q ss_pred chhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--
Q 016088 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (395)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 301 (395)
|..+..+... +.+.+++.+|+++.+
T Consensus 220 ~~~~~~~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~ 246 (478)
T 1v59_A 220 ASMDGEVAKA-----------------------------------------------------TQKFLKKQGLDFKLSTK 246 (478)
T ss_dssp SSSCHHHHHH-----------------------------------------------------HHHHHHHTTCEEECSEE
T ss_pred cccCHHHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCE
Confidence 5433222221 234466678999887
Q ss_pred ceEEeC--C----eEEec-----CCcEEeCcEEEEccCCCCCccc-cccCCCCccCCCCCCCCCCCCcccCCCCeEEEec
Q 016088 302 IESIRG--N----EVIFE-----NGHSHHFDSIVFCTGFKRSTNV-WLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGL 369 (395)
Q Consensus 302 v~~~~~--~----~v~~~-----~g~~~~~D~vi~atG~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd 369 (395)
+++++. + .+.++ +++++++|.||+|+|++||.+. +++..+...+++|++.+| +.++|+.|+|||+||
T Consensus 247 v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD 325 (478)
T 1v59_A 247 VISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEKIGLEVDKRGRLVID-DQFNSKFPHIKVVGD 325 (478)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTTTTCCBCTTSCBCCC-TTSBCSSTTEEECGG
T ss_pred EEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchhcCceeCCCCCEeEC-cCCccCCCCEEEeec
Confidence 788864 2 25555 4578899999999999999853 345543445778999999 567799999999999
Q ss_pred cccccc---CccHHHHHHHHHhhcc
Q 016088 370 SRKGLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 370 ~~~~~~---~a~~~a~~~a~~i~~~ 391 (395)
|+..+. .|..||+.+|++|.+.
T Consensus 326 ~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 326 VTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp GSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred cCCCcccHHHHHHHHHHHHHHHcCC
Confidence 987643 8999999999999864
No 60
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=3.4e-33 Score=268.17 Aligned_cols=298 Identities=16% Similarity=0.185 Sum_probs=201.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc-CCCCceeecc----ccccccCCCCCCCCCCCCCCCHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~-~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (395)
++||+|||||++|+++|..|+++|++|+|||+ ..+||+|.. .+.+...+.. .......+.+.+....+ .....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 58999999999999999999999999999999 678887653 1111110000 00000000000000000 11111
Q ss_pred -----------HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe-ecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 82 -----------QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 82 -----------~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.+..++....+..+++. +...+..++. . .+.+. ++ ..+.+|++|+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~g~~~~i~~----~--~v~v~~~~--------~~~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI---YESRAVFVDE----H--TLELSVTG--------ERISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE---EESCEEEEET----T--EEEETTTC--------CEEEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE---EEeEEEEeeC----C--EEEEecCC--------eEEEeCEEEEccC--C
Confidence 23334445555666663 3334544432 2 25543 22 7899999999999 7
Q ss_pred CCC-CCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhH
Q 016088 150 NPF-TPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMV 228 (395)
Q Consensus 150 ~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~ 228 (395)
.|. .|+++|.+.. .+...+..... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+.
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~~~~-~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~ 232 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFDLEK-LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY 232 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGGCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHHhHHh-cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH
Confidence 888 8888876632 33333333333 38899999999999999999999999999999987 44443332
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEe
Q 016088 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (395)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~ 306 (395)
.+... +.+.+++.+++++.+ |++++
T Consensus 233 ~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~V~~i~ 259 (484)
T 3o0h_A 233 DLRQL-----------------------------------------------------LNDAMVAKGISIIYEATVSQVQ 259 (484)
T ss_dssp HHHHH-----------------------------------------------------HHHHHHHHTCEEESSCCEEEEE
T ss_pred HHHHH-----------------------------------------------------HHHHHHHCCCEEEeCCEEEEEE
Confidence 22221 234456678888886 78877
Q ss_pred CC----eEEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---Ccc
Q 016088 307 GN----EVIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAA 378 (395)
Q Consensus 307 ~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~ 378 (395)
.+ .+.+++|+++++|.||+|+|+.|+...+ +...+...+++|++.+| +.++++.|+|||+|||++.+. .|.
T Consensus 260 ~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~l~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~ 338 (484)
T 3o0h_A 260 STENCYNVVLTNGQTICADRVMLATGRVPNTTGLGLERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAI 338 (484)
T ss_dssp ECSSSEEEEETTSCEEEESEEEECCCEEECCTTCCHHHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHH
T ss_pred eeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCChhhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHH
Confidence 65 4788899999999999999999998544 33343445788999999 677799999999999988644 889
Q ss_pred HHHHHHHHHhhcc
Q 016088 379 ADAQNIADHINSI 391 (395)
Q Consensus 379 ~~a~~~a~~i~~~ 391 (395)
.||+.+|++|.+.
T Consensus 339 ~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 339 HDAMCFVKNAFEN 351 (484)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999864
No 61
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=4.5e-33 Score=261.45 Aligned_cols=285 Identities=19% Similarity=0.207 Sum_probs=196.5
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (395)
|+....++||+|||||++|+++|..|+++|. +|+|||+++.++ |... ..++.+..-.. . .. .+
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~~~~~~~~~~~-~--~~--~~- 65 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRP--PLSKDFMAHGD-A--EK--IR- 65 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSG--GGGTHHHHHCC-G--GG--SB-
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCC--CCCHHHhCCCc-h--hh--hh-
Confidence 6555557899999999999999999999988 599999987543 1100 00000000000 0 00 00
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCC-C
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-R 157 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~-~ 157 (395)
+. .++++++++ +.+++|+.++... +.|.+.++ ..++||+||+||| ++|..|++ +
T Consensus 66 --------~~-~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~g--------~~~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 66 --------LD-CKRAPEVEW--LLGVTAQSFDPQA----HTVALSDG--------RTLPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp --------CC-CTTSCSCEE--EETCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCGGGT
T ss_pred --------HH-HHHHCCCEE--EcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCCCCccC
Confidence 00 233456555 8888899987633 35777654 6899999999999 78888888 8
Q ss_pred CccccccCCCCCcceeecccCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHH
Q 016088 158 GLSSFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLG 231 (395)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~ 231 (395)
|.+ . .+++.....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|+ .+..+.
T Consensus 121 G~~-~--------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~ 190 (408)
T 2gqw_A 121 GAT-M--------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAAPATLA 190 (408)
T ss_dssp TCS-S--------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHHH
T ss_pred CCC-C--------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccccccCHHHH
Confidence 765 2 1232221111 111247999999999999999999999999999999988 44442 111111
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe
Q 016088 232 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE 309 (395)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~ 309 (395)
..+.+.+++.+|+++.+ +++++++.
T Consensus 191 -----------------------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~ 217 (408)
T 2gqw_A 191 -----------------------------------------------------DFVARYHAAQGVDLRFERSVTGSVDGV 217 (408)
T ss_dssp -----------------------------------------------------HHHHHHHHHTTCEEEESCCEEEEETTE
T ss_pred -----------------------------------------------------HHHHHHHHHcCcEEEeCCEEEEEECCE
Confidence 11234566678999888 88887557
Q ss_pred EEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------------cC
Q 016088 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YG 376 (395)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~ 376 (395)
|.+++|+++++|.||+|+|++||.+ +++.. ++...+| +.+| +.++|+.|+|||+|||+... ..
T Consensus 218 v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~-gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~ 293 (408)
T 2gqw_A 218 VLLDDGTRIAADMVVVGIGVLANDA-LARAA-GLACDDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSN 293 (408)
T ss_dssp EEETTSCEEECSEEEECSCEEECCH-HHHHH-TCCBSSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHH
T ss_pred EEECCCCEEEcCEEEECcCCCccHH-HHHhC-CCCCCCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHH
Confidence 8899999999999999999999984 55444 2332356 8888 57789999999999997642 26
Q ss_pred ccHHHHHHHHHhhccc
Q 016088 377 AAADAQNIADHINSIL 392 (395)
Q Consensus 377 a~~~a~~~a~~i~~~l 392 (395)
|..||+.+|++|.+..
T Consensus 294 A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 294 AQNQGIAVARHLVDPT 309 (408)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhcCCC
Confidence 8999999999998754
No 62
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=6.8e-34 Score=278.74 Aligned_cols=290 Identities=17% Similarity=0.198 Sum_probs=205.7
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|..|+++ +.+|+|||+++..+. ... ..+... .. ........+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~-------~~~--~l~~~~---~~-------~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF-------ANC--GLPYHI---SG-------EIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-------CGG--GHHHHH---TS-------SSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc-------ccc--CchHHh---cC-------CcCChHHhhcc
Confidence 4899999999999999999998 789999999986541 100 000000 00 00012223345
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+..++.+++++.+ +++++|++++... +.+.+..... ++. ..+.||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLD---GSE--YQESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCC---CCe--EEEECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 5566666678776 8999999998754 5555543211 111 6899999999999 78999999988643
Q ss_pred CCCCcceeecccCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcC
Q 016088 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYV 238 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~ 238 (395)
.+++.....+. ....+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+..+...+
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l---- 198 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDREMAGFA---- 198 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCHHHHHHH----
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCHHHHHHH----
Confidence 23332222111 11347899999999999999999999999999999988 55554433322222
Q ss_pred ChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC---------
Q 016088 239 PCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--------- 307 (395)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~--------- 307 (395)
.+.+++.+|+++.+ +.+++.
T Consensus 199 -------------------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~ 229 (565)
T 3ntd_A 199 -------------------------------------------------HQAIRDQGVDLRLGTALSEVSYQVQTHVASD 229 (565)
T ss_dssp -------------------------------------------------HHHHHHTTCEEEETCCEEEEEEECCCCCCCG
T ss_pred -------------------------------------------------HHHHHHCCCEEEeCCeEEEEecccccccccc
Confidence 33455667777776 666654
Q ss_pred -----------C---eEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc-
Q 016088 308 -----------N---EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK- 372 (395)
Q Consensus 308 -----------~---~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~- 372 (395)
+ .+.+.+|+++++|.||+|+|++|+.+ ++...+...+++|++.+| +.++|+.|+|||+|||+.
T Consensus 230 ~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~~~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~ 307 (565)
T 3ntd_A 230 AAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ-LARDAGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEE 307 (565)
T ss_dssp GGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCH-HHHHHTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCE
T ss_pred ccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchH-HHHhCCcccCCCCCEEEC-CCcccCCCCEEEeeeeEee
Confidence 2 36678899999999999999999984 555443455788999999 677899999999999973
Q ss_pred ------cc------cCccHHHHHHHHHhhcc
Q 016088 373 ------GL------YGAAADAQNIADHINSI 391 (395)
Q Consensus 373 ------~~------~~a~~~a~~~a~~i~~~ 391 (395)
.. ..|..||+.+|++|.+.
T Consensus 308 ~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 338 (565)
T 3ntd_A 308 QDFVTGQACLVPLAGPANRQGRMAADNMFGR 338 (565)
T ss_dssp EBTTTCCEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCceeecccHHHHHHHHHHHHHHhcCC
Confidence 21 26899999999999875
No 63
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.1e-35 Score=270.77 Aligned_cols=272 Identities=17% Similarity=0.172 Sum_probs=194.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
+.+|+|||||+||+++|..|...+.+|+|||+++..+ |... ..+..+. ...+.+++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~--~l~~~l~------------g~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRP--RLNEIIA------------KNKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGG--GHHHHHH------------SCCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccC--hhhHHHc------------CCCCHHHccCC
Confidence 4689999999999999999977889999999988644 1110 0111100 01111222223
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
..++++++++++ +++++|++++.+. . .|++.++ ..+.||+||+||| ++|+.|+++|.+.
T Consensus 68 ~~~~~~~~~i~~--~~~~~V~~id~~~--~--~v~~~~g--------~~~~yd~lvlAtG--~~p~~p~i~G~~~----- 126 (385)
T 3klj_A 68 KNDWYEKNNIKV--ITSEFATSIDPNN--K--LVTLKSG--------EKIKYEKLIIASG--SIANKIKVPHADE----- 126 (385)
T ss_dssp CHHHHHHTTCEE--ECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCCCTTCSC-----
T ss_pred CHHHHHHCCCEE--EeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEecC--CCcCCCCCCCCCC-----
Confidence 344455667776 8999999998754 3 3777665 7899999999999 7899998887652
Q ss_pred CCCcceeecccCCCCCCC-----CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh-hHHHHHHHhhcCCh
Q 016088 167 TGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLRYVPC 240 (395)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-----~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~~~~~ 240 (395)
+++.....+...+ .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ +++|+. +.....
T Consensus 127 -----v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~-------- 192 (385)
T 3klj_A 127 -----IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLDRDGGL-------- 192 (385)
T ss_dssp -----EECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSCHHHHH--------
T ss_pred -----eEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHH--------
Confidence 2332222221111 26899999999999999999999999999999988 444432 221111
Q ss_pred hhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEecCCcEE
Q 016088 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSH 318 (395)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~~g~~~ 318 (395)
.+.+.+++.+|+++.+ ++++ |+++
T Consensus 193 ---------------------------------------------~~~~~l~~~gV~~~~~~~v~~i---------g~~~ 218 (385)
T 3klj_A 193 ---------------------------------------------FLKDKLDRLGIKIYTNSNFEEM---------GDLI 218 (385)
T ss_dssp ---------------------------------------------HHHHHHHTTTCEEECSCCGGGC---------HHHH
T ss_pred ---------------------------------------------HHHHHHHhCCCEEEeCCEEEEc---------CeEE
Confidence 1244567778998877 6655 6788
Q ss_pred eCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------ccCccHHHHHHHHHhhcc
Q 016088 319 HFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------LYGAAADAQNIADHINSI 391 (395)
Q Consensus 319 ~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------~~~a~~~a~~~a~~i~~~ 391 (395)
++|.||+|+|++||. .++... ++...+| +.+| +.++++.|+|||+|||+.. ...|..||+.+|.+|.+.
T Consensus 219 ~~D~vv~a~G~~p~~-~~~~~~-gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 219 RSSCVITAVGVKPNL-DFIKDT-EIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp HHSEEEECCCEEECC-GGGTTS-CCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred ecCeEEECcCcccCh-hhhhhc-CCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 999999999999998 455555 3444456 8888 6788999999999999762 237999999999999875
Q ss_pred c
Q 016088 392 L 392 (395)
Q Consensus 392 l 392 (395)
-
T Consensus 295 ~ 295 (385)
T 3klj_A 295 D 295 (385)
T ss_dssp C
T ss_pred C
Confidence 4
No 64
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=4.3e-33 Score=265.58 Aligned_cols=302 Identities=15% Similarity=0.184 Sum_probs=201.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccccccc-cC--CCCCCCCCCCCCCCHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQFC-QL--PHLPFPSSYPMFVSRAQ 82 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 82 (395)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+......+ .+ ..+..+.. ....+..+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~-~~~~~~~~ 79 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK-GVELDLPA 79 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC-CEEECHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC-CCccCHHH
Confidence 3799999999999999999999999999999998899987632 11110000000000 00 00000000 00011222
Q ss_pred HH-----------HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016088 83 FI-----------EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 83 ~~-----------~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p 151 (395)
+. ..+...+++.++++ +.++.+ .+ + ...+.|.+ ++ ..+.||+||+||| ++|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~--~~~~~v~~-~g--------~~~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL--S--ERKVLVEE-TG--------EELEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES--S--SSEEEETT-TC--------CEEEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee--c--CCeEEEee-CC--------EEEEecEEEECCC--CCC
Confidence 22 22344555667664 555433 22 1 24444543 32 6789999999999 788
Q ss_pred CCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHH
Q 016088 152 FTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLG 231 (395)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~ 231 (395)
..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++|..+..+.
T Consensus 142 ~~~~~~g~~~~--------~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~~~~ 211 (455)
T 2yqu_A 142 LIPPWAQVDYE--------RVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDLEVS 211 (455)
T ss_dssp CCCTTBCCCSS--------SEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHH
T ss_pred CCCCCCCCCcC--------cEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCHHHH
Confidence 88887775432 3455544444333 37899999999999999999999999999999987 45554333222
Q ss_pred HHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-
Q 016088 232 LVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN- 308 (395)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~- 308 (395)
.. +.+.+++.+++++.+ +++++.+
T Consensus 212 ~~-----------------------------------------------------l~~~l~~~Gv~i~~~~~V~~i~~~~ 238 (455)
T 2yqu_A 212 RA-----------------------------------------------------AERVFKKQGLTIRTGVRVTAVVPEA 238 (455)
T ss_dssp HH-----------------------------------------------------HHHHHHHHTCEEECSCCEEEEEEET
T ss_pred HH-----------------------------------------------------HHHHHHHCCCEEEECCEEEEEEEeC
Confidence 22 133455567888887 7777643
Q ss_pred -e--EEecCCcEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---CccHHH
Q 016088 309 -E--VIFENGHSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---GAAADA 381 (395)
Q Consensus 309 -~--v~~~~g~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~a~~~a 381 (395)
. +.+++|+++++|.||+|+|+.|+.+.+ ++..+...+++|++.+| +.++++.|+|||+|||+..+. .|..||
T Consensus 239 ~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g 317 (455)
T 2yqu_A 239 KGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEG 317 (455)
T ss_dssp TEEEEEETTSCEEEESEEEECSCEEECCTTCCGGGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHH
T ss_pred CEEEEEECCCeEEEcCEEEECcCCCcCCCCCChhhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhH
Confidence 3 455688899999999999999998543 34332334667999999 567789999999999987644 689999
Q ss_pred HHHHHHhhcc
Q 016088 382 QNIADHINSI 391 (395)
Q Consensus 382 ~~~a~~i~~~ 391 (395)
+.+|++|.+.
T Consensus 318 ~~aa~~i~~~ 327 (455)
T 2yqu_A 318 IAAVEHMVRG 327 (455)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHcCC
Confidence 9999999864
No 65
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.9e-33 Score=265.05 Aligned_cols=285 Identities=19% Similarity=0.184 Sum_probs=199.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCC--eEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~--v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
..+||+|||||++|+++|..|+++|.+ |+|||+++..+. .... .++. +. .......++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y-------~~~~--l~~~---~~--------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPY-------ERPP--LSKE---YL--------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCB-------CSGG--GGTT---TT--------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCc-------Cccc--CCHH---HH--------cCCCCHHHh
Confidence 358999999999999999999999986 999999885431 1100 0000 00 000011112
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~ 163 (395)
......+..+.++++ +.+++|+.++... ..|.+.++ ..+.||+||+||| +.|+.|+++|.+..
T Consensus 68 ~~~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~~~~~~i~g~~~~- 130 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEM--KLGAEVVSLDPAA----HTVKLGDG--------SAIEYGKLIWATG--GDPRRLSCVGADLA- 130 (415)
T ss_dssp BSSCHHHHHHTTEEE--EETCCEEEEETTT----TEEEETTS--------CEEEEEEEEECCC--EECCCCBTTSSCCB-
T ss_pred ccCCHHHHHHCCcEE--EeCCEEEEEECCC----CEEEECCC--------CEEEeeEEEEccC--CccCCCCCCCcccc-
Confidence 222234445567665 8888999998643 24666654 6889999999999 78998888886632
Q ss_pred cCCCCCcceeecccCCC---C--CCCC-CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh-hHHHHHHHhh
Q 016088 164 SSATGTGEVIHSTQYKN---G--KPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLR 236 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~~---~--~~~~-~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~ 236 (395)
.++......+ . .... +++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+++. ...+
T Consensus 131 -------~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~------ 196 (415)
T 3lxd_A 131 -------GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVAGEAL------ 196 (415)
T ss_dssp -------TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHH------
T ss_pred -------CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhcCHHH------
Confidence 2222111111 0 0112 7899999999999999999999999999999988 333321 1111
Q ss_pred cCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-----e
Q 016088 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----E 309 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-----~ 309 (395)
...+.+.+++.+++++.+ +++++.+ +
T Consensus 197 -----------------------------------------------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~ 229 (415)
T 3lxd_A 197 -----------------------------------------------SEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTG 229 (415)
T ss_dssp -----------------------------------------------HHHHHHHHHHTTCEEEETCCEEEEEESSSBEEE
T ss_pred -----------------------------------------------HHHHHHHHHhCCCEEEECCEEEEEEecCCcEEE
Confidence 112244566778999887 8888754 4
Q ss_pred EEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc--------------c
Q 016088 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL--------------Y 375 (395)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~--------------~ 375 (395)
|.+++|+++++|.||+|+|+.|+. .++... ++...+| +.+| +.++++.|+|||+|||+... .
T Consensus 230 v~l~dG~~i~aD~Vv~a~G~~p~~-~l~~~~-gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~ 305 (415)
T 3lxd_A 230 VRMQDGSVIPADIVIVGIGIVPCV-GALISA-GASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQ 305 (415)
T ss_dssp EEESSSCEEECSEEEECSCCEESC-HHHHHT-TCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHH
T ss_pred EEeCCCCEEEcCEEEECCCCccCh-HHHHhC-CCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHH
Confidence 888999999999999999999998 455544 3333355 8888 67789999999999997542 3
Q ss_pred CccHHHHHHHHHhhccc
Q 016088 376 GAAADAQNIADHINSIL 392 (395)
Q Consensus 376 ~a~~~a~~~a~~i~~~l 392 (395)
.|..||+.+|++|.+.-
T Consensus 306 ~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 306 NANDMATAAAKDICGAP 322 (415)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 68999999999998753
No 66
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=1.9e-33 Score=266.14 Aligned_cols=275 Identities=16% Similarity=0.199 Sum_probs=189.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|... ++ .+....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHHH
Confidence 46899999999999999999999999999999999999877532 11 1122246677
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+..+.++++++++ +.++.|. .. +.+.+ ..+.||+||+|||.+ .|+.++++|.+..
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~--------~~--v~~~~---------~~~~~d~vvlAtG~~-~~~~~~ipG~~~~--- 231 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG--------RD--ASLPE---------LRRKHVAVLVATGVY-KARDIKAPGSGLG--- 231 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT--------TT--BCHHH---------HHSSCSEEEECCCCC-EECCTTCSCCTTT---
T ss_pred HHHHHHHHCCcEE--EeCCEec--------cE--EEhhH---------hHhhCCEEEEecCCC-CCCCCCCCCCcCC---
Confidence 7777788888776 7776652 11 22222 235699999999942 3667778876532
Q ss_pred CCCCcceeecccC---------CC--------CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCe-eEEEEecCCcccchhh
Q 016088 166 ATGTGEVIHSTQY---------KN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAAK-TSLVIRSPVHVLSREM 227 (395)
Q Consensus 166 ~~~~~~~~~~~~~---------~~--------~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~-v~~~~r~~~~~~p~~~ 227 (395)
.+++..++ .. .....+++|+|||+|.+|+|+|..+.+.|.+ |+++.|++...+|...
T Consensus 232 -----gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~ 306 (456)
T 2vdc_G 232 -----NIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQ 306 (456)
T ss_dssp -----TEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCH
T ss_pred -----CcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCH
Confidence 23322111 00 1224589999999999999999999999874 9999998743344332
Q ss_pred HHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEE
Q 016088 228 VYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESI 305 (395)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~ 305 (395)
..+ +.+++.+|+++.+ +.++
T Consensus 307 ~e~----------------------------------------------------------~~~~~~Gv~~~~~~~~~~i 328 (456)
T 2vdc_G 307 REV----------------------------------------------------------AHAEEEGVEFIWQAAPEGF 328 (456)
T ss_dssp HHH----------------------------------------------------------HHHHHTTCEEECCSSSCCE
T ss_pred HHH----------------------------------------------------------HHHHHCCCEEEeCCCceEE
Confidence 211 0111123333332 2222
Q ss_pred eCCe----------------------EEecCC--cEEeCcEEEEccCCCCCccc-cccCCCCccCCCCCCCCCCCCcccC
Q 016088 306 RGNE----------------------VIFENG--HSHHFDSIVFCTGFKRSTNV-WLKGDDSMLNDDGIPKQSYPNHWKG 360 (395)
Q Consensus 306 ~~~~----------------------v~~~~g--~~~~~D~vi~atG~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (395)
..++ ....+| .++++|.||+|+|+.|+... ++...+...+++|++.+|+..++|+
T Consensus 329 ~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~~~~G~i~vd~~~~~Ts 408 (456)
T 2vdc_G 329 TGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKVTRWGTLLVDHRTKMTN 408 (456)
T ss_dssp EEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCBCTTSSBCCCTTTCBCS
T ss_pred eCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeECCCCCEEECCCCCcCC
Confidence 1111 111123 46899999999999998743 5555544568889999995557899
Q ss_pred CCCeEEEeccccccc---CccHHHHHHHHHhhccc
Q 016088 361 KNGLYCVGLSRKGLY---GAAADAQNIADHINSIL 392 (395)
Q Consensus 361 ~~~vya~Gd~~~~~~---~a~~~a~~~a~~i~~~l 392 (395)
.|+|||+||++.++. .|+.+|+.+|++|.++|
T Consensus 409 ~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L 443 (456)
T 2vdc_G 409 MDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYA 443 (456)
T ss_dssp STTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999999999987644 89999999999998876
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=9.2e-33 Score=265.19 Aligned_cols=303 Identities=16% Similarity=0.150 Sum_probs=198.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecC---C------CCCcccccC-CCCceeecccccc----ccCCCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE---N------CYASIWKKY-SYDRLRLHLAKQF----CQLPHLPFP 71 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~---~------~~gg~~~~~-~~~~l~~~~~~~~----~~~~~~~~~ 71 (395)
.+|||+|||||++|+++|..|++.|.+|+|||+. + .+||+|... +.+...+..+... .....+...
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 4689999999999999999999999999999942 1 378887632 1111110000000 000000110
Q ss_pred CCCCCCCCHHHHHHHHHHH-----------HHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCE
Q 016088 72 SSYPMFVSRAQFIEYLDHY-----------VSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRF 140 (395)
Q Consensus 72 ~~~~~~~~~~~~~~~l~~~-----------~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~ 140 (395)
..........++.++...+ .+..+++ .+.....-++ ...+.+.+.++ + ..++||+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~----~~~v~v~~~~g----~---~~~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVD----SHTLLAKLKSG----E---RTITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE----TTEEEEECTTC----C---EEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEcc----CCEEEEEeCCC----e---EEEEcCE
Confidence 0101123444444444333 2333444 2333333222 24455554432 2 5799999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCC
Q 016088 141 LVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (395)
Q Consensus 141 vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~ 220 (395)
||+||| ++|..|+++|.+.+ .+++.++..... .+++++|||+|.+|+|+|..+++.|.+|+++.|+.
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~- 220 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFSLDR-EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI- 220 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTTCSS-CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhhhhh-cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-
Confidence 999999 89999999988654 233333333333 37899999999999999999999999999998853
Q ss_pred cccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEec
Q 016088 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (395)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 300 (395)
.+|..+..+... +.+.+++.+|+++.
T Consensus 221 -~l~~~d~~~~~~-----------------------------------------------------l~~~l~~~Gv~i~~ 246 (483)
T 3dgh_A 221 -VLRGFDQQMAEL-----------------------------------------------------VAASMEERGIPFLR 246 (483)
T ss_dssp -SSTTSCHHHHHH-----------------------------------------------------HHHHHHHTTCCEEE
T ss_pred -CCcccCHHHHHH-----------------------------------------------------HHHHHHhCCCEEEe
Confidence 344333322221 23446667888888
Q ss_pred C--ceEEeC--Ce---EEecCCc-----EEeCcEEEEccCCCCCccccc-cCCCCccCCCCCCCCCCCCcccCCCCeEEE
Q 016088 301 G--IESIRG--NE---VIFENGH-----SHHFDSIVFCTGFKRSTNVWL-KGDDSMLNDDGIPKQSYPNHWKGKNGLYCV 367 (395)
Q Consensus 301 ~--v~~~~~--~~---v~~~~g~-----~~~~D~vi~atG~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~vya~ 367 (395)
+ +.+++. ++ +.+.++. ++++|.|++|+|++|+...+. ...+...++ |++.+| +.++|+.|+|||+
T Consensus 247 ~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l~~~gl~~~~-G~i~vd-~~~~t~~~~IyA~ 324 (483)
T 3dgh_A 247 KTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNLPNAGVTVQK-DKIPVD-SQEATNVANIYAV 324 (483)
T ss_dssp TEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTGGGTTCCCBT-TBBCCC-TTCBCSSTTEEEC
T ss_pred CCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCchhcCccccC-CEEEEC-cCCccCCCCEEEE
Confidence 7 777764 22 6676654 789999999999999985442 444334456 999999 5678999999999
Q ss_pred ecccc-ccc---CccHHHHHHHHHhhcc
Q 016088 368 GLSRK-GLY---GAAADAQNIADHINSI 391 (395)
Q Consensus 368 Gd~~~-~~~---~a~~~a~~~a~~i~~~ 391 (395)
|||+. .+. .|..||+.+|++|.+.
T Consensus 325 GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 325 GDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp STTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 99974 333 7899999999999865
No 68
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=6e-33 Score=260.83 Aligned_cols=282 Identities=20% Similarity=0.219 Sum_probs=198.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCC--eEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~--v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
++|+|||||++|+++|..|+++|.+ |+|||+++..+ |.... .+....... ...... +..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~--l~~~~~~g~--~~~~~~--~~~------ 63 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPS--LSKAVLDGS--LERPPI--LAE------ 63 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGG--GGTHHHHTS--SSSCCB--SSC------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCcc--ccHHHhCCC--CCHHHh--cCC------
Confidence 4899999999999999999999987 99999988543 11100 000000000 000000 011
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.++..+.++++ +.+++|+.++... ..|.+.++ ..+.||+||+||| +.|+.|+++|.+..
T Consensus 64 --~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~ipG~~~~--- 122 (410)
T 3ef6_A 64 --ADWYGEARIDM--LTGPEVTALDVQT----RTISLDDG--------TTLSADAIVIATG--SRARTMALPGSQLP--- 122 (410)
T ss_dssp --TTHHHHTTCEE--EESCCEEEEETTT----TEEEETTS--------CEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred --HHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC--------CEEECCEEEEccC--CcccCCCCCCcccc---
Confidence 12234557666 8899999998644 24776654 6889999999999 78999988886632
Q ss_pred CCCCcceeecccCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh-hHHHHHHHhhcCC
Q 016088 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLRYVP 239 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~~~~ 239 (395)
.+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+|+. ...+.
T Consensus 123 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~-------- 188 (410)
T 3ef6_A 123 -----GVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRVLGRRIG-------- 188 (410)
T ss_dssp -----TEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHHHCHHHH--------
T ss_pred -----ceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhhcCHHHH--------
Confidence 2333222111 112247999999999999999999999999999999988 333321 11111
Q ss_pred hhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC----eEEec
Q 016088 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVIFE 313 (395)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~----~v~~~ 313 (395)
..+.+.+++.+|+++.+ +++++.+ .|.++
T Consensus 189 ---------------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~ 223 (410)
T 3ef6_A 189 ---------------------------------------------AWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMAS 223 (410)
T ss_dssp ---------------------------------------------HHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEET
T ss_pred ---------------------------------------------HHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEEC
Confidence 11234466678999887 8888776 58899
Q ss_pred CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc------------cCccHHH
Q 016088 314 NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL------------YGAAADA 381 (395)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------------~~a~~~a 381 (395)
||+++++|.||+|+|+.|+. .++... ++...+| +.+| +.++++.|+|||+|||+..+ ..|..||
T Consensus 224 dg~~i~aD~Vv~a~G~~p~~-~l~~~~-gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg 299 (410)
T 3ef6_A 224 DGRSFVADSALICVGAEPAD-QLARQA-GLACDRG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQA 299 (410)
T ss_dssp TSCEEECSEEEECSCEEECC-HHHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHH
T ss_pred CCCEEEcCEEEEeeCCeecH-HHHHhC-CCccCCe-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHH
Confidence 99999999999999999998 455554 3333345 7888 57789999999999997642 4799999
Q ss_pred HHHHHHhhccc
Q 016088 382 QNIADHINSIL 392 (395)
Q Consensus 382 ~~~a~~i~~~l 392 (395)
+.+|++|.+.-
T Consensus 300 ~~aa~~i~g~~ 310 (410)
T 3ef6_A 300 AAVAAAILGKN 310 (410)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHcCCC
Confidence 99999998754
No 69
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=1.1e-32 Score=262.66 Aligned_cols=290 Identities=17% Similarity=0.210 Sum_probs=199.7
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|..|++. |.+|+|||+++..+.... ..+...... .. . ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---------~~~~~~~g~--~~-~------~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC---------GIALYLGKE--IK-N------NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG---------GHHHHHTTC--BG-G------GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc---------cchhhhcCC--cc-c------CCHHHhhh
Confidence 5899999999999999999998 999999999875432110 000000000 00 0 00011111
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.+.+.++++++++ +.+++|+.++.+. +.+.+....+ ++. ..++||+||+||| ++|..|+++|.+..
T Consensus 63 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~---g~~--~~~~~d~lviAtG--s~p~~p~i~g~~~~--- 128 (452)
T 2cdu_A 63 SSPEELSNLGANV--QMRHQVTNVDPET--KTIKVKDLIT---NEE--KTEAYDKLIMTTG--SKPTVPPIPGIDSS--- 128 (452)
T ss_dssp CCHHHHHHTTCEE--EESEEEEEEEGGG--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCCTTTTST---
T ss_pred cCHHHHHHcCCEE--EeCCEEEEEEcCC--CEEEEEecCC---Cce--EEEECCEEEEccC--CCcCCCCCCCCCCC---
Confidence 1233345567765 8899999998755 4544433111 111 6899999999999 78998888887632
Q ss_pred CCCCcceeecccCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHHHHHhhcCC
Q 016088 166 ATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRYVP 239 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-----~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~~~ 239 (395)
.+++...+.+.. ...+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|+ .+..+..
T Consensus 129 -----~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~------- 195 (452)
T 2cdu_A 129 -----RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFDKEFTD------- 195 (452)
T ss_dssp -----TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSCHHHHH-------
T ss_pred -----CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhhhhHHH-------
Confidence 344433222111 1247899999999999999999999999999999988 44442 2222111
Q ss_pred hhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC--CeE--Eec
Q 016088 240 CGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--NEV--IFE 313 (395)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~--~~v--~~~ 313 (395)
.+.+.+++.+++++.+ +++++. +.+ ...
T Consensus 196 ----------------------------------------------~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~ 229 (452)
T 2cdu_A 196 ----------------------------------------------ILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL 229 (452)
T ss_dssp ----------------------------------------------HHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET
T ss_pred ----------------------------------------------HHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe
Confidence 1234566778898887 788764 323 234
Q ss_pred CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------------ccCccHH
Q 016088 314 NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAAAD 380 (395)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~~~ 380 (395)
+|+++++|.||+|+|++||.+ +++.. ...+++|++.|| ++++|+.|+|||+|||+.. ...|..|
T Consensus 230 ~g~~i~~D~vv~a~G~~p~~~-ll~~~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~ 306 (452)
T 2cdu_A 230 DGKEIKSDIAILCIGFRPNTE-LLKGK-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQ 306 (452)
T ss_dssp TSCEEEESEEEECCCEEECCG-GGTTT-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHH
T ss_pred CCCEEECCEEEECcCCCCCHH-HHHHh-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHH
Confidence 788999999999999999985 55544 345678999999 5678999999999999863 2378999
Q ss_pred HHHHHHHhhcc
Q 016088 381 AQNIADHINSI 391 (395)
Q Consensus 381 a~~~a~~i~~~ 391 (395)
|+.+|++|.+.
T Consensus 307 g~~aa~~i~g~ 317 (452)
T 2cdu_A 307 GRLVGLNLTED 317 (452)
T ss_dssp HHHHHHTSSSC
T ss_pred HHHHHHHhCCC
Confidence 99999999864
No 70
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=4e-31 Score=253.94 Aligned_cols=342 Identities=17% Similarity=0.247 Sum_probs=208.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--------------CCeEEEecCCCCCcccccCC-CCceeecccc--ccccC--CC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--------------IPYVILERENCYASIWKKYS-YDRLRLHLAK--QFCQL--PH 67 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--------------~~v~vie~~~~~gg~~~~~~-~~~l~~~~~~--~~~~~--~~ 67 (395)
-|||||||+||+||++|..|.+.+ ...+.+|+.+.++ |..++ +++..++.+. .+..+ |.
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 489999999999999999998753 3567788887766 76543 6766666542 11111 11
Q ss_pred CCC---------------CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCC------CcEEEEEeecC
Q 016088 68 LPF---------------PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEAT------NMWNVKASNLL 126 (395)
Q Consensus 68 ~~~---------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~------~~~~v~~~~~~ 126 (395)
.++ ..+...|+++.++.+|+++++++++..+ +++++|+++.+.+.. +.|+|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~v--rf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVV--AYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGE--EESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCce--EcceEEEeeccccccccccccceEEEEEecCC
Confidence 111 1233467899999999999999987544 999999999986633 35999998865
Q ss_pred CCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCC------CCCCCCCeEEEEcCCCCHHH
Q 016088 127 SPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGME 200 (395)
Q Consensus 127 ~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~g~~a~e 200 (395)
+ ++. ..+.|+.||+||| ..|.+|. ...+ .+.++|+.+|.+ ...+++|+|+|||+|.||+|
T Consensus 195 ~-g~~--~~~~ar~vVlatG--~~P~iP~---~~~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 195 T-GEI--SARRTRKVVIAIG--GTAKMPS---GLPQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp T-CCE--EEEEEEEEEECCC--CEECCCT---TSCC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred C-ceE--EEEEeCEEEECcC--CCCCCCC---CCCC------CcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 4 333 7899999999999 5676665 3445 677999998864 45678999999999999999
Q ss_pred HHHHHHhh--cCeeEEEEecCCcccchhhHHHHHHHh--------hcCChhhHHHHHHHHHHHHhcch------------
Q 016088 201 IALDLANH--AAKTSLVIRSPVHVLSREMVYLGLVLL--------RYVPCGGVDTLMVMLSRLVYGDL------------ 258 (395)
Q Consensus 201 ~a~~l~~~--g~~v~~~~r~~~~~~p~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~------------ 258 (395)
++..|++. +.+|+++.|++ ++.|.....+.+..+ ..++......+........+...
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~-~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~ 339 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDS-AMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDM 339 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSS-SCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHhcCCCceEEEEeCCC-ccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHH
Confidence 99999875 67899999998 444544332222111 11122111111111110000000
Q ss_pred hhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecCceEEeCCeEEecCCcEEeCcEEEEccCCCCCcccccc
Q 016088 259 SKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLK 338 (395)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~ 338 (395)
-+..+..+..... ...+.+..... ........+.+++...+.+++.+++.+.+|+++++|.||+||||+++.+.++.
T Consensus 340 y~~~~~~~~~~~~-~~~l~~~~~v~--~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~ 416 (501)
T 4b63_A 340 YLQRVKNPDETQW-QHRILPERKIT--RVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLL 416 (501)
T ss_dssp HHHHHHCSCGGGC-SSEEECSEEEE--EEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHT
T ss_pred HhhccCCCccccc-ceeecCCccee--eeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhc
Confidence 0000000000000 00000101000 01111233456665556677778899999999999999999999998865543
Q ss_pred CCCC--ccCCCCCCCCCCCCcc-------cCCCCeEEEecc
Q 016088 339 GDDS--MLNDDGIPKQSYPNHW-------KGKNGLYCVGLS 370 (395)
Q Consensus 339 ~~~~--~~~~~g~~~~~~~~~~-------~~~~~vya~Gd~ 370 (395)
.... ..+..|.+.++.++.. ...++||+.|.+
T Consensus 417 ~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 417 SKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp GGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred chhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 3212 2366777777754433 124679999865
No 71
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.8e-32 Score=256.09 Aligned_cols=296 Identities=18% Similarity=0.225 Sum_probs=197.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC-CCCceeeccc----cccccCCC---CCCCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPH---LPFPSSYPMFV 78 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~-~~~~l~~~~~----~~~~~~~~---~~~~~~~~~~~ 78 (395)
++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|... +.+...+... ..+..+.. +..+.. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCcc
Confidence 58999999999999999999999999999999 6789987631 1111000000 00000111 111101 1112
Q ss_pred CHHHHHHH-----------HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016088 79 SRAQFIEY-----------LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 79 ~~~~~~~~-----------l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
+..++..+ +...+++.++++ +.++.+. ++ . . .|.+.+ ..++||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~~--~--~--~v~v~~---------~~~~~d~lviATG- 143 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-LD--G--K--QVEVDG---------QRIQCEHLLLATG- 143 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-EE--T--T--EEEETT---------EEEECSEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-cc--C--C--EEEEee---------EEEEeCEEEEeCC-
Confidence 33333332 334556667765 6555443 22 2 2 355543 6789999999999
Q ss_pred CCCCCCCC-CCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh
Q 016088 148 TSNPFTPD-IRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (395)
Q Consensus 148 ~~~p~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (395)
++|..|+ ++ .+ +.++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+++ +++|..
T Consensus 144 -s~p~~~~~~~-~~---------~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 210 (458)
T 1lvl_A 144 -SSSVELPMLP-LG---------GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTY 210 (458)
T ss_dssp -EEECCBTTBC-CB---------TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTS
T ss_pred -CCCCCCCCCC-cc---------CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-cccccc
Confidence 6777665 33 11 13455555444333 37999999999999999999999999999999988 455533
Q ss_pred hHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceE
Q 016088 227 MVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IES 304 (395)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~ 304 (395)
+..+... +.+.+++.+|+++.+ +++
T Consensus 211 ~~~~~~~-----------------------------------------------------l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 211 DSELTAP-----------------------------------------------------VAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp CHHHHHH-----------------------------------------------------HHHHHHHHTCEEETTCEEEE
T ss_pred CHHHHHH-----------------------------------------------------HHHHHHHCCCEEEECCEEEE
Confidence 3222221 234455668888887 888
Q ss_pred EeCCeEEec--CC--cEEeCcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc---C
Q 016088 305 IRGNEVIFE--NG--HSHHFDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY---G 376 (395)
Q Consensus 305 ~~~~~v~~~--~g--~~~~~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~---~ 376 (395)
++.+.+.+. +| +++++|.||+|+|++||.+.+ ++..+...+++ ++.+| +.++++.|+|||+|||+..+. .
T Consensus 238 i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l~~~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~ 315 (458)
T 1lvl_A 238 YENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHR 315 (458)
T ss_dssp EETTEEEEECSSSCCCEECCSCEEECCCEEECCSSSSGGGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHH
T ss_pred EEeCCEEEEECCCceEEEECCEEEECcCCCcCCCCCCcHhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHH
Confidence 876435554 56 689999999999999998643 34432333555 88888 567799999999999987643 7
Q ss_pred ccHHHHHHHHHhhcc
Q 016088 377 AAADAQNIADHINSI 391 (395)
Q Consensus 377 a~~~a~~~a~~i~~~ 391 (395)
|..||+.+|++|.+.
T Consensus 316 A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 316 AMAQGEMVAEIIAGK 330 (458)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 899999999999863
No 72
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2e-32 Score=260.36 Aligned_cols=287 Identities=17% Similarity=0.191 Sum_probs=197.7
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|..|++. |.+|+|||+++..+.. .. ..+..... .. ....++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~~-------~~~~~~~~--~~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--SA-------GMQLYLEG--KV---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--GG-------GHHHHHTT--SS---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--cc-------cchhhhcC--cc---------CCHHHhhc
Confidence 4899999999999999999998 8999999998865411 00 00000000 00 00111111
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
+..+.++++++++ +.++.|+.++.+. +.+.+..... ++. ..++||+||+||| +.|..|+++|.+..
T Consensus 61 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~~~~~~~---g~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~--- 126 (447)
T 1nhp_A 61 MTGEKMESRGVNV--FSNTEITAIQPKE--HQVTVKDLVS---GEE--RVENYDKLIISPG--AVPFELDIPGKDLD--- 126 (447)
T ss_dssp CCHHHHHHTTCEE--EETEEEEEEETTT--TEEEEEETTT---CCE--EEEECSEEEECCC--EEECCCCSTTTTSB---
T ss_pred CCHHHHHHCCCEE--EECCEEEEEeCCC--CEEEEEecCC---Cce--EEEeCCEEEEcCC--CCcCCCCCCCCCCC---
Confidence 2233345567765 8899999998654 4444433111 111 4689999999999 78998888887632
Q ss_pred CCCCcceeecccCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHHHHHhhc
Q 016088 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLRY 237 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~~ 237 (395)
.+++...+.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++|+ .+..
T Consensus 127 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~-------- 192 (447)
T 1nhp_A 127 -----NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYLDKE-------- 192 (447)
T ss_dssp -----SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTCCHH--------
T ss_pred -----CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccCCHH--------
Confidence 24443322111 11248999999999999999999999999999999987 34332 1111
Q ss_pred CChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe----EE
Q 016088 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE----VI 311 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~----v~ 311 (395)
+...+.+.+++.+++++.+ +++++.++ +.
T Consensus 193 ---------------------------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~ 227 (447)
T 1nhp_A 193 ---------------------------------------------FTDVLTEEMEANNITIATGETVERYEGDGRVQKVV 227 (447)
T ss_dssp ---------------------------------------------HHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEE
T ss_pred ---------------------------------------------HHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEE
Confidence 1112245567788999987 88887652 44
Q ss_pred ecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------------ccCcc
Q 016088 312 FENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYGAA 378 (395)
Q Consensus 312 ~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~a~ 378 (395)
+ +|+++++|.||+|+|++|+.+ +++.. ...+++|++.+| ++++|+.|+|||+|||+.. ...|.
T Consensus 228 ~-~~~~i~~d~vi~a~G~~p~~~-~~~~~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~ 303 (447)
T 1nhp_A 228 T-DKNAYDADLVVVAVGVRPNTA-WLKGT-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNAR 303 (447)
T ss_dssp E-SSCEEECSEEEECSCEEESCG-GGTTT-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHH
T ss_pred E-CCCEEECCEEEECcCCCCChH-HHHhh-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHH
Confidence 4 667899999999999999984 55444 345678999999 5678999999999999752 23799
Q ss_pred HHHHHHHHHhhcc
Q 016088 379 ADAQNIADHINSI 391 (395)
Q Consensus 379 ~~a~~~a~~i~~~ 391 (395)
.||+.+|++|.+.
T Consensus 304 ~qg~~aa~~i~g~ 316 (447)
T 1nhp_A 304 KQGRFAVKNLEEP 316 (447)
T ss_dssp HHHHHHHHTSSSC
T ss_pred HHHHHHHHhhcCC
Confidence 9999999999864
No 73
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=5e-33 Score=261.09 Aligned_cols=283 Identities=18% Similarity=0.212 Sum_probs=196.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
++|+|||||++|+++|..|+++|. +|+|||+++..+ |.... .++.+...... . . ++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~--l~~~~l~~~~~--~---~------~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPP--LSKAYLKSGGD--P---N------SLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGG--GGTGGGGSCCC--T---T------SSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCcc--CCHHHHCCCCC--H---H------HccC
Confidence 589999999999999999999998 899999988543 11110 11111100000 0 0 1111
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.......+.+++. +. ++|+.++... . .+.+.++ ..+.||+||+||| +.|+.|+++|.+..
T Consensus 62 ~~~~~~~~~~i~~--~~-~~v~~id~~~--~--~v~~~~g--------~~~~~d~lvlAtG--~~p~~~~i~g~~~~--- 121 (404)
T 3fg2_P 62 RPEKFFQDQAIEL--IS-DRMVSIDREG--R--KLLLASG--------TAIEYGHLVLATG--ARNRMLDVPNASLP--- 121 (404)
T ss_dssp SCHHHHHHTTEEE--EC-CCEEEEETTT--T--EEEESSS--------CEEECSEEEECCC--EEECCCCSTTTTST---
T ss_pred CCHHHHHhCCCEE--EE-EEEEEEECCC--C--EEEECCC--------CEEECCEEEEeeC--CCccCCCCCCCCCC---
Confidence 1223344557665 66 8999998654 3 3666664 6889999999999 78888888886532
Q ss_pred CCCCcceeecccCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCCh
Q 016088 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPC 240 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (395)
.++......+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ ..+++...
T Consensus 122 -----~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~~------------ 183 (404)
T 3fg2_P 122 -----DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVVT------------ 183 (404)
T ss_dssp -----TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSC------------
T ss_pred -----cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhccC------------
Confidence 2332111111 111247899999999999999999999999999999987 33322110
Q ss_pred hhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-----eEEec
Q 016088 241 GGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-----EVIFE 313 (395)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-----~v~~~ 313 (395)
+.+...+.+.+++.+++++.+ +++++.+ +|.++
T Consensus 184 ----------------------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~ 223 (404)
T 3fg2_P 184 ----------------------------------------PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLS 223 (404)
T ss_dssp ----------------------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET
T ss_pred ----------------------------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeC
Confidence 111112345567788999887 8887654 58889
Q ss_pred CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------------cCccHH
Q 016088 314 NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL-------------YGAAAD 380 (395)
Q Consensus 314 ~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~-------------~~a~~~ 380 (395)
+|+++++|.||+|+|+.|+. .+++.. ++...+| +.+| +.++++.|+|||+|||+... ..|..|
T Consensus 224 dG~~i~aD~Vv~a~G~~p~~-~l~~~~-gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~q 299 (404)
T 3fg2_P 224 DGNTLPCDLVVVGVGVIPNV-EIAAAA-GLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQ 299 (404)
T ss_dssp TSCEEECSEEEECCCEEECC-HHHHHT-TCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHH
T ss_pred CCCEEEcCEEEECcCCccCH-HHHHhC-CCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHH
Confidence 99999999999999999998 455554 3333356 8888 57778999999999997642 368899
Q ss_pred HHHHHHHhhccc
Q 016088 381 AQNIADHINSIL 392 (395)
Q Consensus 381 a~~~a~~i~~~l 392 (395)
|+.+|++|.+.-
T Consensus 300 g~~aa~~i~g~~ 311 (404)
T 3fg2_P 300 ARCVAARLTGDA 311 (404)
T ss_dssp HHHHHHHTTTCC
T ss_pred HHHHHHHhCCCC
Confidence 999999998753
No 74
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.98 E-value=1.1e-31 Score=256.84 Aligned_cols=331 Identities=19% Similarity=0.316 Sum_probs=200.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-----CCeEEEecCCCCCcccccCCC-Cceeeccc--cccccC--CCCCC------
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLA--KQFCQL--PHLPF------ 70 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~-----~~v~vie~~~~~gg~~~~~~~-~~l~~~~~--~~~~~~--~~~~~------ 70 (395)
.+||+|||||++|+++|..|+++| .+|+|||+.+.+| |...++ +...+..+ ..+..+ +..++
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 479999999999999999999999 9999999999887 654433 22222111 000000 00000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCC-CCcE--EEEEeecCCCCceeeEEEEe
Q 016088 71 ---------PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGRVIEEYYSG 138 (395)
Q Consensus 71 ---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~~ 138 (395)
..+...++++.++.+|+.+++++++..+ +++++|++++.+++ .+.| .|.+.++.+ +. ..++|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g--~~--~~~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQS--RYGEEVLRIEPMLSAGQVEALRVISRNADG--EE--LVRTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTE--EESEEEEEEEEEEETTEEEEEEEEEEETTS--CE--EEEEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEEecCCCceEEEEEEEecCCC--ce--EEEEe
Confidence 0111245678999999999999988666 99999999988622 2444 666666421 21 48999
Q ss_pred CEEEEeecCCCCCCCCCCCCccccccCCCCCc--ceeecccCCC-CCCC-----CCCeEEEEcCCCCHHHHHHHHHhh--
Q 016088 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTG--EVIHSTQYKN-GKPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (395)
Q Consensus 139 d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~-~~~~-----~~~~v~ViG~g~~a~e~a~~l~~~-- 208 (395)
|+||+||| +.|..|+. .+.+ .+ .++++..+.. ...+ ++++|+|||+|.+|+|+|..|++.
T Consensus 182 d~lVlAtG--~~p~~p~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQV--FRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCGG--GGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcch--hhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 67776652 2333 33 5677766644 2222 589999999999999999999999
Q ss_pred cCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHH---HHHHHHhcchhh--cCCCCCCCCcchhhccCCCceee
Q 016088 209 AAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMV---MLSRLVYGDLSK--YGIHKPREGPFFMKAAYGKYPVI 283 (395)
Q Consensus 209 g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 283 (395)
+.+|+++.|++ .++|.+...+.+..+ .+.+.+.+.. .....+...... +...++. .. ...+
T Consensus 252 ~~~Vt~v~r~~-~~~p~~~~~~~~~~~---~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~------~~~~ 317 (463)
T 3s5w_A 252 SVQADMILRAS-ALKPADDSPFVNEVF---APKFTDLIYSREHAERERLLREYHNTNYSVVDTD----LI------ERIY 317 (463)
T ss_dssp TEEEEEECSSS-SCCBCCCCHHHHGGG---SHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHH----HH------HHHH
T ss_pred CCeEEEEEeCC-CCcCccCCccchhcc---ChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHH----HH------HHHH
Confidence 88999999998 567765544433321 1111111110 000111100000 0000000 00 0000
Q ss_pred Cchhhhhhc-CCcEEEecC--ceEEeCCe----EEec---CCcE--EeCcEEEEccCCCCC-ccccccCCCCccCCCCCC
Q 016088 284 DAGTCEKIK-SGQIQVLPG--IESIRGNE----VIFE---NGHS--HHFDSIVFCTGFKRS-TNVWLKGDDSMLNDDGIP 350 (395)
Q Consensus 284 ~~~~~~~~~-~~~i~~~~~--v~~~~~~~----v~~~---~g~~--~~~D~vi~atG~~~~-~~~~~~~~~~~~~~~g~~ 350 (395)
...+.+.+. ..+++++.+ |++++.++ +.+. +|+. +++|.||+|||++|+ .+.++....... |.+
T Consensus 318 ~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l~~~~---g~i 394 (463)
T 3s5w_A 318 GVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPLAEYL---GDH 394 (463)
T ss_dssp HHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGGGGGB---C--
T ss_pred HHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHHHHHh---CCc
Confidence 011112222 268888888 77776542 6665 6764 899999999999999 223444332222 788
Q ss_pred CCCCCCcccC----CCCeEEEecccc
Q 016088 351 KQSYPNHWKG----KNGLYCVGLSRK 372 (395)
Q Consensus 351 ~~~~~~~~~~----~~~vya~Gd~~~ 372 (395)
.++..+.... .|+||++|||..
T Consensus 395 ~v~~~~~~~~~~~~~~~Ifa~G~~~~ 420 (463)
T 3s5w_A 395 EIGRDYRLQTDERCKVAIYAQGFSQA 420 (463)
T ss_dssp CCCTTSBCCBCTTBCSEEEESSCCHH
T ss_pred ccCcccccccCCCCCCeEEEcCCCcc
Confidence 8885544333 467999999854
No 75
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.98 E-value=4.1e-32 Score=253.23 Aligned_cols=281 Identities=16% Similarity=0.196 Sum_probs=198.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
++||+|||||++|+++|..|+++| .+|+++|+++ |..|....++ . .+.......++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~-------~------------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLS-------T------------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGG-------G------------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccccc-------H------------HHhCCCCHHHhh
Confidence 589999999999999999999998 4689999875 2222211000 0 001112233443
Q ss_pred H-HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016088 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (395)
Q Consensus 85 ~-~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~ 163 (395)
. ++.++++++++++ +.+++|+.++... +.|.+.+ ..++||+||+||| +.|..|+++|.+..
T Consensus 63 ~~~~~~~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~---------~~~~~d~lviAtG--~~p~~p~i~g~~~~- 124 (384)
T 2v3a_A 63 MAEPGAMAEQLNARI--LTHTRVTGIDPGH----QRIWIGE---------EEVRYRDLVLAWG--AEPIRVPVEGDAQD- 124 (384)
T ss_dssp EECHHHHHHHTTCEE--ECSCCCCEEEGGG----TEEEETT---------EEEECSEEEECCC--EEECCCCCBSTTTT-
T ss_pred ccCHHHHHHhCCcEE--EeCCEEEEEECCC----CEEEECC---------cEEECCEEEEeCC--CCcCCCCCCCcCcC-
Confidence 2 4556667777775 7788898887643 2366543 6799999999999 78888888876532
Q ss_pred cCCCCCcceeecccCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh-hHHHHHHHhhc
Q 016088 164 SSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MVYLGLVLLRY 237 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~~~~~~~~~~ 237 (395)
.+++...+.+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ +++|.. +..+
T Consensus 125 -------~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~~~------- 189 (384)
T 2v3a_A 125 -------ALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLLHPAA------- 189 (384)
T ss_dssp -------CEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHH-------
T ss_pred -------CEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhcccCHHH-------
Confidence 24443333221 11237999999999999999999999999999999987 444432 1111
Q ss_pred CChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC----eEE
Q 016088 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN----EVI 311 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~----~v~ 311 (395)
...+.+.+++.+++++.+ +++++.+ .+.
T Consensus 190 ----------------------------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~ 223 (384)
T 2v3a_A 190 ----------------------------------------------AKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAH 223 (384)
T ss_dssp ----------------------------------------------HHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEE
T ss_pred ----------------------------------------------HHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEE
Confidence 111244566678888887 7777643 477
Q ss_pred ecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc--c-----ccCccHHHHHH
Q 016088 312 FENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK--G-----LYGAAADAQNI 384 (395)
Q Consensus 312 ~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~--~-----~~~a~~~a~~~ 384 (395)
+++|+++++|.||+|+|+.|+.+ +++..+...+ +| +.+| +.++|+.|+|||+|||+. + ...|..||+.+
T Consensus 224 ~~~g~~i~~d~vv~a~G~~p~~~-l~~~~g~~~~-~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~ 299 (384)
T 2v3a_A 224 LSDGEVIPCDLVVSAVGLRPRTE-LAFAAGLAVN-RG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARAL 299 (384)
T ss_dssp ETTSCEEEESEEEECSCEEECCH-HHHHTTCCBS-SS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHH
T ss_pred ECCCCEEECCEEEECcCCCcCHH-HHHHCCCCCC-CC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHH
Confidence 78999999999999999999984 5555433334 57 8888 567899999999999974 2 22568999999
Q ss_pred HHHhhcc
Q 016088 385 ADHINSI 391 (395)
Q Consensus 385 a~~i~~~ 391 (395)
|++|.+.
T Consensus 300 a~~i~g~ 306 (384)
T 2v3a_A 300 AQTLAGN 306 (384)
T ss_dssp HHHHTTC
T ss_pred HHHhcCC
Confidence 9999864
No 76
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.98 E-value=3.7e-32 Score=260.57 Aligned_cols=288 Identities=17% Similarity=0.245 Sum_probs=197.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|++. |.+|+|||+++..+.... ..+... .. . .....++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~---------~~~~~~---~~-~-------~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC---------GLPYVI---SG-A-------IASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG---------GHHHHH---TT-S-------SSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC---------Ccchhh---cC-C-------cCCHHHhh
Confidence 36999999999999999999996 889999999886542110 000000 00 0 00111111
Q ss_pred H-HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEE-eecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccc
Q 016088 85 E-YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSF 162 (395)
Q Consensus 85 ~-~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~ 162 (395)
. ....+.+.+++++ +.+++|+.++.+. +.+.+.. .++ +. ..++||+||+||| +.|..|+++|.+..
T Consensus 96 ~~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~g----~~--~~~~~d~lviAtG--~~p~~p~i~G~~~~ 163 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDA--KVRHEVTKVDTEK--KIVYAEHTKTK----DV--FEFSYDRLLIATG--VRPVMPEWEGRDLQ 163 (480)
T ss_dssp SSCHHHHHHTTCCEE--ESSEEEEEEETTT--TEEEEEETTTC----CE--EEEECSEEEECCC--EEECCCCCBTTTSB
T ss_pred hcCHHHHHhhcCCEE--EeCCEEEEEECCC--CEEEEEEcCCC----ce--EEEEcCEEEECCC--CcccCCCCCCccCC
Confidence 1 1223334557765 8889999998654 5554443 122 11 4799999999999 78998888887532
Q ss_pred ccCCCCCcceeecccCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHh
Q 016088 163 CSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLL 235 (395)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~ 235 (395)
.+++.....+. ....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|..+..+.
T Consensus 164 --------~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~---- 230 (480)
T 3cgb_A 164 --------GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDGDMA---- 230 (480)
T ss_dssp --------TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCHHHH----
T ss_pred --------CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCHHHH----
Confidence 23332222111 01158999999999999999999999999999999887 44442221111
Q ss_pred hcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCe----
Q 016088 236 RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNE---- 309 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~---- 309 (395)
..+.+.+++.+++++.+ +++++.++
T Consensus 231 -------------------------------------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~ 261 (480)
T 3cgb_A 231 -------------------------------------------------EYIYKEADKHHIEILTNENVKAFKGNERVEA 261 (480)
T ss_dssp -------------------------------------------------HHHHHHHHHTTCEEECSCCEEEEEESSBEEE
T ss_pred -------------------------------------------------HHHHHHHHHcCcEEEcCCEEEEEEcCCcEEE
Confidence 11234456678888877 77776543
Q ss_pred EEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc-------------ccC
Q 016088 310 VIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG-------------LYG 376 (395)
Q Consensus 310 v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~-------------~~~ 376 (395)
+.+ ++.++++|.||+|+|++|+.+ +++..+...+++|++.+| +.++++.|+|||+|||+.. ...
T Consensus 262 v~~-~~~~i~~D~vi~a~G~~p~~~-~l~~~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~ 338 (480)
T 3cgb_A 262 VET-DKGTYKADLVLVSVGVKPNTD-FLEGTNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTT 338 (480)
T ss_dssp EEE-TTEEEECSEEEECSCEEESCG-GGTTSCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHH
T ss_pred EEE-CCCEEEcCEEEECcCCCcChH-HHHhCCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHH
Confidence 333 456899999999999999984 555553445778999999 5678899999999999732 237
Q ss_pred ccHHHHHHHHHhhcc
Q 016088 377 AAADAQNIADHINSI 391 (395)
Q Consensus 377 a~~~a~~~a~~i~~~ 391 (395)
|..||+.+|++|.+.
T Consensus 339 A~~qg~~aa~~i~g~ 353 (480)
T 3cgb_A 339 ANKQGRLAGLNMLDK 353 (480)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999999864
No 77
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.98 E-value=3e-32 Score=257.52 Aligned_cols=285 Identities=16% Similarity=0.142 Sum_probs=195.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+|||||++|+++|..|+++|. +|+|||+++..+ |... ..++.+.. . . ....++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~l~~~~~~--~-~--------~~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLP--PLSKAYLA--G-K--------ATAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSG--GGGTTTTT--T-C--------SCSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCC--CCcHHHhC--C-C--------CChHHhc
Confidence 4799999999999999999999998 799999887543 1110 00000000 0 0 0000110
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
....+.+++.++++ +.+++|+.++... . .|.+.++ ..+.||+||+||| ++|+.|+++|.+..
T Consensus 64 ~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~--~v~~~~g--------~~~~~d~lviAtG--~~p~~~~i~G~~~~-- 125 (431)
T 1q1r_A 64 LRTPDAYAAQNIQL--LGGTQVTAINRDR--Q--QVILSDG--------RALDYDRLVLATG--GRPRPLPVASGAVG-- 125 (431)
T ss_dssp SSCHHHHHHTTEEE--ECSCCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--EEECCCGGGTTHHH--
T ss_pred ccCHHHHHhCCCEE--EeCCEEEEEECCC--C--EEEECCC--------CEEECCEEEEcCC--CCccCCCCCCcccC--
Confidence 01123345567665 8889999998643 2 4666554 6799999999999 78888888886532
Q ss_pred CCCCCc--ceeecccCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccch-hhHHHHHHHhh
Q 016088 165 SATGTG--EVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSR-EMVYLGLVLLR 236 (395)
Q Consensus 165 ~~~~~~--~~~~~~~~~~-----~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~-~~~~~~~~~~~ 236 (395)
+ .++......+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ ..+|+ ....+.
T Consensus 126 -----~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~----- 194 (431)
T 1q1r_A 126 -----KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVTAPPVS----- 194 (431)
T ss_dssp -----HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSCHHHH-----
T ss_pred -----CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchhhHHHH-----
Confidence 1 0222111111 111247999999999999999999999999999999887 33332 111111
Q ss_pred cCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC---C---
Q 016088 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG---N--- 308 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~---~--- 308 (395)
..+.+.+++.+++++.+ +++++. +
T Consensus 195 ------------------------------------------------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v 226 (431)
T 1q1r_A 195 ------------------------------------------------AFYEHLHREAGVDIRTGTQVCGFEMSTDQQKV 226 (431)
T ss_dssp ------------------------------------------------HHHHHHHHHHTCEEECSCCEEEEEECTTTCCE
T ss_pred ------------------------------------------------HHHHHHHHhCCeEEEeCCEEEEEEeccCCCcE
Confidence 11234455668888887 777764 2
Q ss_pred -eEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccccc-------------
Q 016088 309 -EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL------------- 374 (395)
Q Consensus 309 -~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~------------- 374 (395)
.+.+++|+++++|.||+|+|++|+.+ +++.. ++...+| +.+| +.++|+.|+|||+|||+...
T Consensus 227 ~~v~~~~G~~i~~D~Vv~a~G~~p~~~-l~~~~-gl~~~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~ 302 (431)
T 1q1r_A 227 TAVLCEDGTRLPADLVIAGIGLIPNCE-LASAA-GLQVDNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESV 302 (431)
T ss_dssp EEEEETTSCEEECSEEEECCCEEECCH-HHHHT-TCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSH
T ss_pred EEEEeCCCCEEEcCEEEECCCCCcCcc-hhhcc-CCCCCCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHH
Confidence 47788999999999999999999984 55554 2333355 8888 56789999999999997642
Q ss_pred cCccHHHHHHHHHhhccc
Q 016088 375 YGAAADAQNIADHINSIL 392 (395)
Q Consensus 375 ~~a~~~a~~~a~~i~~~l 392 (395)
..|..||+.+|++|.+..
T Consensus 303 ~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 303 PNALEQARKIAAILCGKV 320 (431)
T ss_dssp HHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 258899999999998653
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=2.1e-32 Score=262.32 Aligned_cols=300 Identities=17% Similarity=0.212 Sum_probs=195.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.+.+|||||||++|+++|..|.+.+++|+|||+++.+- |. | .++... ....+..++..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~-------~~------P-lL~~va--------~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL-------FT------P-LLPSAP--------VGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE-------CG------G-GGGGTT--------TTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc-------cc------c-chhHHh--------hccccHHHhhh
Confidence 35689999999999999999999999999999987210 00 0 000110 01111122222
Q ss_pred HHHHHHH--hcCCcceeeeeeeEEEeEEeCCCCcEEEEEeec------------CCCCceeeEEEEeCEEEEeecCCCCC
Q 016088 86 YLDHYVS--HFNIVPSIRYQRSVESASYDEATNMWNVKASNL------------LSPGRVIEEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 86 ~l~~~~~--~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~------------~~~~~~~~~~~~~d~vVlAtG~~~~p 151 (395)
.++.... +.++. +...+|++|+.+. ...++...+. ...++. .++.||+||+||| +.|
T Consensus 99 p~~~~~~~~~~~v~---~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~--~~i~YD~LViAtG--s~~ 169 (502)
T 4g6h_A 99 PIVNFALKKKGNVT---YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEP--AEIKYDYLISAVG--AEP 169 (502)
T ss_dssp EHHHHHTTCSSCEE---EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCC--EEEECSEEEECCC--CEE
T ss_pred hHHHHHHhhcCCeE---EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCc--eEEeCCEEEEcCC--ccc
Confidence 2233222 22333 5567899998765 4433332110 000111 7899999999999 899
Q ss_pred CCCCCCCccccccCCCCCcceeeccc----------CCCCCC---CCCCeEEEEcCCCCHHHHHHHHHhhc---------
Q 016088 152 FTPDIRGLSSFCSSATGTGEVIHSTQ----------YKNGKP---YGGKNVLVVGSGNSGMEIALDLANHA--------- 209 (395)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~---~~~~~v~ViG~g~~a~e~a~~l~~~g--------- 209 (395)
+.+++||.++.+.+++.........+ .....+ ....+++|||+|++|+|+|..|++.+
T Consensus 170 ~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~ 249 (502)
T 4g6h_A 170 NTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLP 249 (502)
T ss_dssp CCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCH
T ss_pred ccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcc
Confidence 99999998765222211111000000 000000 11357999999999999999998753
Q ss_pred -----CeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeC
Q 016088 210 -----AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVID 284 (395)
Q Consensus 210 -----~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
.+|+++.+.+ .++|..+..+...+
T Consensus 250 ~~~~~~~V~lve~~~-~il~~~~~~~~~~~-------------------------------------------------- 278 (502)
T 4g6h_A 250 ALAEEVQIHLVEALP-IVLNMFEKKLSSYA-------------------------------------------------- 278 (502)
T ss_dssp HHHHHCEEEEECSSS-SSSTTSCHHHHHHH--------------------------------------------------
T ss_pred cccccceeEEecccc-ccccCCCHHHHHHH--------------------------------------------------
Confidence 4699999888 56665544433333
Q ss_pred chhhhhhcCCcEEEecC--ceEEeCCeEEec----CC----cEEeCcEEEEccCCCCCc--cccccCCCCccCCCCCCCC
Q 016088 285 AGTCEKIKSGQIQVLPG--IESIRGNEVIFE----NG----HSHHFDSIVFCTGFKRST--NVWLKGDDSMLNDDGIPKQ 352 (395)
Q Consensus 285 ~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~----~g----~~~~~D~vi~atG~~~~~--~~~~~~~~~~~~~~g~~~~ 352 (395)
.+.+++.+|+++.+ |++++++++.+. || +++++|.||||+|.+|+. ..+........+.+|++.|
T Consensus 279 ---~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~V 355 (502)
T 4g6h_A 279 ---QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAV 355 (502)
T ss_dssp ---HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEB
T ss_pred ---HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeE
Confidence 45577789999999 999999986653 55 368999999999999984 1233333345577899999
Q ss_pred CCCCcccCCCCeEEEeccccccc-----CccHHHHHHHHHhhc
Q 016088 353 SYPNHWKGKNGLYCVGLSRKGLY-----GAAADAQNIADHINS 390 (395)
Q Consensus 353 ~~~~~~~~~~~vya~Gd~~~~~~-----~a~~~a~~~a~~i~~ 390 (395)
|+..+.++.|||||+|||+..+. .|.+||..+|+||.+
T Consensus 356 d~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 356 NDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDK 398 (502)
T ss_dssp CTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 95444458999999999976422 899999999999965
No 79
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=1.9e-30 Score=255.39 Aligned_cols=303 Identities=16% Similarity=0.205 Sum_probs=191.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecC-C-------CCCccccc-CCCCceeecccc-------ccccCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-N-------CYASIWKK-YSYDRLRLHLAK-------QFCQLPHLP 69 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~-~-------~~gg~~~~-~~~~~l~~~~~~-------~~~~~~~~~ 69 (395)
..+||+|||||++|+++|..|+++|++|+|||+. + .+||+|.. ..++...+.... ....+. ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g-~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG-WS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC-cc
Confidence 3689999999999999999999999999999973 2 36776542 211111110000 000000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHh-----------cCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEe
Q 016088 70 FPSSYPMFVSRAQFIEYLDHYVSH-----------FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSG 138 (395)
Q Consensus 70 ~~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 138 (395)
.+.. .......++.++++.+++. .+++ ........++. ....+...++ +. ..++|
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~~----~~v~v~~~~g----~~--~~~~~ 250 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLISP----HEVQITDKNQ----KV--STITG 250 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC----CE--EEEEE
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcCC----CEEEEEeCCC----Ce--EEEEe
Confidence 0000 0123445666665544332 2333 22222322221 2222333222 11 57999
Q ss_pred CEEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEec
Q 016088 139 RFLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (395)
Q Consensus 139 d~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~ 218 (395)
|+||+||| ++|+.|+++|.+.+ .+++.+.... ...+++++|||+|.+|+|+|..|++.|.+||++.|+
T Consensus 251 d~lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 251 NKIILATG--ERPKYPEIPGAVEY---------GITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp EEEEECCC--EEECCCSSTTHHHH---------CEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEeCC--CCCCCCCCCCcccc---------eEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 99999999 78999999987654 2333333222 234788999999999999999999999999999987
Q ss_pred CCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEE
Q 016088 219 PVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQV 298 (395)
Q Consensus 219 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 298 (395)
.++|..+..+...+ .+.+++.+|++
T Consensus 319 --~~l~~~d~~~~~~~-----------------------------------------------------~~~l~~~gv~i 343 (598)
T 2x8g_A 319 --ILLRGFDQQMAEKV-----------------------------------------------------GDYMENHGVKF 343 (598)
T ss_dssp --CSSTTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEE
T ss_pred --cCcCcCCHHHHHHH-----------------------------------------------------HHHHHhCCCEE
Confidence 33443332222211 23345567777
Q ss_pred ecC--ceEEe--------C---CeEE----ecCCcEEe--CcEEEEccCCCCCcccc-ccCCCCccCCCCCCCCCCCCcc
Q 016088 299 LPG--IESIR--------G---NEVI----FENGHSHH--FDSIVFCTGFKRSTNVW-LKGDDSMLNDDGIPKQSYPNHW 358 (395)
Q Consensus 299 ~~~--v~~~~--------~---~~v~----~~~g~~~~--~D~vi~atG~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~ 358 (395)
+.+ +.+++ . +.+. +.+|++++ +|.||+|+|++||.+.+ +...+...+++|++.+| +.++
T Consensus 344 ~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G~i~vd-~~~~ 422 (598)
T 2x8g_A 344 AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNGRVVCT-DDEQ 422 (598)
T ss_dssp EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTSCBCCC-TTSB
T ss_pred EECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCchhcCceECCCCcEEeC-CCCc
Confidence 766 44442 1 2232 35777665 99999999999998544 33333345778999999 5677
Q ss_pred cCCCCeEEEeccccc-c---cCccHHHHHHHHHhhcc
Q 016088 359 KGKNGLYCVGLSRKG-L---YGAAADAQNIADHINSI 391 (395)
Q Consensus 359 ~~~~~vya~Gd~~~~-~---~~a~~~a~~~a~~i~~~ 391 (395)
|+.|+|||+|||+.+ + ..|..+|+.+|++|.+.
T Consensus 423 ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 423 TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 999999999999543 2 37899999999999864
No 80
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=3.8e-31 Score=248.96 Aligned_cols=284 Identities=16% Similarity=0.167 Sum_probs=195.2
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
++|+|||||++|+++|..|++ .|.+|+|||+++.++.... ++. .........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-----------------~~~-----~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-----------------LPH-----VAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-----------------SCC-----CCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-----------------hhh-----cccCCcCHHHHH
Confidence 489999999999999999999 8999999999884321100 000 001112222334
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
..+.+.+++++++. +.+ +|+.++.+. .. |++.++.. +. ..+.||+||+||| +.|+.|.++|.+..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~--~~--V~~~~g~~--~~--~~~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS--SM--VYYTKPDG--SM--AEEEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT--TE--EEEECTTS--CE--EEEECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC--CE--EEEccCCc--cc--ceeeCCEEEECCC--CCcCccCCCChhhc--
Confidence 45566666778774 544 898888654 33 66555421 11 5799999999999 68888888887643
Q ss_pred CCCCCcceeecccCCCCCCCC------CCeEEEEcCC-------------------C------CHHHHHHHHH----hhc
Q 016088 165 SATGTGEVIHSTQYKNGKPYG------GKNVLVVGSG-------------------N------SGMEIALDLA----NHA 209 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~------~~~v~ViG~g-------------------~------~a~e~a~~l~----~~g 209 (395)
..+...+.+...+. .++++|||+| . .++|+|..++ +.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 22222222111111 2567799999 2 3778875544 556
Q ss_pred ----CeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCc
Q 016088 210 ----AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDA 285 (395)
Q Consensus 210 ----~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (395)
.+|+++.+.+ .+|....... .
T Consensus 198 ~~~~~~v~~~~~~~--~l~~~~~~~~-----------------------------------------------------~ 222 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE--YLSDLSPNSR-----------------------------------------------------K 222 (409)
T ss_dssp CTTTEEEEEECSSS--SSTTBCHHHH-----------------------------------------------------H
T ss_pred CCCCeEEEEEeCCc--cccccCHHHH-----------------------------------------------------H
Confidence 3799998876 3332221111 1
Q ss_pred hhhhhhcCCcEEEecC--ceEEeCCeEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCccc-CCC
Q 016088 286 GTCEKIKSGQIQVLPG--IESIRGNEVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWK-GKN 362 (395)
Q Consensus 286 ~~~~~~~~~~i~~~~~--v~~~~~~~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~ 362 (395)
.+.+.+++.+|+++.+ |++++.+++.+++|+++++|.||+|+|+.|+. .+......+.+++|++.+|+ .+++ +.|
T Consensus 223 ~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~-~l~~~~~~l~~~~G~i~vd~-~~~~~~~~ 300 (409)
T 3h8l_A 223 AVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNP-ALKNSTPDLVDDGGFIPTDL-NMVSIKYD 300 (409)
T ss_dssp HHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCH-HHHTSCGGGSCTTSCBCBBT-TSBBSSCT
T ss_pred HHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccH-HHHhccccCcCCCCCEEeCc-ccccCCCC
Confidence 1244566778999987 99999999999999999999999999999984 33333123567889999995 5555 899
Q ss_pred CeEEEeccccc-----ccCccHHHHHHHHHhhccc
Q 016088 363 GLYCVGLSRKG-----LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 363 ~vya~Gd~~~~-----~~~a~~~a~~~a~~i~~~l 392 (395)
|||++|||+.. ...|..||..+|++|.+.+
T Consensus 301 ~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 301 NVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp TEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999863 2379999999999999887
No 81
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=5.1e-31 Score=249.91 Aligned_cols=288 Identities=13% Similarity=0.157 Sum_probs=198.0
Q ss_pred CCeEEEECCChHHHHHHHHHhh---cCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~---~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
.+||+|||||++|+++|..|++ .+.+|+|||+++.+.. . +... . .........++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~-------~------~~~~-~--------~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQF-------V------PSNP-W--------VGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEEC-------G------GGHH-H--------HHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcc-------c------CCcc-c--------cccCccCHHHH
Confidence 3699999999999999999999 7999999999873210 0 0000 0 00122344566
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccc
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFC 163 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~ 163 (395)
...+.+.+++.+++. ...+|+.++.+. . .|++.++ ..+.||+||+||| +.|+.|.++|.+..
T Consensus 62 ~~~l~~~~~~~gv~~---~~~~v~~id~~~--~--~V~~~~g--------~~i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIHF---IAQSAEQIDAEA--Q--NITLADG--------NTVHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCEE---ECSCEEEEETTT--T--EEEETTS--------CEEECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCEE---EEeEEEEEEcCC--C--EEEECCC--------CEEECCEEEECCC--CCcCcccCCCCCcc-
Confidence 666677777778774 467999998654 3 3776654 6799999999999 78888888888753
Q ss_pred cCCCCCcceeecccCCCCCC--------CCCCeEEEEcCCCC----H--HHHHHHH----HhhcCe-----eEEEEecCC
Q 016088 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNS----G--MEIALDL----ANHAAK-----TSLVIRSPV 220 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~--------~~~~~v~ViG~g~~----a--~e~a~~l----~~~g~~-----v~~~~r~~~ 220 (395)
.+.....+...+... ..+++++|||+|.+ | +|+|..+ .+.|.+ |+++.+.+
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~- 197 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP- 197 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-
Confidence 233333222221110 11445789998554 4 8888554 455543 99999887
Q ss_pred cccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEec
Q 016088 221 HVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLP 300 (395)
Q Consensus 221 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 300 (395)
.+.+.... . .+.....+.+.+++.+|+++.
T Consensus 198 ~~~~~~l~--------~------------------------------------------~~~~~~~~~~~l~~~gI~~~~ 227 (437)
T 3sx6_A 198 YIGHLGIQ--------G------------------------------------------VGDSKGILTKGLKEEGIEAYT 227 (437)
T ss_dssp STTCTTTT--------C------------------------------------------CTTHHHHHHHHHHHTTCEEEC
T ss_pred cccccccC--------c------------------------------------------chHHHHHHHHHHHHCCCEEEc
Confidence 22110000 0 001112234567778999999
Q ss_pred C--ceEEeCCeEEecC---------CcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCccc-CCCCeEEEe
Q 016088 301 G--IESIRGNEVIFEN---------GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWK-GKNGLYCVG 368 (395)
Q Consensus 301 ~--v~~~~~~~v~~~~---------g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~vya~G 368 (395)
+ +++++.+++.+++ ++++++|.+++++|+.++. .+.... ++.+++|++.+|+ ++++ +.|||||+|
T Consensus 228 ~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~-~~~~~~-gl~~~~G~i~Vd~-~l~t~~~~~Ifa~G 304 (437)
T 3sx6_A 228 NCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVP-AVAGVE-GLCNPGGFVLVDE-HQRSKKYANIFAAG 304 (437)
T ss_dssp SEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCH-HHHTST-TTBCTTSCBCBCT-TSBBSSCTTEEECG
T ss_pred CCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCch-hhhccc-cccCCCCcEEeCh-hccCCCCCCEEEEE
Confidence 8 9999999888775 6789999999999999875 233322 4578899999995 5555 899999999
Q ss_pred cccccc---------------cCccHHHHHHHHHhhcccC
Q 016088 369 LSRKGL---------------YGAAADAQNIADHINSILS 393 (395)
Q Consensus 369 d~~~~~---------------~~a~~~a~~~a~~i~~~l~ 393 (395)
||+..+ ..|..||..+|+||.+.|.
T Consensus 305 D~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 305 IAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp GGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 997632 2799999999999998773
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.96 E-value=6.9e-30 Score=242.16 Aligned_cols=297 Identities=16% Similarity=0.131 Sum_probs=189.5
Q ss_pred CCeEEEECCChHHHHHHHHHhh-c------CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~------~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (395)
.+||+|||||++|+++|..|++ . +.+|+|||+.+.++|.|+.... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 5799999999999999999999 7 8999999999888888764211 22234
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC-CCCCCCCC
Q 016088 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN-PFTPDIRG 158 (395)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~-p~~~~~~g 158 (395)
..++..++.+++++.++.+ +.+..+ . .. |++.+ ..+.||+||+||| +. |+.++++|
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v------~--~~--v~~~~---------~~~~~d~lViAtG--~~~~~~~~ipG 116 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV------G--EH--VQPGE---------LSERYDAVIYAVG--AQSDRMLNIPG 116 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB------T--TT--BCHHH---------HHHHSSEEEECCC--CCEECCCCCTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE------C--CE--EEECC---------CeEeCCEEEEeeC--CCCCCCCCCCC
Confidence 4567778888777777654 555332 1 11 33333 3468999999999 54 67778888
Q ss_pred ccccccCCCCCcceeecccC-----------CCCCCCCCCeEEEEcCCCCHHHHHHHHHhh-------------------
Q 016088 159 LSSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH------------------- 208 (395)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~------------------- 208 (395)
.+ + .+ +++..++ .+...+.+++++|||+|.+|+|+|..|++.
T Consensus 117 ~~-~------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~ 188 (456)
T 1lqt_A 117 ED-L------PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP 188 (456)
T ss_dssp TT-S------TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT
T ss_pred CC-C------CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH
Confidence 76 3 23 4443322 222334689999999999999999999974
Q ss_pred -c-CeeEEEEecCCcccchhh----HHHHHHHh---hcCChhhH---HHHH---HHHHHHHhcchhhcCCCCCCCCcchh
Q 016088 209 -A-AKTSLVIRSPVHVLSREM----VYLGLVLL---RYVPCGGV---DTLM---VMLSRLVYGDLSKYGIHKPREGPFFM 273 (395)
Q Consensus 209 -g-~~v~~~~r~~~~~~p~~~----~~~~~~~~---~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (395)
+ .+|+++.|++. ..+... .++..+-. .+.+..+. .... ........
T Consensus 189 ~g~~~V~lv~r~~~-~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 249 (456)
T 1lqt_A 189 RGIQEVVIVGRRGP-LQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNI------------------ 249 (456)
T ss_dssp CCCCEEEEECSSCG-GGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHH------------------
T ss_pred CCCcEEEEEecCCh-hhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHH------------------
Confidence 4 48999999873 222111 11000000 00000000 0000 00000000
Q ss_pred hccCCCceeeCchhhhhhcC------CcEEEecC--ceEEeCC----eEEec----------------CC--cEEeCcEE
Q 016088 274 KAAYGKYPVIDAGTCEKIKS------GQIQVLPG--IESIRGN----EVIFE----------------NG--HSHHFDSI 323 (395)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~------~~i~~~~~--v~~~~~~----~v~~~----------------~g--~~~~~D~v 323 (395)
+.+.+.+.+ .+|+++.+ +.++..+ ++.++ +| +++++|.|
T Consensus 250 -----------~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~v 318 (456)
T 1lqt_A 250 -----------KVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLV 318 (456)
T ss_dssp -----------HHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEE
T ss_pred -----------HHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEE
Confidence 000111122 56777776 6666554 25554 34 46899999
Q ss_pred EEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccccc----CccHHHHHHHHHhhccc
Q 016088 324 VFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGLY----GAAADAQNIADHINSIL 392 (395)
Q Consensus 324 i~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~~----~a~~~a~~~a~~i~~~l 392 (395)
|+|+|++|+. + .. ...+++|.+.+|+....++.|+|||+|||++++. .+..+|..+|.+|.+.+
T Consensus 319 i~a~G~~p~~--l-~g--l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l 386 (456)
T 1lqt_A 319 VRSVGYRGVP--T-PG--LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNL 386 (456)
T ss_dssp EECSCEECCC--C-TT--SCCBTTTTBCCEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHH
T ss_pred EEccccccCC--C-CC--CcccCCCCeeECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 2 22 2356778888884443378999999999986543 58889999999998765
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=1.3e-29 Score=240.62 Aligned_cols=303 Identities=15% Similarity=0.099 Sum_probs=189.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
..+||+|||||++|+++|..|++.+ .+|+|||+.+.++|.|+.... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4689999999999999999999998 899999999988888764311 112233566
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC-CCCCCCCcccc
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP-FTPDIRGLSSF 162 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p-~~~~~~g~~~~ 162 (395)
..++.++++++++.+ +.++.|. .. |++.+ ..+.||+||+||| +.| +.|+++|.+..
T Consensus 62 ~~~~~~~~~~~gv~~--~~~~~v~--------~~--V~~~~---------~~~~~d~lVlAtG--s~~~~~~~ipG~~~~ 118 (460)
T 1cjc_A 62 INTFTQTARSDRCAF--YGNVEVG--------RD--VTVQE---------LQDAYHAVVLSYG--AEDHQALDIPGEELP 118 (460)
T ss_dssp HHHHHHHHTSTTEEE--EBSCCBT--------TT--BCHHH---------HHHHSSEEEECCC--CCEECCCCCTTTTST
T ss_pred HHHHHHHHHhCCcEE--EeeeEEe--------eE--EEecc---------ceEEcCEEEEecC--cCCCCCCCCCCCCCC
Confidence 777888888877665 6666551 11 33322 3468999999999 554 67788887532
Q ss_pred ccCCCCCcceeecccC----------CCCC-CCCCCeEEEEcCCCCHHHHHHHHH--------------------hhcC-
Q 016088 163 CSSATGTGEVIHSTQY----------KNGK-PYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA- 210 (395)
Q Consensus 163 ~~~~~~~~~~~~~~~~----------~~~~-~~~~~~v~ViG~g~~a~e~a~~l~--------------------~~g~- 210 (395)
.+++..++ .... .+.+++++|||+|.+|+|+|..|+ +.+.
T Consensus 119 --------gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~ 190 (460)
T 1cjc_A 119 --------GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVK 190 (460)
T ss_dssp --------TEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCC
T ss_pred --------cEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCc
Confidence 24443332 1111 335899999999999999999999 4566
Q ss_pred eeEEEEecCCcccchhhHHHHHHH--h------------------hcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCc
Q 016088 211 KTSLVIRSPVHVLSREMVYLGLVL--L------------------RYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGP 270 (395)
Q Consensus 211 ~v~~~~r~~~~~~p~~~~~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (395)
+|+++.|++....+....++..+. . .-.+. ...+....+..........++..
T Consensus 191 ~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~------ 263 (460)
T 1cjc_A 191 TVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAA------ 263 (460)
T ss_dssp EEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHH------
T ss_pred EEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhcccccccc------
Confidence 699999988432211111111100 0 00000 00000000000000000000000
Q ss_pred chhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-------eEEec---------------CC--cEEeCcEEE
Q 016088 271 FFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-------EVIFE---------------NG--HSHHFDSIV 324 (395)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-------~v~~~---------------~g--~~~~~D~vi 324 (395)
.......+|+++.+ +.++..+ +|.+. +| +++++|.||
T Consensus 264 -----------------~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi 326 (460)
T 1cjc_A 264 -----------------RRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVL 326 (460)
T ss_dssp -----------------HHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEE
T ss_pred -----------------CCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEE
Confidence 00011256777766 5555432 24443 34 578999999
Q ss_pred EccCCCCCccccccCCCC-ccCCCCCCCCCCCCcccC-CCCeEEEeccccccc----CccHHHHHHHHHhhccc
Q 016088 325 FCTGFKRSTNVWLKGDDS-MLNDDGIPKQSYPNHWKG-KNGLYCVGLSRKGLY----GAAADAQNIADHINSIL 392 (395)
Q Consensus 325 ~atG~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~-~~~vya~Gd~~~~~~----~a~~~a~~~a~~i~~~l 392 (395)
+|+|++|+. + .+. ..+++|.+++| +.++++ .|+|||+|||++++. .+..+|..+|.+|.+.+
T Consensus 327 ~a~G~~p~~--l---~gl~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l 394 (460)
T 1cjc_A 327 SSIGYKSRP--I---DPSVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDL 394 (460)
T ss_dssp ECCCEECCC--C---CTTSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCC--C---CCCcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999987 2 222 35677888888 566777 799999999987543 68899999999998765
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=6.4e-30 Score=255.00 Aligned_cols=268 Identities=16% Similarity=0.173 Sum_probs=196.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+||+|||||++|+++|..|+++|++|+|||+.+.+||.|.... ..+.+....++.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 468999999999999999999999999999999999998766310 0112234467788
Q ss_pred HHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC------CCCCCCCC
Q 016088 86 YLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRG 158 (395)
Q Consensus 86 ~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~------p~~~~~~g 158 (395)
++...+.++ ++++ +.++.|+ ..+. ..+.+|+||+|||...+ |..|+++|
T Consensus 448 ~~~~~~~~~~gv~~--~~~~~v~--------------~~~~--------~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVEI--YRESPMT--------------GDDI--------VEFGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEEE--ESSCCCC--------------HHHH--------HHTTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCEE--EECCeec--------------HHHH--------hhcCCCEEEEcCCCccccccccccCCCCCCC
Confidence 888888776 6654 5554431 1111 45789999999994322 55677777
Q ss_pred ccccccCCCCCcceeecccCCCCCCCCCCeEEEEc--CCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhh
Q 016088 159 LSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLR 236 (395)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~ 236 (395)
.+.. .+++..++.......+++++||| +|.+|+|+|..|++.|.+|+++.+.+ .+++....
T Consensus 504 ~~~~--------~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~-------- 566 (690)
T 3k30_A 504 AEGM--------QVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNN-------- 566 (690)
T ss_dssp CTTS--------EEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGG--------
T ss_pred CCCC--------cEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-cccccccc--------
Confidence 6642 46666666555555688999999 99999999999999999999999887 33322110
Q ss_pred cCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEec-
Q 016088 237 YVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE- 313 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~- 313 (395)
+.....+.+.+++.+|+++.+ |++++.+++.+.
T Consensus 567 --------------------------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~ 602 (690)
T 3k30_A 567 --------------------------------------------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRD 602 (690)
T ss_dssp --------------------------------------------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEE
T ss_pred --------------------------------------------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEE
Confidence 001112345567789999998 999998876654
Q ss_pred ----CCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc--ccCccHHHHHHHHH
Q 016088 314 ----NGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIADH 387 (395)
Q Consensus 314 ----~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~--~~~a~~~a~~~a~~ 387 (395)
+++++++|.||+|+|++|+.. +..... . .+. .++.|+||++|||++. +..|..||..+|.+
T Consensus 603 ~~~~~~~~i~aD~VV~A~G~~p~~~-l~~~l~-~---~~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~ 669 (690)
T 3k30_A 603 TYASIERELECDAVVMVTARLPREE-LYLDLV-A---RRD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEE 669 (690)
T ss_dssp TTTCCEEEEECSEEEEESCEEECCH-HHHHHH-H---HHH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEECCEEEECCCCCCChH-HHHHHh-h---hhc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHH
Confidence 456789999999999999984 443321 1 111 6788999999999864 34799999999999
Q ss_pred hhcccC
Q 016088 388 INSILS 393 (395)
Q Consensus 388 i~~~l~ 393 (395)
|.+.|.
T Consensus 670 i~~~l~ 675 (690)
T 3k30_A 670 FDAVLP 675 (690)
T ss_dssp TTCCCC
T ss_pred HHhhcc
Confidence 999864
No 85
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.96 E-value=4.1e-30 Score=246.73 Aligned_cols=303 Identities=12% Similarity=0.154 Sum_probs=187.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeec--ccc--ccccCCCCCCCC------C
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLH--LAK--QFCQLPHLPFPS------S 73 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~--~~~--~~~~~~~~~~~~------~ 73 (395)
..+||+|||||++|+++|..|.++ +.+|+|||+++.++. .........+. .+. ....+...+... .
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 468999999999999999999887 789999999876541 10000000000 000 000000000000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 74 YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
...+....++.+ ..+.++++ +.+++|++++... +.|.+.++ ..+.||+||+||| ++|+.
T Consensus 88 ~~~~~~~~~l~~-----~~~~gv~~--~~g~~v~~id~~~----~~V~~~~g--------~~i~yd~lviATG--s~p~~ 146 (493)
T 1m6i_A 88 PSFYVSAQDLPH-----IENGGVAV--LTGKKVVQLDVRD----NMVKLNDG--------SQITYEKCLIATG--GTPRS 146 (493)
T ss_dssp GGGSBCTTTTTT-----STTCEEEE--EETCCEEEEEGGG----TEEEETTS--------CEEEEEEEEECCC--EEECC
T ss_pred hHhhcchhhhhh-----hhcCCeEE--EcCCEEEEEECCC----CEEEECCC--------CEEECCEEEECCC--CCCCC
Confidence 000011011100 12334444 8888999998654 24777654 6789999999999 77877
Q ss_pred CCCCCcc--ccccCCCCCcceeecccCCC---C--CCCCCCeEEEEcCCCCHHHHHHHHHh----hcCeeEEEEecCCcc
Q 016088 154 PDIRGLS--SFCSSATGTGEVIHSTQYKN---G--KPYGGKNVLVVGSGNSGMEIALDLAN----HAAKTSLVIRSPVHV 222 (395)
Q Consensus 154 ~~~~g~~--~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~v~ViG~g~~a~e~a~~l~~----~g~~v~~~~r~~~~~ 222 (395)
|++++.. .+ ...+.......+ . ....+++++|||+|.+|+|+|..|++ .|.+|+++.+.+. .
T Consensus 147 ~~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~-~ 219 (493)
T 1m6i_A 147 LSAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG-N 219 (493)
T ss_dssp CHHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS-T
T ss_pred CCCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc-c
Confidence 6654321 11 111222111111 0 01137899999999999999999987 4677999987652 1
Q ss_pred cchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-
Q 016088 223 LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG- 301 (395)
Q Consensus 223 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 301 (395)
+++ .++. .+...+.+.+++.+|+++.+
T Consensus 220 ~~~-----------~l~~-----------------------------------------~~~~~~~~~l~~~GV~v~~~~ 247 (493)
T 1m6i_A 220 MGK-----------ILPE-----------------------------------------YLSNWTMEKVRREGVKVMPNA 247 (493)
T ss_dssp TTT-----------TSCH-----------------------------------------HHHHHHHHHHHTTTCEEECSC
T ss_pred ccc-----------cCCH-----------------------------------------HHHHHHHHHHHhcCCEEEeCC
Confidence 111 1111 11111245567788999988
Q ss_pred -ceEEeCC----eEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCC-CCCCCCCCCCcccCCCCeEEEecccccc-
Q 016088 302 -IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLND-DGIPKQSYPNHWKGKNGLYCVGLSRKGL- 374 (395)
Q Consensus 302 -v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~vya~Gd~~~~~- 374 (395)
|++++.+ .+.+++|+++++|.||+|+|+.||.. +++..+...++ +|.+.+| +.+++ .|+|||+|||+..+
T Consensus 248 ~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~-l~~~~gl~~~~~~ggi~Vd-~~l~t-~~~IyA~GD~a~~~~ 324 (493)
T 1m6i_A 248 IVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVE-LAKTGGLEIDSDFGGFRVN-AELQA-RSNIWVAGDAACFYD 324 (493)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCT-THHHHTCCBCTTTCSEECC-TTCEE-ETTEEECGGGEEEEE
T ss_pred EEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHH-HHHHcCCccccCCCcEEEC-CCccc-CCCeeEeeeeEeccC
Confidence 7887532 37788999999999999999999984 55443233343 5788888 45556 59999999997631
Q ss_pred -----------cCccHHHHHHHHHhhcccC
Q 016088 375 -----------YGAAADAQNIADHINSILS 393 (395)
Q Consensus 375 -----------~~a~~~a~~~a~~i~~~l~ 393 (395)
..|..||+.+|.+|.+...
T Consensus 325 ~~~g~~~~~~~~~A~~qg~~aa~ni~g~~~ 354 (493)
T 1m6i_A 325 IKLGRRRVEHHDHAVVSGRLAGENMTGAAK 354 (493)
T ss_dssp TTTEEECCCCHHHHHHHHHHHHHHHTSCCC
T ss_pred cccCccccchHHHHHHHHHHHHHHhcCCCC
Confidence 1689999999999987653
No 86
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=4.2e-29 Score=258.22 Aligned_cols=277 Identities=16% Similarity=0.181 Sum_probs=184.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
.+||+|||||++|+++|..|+++|+ +|+|||+.+.+||.+... ++. +....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCc---------ccCCHHHHH
Confidence 5799999999999999999999999 799999999888875421 111 111235666
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCC-CCcccccc
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDI-RGLSSFCS 164 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~-~g~~~~~~ 164 (395)
+..+.++++++++ +.++.+.. .. +++.++ ..+.||+||+|||. ..|+.+++ +|.+..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~-------~~--v~~~~~--------~~~~~d~vvlAtGa-~~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE-------NE--ITLNTL--------KEEGYKAAFIGIGL-PEPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST-------TS--BCHHHH--------HHTTCCEEEECCCC-CEECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc-------ce--EEhhhc--------CccCCCEEEEecCC-CCCCCCCCCCCCCCC--
Confidence 6667777888776 77766621 11 333332 34679999999994 14665543 344322
Q ss_pred CCCCCcceeecccCC--------------CC-CCCCCCeEEEEcCCCCHHHHHHHHHhhcC-eeEEEEecCCcccchhhH
Q 016088 165 SATGTGEVIHSTQYK--------------NG-KPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSPVHVLSREMV 228 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~--------------~~-~~~~~~~v~ViG~g~~a~e~a~~l~~~g~-~v~~~~r~~~~~~p~~~~ 228 (395)
. .+++..++. +. ....+++++|||+|.+|+|+|..+.+.|. +||++.|++...+|....
T Consensus 301 ----~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~ 375 (1025)
T 1gte_A 301 ----Q-GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE 375 (1025)
T ss_dssp ----T-TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH
T ss_pred ----C-CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH
Confidence 1 233322211 11 12236799999999999999999999996 899999987434443322
Q ss_pred HHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEe
Q 016088 229 YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIR 306 (395)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~ 306 (395)
.+ +.+++.+++++.+ +.++.
T Consensus 376 e~----------------------------------------------------------~~~~~~Gv~~~~~~~~~~i~ 397 (1025)
T 1gte_A 376 EV----------------------------------------------------------ELAKEEKCEFLPFLSPRKVI 397 (1025)
T ss_dssp HH----------------------------------------------------------HHHHHTTCEEECSEEEEEEE
T ss_pred HH----------------------------------------------------------HHHHHcCCEEEeCCCceEEE
Confidence 11 1112233444333 22222
Q ss_pred C--Ce---EEec-------------CC--cEEeCcEEEEccCCCCCccccccCC-CCccCCCCCCCCCCCCcccCCCCeE
Q 016088 307 G--NE---VIFE-------------NG--HSHHFDSIVFCTGFKRSTNVWLKGD-DSMLNDDGIPKQSYPNHWKGKNGLY 365 (395)
Q Consensus 307 ~--~~---v~~~-------------~g--~~~~~D~vi~atG~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~vy 365 (395)
. +. +.+. +| .++++|.||+|+|++|+...+..+. +...+++|++.+|+.+++|+.|+||
T Consensus 398 ~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~~~~G~I~vd~~~~~Ts~~~Vf 477 (1025)
T 1gte_A 398 VKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKFNRWDLPEVDPETMQTSEPWVF 477 (1025)
T ss_dssp EETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCBCTTSSBCCCTTTCBCSSTTEE
T ss_pred ccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceECCCCCEEECCCCCccCCCCEE
Confidence 1 11 2221 12 3689999999999987644565543 3345778999999657889999999
Q ss_pred EEeccccccc---CccHHHHHHHHHhhccc
Q 016088 366 CVGLSRKGLY---GAAADAQNIADHINSIL 392 (395)
Q Consensus 366 a~Gd~~~~~~---~a~~~a~~~a~~i~~~l 392 (395)
|+||+++++. .|..+|+.+|++|.++|
T Consensus 478 A~GD~~~~~~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 478 AGGDIVGMANTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp ECSGGGCSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999988643 89999999999998754
No 87
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.95 E-value=9e-29 Score=247.65 Aligned_cols=277 Identities=18% Similarity=0.210 Sum_probs=188.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+||+|||||++|+++|..|+++|++|+|||+.+.+||.|..... + +.+.....+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~-------------~---------pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA-------------L---------PGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT-------------S---------TTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc-------------C---------CChHHHHHHHH
Confidence 3589999999999999999999999999999999999987764210 0 11112234555
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC------CCCCCCCCc
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN------PFTPDIRGL 159 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~------p~~~~~~g~ 159 (395)
++...++.+. ..+..++.+... . .+.+.++ ..+.||+||+|||...+ |..|+++|.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~~---~--~v~~~~~--------~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALGQ---K--PMTADDV--------LQYGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECSC---C--CCCHHHH--------HTSCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEeC---e--EEehhhc--------cccCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 5555444330 000111112110 1 1333332 45789999999995321 567788888
Q ss_pred cccccCCCCCcceeecccCCCCCCCCCCeEEEEc--CCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhc
Q 016088 160 SSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRY 237 (395)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~ 237 (395)
+.+ ...+++..++.......+++++||| +|.+|+|+|..|++.|.+|+++.+++ +++......
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~~------- 572 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFTL------- 572 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHTT-------
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccccccccc-------
Confidence 754 3356665555554445588999999 99999999999999999999999887 333211100
Q ss_pred CChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEec--
Q 016088 238 VPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIFE-- 313 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~~-- 313 (395)
....+.+.+++.+|+++.+ +.+++.+++.+.
T Consensus 573 ---------------------------------------------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~ 607 (729)
T 1o94_A 573 ---------------------------------------------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNI 607 (729)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEET
T ss_pred ---------------------------------------------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEe
Confidence 0011234466678999988 888888776543
Q ss_pred --CC-cE------------------EeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEecccc
Q 016088 314 --NG-HS------------------HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRK 372 (395)
Q Consensus 314 --~g-~~------------------~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~ 372 (395)
++ +. +++|.||+|+|++|+.. +..... . .+| ..++|+.|+|||+|||+.
T Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~-l~~~l~-~-------~vd-~~~~t~~~~VyAiGD~~~ 677 (729)
T 1o94_A 608 WGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECT-LWNELK-A-------RES-EWAENDIKGIYLIGDAEA 677 (729)
T ss_dssp TCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCH-HHHHHH-H-------TGG-GTGGGTCCEEEECGGGTS
T ss_pred cCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChH-HHHHHh-h-------hcc-cccccCCCCeEEEeCccc
Confidence 33 22 89999999999999984 444321 1 234 467788999999999976
Q ss_pred c--ccCccHHHHHHHHHhhccc
Q 016088 373 G--LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 373 ~--~~~a~~~a~~~a~~i~~~l 392 (395)
. +..|..+|..+|.+|.+.+
T Consensus 678 ~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 678 PRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp CCCHHHHHHHHHHHHHTTTSSC
T ss_pred hhhHHHHHHHHHHHHHHhhhhc
Confidence 3 3479999999999998876
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=7.5e-28 Score=247.25 Aligned_cols=281 Identities=15% Similarity=0.164 Sum_probs=192.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.. . +...+ .. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i------------------~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI------------------DG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE------------------TT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc------------------CC-CCHHHHHHH
Confidence 479999999999999999999999999999999999988772 1 10000 00 123455555
Q ss_pred HHHHHHhc-CCcceeeeeeeEEEeEEeCC-------CCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCC
Q 016088 87 LDHYVSHF-NIVPSIRYQRSVESASYDEA-------TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRG 158 (395)
Q Consensus 87 l~~~~~~~-~~~~~i~~~~~V~~i~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g 158 (395)
+.+.+.++ ++++ +.+++|+++..... .+.+.+...+....+.. ..++||+||+||| +.|+.|+++|
T Consensus 187 ~~~~l~~~~~v~~--~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~--~~i~~d~lVlATG--s~p~~~~ipG 260 (965)
T 2gag_A 187 VTSELAEAEETTH--LQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERI--WHIRAKQVVLATG--AHERPIVFEN 260 (965)
T ss_dssp HHHHHHHSTTEEE--ESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEE--EEEEEEEEEECCC--EEECCCCCBT
T ss_pred HHHHHhhcCCcEE--EeCCEEEeeecCCceeeeEeecccccccccccCCCCce--EEEECCEEEECCC--CccCCCCCCC
Confidence 54445554 6555 88888988763210 01111111000000011 4789999999999 7788888888
Q ss_pred ccccccCCCCCcceeeccc---CCC-CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHH
Q 016088 159 LSSFCSSATGTGEVIHSTQ---YKN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVL 234 (395)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~ 234 (395)
.+.. .+++... +.. .....+++++|||+|.+|+|+|..|++.|.+|+++.+++. +++.
T Consensus 261 ~~~~--------gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~-~~~~--------- 322 (965)
T 2gag_A 261 NDRP--------GIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARSS-ISAA--------- 322 (965)
T ss_dssp CCST--------TEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS-CCHH---------
T ss_pred CCCC--------CEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc-cchh---------
Confidence 7643 2444321 111 1233468999999999999999999999999999999872 2110
Q ss_pred hhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeC--C--
Q 016088 235 LRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRG--N-- 308 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~--~-- 308 (395)
.+.+++.+|+++.+ +.+++. +
T Consensus 323 -----------------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~ 349 (965)
T 2gag_A 323 -----------------------------------------------------AAQAVADGVQVISGSVVVDTEADENGE 349 (965)
T ss_dssp -----------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSC
T ss_pred -----------------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCC
Confidence 12345567888887 777765 2
Q ss_pred --eEEecC-------C--cEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCc----ccCCCCeEEEeccccc
Q 016088 309 --EVIFEN-------G--HSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNH----WKGKNGLYCVGLSRKG 373 (395)
Q Consensus 309 --~v~~~~-------g--~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~vya~Gd~~~~ 373 (395)
+|.+.+ | +++++|.|++|+|++||.. +.... .|.+.+|+... .++.|+|||+|||++.
T Consensus 350 v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~-l~~~~------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~ 422 (965)
T 2gag_A 350 LSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVH-LHSQR------QGKLDWDTTIHAFVPADAVANQHLAGAMTGR 422 (965)
T ss_dssp EEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCH-HHHHT------TCCEEEETTTTEEEECSCCTTEEECGGGGTC
T ss_pred EEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChH-HHHhC------CCcEEEcCcccccccCCCCCCEEEEEecCCc
Confidence 467764 5 6789999999999999984 43322 35666663322 2789999999999865
Q ss_pred --ccCccHHHHHHHHHhhccc
Q 016088 374 --LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 374 --~~~a~~~a~~~a~~i~~~l 392 (395)
...|..||+.+|.+|.+.+
T Consensus 423 ~~l~~A~~~G~~aA~~i~~~l 443 (965)
T 2gag_A 423 LDTASALSTGAATGAAAATAA 443 (965)
T ss_dssp CSHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHc
Confidence 3388999999999998766
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.95 E-value=8.4e-29 Score=234.26 Aligned_cols=284 Identities=16% Similarity=0.151 Sum_probs=183.1
Q ss_pred CeEEEECCChHHHHHHHHHhh--cCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~--~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
+||+|||||++|+++|..|++ .+.+|+|||+++.++..... +... .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~----------~~~~------------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF----------PHLA------------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH----------HHHH------------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc----------chhc------------cCccCHHHHHH
Confidence 589999999999999999999 78999999998855421100 0000 00001111222
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.+.+.+++.+++. + ..+|+.++.+. . .|.+.++ ..+.||+||+||| +.|..|. ....
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~--~--~v~~~~g--------~~i~~d~liiAtG--~~~~~pg---~~~~--- 117 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA--N--TVTTQSG--------KKIEYDYLVIATG--PKLVFGA---EGQE--- 117 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT--T--EEEETTC--------CEEECSEEEECCC--CEEECCS---BTHH---
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC--C--EEEECCC--------cEEECCEEEEcCC--cccccCC---CCCc---
Confidence 2233445567664 4 46888887644 3 3666554 6789999999999 6776653 2210
Q ss_pred CCCCcceeecccCCCCCC--------CCCCeEEEEcCCCCH------HHHHHHHH----hhc----CeeEEEEecCCccc
Q 016088 166 ATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNSG------MEIALDLA----NHA----AKTSLVIRSPVHVL 223 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~--------~~~~~v~ViG~g~~a------~e~a~~l~----~~g----~~v~~~~r~~~~~~ 223 (395)
+...+.....+... ..+++++|||+|.+| +|+|..++ +.| .+|+++.+.+ ...
T Consensus 118 ----g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~ 192 (430)
T 3h28_A 118 ----ENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLG 192 (430)
T ss_dssp ----HHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STT
T ss_pred ----CCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-ccc
Confidence 01111111111000 013456889987654 88885554 445 3688888776 211
Q ss_pred chhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--
Q 016088 224 SREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-- 301 (395)
Q Consensus 224 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 301 (395)
+.... ..+.....+.+.+++.+|+++.+
T Consensus 193 ~~~l~--------------------------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~ 222 (430)
T 3h28_A 193 HFGVG--------------------------------------------------GIGASKRLVEDLFAERNIDWIANVA 222 (430)
T ss_dssp CTTTT--------------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCE
T ss_pred ccccC--------------------------------------------------cchHHHHHHHHHHHHCCCEEEeCCE
Confidence 00000 00111222356677789999998
Q ss_pred ceEEeCCeEEecC----CcEEeCcEEEEccCCCCCccccccCCCCccCCCC-CCCCCCCCccc-CCCCeEEEecccccc-
Q 016088 302 IESIRGNEVIFEN----GHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDG-IPKQSYPNHWK-GKNGLYCVGLSRKGL- 374 (395)
Q Consensus 302 v~~~~~~~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~-~~~~vya~Gd~~~~~- 374 (395)
|++++.+++.+++ |+++++|.|++++|+.++. .+.....++.+++| ++.||+ .+++ +.|||||+|||+..+
T Consensus 223 v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~-~l~~~~~gl~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~ 300 (430)
T 3h28_A 223 VKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPP 300 (430)
T ss_dssp EEEECSSEEEEECTTSCEEEEECSEEEEECEEECCH-HHHTTCTTTBCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCC
T ss_pred EEEEeCCeEEEEecCCCceEEeeeEEEECCCCccch-hHhhccccCcCCCCCEEecCc-cccCCCCCCEEEEEeeeccCC
Confidence 9999999999887 7889999999999999875 23322024578889 999995 5554 899999999997632
Q ss_pred --------------cCccHHHHHHHHHhhcccC
Q 016088 375 --------------YGAAADAQNIADHINSILS 393 (395)
Q Consensus 375 --------------~~a~~~a~~~a~~i~~~l~ 393 (395)
..|..||..+|++|.+.|.
T Consensus 301 ~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~ 333 (430)
T 3h28_A 301 IEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp SSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 2799999999999998873
No 90
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=1.5e-27 Score=223.99 Aligned_cols=284 Identities=18% Similarity=0.177 Sum_probs=180.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.++|+|||||++|+++|..|++.+ .+|+|||+++...... +...... ...+.+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p-------~~~~v~~---------------g~~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY-------MSNEVIG---------------GDRELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST-------THHHHHH---------------TSSCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc-------CHHHHhc---------------CCCCHHHHh
Confidence 368999999999999999998876 4899999887421100 0000000 000011111
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
..+.+ +...+++ ....+|++++.+. .. +.+.++ .++.||+||+||| ++++++.++|.++.
T Consensus 60 ~~~~~-~~~~gv~---~i~~~v~~id~~~--~~--v~~~~g--------~~i~yd~LviAtG--~~~~~~~i~G~~e~-- 119 (401)
T 3vrd_B 60 VGYDG-LRAHGIQ---VVHDSALGIDPDK--KL--VKTAGG--------AEFAYDRCVVAPG--IDLLYDKIEGYSEA-- 119 (401)
T ss_dssp ECSHH-HHHTTCE---EECSCEEEEETTT--TE--EEETTS--------CEEECSEEEECCC--EEECGGGSBTCCSG--
T ss_pred hCHHH-HHHCCCE---EEEeEEEEEEccC--cE--EEeccc--------ceeecceeeeccC--CccccCCccCchhh--
Confidence 11122 2334666 4567899998754 33 666665 7899999999999 78888888887754
Q ss_pred CCCCCcc-eeecccCCC--------CCCCCCCeEEEEcCCC-------C----HHHHHHHHHhhc--CeeEEEEecCCcc
Q 016088 165 SATGTGE-VIHSTQYKN--------GKPYGGKNVLVVGSGN-------S----GMEIALDLANHA--AKTSLVIRSPVHV 222 (395)
Q Consensus 165 ~~~~~~~-~~~~~~~~~--------~~~~~~~~v~ViG~g~-------~----a~e~a~~l~~~g--~~v~~~~r~~~~~ 222 (395)
.+. ..++..... .........+|+++|. . +++++..+.+.+ .+|+++.+.+...
T Consensus 120 ----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~~~~ 195 (401)
T 3vrd_B 120 ----LAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQTFS 195 (401)
T ss_dssp ----GGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSSSCT
T ss_pred ----cccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEccccccc
Confidence 111 111111100 0112233344444332 2 345555555554 5788888776321
Q ss_pred -cchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC
Q 016088 223 -LSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG 301 (395)
Q Consensus 223 -~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 301 (395)
+|.....+.. .+...+++.+++++.+
T Consensus 196 ~~~~~~~~~~~-----------------------------------------------------~~~~~l~~~gi~v~~~ 222 (401)
T 3vrd_B 196 KQAQFTKGWER-----------------------------------------------------LYGFGTENALIEWHPG 222 (401)
T ss_dssp THHHHHHHHHH-----------------------------------------------------HSCTTSTTCSEEEECT
T ss_pred ccccccHHHHH-----------------------------------------------------HHHHHHHhcCcEEEeC
Confidence 1111111111 1134466788999887
Q ss_pred --ceEEeCC----eEEecCCcEEeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCc-ccCCCCeEEEecccccc
Q 016088 302 --IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNH-WKGKNGLYCVGLSRKGL 374 (395)
Q Consensus 302 --v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~vya~Gd~~~~~ 374 (395)
+..++.+ .+.+++|+++++|.+++++|.+|+. ++... ++.+++|++.||+..+ .++.|||||+|||+.+.
T Consensus 223 ~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~--~~~~~-gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~ 299 (401)
T 3vrd_B 223 PDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGK--IAQSA-SLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAA 299 (401)
T ss_dssp TTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECH--HHHHT-TCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCT
T ss_pred ceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCch--hHhhc-cccccCCCEEECCCcceecCCCCEEEecccccCC
Confidence 6655532 4888999999999999999999874 45544 4678899999996644 58899999999997642
Q ss_pred ------cCccHHHHHHHHHhhccc
Q 016088 375 ------YGAAADAQNIADHINSIL 392 (395)
Q Consensus 375 ------~~a~~~a~~~a~~i~~~l 392 (395)
..|..||..+|+||.+.|
T Consensus 300 ~~pk~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 300 PMPKSAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp TSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHh
Confidence 278999999999998876
No 91
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.94 E-value=3.5e-27 Score=234.74 Aligned_cols=288 Identities=18% Similarity=0.187 Sum_probs=180.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+||+|||||++|+++|..|+++|++|+|||+++.+||.|.... .+ +......++.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHHH
Confidence 358999999999999999999999999999999998888765310 00 11122345666
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEE-EeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYY-SGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
++...++++++++ +.++.|+. ..+ .||+||+||| +.|+.|+++|.+..
T Consensus 430 ~~~~~~~~~gv~~--~~~~~v~~-------------------------~~~~~~d~lviAtG--~~p~~~~i~G~~~~-- 478 (671)
T 1ps9_A 430 YYRRMIEVTGVTL--KLNHTVTA-------------------------DQLQAFDETILASG--IVPRTPPIDGIDHP-- 478 (671)
T ss_dssp HHHHHHHHHTCEE--EESCCCCS-------------------------SSSCCSSEEEECCC--EEECCCCCBTTTST--
T ss_pred HHHHHHHHcCCEE--EeCcEecH-------------------------HHhhcCCEEEEccC--CCcCCCCCCCCCCC--
Confidence 7777777778765 66665421 112 7899999999 78999988887643
Q ss_pred CCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC--CcccchhhHHHHHHHhhcCChhh
Q 016088 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP--VHVLSREMVYLGLVLLRYVPCGG 242 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~--~~~~p~~~~~~~~~~~~~~~~~~ 242 (395)
.+++..++.......+++++|||+|.+|+|+|..|++.|.+|++....- .|-.......... +....+..
T Consensus 479 ------~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~-~~~~~~~~- 550 (671)
T 1ps9_A 479 ------KVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGG-LSPQGMQI- 550 (671)
T ss_dssp ------TEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGG-BCTTCCCC-
T ss_pred ------cEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccc-cccccccc-
Confidence 4555555555444568999999999999999999999887766421000 0000000000000 00000000
Q ss_pred HHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCCeEEe-cCC--cE
Q 016088 243 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGNEVIF-ENG--HS 317 (395)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~~v~~-~~g--~~ 317 (395)
........+....... .. ....+.....+.+.+++.+|+++.+ +++++.+++.+ .+| ++
T Consensus 551 ------------~~~~~~v~l~~~~~~~-l~---~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~ 614 (671)
T 1ps9_A 551 ------------PRSPRQIVMLQRKASK-PG---QGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQV 614 (671)
T ss_dssp ------------CCCSSEEEEECSSCSC-TT---TTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEE
T ss_pred ------------CCCCcEEEEEEecchh-hc---cccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEE
Confidence 0000000000000000 00 0000111122345677789999998 88999888887 688 57
Q ss_pred EeCcEEEEccCCCCCccccccCCCCccCCCCCCCCCCCCcccCCCCeEEEeccccc----ccCccHHHHHHHHHh
Q 016088 318 HHFDSIVFCTGFKRSTNVWLKGDDSMLNDDGIPKQSYPNHWKGKNGLYCVGLSRKG----LYGAAADAQNIADHI 388 (395)
Q Consensus 318 ~~~D~vi~atG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~----~~~a~~~a~~~a~~i 388 (395)
+++|.||+|+|++||. .+...+ . ...++||++|||+.. ...|..||..+|.+|
T Consensus 615 i~~D~Vi~a~G~~p~~-~l~~~l----~-------------~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 615 LAVDNVVICAGQEPNR-ALAQPL----I-------------DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp ECCSEEEECCCEEECC-TTHHHH----H-------------TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred EeCCEEEECCCccccH-HHHHHH----H-------------hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 8999999999999997 344322 0 112689999999653 347899999999876
No 92
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.94 E-value=3.5e-28 Score=229.76 Aligned_cols=291 Identities=17% Similarity=0.192 Sum_probs=172.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
++|+|||||++|+++|..|++.+ .+|+|||+++.+. |..+...... ...+.+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~---------------g~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM---------------GWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH---------------TCSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc---------------CCCCHHHhhh
Confidence 47999999999999999999865 6899999987321 1000000000 0001111111
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSS 165 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~ 165 (395)
.+++++++.+++ ....+|++|+.+. .. |++.++ .++.||+||+||| +++. ++++|.++...+
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~--~~--V~~~~g--------~~i~YD~LViAtG--~~~~-~~i~G~~e~~~~ 122 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA--NT--VTTQSG--------KKIEYDYLVIATG--PKLV-FGAEGQEENSTS 122 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT--TE--EEETTC--------CEEECSEEEECCC--CEEE-CCSBTHHHHSCC
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC--CE--EEECCC--------CEEECCEEEEeCC--CCcc-CCccCcccCcCC
Confidence 122334455666 4566899998755 33 777765 7899999999999 5554 457777654111
Q ss_pred CCCCcceeecccCCCCCC-CCCCeEEEEcCCC------CHHHHHHHHH----hhc----CeeEEEEecCCcccchhhHHH
Q 016088 166 ATGTGEVIHSTQYKNGKP-YGGKNVLVVGSGN------SGMEIALDLA----NHA----AKTSLVIRSPVHVLSREMVYL 230 (395)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-~~~~~v~ViG~g~------~a~e~a~~l~----~~g----~~v~~~~r~~~~~~p~~~~~~ 230 (395)
+..........+ .... ...+.++|+|++. .+.|++..+. +.+ .+|+++...+ ...+....
T Consensus 123 ~~~~~~a~~~~~--~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l~~~~~~-- 197 (430)
T 3hyw_A 123 ICTAEHALETQK--KLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVG-- 197 (430)
T ss_dssp CSSHHHHHHHHH--HHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTT--
T ss_pred cccHHHHHHHHH--HHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hhhhccch--
Confidence 110000000000 0000 1134455665543 1234443333 233 3466665554 11100000
Q ss_pred HHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC
Q 016088 231 GLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN 308 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~ 308 (395)
..+.....+.+.+++.+|+++.+ |++++.+
T Consensus 198 ------------------------------------------------~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~ 229 (430)
T 3hyw_A 198 ------------------------------------------------GIGASKRLVEDLFAERNIDWIANVAVKAIEPD 229 (430)
T ss_dssp ------------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCEEEEECSS
T ss_pred ------------------------------------------------hhHHHHHHHHHHHHhCCeEEEeCceEEEEeCC
Confidence 00111112345577789999999 9999999
Q ss_pred eEEecC----CcEEeCcEEEEccCCCCCccccccCCCCcc-CCCCCCCCCCCCcccCCCCeEEEecccccc---------
Q 016088 309 EVIFEN----GHSHHFDSIVFCTGFKRSTNVWLKGDDSML-NDDGIPKQSYPNHWKGKNGLYCVGLSRKGL--------- 374 (395)
Q Consensus 309 ~v~~~~----g~~~~~D~vi~atG~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~--------- 374 (395)
.+.+++ ++++++|.+++++|.+|+. .+......+. +.+|++.+|...+.++.|||||+|||+..+
T Consensus 230 ~~~~~~~~g~~~~i~~d~vi~~~G~~~~~-~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~ 308 (430)
T 3hyw_A 230 KVIYEDLNGNTHEVPAKFTMFMPSFQGPE-VVASAGDKVANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPT 308 (430)
T ss_dssp EEEEECTTSCEEEEECSEEEEECEEECCH-HHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCC
T ss_pred ceEEEeeCCCceEeecceEEEeccCCCch-HHHhcccccccCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcC
Confidence 888865 3578999999999999975 3333221233 456778888444448999999999997532
Q ss_pred ------cCccHHHHHHHHHhhccc
Q 016088 375 ------YGAAADAQNIADHINSIL 392 (395)
Q Consensus 375 ------~~a~~~a~~~a~~i~~~l 392 (395)
..|.+||..+|+||.+.+
T Consensus 309 ~~pk~a~~A~~qg~~~A~Ni~~~l 332 (430)
T 3hyw_A 309 GVPKTGMMIEQMAMAVAHNIVNDI 332 (430)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHh
Confidence 168899999999999876
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=2.3e-26 Score=220.75 Aligned_cols=256 Identities=17% Similarity=0.156 Sum_probs=172.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
++||+|||||++|+++|..|+++ .+|+|||+++.+||.|....+. .+. ++. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---------~~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---------FNK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---------TTE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---------CCC--CHHHHHHH
Confidence 46899999999999999999999 9999999999998876642110 000 011 23344444
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCccccccCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCSSA 166 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~~~ 166 (395)
+.+.+ ..+++. ++++.|++++.+. ..+.+...+. ++. ..+.||+||+||| +.|+.|+++|.+..
T Consensus 167 l~~~l-~~~v~~--~~~~~v~~i~~~~--~~~~~~~~~~---~~~--~~~~~d~lvlAtG--a~~~~~~~~g~~~~---- 230 (493)
T 1y56_A 167 LVGKL-NENTKI--YLETSALGVFDKG--EYFLVPVVRG---DKL--IEILAKRVVLATG--AIDSTMLFENNDMP---- 230 (493)
T ss_dssp HHHTC-CTTEEE--ETTEEECCCEECS--SSEEEEEEET---TEE--EEEEESCEEECCC--EEECCCCCTTTTST----
T ss_pred HHHHH-hcCCEE--EcCCEEEEEEcCC--cEEEEEEecC---CeE--EEEECCEEEECCC--CCccCCCCCCCCCC----
Confidence 33322 335444 8899999998755 5555554332 111 4799999999999 78888888887642
Q ss_pred CCCcceeecccCC---C-CCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhh
Q 016088 167 TGTGEVIHSTQYK---N-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGG 242 (395)
Q Consensus 167 ~~~~~~~~~~~~~---~-~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~ 242 (395)
.++...... . .....+++++|+|+|.+|+| ..+.+.|. .++....
T Consensus 231 ----gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV--~v~~~~~----------------------- 279 (493)
T 1y56_A 231 ----GVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWGI--DYVHIPN----------------------- 279 (493)
T ss_dssp ----TEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTC--EEEECSS-----------------------
T ss_pred ----CEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCc--EEEeCCe-----------------------
Confidence 233322211 1 12234689999999999998 22333332 2222111
Q ss_pred HHHHHHHHHHHHhcchhhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecCceEEeCC----eEEecCCcEE
Q 016088 243 VDTLMVMLSRLVYGDLSKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGN----EVIFENGHSH 318 (395)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~----~v~~~~g~~~ 318 (395)
+.+++.+ .+.+++|+++
T Consensus 280 -----------------------------------------------------------v~~i~~~~~v~~v~~~~g~~i 300 (493)
T 1y56_A 280 -----------------------------------------------------------VKRVEGNEKVERVIDMNNHEY 300 (493)
T ss_dssp -----------------------------------------------------------EEEEECSSSCCEEEETTCCEE
T ss_pred -----------------------------------------------------------eEEEecCCceEEEEeCCCeEE
Confidence 2333222 3667888999
Q ss_pred eCcEEEEccCCCCCccccccCCCCc--cCCCCCCC-CCCCCcccCCCCeEEEeccccc--ccCccHHHHHHHHHhhccc
Q 016088 319 HFDSIVFCTGFKRSTNVWLKGDDSM--LNDDGIPK-QSYPNHWKGKNGLYCVGLSRKG--LYGAAADAQNIADHINSIL 392 (395)
Q Consensus 319 ~~D~vi~atG~~~~~~~~~~~~~~~--~~~~g~~~-~~~~~~~~~~~~vya~Gd~~~~--~~~a~~~a~~~a~~i~~~l 392 (395)
++|.||+|+|+.|+. .+....+.. .+++|++. +| +.++ +.|+||++|||++. ...|..||+.+|.+|.+.+
T Consensus 301 ~aD~Vv~a~G~~p~~-~l~~~~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 301 KVDALIFADGRRPDI-NPITQAGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp ECSEEEECCCEEECC-HHHHHTTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred EeCEEEECCCcCcCc-hHHHhcCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 999999999999998 455444222 24678876 66 4555 88999999999864 4489999999999998765
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.69 E-value=6.8e-17 Score=133.79 Aligned_cols=159 Identities=21% Similarity=0.233 Sum_probs=110.7
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCCC
Q 016088 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKPR 267 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (395)
+++|||+|++|+++|..|++.|.+|+++.+++. .+++... +..+ + ++ +.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~-~~~~~~~-----~~~~-~----------------------~~--~~ 51 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGRS-KVKGVSR-----VPNY-P----------------------GL--LD 51 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-TTTTCSC-----CCCS-T----------------------TC--TT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC-cccCchh-----hhcc-C----------------------CC--cC
Confidence 689999999999999999999999999999872 2211000 0000 0 00 00
Q ss_pred CCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC----eEEecCCcEEeCcEEEEccCCCCCccccccCCCC
Q 016088 268 EGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTNVWLKGDDS 342 (395)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~~~~~~~~~ 342 (395)
....+.+...+.+.+++.+++++.+ +++++.+ .+.+++| ++++|.||+|+|..|+. .+..+.
T Consensus 52 ---------~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~---~~~~g~ 118 (180)
T 2ywl_A 52 ---------EPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL---PSLLGL 118 (180)
T ss_dssp ---------CCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH---HHHHTC
T ss_pred ---------CCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc---cccCCC
Confidence 0001122233445566667888777 7777643 3666787 89999999999999854 222222
Q ss_pred ccCCCCCCCCCCCCcccCCCCeEEEecccccc----cCccHHHHHHHHHhhccc
Q 016088 343 MLNDDGIPKQSYPNHWKGKNGLYCVGLSRKGL----YGAAADAQNIADHINSIL 392 (395)
Q Consensus 343 ~~~~~g~~~~~~~~~~~~~~~vya~Gd~~~~~----~~a~~~a~~~a~~i~~~l 392 (395)
..+ +|.+.+| +.++++.|+|||+|||+... ..|..+|+.+|.+|.+.+
T Consensus 119 ~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 119 TRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp CEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ccc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHh
Confidence 345 7889898 57788999999999998764 278999999999998876
No 95
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.1e-20 Score=168.17 Aligned_cols=150 Identities=14% Similarity=0.034 Sum_probs=100.4
Q ss_pred CCeEEEECCChHHHHHHHHHhh--cCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~--~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
.+||+||||||+|++||..|++ .|++|+|||+.+.+||......+. ++...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~-------------------------~~~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL-------------------------FSAMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT-------------------------CCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc-------------------------CCHHHHH
Confidence 5799999999999999999975 499999999999888854321110 0000001
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCCCcccccc
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIRGLSSFCS 164 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~g~~~~~~ 164 (395)
..+..+++++++++ ..+. . .....+.++++++ ..+..+.++|...+
T Consensus 120 ~~~~~~~~e~Gv~~--~~~~------------~----------------~~~~~~~~~~~~~--~~~~~~~~~g~~~~-- 165 (326)
T 3fpz_A 120 KPAHLFLQELEIPY--EDEG------------D----------------YVVVKHAALFIST--VLSKVLQLPNVKLF-- 165 (326)
T ss_dssp TTTHHHHHHTTCCC--EECS------------S----------------EEEESCHHHHHHH--HHHHHHTSTTEEEE--
T ss_pred HHHHHHHHHcCCEE--EECC------------c----------------ceecceeEEEEcc--hhhhccccccceee--
Confidence 11223344556553 2110 0 3334445556666 45666677777766
Q ss_pred CCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+.....+..++.....+++++|+|+|.++++.|..+...+.++++..+..
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 ----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp ----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 554444444455556678999999999999999999999999999887655
No 96
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.63 E-value=4.8e-16 Score=144.81 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=88.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc---------CCCCc---eeeccccccc----cC-----
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYDR---LRLHLAKQFC----QL----- 65 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~---------~~~~~---l~~~~~~~~~----~~----- 65 (395)
++||+|||||++|+++|..|+++|.+|+|+|+.+.+|+.|.. +.... .....+.... .+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999999877654321 00000 0000000000 00
Q ss_pred ------CCCCC--CCCCCCCC--CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCC--CCcEEEEEeecCCCCceee
Q 016088 66 ------PHLPF--PSSYPMFV--SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIE 133 (395)
Q Consensus 66 ------~~~~~--~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~ 133 (395)
...++ ..+-..|+ ...++.+.+.+.+++.++++ +++++|+++..+++ .+.|.|.+.+
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i--~~~~~v~~i~~~~~g~~~~~~v~~~~--------- 152 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI--LLRSEVSQVERIQNDEKVRFVLQVNS--------- 152 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE--ECSCCEEEEEECCSCSSCCEEEEETT---------
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE--EeCCEEEEEEcccCcCCCeEEEEECC---------
Confidence 00000 00000111 56788888988888888776 99999999987511 2457777643
Q ss_pred EEEEeCEEEEeecCCCCCC
Q 016088 134 EYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 134 ~~~~~d~vVlAtG~~~~p~ 152 (395)
..++||+||+|||.++.|.
T Consensus 153 g~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 153 TQWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp EEEEESEEEECCCCSSCGG
T ss_pred CEEECCEEEECCCCccCCC
Confidence 6799999999999776553
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.60 E-value=3.1e-16 Score=149.37 Aligned_cols=193 Identities=12% Similarity=0.056 Sum_probs=103.7
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcc--cccCC-----CC--ceee-----------------------
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI--WKKYS-----YD--RLRL----------------------- 56 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~--~~~~~-----~~--~l~~----------------------- 56 (395)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|. |.... .+ ....
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44442 11110 00 0000
Q ss_pred ccccccccC--CCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcE-EE
Q 016088 57 HLAKQFCQL--PHLPFPS--------SYP-----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NV 120 (395)
Q Consensus 57 ~~~~~~~~~--~~~~~~~--------~~~-----~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~-~v 120 (395)
..+.....+ ...++.. ..+ ...+..++.+.+.+.+++.++++ +.++.| ++..++ +.. .+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~Gv 154 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEEE
Confidence 000000000 0001100 000 11235677888887777778776 999999 997754 432 23
Q ss_pred EEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCCCC-CccccccCCCCCcceeecc-----cCCCCCCCCC-CeEEEEc
Q 016088 121 KASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPDIR-GLSSFCSSATGTGEVIHST-----QYKNGKPYGG-KNVLVVG 193 (395)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~~~-g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~v~ViG 193 (395)
...+. . ..+++|.||+|||.++ ..+++. +.... .|..+... ...+.+.... ..++++|
T Consensus 155 ~v~~~-~------g~~~a~~VVlAtGg~~--~~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~g 219 (472)
T 2e5v_A 155 VTEKR-G------LVEDVDKLVLATGGYS--YLYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSLD 219 (472)
T ss_dssp EETTT-E------EECCCSEEEECCCCCG--GGSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECGG
T ss_pred EEEeC-C------CeEEeeeEEECCCCCc--ccCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEccC
Confidence 33221 1 4577999999999644 333321 11111 12111000 0111111111 2344567
Q ss_pred CCCCHHHHHHHHHhhcCeeEEEEecCCcccchh
Q 016088 194 SGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE 226 (395)
Q Consensus 194 ~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~ 226 (395)
+| +++++..+...|..+ +..+.+ ++++..
T Consensus 220 gg--~~~~ae~~~~~G~~~-v~~~g~-rf~~~~ 248 (472)
T 2e5v_A 220 GE--VFLLTETLRGEGAQI-INENGE-RFLFNY 248 (472)
T ss_dssp GC--CEECCTHHHHTTCEE-EETTCC-CGGGGT
T ss_pred CC--ceeeehhhcCCceEE-ECCCCC-CCCccC
Confidence 66 788888887778766 544555 565554
No 98
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=2.1e-12 Score=120.67 Aligned_cols=133 Identities=17% Similarity=0.150 Sum_probs=89.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC------------CCCceeeccccccc----cC----
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYDRLRLHLAKQFC----QL---- 65 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~------------~~~~l~~~~~~~~~----~~---- 65 (395)
..+||+|||||++|+++|..|+++|.+|+|+|+.+..|+.+... ....+....+.... .+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 36899999999999999999999999999999999877643210 00000000000000 00
Q ss_pred -------CCCCC-----CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceee
Q 016088 66 -------PHLPF-----PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIE 133 (395)
Q Consensus 66 -------~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (395)
...++ ...++ .....++.+.+.+.+++.++++ +++++|+++..++ +.|.|.+.+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~--------- 171 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA--------- 171 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT---------
T ss_pred HHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC---------
Confidence 00000 00011 1355688889988888888776 9999999998866 567787754
Q ss_pred EEEEeCEEEEeecCCCCCC
Q 016088 134 EYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 134 ~~~~~d~vVlAtG~~~~p~ 152 (395)
..++||+||+|+|.++.|.
T Consensus 172 g~i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 172 GTVDAASLVVASGGKSIPK 190 (417)
T ss_dssp EEEEESEEEECCCCSSCGG
T ss_pred cEEEeeEEEECCCCccCCC
Confidence 6789999999999877554
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.33 E-value=2.2e-12 Score=111.03 Aligned_cols=176 Identities=19% Similarity=0.192 Sum_probs=100.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKP 266 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (395)
.+++|||+|++|+++|..|++.|.+|+++.+.+.... .+.......+....+...+ .+
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G----~~~~~~~~~~~~~~~~~~~---------~d--------- 61 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM----MPFLPPKPPFPPGSLLERA---------YD--------- 61 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT----CCSSCCCSCCCTTCHHHHH---------CC---------
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC----cccCccccccchhhHHhhh---------cc---------
Confidence 4799999999999999999999999999998741110 0000000000000000000 00
Q ss_pred CCCcchhhccCCCceeeCchhhhhhcCC-cEEEecC-ceEEeCC-----eEEecCCcEEeCcEEEEccCCCCCccccc--
Q 016088 267 REGPFFMKAAYGKYPVIDAGTCEKIKSG-QIQVLPG-IESIRGN-----EVIFENGHSHHFDSIVFCTGFKRSTNVWL-- 337 (395)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~-v~~~~~~-----~v~~~~g~~~~~D~vi~atG~~~~~~~~~-- 337 (395)
..++ ....+...+.+.+++. +++++.. ++.+..+ .+.+.+|+++++|.||+|+|...+.....
T Consensus 62 ~~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 62 PKDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp TTCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETT
T ss_pred CCCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCC
Confidence 0000 1123334455666664 8888755 7766532 46778888899999999999965542110
Q ss_pred -----------------c---CCCCccCC--------CCCCC-------CC------CCCcccCCCCeEEEecccccc--
Q 016088 338 -----------------K---GDDSMLND--------DGIPK-------QS------YPNHWKGKNGLYCVGLSRKGL-- 374 (395)
Q Consensus 338 -----------------~---~~~~~~~~--------~g~~~-------~~------~~~~~~~~~~vya~Gd~~~~~-- 374 (395)
+ ..+....+ .|.|. .. .....++.|+||++|||+ ..
T Consensus 134 ~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g~ 212 (232)
T 2cul_A 134 VVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REGD 212 (232)
T ss_dssp EEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCCC
T ss_pred ccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCcc
Confidence 0 00000000 01100 00 001225899999999998 42
Q ss_pred -cCccHHHHHHHHHhhcccC
Q 016088 375 -YGAAADAQNIADHINSILS 393 (395)
Q Consensus 375 -~~a~~~a~~~a~~i~~~l~ 393 (395)
..+..+|+.+|++|.+.|.
T Consensus 213 ~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 213 YARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHhhcC
Confidence 2778999999999998763
No 100
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.32 E-value=2.4e-11 Score=100.16 Aligned_cols=111 Identities=18% Similarity=0.257 Sum_probs=81.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
+||+|||||++|+.+|..|++.|.+|+++|+.+..-. .. ..+..++. ++......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~---~~----------~~~~~~~~------~~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK---GV----------SRVPNYPG------LLDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT---TC----------SCCCCSTT------CTTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc---Cc----------hhhhccCC------CcCCCCHHHHHHHH
Confidence 6899999999999999999999999999998872211 00 00000111 11224578899999
Q ss_pred HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+++.++++ +.+ +|++++.++ +.+.+++.+ ..+++|.||+|+| ..|+.
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~---------g~i~ad~vI~A~G--~~~~~ 112 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE---------GVEKAERLLLCTH--KDPTL 112 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS---------CEEEEEEEEECCT--TCCHH
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC---------CEEEECEEEECCC--CCCCc
Confidence 99999988776 888 999998765 557777654 5789999999999 45543
No 101
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.30 E-value=7.2e-12 Score=116.63 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=85.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccc--cC--------------------CCCceeecccccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK--KY--------------------SYDRLRLHLAKQFCQ 64 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~--~~--------------------~~~~l~~~~~~~~~~ 64 (395)
.|||+||||||+|+++|..|+++|++|+|+|+++.+|.... .. ...+.....+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 59999999999999999999999999999999876543110 00 000111111110000
Q ss_pred --CCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEE
Q 016088 65 --LPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 65 --~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~v 141 (395)
+..............+..+...+.+.+.+.++++ +++++|+++..+. +... +..... ++. .++++|.|
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~---~~~--~~~~a~~v 154 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHN---NEI--VDVRAKMV 154 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEET---TEE--EEEEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeeccc---ccc--eEEEEeEE
Confidence 0000000011123578889999988888888877 9999999988765 4332 222221 121 67999999
Q ss_pred EEeecCCC
Q 016088 142 VVASGETS 149 (395)
Q Consensus 142 VlAtG~~~ 149 (395)
|.|+|..|
T Consensus 155 IgAdG~~S 162 (397)
T 3oz2_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EeCCcccc
Confidence 99999755
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.29 E-value=1.5e-11 Score=114.73 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=88.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC------------CCC----------ceeeccccc-c-
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYD----------RLRLHLAKQ-F- 62 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~------------~~~----------~l~~~~~~~-~- 62 (395)
++||+|||||++|+++|..|+++|++|+|+|+.+..|+..... ..+ .+....+.. .
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4899999999999999999999999999999988665422110 000 011110100 0
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEE
Q 016088 63 CQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~v 141 (395)
..+..............+..+.+.+.+.+.+.++++ +++++|+++..++ +.+. |.+.+.. .. ..+++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~---~~--~~~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN---EI--VDVRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT---EE--EEEEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE--EECCEEEEEEEeC--CEEEEEEEEECC---eE--EEEEcCEE
Confidence 011100000111223567888899998888888776 9999999998875 6665 6664321 11 78999999
Q ss_pred EEeecCCC
Q 016088 142 VVASGETS 149 (395)
Q Consensus 142 VlAtG~~~ 149 (395)
|.|+|.++
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999765
No 103
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.29 E-value=1.4e-11 Score=105.94 Aligned_cols=125 Identities=16% Similarity=0.049 Sum_probs=81.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
++||+|||||++|+++|..|+++|.+|+|||+.....|.|.......+. .......+.. ..-+.+.++..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~--~~~~~~~~~d-------~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFP--PGSLLERAYD-------PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCC--TTCHHHHHCC-------TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccc--hhhHHhhhcc-------CCCCCHHHHHHH
Confidence 5899999999999999999999999999999974333322111000000 0000000000 000156688888
Q ss_pred HHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 87 LDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 87 l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
+.+.+++. ++.+ + +++|+++..++ +..+.|.+.++ ..++||+||+|+|.++...
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~-~~v~~v~~~~g--------~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG-NRVVGVRTWEG--------PPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET-TEEEEEEETTS--------CCEECSEEEECCTTCSSCE
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC-CEEEEEEECCC--------CEEECCEEEECCCCChhhc
Confidence 88888886 7764 5 68999998765 23345666543 5789999999999755443
No 104
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.28 E-value=2.4e-11 Score=114.18 Aligned_cols=135 Identities=16% Similarity=0.195 Sum_probs=85.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC----CcccccCC--------------------CCceeecccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY----ASIWKKYS--------------------YDRLRLHLAKQF 62 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~----gg~~~~~~--------------------~~~l~~~~~~~~ 62 (395)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. |....... ..+.........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 489999999999999999999999999999998632 22111100 000111111110
Q ss_pred c--cCCCCC-CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeC
Q 016088 63 C--QLPHLP-FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (395)
Q Consensus 63 ~--~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (395)
. .+.... ..........+..+...+.+.+.+.++++ +++++|+++..++ +.+.+......+ +. ..++||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~v~v~~~~g--~~--~~~~a~ 156 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV--EYEVGVTDIKFFG--TDSVTTIEDING--NK--REIEAR 156 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEET--TEEEEEEEETTS--CE--EEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCCC--CE--EEEEcC
Confidence 0 111000 00111224678899999998888888776 9999999999876 444444433221 21 479999
Q ss_pred EEEEeecCCC
Q 016088 140 FLVVASGETS 149 (395)
Q Consensus 140 ~vVlAtG~~~ 149 (395)
.||+|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999654
No 105
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.27 E-value=1.2e-11 Score=119.65 Aligned_cols=172 Identities=13% Similarity=0.167 Sum_probs=100.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC-CCCcc-cccC--------------CCCceeec-cccccccCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASI-WKKY--------------SYDRLRLH-LAKQFCQLPHL 68 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~-~~gg~-~~~~--------------~~~~l~~~-~~~~~~~~~~~ 68 (395)
.++||+|||||++|+++|..|++.|.+|+|||+.. .+|.. +... .+.+.... .......+...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 36899999999999999999999999999999874 23311 0000 00000000 00000000000
Q ss_pred CCCCC-----CCCCCCHHHHHHHHHHHHHh-cCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEE
Q 016088 69 PFPSS-----YPMFVSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLV 142 (395)
Q Consensus 69 ~~~~~-----~~~~~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vV 142 (395)
..... ......+..+...+.+.+++ .+++ .++++|+++..++ +..+.|.+.++ ..++||.||
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~---I~~~~V~~L~~e~-g~V~GV~t~dG--------~~I~Ad~VV 174 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLM---IFQQAVEDLIVEN-DRVVGAVTQMG--------LKFRAKAVV 174 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE---EEECCEEEEEESS-SBEEEEEETTS--------EEEEEEEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCE---EEEEEEEEEEecC-CEEEEEEECCC--------CEEECCEEE
Confidence 00000 00113456778888888877 4766 3678999998754 23445666554 789999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEe
Q 016088 143 VASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (395)
Q Consensus 143 lAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r 217 (395)
+|||.+ +..+.++|...+ . +.+ +| +.++++++..|.+.|.+|+.+..
T Consensus 175 LATGt~--s~~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 175 LTVGTF--LDGKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp ECCSTT--TCCEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EcCCCC--ccCccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 999954 443344444432 0 122 56 78899999999999999998853
No 106
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.24 E-value=7.3e-12 Score=119.99 Aligned_cols=139 Identities=16% Similarity=0.136 Sum_probs=88.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCcee--eccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLR--LHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
..+||+|||||++|+++|..|++.|++|+|||+.+.+|+....+..+... +...........+. .......++.++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFC--TGTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTT--CTTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccc--ccccccCCHHHH
Confidence 36899999999999999999999999999999998776431111110000 00000000000000 000112456788
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeC-CCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDE-ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p 151 (395)
.+.+.+.+++.++++ +++++|+++..++ +.+.|.|++.+... |+. ..+++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~v~~~~~~~-g~~--~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEI--HWGVKFTGLQPPPRKGSGWRAQLQPNPP-AQL--ASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEE--EESCEEEEEECCCSTTCCBEEEEESCCC-HHH--HTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEecCCCCEEEEEEEECCC-CCE--EEEEcCEEEECCCCCccc
Confidence 889988888888776 9999999998752 23467787742100 111 468999999999965544
No 107
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.23 E-value=5e-11 Score=115.85 Aligned_cols=134 Identities=17% Similarity=0.143 Sum_probs=86.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcc-------------------cccCCCCceeec---cccc---
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI-------------------WKKYSYDRLRLH---LAKQ--- 61 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~-------------------~~~~~~~~l~~~---~~~~--- 61 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+..... |..-.-...... ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 579999999999999999999999999999997754311 110000000000 0000
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEE
Q 016088 62 FCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~v 141 (395)
.+.+.............++..+.+.+.+.+.+.++++ +++++|++++.++ +.+.|++.... |+ .+++||+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~--G~---~~~~a~~v 199 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPS--GP---YPVRARYG 199 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETT--EE---EEEEESEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCC--Cc---EEEEeCEE
Confidence 0011111111111234678899999999888888776 9999999998766 56777774321 11 57999999
Q ss_pred EEeecCCC
Q 016088 142 VVASGETS 149 (395)
Q Consensus 142 VlAtG~~~ 149 (395)
|.|+|..|
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999766
No 108
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.23 E-value=2.4e-11 Score=113.74 Aligned_cols=132 Identities=23% Similarity=0.299 Sum_probs=85.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcc------c-------------c-----cCCCCceeecccc-
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASI------W-------------K-----KYSYDRLRLHLAK- 60 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~------~-------------~-----~~~~~~l~~~~~~- 60 (395)
.++||+|||||++|+++|..|+++|++|+|+|+.+..... + . ......+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3689999999999999999999999999999998754311 0 0 0011111111110
Q ss_pred --ccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEE
Q 016088 61 --QFCQLPHLPFP---SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (395)
Q Consensus 61 --~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (395)
....++..... .......++..+.+.+.+.+.+ ..+ +++++|++++.++ +.+.|++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~ 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSV--QFGKRVTRCEEDA--DGVTVWFTDG--------SS 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGE--EESCCEEEEEEET--TEEEEEETTS--------CE
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEE--EECCEEEEEEecC--CcEEEEEcCC--------CE
Confidence 00111100000 0112235677888888887766 444 9999999999876 6777887765 68
Q ss_pred EEeCEEEEeecCCCCC
Q 016088 136 YSGRFLVVASGETSNP 151 (395)
Q Consensus 136 ~~~d~vVlAtG~~~~p 151 (395)
+++|.||.|+|.+|.-
T Consensus 168 ~~a~~vV~AdG~~S~v 183 (407)
T 3rp8_A 168 ASGDLLIAADGSHSAL 183 (407)
T ss_dssp EEESEEEECCCTTCSS
T ss_pred EeeCEEEECCCcChHH
Confidence 9999999999976643
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.22 E-value=6e-11 Score=113.68 Aligned_cols=136 Identities=21% Similarity=0.177 Sum_probs=89.1
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc--------------CCCCceeecccccc-------c
Q 016088 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQF-------C 63 (395)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~--------------~~~~~l~~~~~~~~-------~ 63 (395)
+..+||+|||||++|+++|..|+++|++|+|||+.+..+..-+. ...+.+....+... +
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 44689999999999999999999999999999998755321100 00111100000000 0
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEE
Q 016088 64 QLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (395)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVl 143 (395)
.+.............++..+.+.+.+.+.+.++++ +++++|+++..++ +.+++++.++. ++ .++++|+||.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVg 159 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADI--RRGHEVLSLTDDG--AGVTVEVRGPE--GK---HTLRAAYLVG 159 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEE--EETCEEEEEEEET--TEEEEEEEETT--EE---EEEEESEEEE
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEE--ECCcEEEEEEEcC--CeEEEEEEcCC--CC---EEEEeCEEEE
Confidence 00000000001123467888899998888888766 9999999999876 56777777642 12 5899999999
Q ss_pred eecCCC
Q 016088 144 ASGETS 149 (395)
Q Consensus 144 AtG~~~ 149 (395)
|+|..|
T Consensus 160 ADG~~S 165 (500)
T 2qa1_A 160 CDGGRS 165 (500)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999876
No 110
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.21 E-value=5.1e-11 Score=114.76 Aligned_cols=142 Identities=22% Similarity=0.302 Sum_probs=86.5
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC----CCcccccC----------CCCc-----ee------
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENC----YASIWKKY----------SYDR-----LR------ 55 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~----~gg~~~~~----------~~~~-----l~------ 55 (395)
|++...++||+|||||++|+++|..|+++|++|+|||+.+. .|..+... ..+. ..
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 55444568999999999999999999999999999999872 22211100 0000 00
Q ss_pred eccccc----cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcE-EEEEeecCCCC
Q 016088 56 LHLAKQ----FCQLPHLPF-PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPG 129 (395)
Q Consensus 56 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~ 129 (395)
...... .+.+...+. .........+..+...+.+.+.+.++++ +++++|+++..++ +.. .|.+.... |
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~~~~V~~v~~~~--~~v~gv~~~~~d--G 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV--RERHEVIDVLFEG--ERAVGVRYRNTE--G 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEET--TEEEEEEEECSS--S
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEEC--CEEEEEEEEeCC--C
Confidence 000000 001111000 0011223678899999999888888776 9999999999865 432 24443321 1
Q ss_pred ceeeEEEEeCEEEEeecCCCC
Q 016088 130 RVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 130 ~~~~~~~~~d~vVlAtG~~~~ 150 (395)
+. ..+++|.||.|+|.++.
T Consensus 155 ~~--~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 155 VE--LMAHARFIVDASGNRTR 173 (512)
T ss_dssp CE--EEEEEEEEEECCCTTCS
T ss_pred CE--EEEEcCEEEECCCcchH
Confidence 21 58999999999997653
No 111
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.20 E-value=8e-11 Score=112.79 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=89.4
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc--------------CCCCceeeccccc-------cc
Q 016088 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQ-------FC 63 (395)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~--------------~~~~~l~~~~~~~-------~~ 63 (395)
+.++||+|||||++|+++|..|+++|++|+|||+.+..+...+. ...+.+....+.. .+
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 34689999999999999999999999999999998755321100 0011110000000 00
Q ss_pred cCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEE
Q 016088 64 QLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (395)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVl 143 (395)
.+.............++..+.+.+.+.+.+.++++ +++++|+++..++ +.++|++.++. ++ .++++|+||.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~--g~---~~~~a~~vVg 160 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAEL--LRGHTVRALTDEG--DHVVVEVEGPD--GP---RSLTTRYVVG 160 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEE--EESCEEEEEEECS--SCEEEEEECSS--CE---EEEEEEEEEE
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCC--Cc---EEEEeCEEEE
Confidence 00000000011123467889999998888888766 9999999998866 56777776642 12 5899999999
Q ss_pred eecCCC
Q 016088 144 ASGETS 149 (395)
Q Consensus 144 AtG~~~ 149 (395)
|+|..|
T Consensus 161 ADG~~S 166 (499)
T 2qa2_A 161 CDGGRS 166 (499)
T ss_dssp CCCTTC
T ss_pred ccCccc
Confidence 999876
No 112
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.20 E-value=5.9e-11 Score=114.50 Aligned_cols=169 Identities=12% Similarity=0.088 Sum_probs=105.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC-CCCcccccCCCCceee----------c-cccc--------cccC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRL----------H-LAKQ--------FCQL 65 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~-~~gg~~~~~~~~~l~~----------~-~~~~--------~~~~ 65 (395)
..+||+|||||++|++||..|++.|.+|+|||+.. .+|.. . +.+.... . .... ...+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~-~--Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM-S--CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC-C--SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc-C--ccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999999999999874 33321 0 0000000 0 0000 0000
Q ss_pred CCCCCCC----C-CCCCCCHHHHHHHHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeC
Q 016088 66 PHLPFPS----S-YPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR 139 (395)
Q Consensus 66 ~~~~~~~----~-~~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 139 (395)
....... + ......+..+...+.+.+++. +++ .++++|+++..++ +..+.|.+.++ ..++|+
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe---I~~~~Vt~L~~e~-g~V~GV~t~dG--------~~i~Ad 170 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLY---IKQEEVVDIIVKN-NQVVGVRTNLG--------VEYKTK 170 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE---EEESCEEEEEESS-SBEEEEEETTS--------CEEECS
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCE---EEEeEEEEEEecC-CEEEEEEECCC--------cEEEeC
Confidence 0000000 0 001224567888888888774 766 3578999998754 23345666654 689999
Q ss_pred EEEEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEe
Q 016088 140 FLVVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (395)
Q Consensus 140 ~vVlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r 217 (395)
.||+|||. .+..+.++|...+ . ..+ + |+.++++++..|.+.|.+++.+.+
T Consensus 171 aVVLATG~--~s~~~~~~G~~~~------~----------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 171 AVVVTTGT--FLNGVIYIGDKMI------P----------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEEECCTT--CBTCEEEETTEEE------E----------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEE
T ss_pred EEEEccCC--CccCceeccceec------C----------------CCC---C-CchhHHHHHHHHHhcCCceEEecC
Confidence 99999994 4444444454433 1 111 2 356889999999999999887765
No 113
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.20 E-value=1.3e-10 Score=112.68 Aligned_cols=134 Identities=18% Similarity=0.174 Sum_probs=89.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC------------------------CCCc---e---ee
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYDR---L---RL 56 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~------------------------~~~~---l---~~ 56 (395)
++||+|||||++|+++|..|+++|++|+|||+.+..+..-+.. .... + ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 5899999999999999999999999999999987543211000 0000 0 00
Q ss_pred c-ccc-ccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCC----cEEEE
Q 016088 57 H-LAK-QFC----QLPH-----LPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATN----MWNVK 121 (395)
Q Consensus 57 ~-~~~-~~~----~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~----~~~v~ 121 (395)
. ... .+. .+.. ...........++..+...+.+.+++.++++ +++++|+++..++ + .++++
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~~~v~v~ 160 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAI--RFGTRLLSFRQHD--DDAGAGVTAR 160 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEEC--GGGCSEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEECC--CCccccEEEE
Confidence 0 000 000 0000 0000011234678899999999998888766 9999999999876 4 67777
Q ss_pred EeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 122 ASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 122 ~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
+.++.+ + .+++||+||.|+|.+|
T Consensus 161 ~~~~~~--~---~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 161 LAGPDG--E---YDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEETTE--E---EEEEEEEEEECCCTTC
T ss_pred EEcCCC--e---EEEEeCEEEECCCCcc
Confidence 776421 2 7899999999999866
No 114
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.19 E-value=1e-10 Score=110.55 Aligned_cols=63 Identities=6% Similarity=0.067 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeee---eEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~---~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
....+...+.+.+++.++++ ++++ +|+++..+. +.+. |++.++ .+++||.||+|+|.++....
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i--~~~t~~~~V~~i~~~~--~~v~gV~t~~G--------~~i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKF--VTGTPQGRVVTLIFEN--NDVKGAVTADG--------KIWRAERTFLCAGASAGQFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESTTTTCEEEEEEET--TEEEEEEETTT--------EEEECSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHhcCCEE--EeCCcCceEEEEEecC--CeEEEEEECCC--------CEEECCEEEECCCCChhhhc
Confidence 34678888888888888776 9998 999998865 6666 777664 68999999999998765433
No 115
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.19 E-value=1e-10 Score=109.11 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=82.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC-----CcccccCCCCce---------------------ee-ccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY-----ASIWKKYSYDRL---------------------RL-HLA 59 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~-----gg~~~~~~~~~l---------------------~~-~~~ 59 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+.. |+.+.......+ .. ...
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 589999999999999999999999999999998643 222221100000 00 000
Q ss_pred c-ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEE
Q 016088 60 K-QFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYS 137 (395)
Q Consensus 60 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 137 (395)
. ..+... .+.. ........+..+.+.+.+.+.. . .++++++|+++..++ +.|.|++.++ .+++
T Consensus 106 g~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ 170 (398)
T 2xdo_A 106 GNILSTKN-VKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK--KKWTLTFENK--------PSET 170 (398)
T ss_dssp SEEEEECC-CGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS--SSEEEEETTS--------CCEE
T ss_pred CCchhhcc-ccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC--CEEEEEECCC--------cEEe
Confidence 0 000000 0000 0011134667777777765432 3 349999999998865 5688887764 5789
Q ss_pred eCEEEEeecCCCCC
Q 016088 138 GRFLVVASGETSNP 151 (395)
Q Consensus 138 ~d~vVlAtG~~~~p 151 (395)
+|.||.|+|..|..
T Consensus 171 ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 171 ADLVILANGGMSKV 184 (398)
T ss_dssp ESEEEECSCTTCSC
T ss_pred cCEEEECCCcchhH
Confidence 99999999976643
No 116
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.19 E-value=8e-11 Score=107.10 Aligned_cols=129 Identities=14% Similarity=0.215 Sum_probs=77.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeecccccccc-----------------------
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQ----------------------- 64 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~----------------------- 64 (395)
+||+|||||++|+++|..|+++|++|+|+|+.+..||.+..........+.....+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 699999999999999999999999999999998888765532222111111000000
Q ss_pred -----CCCC---CCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEE
Q 016088 65 -----LPHL---PFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYY 136 (395)
Q Consensus 65 -----~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (395)
+... ........+.....+....+..++ ++++ +++++|+++..++ +.|.|++.++ + ...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i--~~~~~v~~i~~~~--~~~~v~~~~g----~---~~~ 149 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPV--SFSCRITEVFRGE--EHWNLLDAEG----Q---NHG 149 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCE--ECSCCEEEEEECS--SCEEEEETTS----C---EEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcE--EecCEEEEEEEeC--CEEEEEeCCC----c---Ccc
Confidence 0000 000000111111112222222222 5555 9999999999866 6788887654 1 444
Q ss_pred EeCEEEEeecCCC
Q 016088 137 SGRFLVVASGETS 149 (395)
Q Consensus 137 ~~d~vVlAtG~~~ 149 (395)
++|+||+|+|..+
T Consensus 150 ~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 150 PFSHVIIATPAPQ 162 (336)
T ss_dssp EESEEEECSCHHH
T ss_pred ccCEEEEcCCHHH
Confidence 6999999999644
No 117
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.19 E-value=1.9e-10 Score=112.23 Aligned_cols=141 Identities=16% Similarity=0.239 Sum_probs=87.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhc------CCCeEEEecCCCCCcccc-cC-------------------CCC------ce
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENCYASIWK-KY-------------------SYD------RL 54 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~------~~~v~vie~~~~~gg~~~-~~-------------------~~~------~l 54 (395)
.+||+|||||++|+++|..|+++ |++|+|||+.+..|+... .. ... .+
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 48999999999999999999999 999999999887664311 00 000 00
Q ss_pred eeccccccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeec--CCCC
Q 016088 55 RLHLAKQFCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNL--LSPG 129 (395)
Q Consensus 55 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~--~~~~ 129 (395)
..........++..+ .........++.++.+.+.+.+++.++++ +++++|+++..+++.....|.+.+. ...|
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEV--YPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 000000011111111 00011223577899999999898888776 9999999998765322333665530 0001
Q ss_pred ce-----eeEEEEeCEEEEeecCCC
Q 016088 130 RV-----IEEYYSGRFLVVASGETS 149 (395)
Q Consensus 130 ~~-----~~~~~~~d~vVlAtG~~~ 149 (395)
+. ....+++|+||+|+|.++
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTC
T ss_pred CcccccCCceEEECCEEEEeeCCCc
Confidence 10 004799999999999765
No 118
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.18 E-value=4.8e-11 Score=112.97 Aligned_cols=134 Identities=19% Similarity=0.270 Sum_probs=87.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC--CCCceee---------cc---cccc----ccC---
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SYDRLRL---------HL---AKQF----CQL--- 65 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~--~~~~l~~---------~~---~~~~----~~~--- 65 (395)
.+||+|||||++|+++|..|+++|.+|+|+|+.+..|+..... ....+.. .. +... ..+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 5899999999999999999999999999999988766421100 0000000 00 0000 000
Q ss_pred --------CCCCCC-----CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCcee
Q 016088 66 --------PHLPFP-----SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVI 132 (395)
Q Consensus 66 --------~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~ 132 (395)
...++. ..++.......+.+.+.+.+++.++++ +++++|+++..++ +..|.|.+.++
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i--~~~~~V~~i~~~~-~~v~~V~~~~G------- 175 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI--RTNTPVETIEYEN-GQTKAVILQTG------- 175 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTC-------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE--EeCcEEEEEEecC-CcEEEEEECCC-------
Confidence 000000 001111246788888888888888776 9999999998754 23377887653
Q ss_pred eEEEEeCEEEEeecCCCCC
Q 016088 133 EEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 133 ~~~~~~d~vVlAtG~~~~p 151 (395)
..++||.||+|+|.++.|
T Consensus 176 -~~i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 -EVLETNHVVIAVGGKSVP 193 (447)
T ss_dssp -CEEECSCEEECCCCSSSG
T ss_pred -CEEECCEEEECCCCCcCC
Confidence 569999999999987744
No 119
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.17 E-value=3.4e-11 Score=109.93 Aligned_cols=128 Identities=16% Similarity=0.233 Sum_probs=81.2
Q ss_pred CeEEEECCChHHHHHHHHHhh---cCCCeEEEecCCCCCcccccCC---CCceeeccccccccCCC--------------
Q 016088 8 VEVIIVGAGPSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPH-------------- 67 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~---~~~~v~vie~~~~~gg~~~~~~---~~~l~~~~~~~~~~~~~-------------- 67 (395)
+||+|||||++|+++|..|++ .|++|+|+|+.+..||.+.... +.....+.....+....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 489999999999999999999 8999999999999988665321 11112221111110000
Q ss_pred ---C--CCC---------CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceee
Q 016088 68 ---L--PFP---------SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIE 133 (395)
Q Consensus 68 ---~--~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (395)
. ++. .....+.....+..+.+..++..+..+ +++++|+++..++ +.|.|++.++
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i--~~~~~V~~i~~~~--~~~~v~~~~g-------- 149 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEV--YFRHRVTQINLRD--DKWEVSKQTG-------- 149 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEESSS--------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEE--EeCCEEEEEEEcC--CEEEEEECCC--------
Confidence 0 000 000011112223334444445456555 9999999999865 6788888764
Q ss_pred EEEEeCEEEEeecC
Q 016088 134 EYYSGRFLVVASGE 147 (395)
Q Consensus 134 ~~~~~d~vVlAtG~ 147 (395)
..+++|.||+|+..
T Consensus 150 ~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 SPEQFDLIVLTMPV 163 (342)
T ss_dssp CCEEESEEEECSCH
T ss_pred CEEEcCEEEECCCH
Confidence 45799999999984
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.16 E-value=2.2e-10 Score=110.06 Aligned_cols=132 Identities=21% Similarity=0.315 Sum_probs=83.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCC-------cccccCCCCc------------------eeeccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR------------------LRLHLAKQ 61 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~g-------g~~~~~~~~~------------------l~~~~~~~ 61 (395)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.|....... +.......
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987552 2232211000 00000000
Q ss_pred cc-------cCCCCCCC-----CCCCCC--CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCC
Q 016088 62 FC-------QLPHLPFP-----SSYPMF--VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (395)
Q Consensus 62 ~~-------~~~~~~~~-----~~~~~~--~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~ 127 (395)
.+ .+.....+ ...+.. .....+.+.+.+.+++.++++ +++++|+++..++ +..+.|.+.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 00 00000000 000000 113567778888888888777 9999999998765 23455777654
Q ss_pred CCceeeEEEEeCEEEEeecCCC
Q 016088 128 PGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 128 ~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
..++||.||+|+|.++
T Consensus 262 ------~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ------EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ------CEEECSCEEECCCTTC
T ss_pred ------CEEECCEEEECCCCCh
Confidence 6799999999999765
No 121
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.16 E-value=7.1e-11 Score=109.42 Aligned_cols=125 Identities=13% Similarity=0.093 Sum_probs=83.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc------------------------CCCCceeecccc-c
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK------------------------YSYDRLRLHLAK-Q 61 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~------------------------~~~~~l~~~~~~-~ 61 (395)
.+||+|||||++|+++|..|+++|++|+|+|+.+..++.-.. .....+...... .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 589999999999999999999999999999998765421000 000001000000 0
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEE
Q 016088 62 FCQLPHLPFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~v 141 (395)
...++ .........++.++.+.+.+.+.+.++++ +++++|++++. + + .|++.++ .++++|.|
T Consensus 91 ~~~~~---~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~-~--~--~v~~~~g--------~~~~ad~v 152 (379)
T 3alj_A 91 VSKET---FNGLPWRIMTRSHLHDALVNRARALGVDI--SVNSEAVAADP-V--G--RLTLQTG--------EVLEADLI 152 (379)
T ss_dssp EEEEC---GGGCCEEEEEHHHHHHHHHHHHHHTTCEE--ESSCCEEEEET-T--T--EEEETTS--------CEEECSEE
T ss_pred eeecc---CCCCceEEECHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEe-C--C--EEEECCC--------CEEEcCEE
Confidence 00000 00001123567889999998888878776 99999999986 2 3 6777654 67999999
Q ss_pred EEeecCCC
Q 016088 142 VVASGETS 149 (395)
Q Consensus 142 VlAtG~~~ 149 (395)
|+|+|..+
T Consensus 153 V~AdG~~s 160 (379)
T 3alj_A 153 VGADGVGS 160 (379)
T ss_dssp EECCCTTC
T ss_pred EECCCccH
Confidence 99999655
No 122
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.15 E-value=1.2e-10 Score=108.66 Aligned_cols=131 Identities=15% Similarity=0.114 Sum_probs=86.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc------cccc--------CC----------CCceeeccc-c-
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS------IWKK--------YS----------YDRLRLHLA-K- 60 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg------~~~~--------~~----------~~~l~~~~~-~- 60 (395)
++||+|||||++|+++|..|+++|++|+|+|+.+.... .+.. .. ...+..... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 58999999999999999999999999999999875411 0000 00 000100000 0
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcE--EEEEeecCCCCceeeEEE
Q 016088 61 QFCQLPHLPFP-SSYPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMW--NVKASNLLSPGRVIEEYY 136 (395)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~--~v~~~~~~~~~~~~~~~~ 136 (395)
....+...... ........+.++.+.+.+.+.+. ++++ +++++|+++..++ +.+ .|++.++ ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~g~v~~~~g--------~~~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEM--LFETRIEAVQRDE--RHAIDQVRLNDG--------RVL 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEE--ECSCCEEEEEECT--TSCEEEEEETTS--------CEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEE--EcCCEEEEEEEcC--CceEEEEEECCC--------CEE
Confidence 00011100000 01112467889999999888887 7666 9999999998865 556 6777654 678
Q ss_pred EeCEEEEeecCCC
Q 016088 137 SGRFLVVASGETS 149 (395)
Q Consensus 137 ~~d~vVlAtG~~~ 149 (395)
++|.||.|+|.++
T Consensus 154 ~ad~vV~AdG~~s 166 (399)
T 2x3n_A 154 RPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999765
No 123
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.14 E-value=4.4e-10 Score=111.00 Aligned_cols=140 Identities=19% Similarity=0.245 Sum_probs=88.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhh-cCCCeEEEecCCCCCcccccC--------------C----------CCceeeccc-
Q 016088 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCYASIWKKY--------------S----------YDRLRLHLA- 59 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie~~~~~gg~~~~~--------------~----------~~~l~~~~~- 59 (395)
..+||+|||||++|+++|..|++ .|++|+|||+.+..+...+.. . ...+....+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 45899999999999999999999 999999999987543211100 0 000000000
Q ss_pred ----cccc---cCCCC--CCCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCC--CCcEEEEEee----
Q 016088 60 ----KQFC---QLPHL--PFPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASN---- 124 (395)
Q Consensus 60 ----~~~~---~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~--~~~~~v~~~~---- 124 (395)
.... .++.. ..........++..+.+.+.+.+.+.++.+.++++++|+++..+++ ...++|++.+
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 0000 00000 0000111235778999999999988876223399999999987652 2357777664
Q ss_pred cCCCCceeeEEEEeCEEEEeecCCC
Q 016088 125 LLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 125 ~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.. |+. .++++|+||.|+|..|
T Consensus 191 ~~--G~~--~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 191 HA--GQI--ETVQARYVVGCDGARS 211 (639)
T ss_dssp GT--TCE--EEEEEEEEEECCCTTC
T ss_pred CC--CCe--EEEEeCEEEECCCcch
Confidence 11 122 6899999999999876
No 124
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.13 E-value=4.8e-10 Score=108.81 Aligned_cols=133 Identities=17% Similarity=0.250 Sum_probs=85.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC------------------------CCC----ceeecc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYD----RLRLHL 58 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~------------------------~~~----~l~~~~ 58 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+..+...+.. ... ......
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4799999999999999999999999999999987654221110 000 010110
Q ss_pred -cc-ccccCCCCC--------CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCC
Q 016088 59 -AK-QFCQLPHLP--------FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (395)
Q Consensus 59 -~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~ 128 (395)
.. ....+.... .........++..+.+.+.+.+.+. ++++++|+++..++ +.+++++.+..+
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~--~~v~v~~~~~~~- 177 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD--DHVRATITDLRT- 177 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--SCEEEEEEETTT-
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--CEEEEEEEECCC-
Confidence 00 011111000 0001112356778888888888775 49999999998866 567777766211
Q ss_pred CceeeEEEEeCEEEEeecCCC
Q 016088 129 GRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 129 ~~~~~~~~~~d~vVlAtG~~~ 149 (395)
|+. .+++||+||.|+|..|
T Consensus 178 G~~--~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 178 GAT--RAVHARYLVACDGASS 196 (549)
T ss_dssp CCE--EEEEEEEEEECCCTTC
T ss_pred CCE--EEEEeCEEEECCCCCc
Confidence 121 6799999999999876
No 125
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.13 E-value=3e-10 Score=110.66 Aligned_cols=135 Identities=15% Similarity=0.119 Sum_probs=87.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc-------------CCC-----------Cceeeccc--c
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK-------------YSY-----------DRLRLHLA--K 60 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~-------------~~~-----------~~l~~~~~--~ 60 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+..+..... ... ........ .
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 589999999999999999999999999999998533211000 000 00000000 0
Q ss_pred c--cccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEE
Q 016088 61 Q--FCQLPHLP---FPSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (395)
Q Consensus 61 ~--~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (395)
. .+.+.... +.........+..+...+.+.+.+.++++ +++++|+++..++ +..+.|++.++ |+. ..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~---G~~--~~ 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRG---GES--VT 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEET---TEE--EE
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecC---Cce--EE
Confidence 0 00111000 00111123577889999999888888776 9999999998753 35677887742 121 68
Q ss_pred EEeCEEEEeecCCC
Q 016088 136 YSGRFLVVASGETS 149 (395)
Q Consensus 136 ~~~d~vVlAtG~~~ 149 (395)
++||.||.|+|..+
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999755
No 126
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.11 E-value=3.6e-10 Score=104.01 Aligned_cols=63 Identities=8% Similarity=0.012 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
....+.+.+.+.+++.++++ +++++|+++..++ ++.+.|.+.++.. ..++||.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g~~------~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGAEP------MTLSCRVLINAAGLHAP 210 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTTSC------EEEEEEEEEECCGGGHH
T ss_pred CHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCCce------eEEEeCEEEECCCcchH
Confidence 45678888888888888776 8999999999865 3448888776533 68999999999998763
No 127
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.11 E-value=1.2e-10 Score=112.75 Aligned_cols=172 Identities=16% Similarity=0.141 Sum_probs=102.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC-CCCcccccCC---------------CCcee---eccccccccC-
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN-CYASIWKKYS---------------YDRLR---LHLAKQFCQL- 65 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~-~~gg~~~~~~---------------~~~l~---~~~~~~~~~~- 65 (395)
.++||+|||||++|+++|..|++.|.+|+|+|+.. .+|+.+-... +.++. .+.....+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 46899999999999999999999999999999874 3443211000 00000 0000000000
Q ss_pred CCCCCCC-C-CCCCCCHHHHHHHHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEE
Q 016088 66 PHLPFPS-S-YPMFVSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFL 141 (395)
Q Consensus 66 ~~~~~~~-~-~~~~~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~v 141 (395)
.....+. + ......+..+...+.+.++++ +++ .++..|+++..++ +.+. |.+.++ ..++||.|
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~---I~~~~V~~L~~d~--g~V~GV~t~~G--------~~i~Ad~V 166 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID---LLQDTVIGVSANS--GKFSSVTVRSG--------RAIQAKAA 166 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE---EEECCEEEEEEET--TEEEEEEETTS--------CEEEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCE---EEeeEEEEEEecC--CEEEEEEECCC--------cEEEeCEE
Confidence 0000000 0 001235567888888888775 766 3567899987755 4443 666544 68999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCcceeecccCCCCCCCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEe
Q 016088 142 VVASGETSNPFTPDIRGLSSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIR 217 (395)
Q Consensus 142 VlAtG~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r 217 (395)
|+|||.++ +.+.+.|...+ . ..++ + |+.++++++..|.+.|.+|..+..
T Consensus 167 VLATG~~s--~~~i~~G~~~~------~----------------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 167 ILACGTFL--NGLIHIGMDHF------P----------------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EECCTTCB--TCEEEETTEEE------E----------------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred EECcCCCC--Cccceeeeeee------c----------------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 99999543 32222222221 0 0111 1 367888999999999999877754
No 128
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.11 E-value=7.2e-10 Score=108.20 Aligned_cols=138 Identities=14% Similarity=0.153 Sum_probs=86.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC--C----CCcee----e-cc-----------------
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--S----YDRLR----L-HL----------------- 58 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~--~----~~~l~----~-~~----------------- 58 (395)
.+||+|||||++|+++|..|+++|.+|+|+|+.+..||..... . ...+. . ..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5899999999999999999999999999999999887643211 0 00000 0 00
Q ss_pred ccc-------------cccCCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEE
Q 016088 59 AKQ-------------FCQLPHLPFP-------SSYP-------MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (395)
Q Consensus 59 ~~~-------------~~~~~~~~~~-------~~~~-------~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~ 111 (395)
+.. ++.-...++. ..++ .......+.+.+.+.+++.++++ +++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i--~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDL--RMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEeeEeEE
Confidence 000 0000000010 0000 01335788889988888888776 99999999987
Q ss_pred eCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
++++..+.|...+.. ++. ..+++|.||+|||.++.
T Consensus 284 ~~~g~v~Gv~~~~~~--g~~--~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMY--KGY--YWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETT--TEE--EEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCC--CcE--EEEECCeEEEeCCCccc
Confidence 542233335554311 121 57999999999997653
No 129
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.11 E-value=1e-10 Score=108.90 Aligned_cols=135 Identities=17% Similarity=0.100 Sum_probs=83.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC------C-c-cccc--------CC----------CCceeeccccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------YS----------YDRLRLHLAKQ 61 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~------g-g-~~~~--------~~----------~~~l~~~~~~~ 61 (395)
+||+|||||++|+++|..|++.|++|+|+|+.+.. + + .+.. .. ...+.......
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999987631 1 1 1110 00 01111110000
Q ss_pred cccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEE-eecCCCCceeeEEEEeC
Q 016088 62 FCQLPHLPF-PSSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGRVIEEYYSGR 139 (395)
Q Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~d 139 (395)
...+..... ........++.++.+.+.+.+.+.++++ +++++|+++..++ ++.+.|++ .++ +. .++++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~~g----~~--~~~~a~ 153 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATT--VYQAAEVRLHDLQ-GERPYVTFERDG----ER--LRLDCD 153 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEECTT-SSSCEEEEEETT----EE--EEEECS
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeE--EeceeEEEEEEec-CCceEEEEecCC----cE--EEEEeC
Confidence 000000000 0001122356778888887777777666 9999999998653 24566776 443 11 379999
Q ss_pred EEEEeecCCCCC
Q 016088 140 FLVVASGETSNP 151 (395)
Q Consensus 140 ~vVlAtG~~~~p 151 (395)
.||.|+|..|..
T Consensus 154 ~vV~AdG~~S~v 165 (394)
T 1k0i_A 154 YIAGCDGFHGIS 165 (394)
T ss_dssp EEEECCCTTCST
T ss_pred EEEECCCCCcHH
Confidence 999999976654
No 130
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.09 E-value=8.6e-10 Score=97.75 Aligned_cols=136 Identities=15% Similarity=0.169 Sum_probs=81.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCCCCCc-ccccC-CCCceeeccccc-cccCCCCCCCCCCCC--CCCH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAKQ-FCQLPHLPFPSSYPM--FVSR 80 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~~~gg-~~~~~-~~~~l~~~~~~~-~~~~~~~~~~~~~~~--~~~~ 80 (395)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+..|+ .|... .+..+....+.. ++.-...++...... ....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 57999999999999999999997 999999999987765 44321 122222111100 000000111100000 1145
Q ss_pred HHHHHHHHHHHHh-cCCcceeeeeeeEEEeEEeCCCCcEEEEEee--------cCCCCceeeEEEEeCEEEEeecC
Q 016088 81 AQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASN--------LLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 81 ~~~~~~l~~~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~--------~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
.++...+.+.+.+ .++++ +++++|+++..++ .....+.+.. +...++. ..++||.||+|+|.
T Consensus 119 ~~~~~~l~~~~~~~~gv~i--~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g~~--~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL--FNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCMDP--NVMEAKIVVSSCGH 189 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE--EETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCCCC--EEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHhcCCCEE--EcCcEEEEEEecC-CeEEEEEEeccccccccCccccCce--EEEECCEEEECCCC
Confidence 6677777666654 57666 9999999998765 2222344431 0000111 67999999999994
No 131
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.08 E-value=1.8e-10 Score=107.41 Aligned_cols=129 Identities=15% Similarity=0.034 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC----Cc-cccc----------CCCCceeeccccccccC--C-CC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY----AS-IWKK----------YSYDRLRLHLAKQFCQL--P-HL 68 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~----gg-~~~~----------~~~~~l~~~~~~~~~~~--~-~~ 68 (395)
.+||+|||||++|+++|..|+++|++|+|+|+.+.. |+ .+.. ...+ .....+...+.+ . ..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCCC
Confidence 589999999999999999999999999999988653 11 1000 0000 000000000000 0 00
Q ss_pred C-CC--CCCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEee
Q 016088 69 P-FP--SSYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVAS 145 (395)
Q Consensus 69 ~-~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAt 145 (395)
. .. ........+..+.+.+.+.+ .++.+ +++++|+++..++ +.+.|++.++ .++++|.||.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~~~ad~vV~Ad 149 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERY--HTSKCLVGLSQDS--ETVQMRFSDG--------TKAEANWVIGAD 149 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTE--ETTCCEEEEEECS--SCEEEEETTS--------CEEEESEEEECC
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEE--EcCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECC
Confidence 0 00 00011234566777776654 25555 9999999998865 5678888764 678999999999
Q ss_pred cCCCC
Q 016088 146 GETSN 150 (395)
Q Consensus 146 G~~~~ 150 (395)
|..|.
T Consensus 150 G~~S~ 154 (397)
T 2vou_A 150 GGASV 154 (397)
T ss_dssp CTTCH
T ss_pred Ccchh
Confidence 97653
No 132
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.07 E-value=1e-09 Score=106.96 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=86.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC--C----CCc------ee----------------ec
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--S----YDR------LR----------------LH 57 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~--~----~~~------l~----------------~~ 57 (395)
..+||+|||||++|+++|..|+++|.+|+|||+.+..||..... . ... +. ..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 35799999999999999999999999999999998777632110 0 000 00 00
Q ss_pred cccc------------------cccC------CCCCCCCCC---CCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeE
Q 016088 58 LAKQ------------------FCQL------PHLPFPSSY---PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESAS 110 (395)
Q Consensus 58 ~~~~------------------~~~~------~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~ 110 (395)
.+.. -..+ ....++... ........+.+.+.+.+++.++++ +++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEEE
Confidence 0000 0000 000000000 011346788899988888888877 9999999998
Q ss_pred EeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 111 YDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.++++..+.|...+.. ++. ..+++|.||+|||.++.
T Consensus 278 ~~~~g~v~Gv~~~~~~--g~~--~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGKH--TGY--YMIGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEETT--TEE--EEEEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEeCC--CcE--EEEEcCEEEEecCCccc
Confidence 7542233335554311 121 47999999999998764
No 133
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.07 E-value=7.1e-10 Score=102.32 Aligned_cols=62 Identities=11% Similarity=0.165 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
...+...+.+.+.+.++++ +.+++|+++..++ +.|.|++.+ ..+++|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i--~~~~~V~~i~~~~--~~~~v~~~~---------g~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQ--LFNCPVTAIRHDD--DGVTIETAD---------GEYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS---------CEEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEcC--CEEEEEECC---------CeEEcCEEEEcCCccHHhhcc
Confidence 3577888888888888776 8899999998865 457776654 458999999999987754443
No 134
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.07 E-value=8.7e-10 Score=102.13 Aligned_cols=61 Identities=16% Similarity=0.002 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 77 FVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
.....++...+.+.+++.++.+ +.+++|+++..++ +.|.|.+.+ ..+++|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEI--FEHTPVLHVERDG--EALFIKTPS---------GDVWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEE--ETTCCCCEEECSS--SSEEEEETT---------EEEEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCEE--EcCCcEEEEEEEC--CEEEEEcCC---------ceEEcCEEEECCChhHH
Confidence 3456788888888888888776 8999999998755 566666543 67899999999997653
No 135
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.07 E-value=4e-10 Score=106.90 Aligned_cols=136 Identities=10% Similarity=0.028 Sum_probs=84.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC--CcccccC-----------CCCc----eeeccccccccCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY--ASIWKKY-----------SYDR----LRLHLAKQFCQLPHLP 69 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~--gg~~~~~-----------~~~~----l~~~~~~~~~~~~~~~ 69 (395)
++||+|||||++|+++|..|+++|++|+|+|+.+.. |..+... .... ............+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 589999999999999999999999999999998753 2221110 0000 0000000000000000
Q ss_pred CCC---CCCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeec-CCCCceeeEEEEeCEEEEe
Q 016088 70 FPS---SYPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNL-LSPGRVIEEYYSGRFLVVA 144 (395)
Q Consensus 70 ~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~-~~~~~~~~~~~~~d~vVlA 144 (395)
... ......++..+.+.+.+.+.+.++++ +++++|+++..++ +.+. |++.+. . |+. ..++||.||.|
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~~--G~~--~~~~ad~VV~A 157 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEI--WDLTTAMKPIFED--GYVKGAVLFNRRT--NEE--LTVYSKVVVEA 157 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET--TEEEEEEEEETTT--TEE--EEEECSEEEEC
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEE--EeCcEEEEEEEEC--CEEEEEEEEEcCC--Cce--EEEEcCEEEEC
Confidence 000 00123567888899988888888776 9999999998765 4433 555431 1 121 58999999999
Q ss_pred ecCCCC
Q 016088 145 SGETSN 150 (395)
Q Consensus 145 tG~~~~ 150 (395)
+|..+.
T Consensus 158 dG~~s~ 163 (453)
T 3atr_A 158 TGYSRS 163 (453)
T ss_dssp CGGGCT
T ss_pred cCCchh
Confidence 997654
No 136
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.06 E-value=6.8e-10 Score=110.58 Aligned_cols=60 Identities=13% Similarity=0.208 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
....+...+.+.+++.++++ +++++|+++..++ +.|.|.+.++ ..+++|.||+|+|.++.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQI--YYQYQLQNFSRKD--DCWLLNFAGD--------QQATHSVVVLANGHQIS 474 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCGGGGG
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeeeEEEEeC--CeEEEEECCC--------CEEECCEEEECCCcchh
Confidence 34678888888888888776 9999999999876 5687877654 67999999999998754
No 137
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.06 E-value=6.1e-10 Score=104.14 Aligned_cols=129 Identities=21% Similarity=0.248 Sum_probs=75.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccc-------cC---------CCCc--------------ee-e
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK-------KY---------SYDR--------------LR-L 56 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~-------~~---------~~~~--------------l~-~ 56 (395)
.+|+|||||++|+++|..|+++|++|+|+|+.+....... .+ ..+. .. .
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5899999999999999999999999999998765421100 00 0000 00 0
Q ss_pred ccccccccCCC--CCCCCCCC----CCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCc
Q 016088 57 HLAKQFCQLPH--LPFPSSYP----MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (395)
Q Consensus 57 ~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~ 130 (395)
+.......... .+...... ....+..+.+.+.+ . +...|+++++|++++..+ ++.++|++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~---~--~~~~v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK---G--LANTIQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHT---T--CTTTEECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHh---h--ccceEEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 00000000000 00000000 01233444444433 2 233459999999998765 35677888776
Q ss_pred eeeEEEEeCEEEEeecCCCC
Q 016088 131 VIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 131 ~~~~~~~~d~vVlAtG~~~~ 150 (395)
.++++|+||.|.|..|.
T Consensus 151 ---~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 151 ---SHENVDVLVGADGSNSK 167 (412)
T ss_dssp ---CEEEESEEEECCCTTCH
T ss_pred ---CEEEeeEEEECCCCCcc
Confidence 67899999999997663
No 138
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.05 E-value=2e-09 Score=100.72 Aligned_cols=136 Identities=21% Similarity=0.171 Sum_probs=84.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-eEEEecCCCCCccccc--------------CCC----------Cceeeccc--
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILERENCYASIWKK--------------YSY----------DRLRLHLA-- 59 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~-v~vie~~~~~gg~~~~--------------~~~----------~~l~~~~~-- 59 (395)
.+||+|||||++|+++|..|+++|++ |+|+|+.+..+..... ... ..+.....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 58999999999999999999999999 9999998765321110 000 00000000
Q ss_pred cccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHh-cC-CcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEE
Q 016088 60 KQFCQLPHL-PFPSSYP-MFVSRAQFIEYLDHYVSH-FN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY 135 (395)
Q Consensus 60 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (395)
...+..+.. ......+ ....+.++.+.+.+.+.+ .+ +.+ +++++|+++.. + +.+.+++.+... |+. .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v--~~~~~v~~i~~-~--~~v~v~~~~~~~-g~~--~~ 155 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAV--RTGLGVERIEE-R--DGRVLIGARDGH-GKP--QA 155 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSE--EESEEEEEEEE-E--TTEEEEEEEETT-SCE--EE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEE--EECCEEEEEec-C--CccEEEEecCCC-CCc--eE
Confidence 000000000 0000011 234677888888887765 35 355 99999999987 4 457777765111 111 57
Q ss_pred EEeCEEEEeecCCCC
Q 016088 136 YSGRFLVVASGETSN 150 (395)
Q Consensus 136 ~~~d~vVlAtG~~~~ 150 (395)
+++|.||.|+|..|.
T Consensus 156 ~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 156 LGADVLVGADGIHSA 170 (410)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EecCEEEECCCccch
Confidence 999999999997664
No 139
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.04 E-value=1.2e-09 Score=98.02 Aligned_cols=105 Identities=21% Similarity=0.282 Sum_probs=65.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCc-ccccC-CCCceeeccccc-cccCCCCCCCC--CCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYAS-IWKKY-SYDRLRLHLAKQ-FCQLPHLPFPS--SYPMFVS 79 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg-~~~~~-~~~~l~~~~~~~-~~~~~~~~~~~--~~~~~~~ 79 (395)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+..|| .|... .+.......... +..-...++.. .+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 58999999999999999999997 999999999887764 56432 222222221110 00000011100 1111123
Q ss_pred HHHHHHHHHHHHHh-cCCcceeeeeeeEEEeEEeC
Q 016088 80 RAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDE 113 (395)
Q Consensus 80 ~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~i~~~~ 113 (395)
..++.+.+.+.+.+ .++++ +.++.|+++..++
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i--~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKL--FNATTVEDLITRK 191 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEE--EETEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEE--EeCCEEEEEEecC
Confidence 56677777776766 47666 8999999887654
No 140
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.03 E-value=2e-09 Score=107.29 Aligned_cols=61 Identities=10% Similarity=0.167 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeE-EEEeCEEEEeecCCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNP 151 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~d~vVlAtG~~~~p 151 (395)
....+...+.+.+++.++++ +++++|+++..++ +.|.|.+.++ . .+++|.||+|+|.++..
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G--------~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTC--HYQHELQRLKRID--SQWQLTFGQS--------QAAKHHATVILATGHRLPE 471 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEECS--SSEEEEEC-C--------CCCEEESEEEECCGGGTTC
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeEeEEEEeC--CeEEEEeCCC--------cEEEECCEEEECCCcchhc
Confidence 34677888888888888776 9999999999866 5688887664 4 78999999999987643
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.03 E-value=1.1e-09 Score=101.41 Aligned_cols=59 Identities=10% Similarity=0.009 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.....+...+.+.+++.++++ +.+++|+++..++ +.+. |.+.+ ..++||.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~v~gv~~~~---------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKL--LEYTEVKGFLIEN--NEIKGVKTNK---------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCceEEEEEEEC--CEEEEEEECC---------cEEECCEEEECcchhH
Confidence 345678888888888888776 8999999998765 5666 66543 6799999999999765
No 142
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.02 E-value=8.5e-10 Score=102.05 Aligned_cols=58 Identities=12% Similarity=0.088 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
....+...+.+.+++.++++ +.+++|+++..+. +.|.|++.+ ..++||.||+|+|.++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~---------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA---------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS---------EEEEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC---------CEEEcCEEEECCChhH
Confidence 44678888888888888776 8999999999876 558787764 6799999999999765
No 143
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.01 E-value=5.4e-09 Score=100.56 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeC-EEEEeecCCC
Q 016088 82 QFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGR-FLVVASGETS 149 (395)
Q Consensus 82 ~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~vVlAtG~~~ 149 (395)
.+...+.+.+++.++++ +++++|+++..+++.....|...++ ++. ..++|+ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~i--~~~t~v~~L~~~~~g~v~GV~~~~~---g~~--~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRA--EYDMRVQTLVTDDTGRVVGIVAKQY---GKE--VAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEE--ECSEEEEEEEECTTCCEEEEEEEET---TEE--EEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEE--EecCEeEEEEECCCCcEEEEEEEEC---CcE--EEEEeCCeEEEeCCChh
Confidence 78888888888888776 9999999998864233334555543 121 579995 9999999876
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.00 E-value=2.9e-09 Score=103.43 Aligned_cols=65 Identities=20% Similarity=0.110 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
....+...+...+.+.|+.+ +.+++|+++..++ ++.+.|.+.+..+ ++. ..++|+.||+|+|.|+
T Consensus 168 d~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~t-g~~--~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLT-DTT--HTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCC-Cce--EEEECCEEEECCCcch
Confidence 34567777777788888776 9999999999865 2345677766322 222 6899999999999876
No 145
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.97 E-value=5.1e-09 Score=103.66 Aligned_cols=139 Identities=16% Similarity=0.220 Sum_probs=86.2
Q ss_pred CCeEEEECCChHHHHHHHHHhh-----cCCCeEEEecCCCCCcc-------------------cc-----cCCCCceeec
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-----QSIPYVILERENCYASI-------------------WK-----KYSYDRLRLH 57 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-----~~~~v~vie~~~~~gg~-------------------~~-----~~~~~~l~~~ 57 (395)
.+||+|||||++|+++|..|++ .|++|+|||+.+..... |. ......+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5899999999999999999999 99999999987643210 10 0011111110
Q ss_pred ccc---ccc---cCCCC--CCCCCCCCCCCHHHHHHHHHHHHHhcC---CcceeeeeeeEEEeEEeC------CCCcEEE
Q 016088 58 LAK---QFC---QLPHL--PFPSSYPMFVSRAQFIEYLDHYVSHFN---IVPSIRYQRSVESASYDE------ATNMWNV 120 (395)
Q Consensus 58 ~~~---~~~---~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~i~~~~~V~~i~~~~------~~~~~~v 120 (395)
.+. ... .++.. ..........++..+.+.+.+.+.+.+ +++ +++++|+++..++ +...+++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v--~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKV--ERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCE--ECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEE--EeCCEEEEEEecCcccccCCCCCEEE
Confidence 000 000 01000 000111123678888899988888776 566 9999999998764 1234666
Q ss_pred EEeecC--------------------------------------CCCceeeEEEEeCEEEEeecCCC
Q 016088 121 KASNLL--------------------------------------SPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 121 ~~~~~~--------------------------------------~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
++.+.. ..|+. .+++||+||.|+|..|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~--~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEI--ETVHCKYVIGCDGGHS 230 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCE--EEEEEEEEEECCCTTC
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCCce--EEEEeCEEEeccCCCC
Confidence 554310 01222 6799999999999766
No 146
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.97 E-value=3.6e-09 Score=98.19 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
....+...+.+.+++.++.+ +.+++|+++..++ +.|.|.+.+ ..+++|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------g~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN---------GSYTADKLIVSMGAWNS 206 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT---------EEEEEEEEEECCGGGHH
T ss_pred eHHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC---------CEEEeCEEEEecCccHH
Confidence 34678888888888888776 8999999998865 457776643 67999999999997653
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.95 E-value=3.4e-09 Score=98.89 Aligned_cols=60 Identities=10% Similarity=0.006 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
.....+...+.+.+++.++++ +.+++|+++..++ +..+.|.+.+ ..+++|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~---------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDI--IQNCEVTGFIKDG-EKVTGVKTTR---------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS-SBEEEEEETT---------CCEEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEE--EcCCeEEEEEEeC-CEEEEEEeCC---------ceEECCEEEECCchhH
Confidence 345678888888888888776 9999999998764 3346676643 4688999999999755
No 148
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.93 E-value=1.1e-08 Score=99.87 Aligned_cols=145 Identities=17% Similarity=0.162 Sum_probs=86.6
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc-c-ccc-------CC--CCceee---c---ccccc-
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS-I-WKK-------YS--YDRLRL---H---LAKQF- 62 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg-~-~~~-------~~--~~~l~~---~---~~~~~- 62 (395)
|......+||+|||||++|+++|..|++.|.+|+|+||.+..+| + +.. .. .+.... + .....
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 55555568999999999999999999999999999999875532 1 110 00 000000 0 00000
Q ss_pred ----------------ccC--CCCCCCC---------CCCC-----------------CCCHHHHHHHHHHHHHhcCCcc
Q 016088 63 ----------------CQL--PHLPFPS---------SYPM-----------------FVSRAQFIEYLDHYVSHFNIVP 98 (395)
Q Consensus 63 ----------------~~~--~~~~~~~---------~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~ 98 (395)
..+ ...++.. .... -.+...+...+.+.+.+.++++
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i 160 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI 160 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEE
Confidence 000 0001100 0000 0123678888888888888776
Q ss_pred eeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 99 SIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 99 ~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
+.++.|+++..++++..+.|...+... ++. ..++++.||+|||.++.
T Consensus 161 --~~~~~v~~L~~~~~g~v~Gv~~~~~~~-g~~--~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 161 --FSEWYALDLVKNQDGAVVGCTALCIET-GEV--VYFKARATVLATGGAGR 207 (588)
T ss_dssp --EETEEEEEEEECTTSCEEEEEEEETTT-CCE--EEEEEEEEEECCCCCGG
T ss_pred --EeCcEEEEEEECCCCEEEEEEEEEcCC-CeE--EEEEcCEEEECCCCCcc
Confidence 999999999875322334455443111 222 57999999999998664
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.92 E-value=5.7e-09 Score=97.18 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
...+...+.+.+.+.++++ +.+++|+++..++ +.+.|.+.+ ..++||.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~v~v~t~~---------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATL--RAGETVTELVPDA--DGVSVTTDR---------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEESS---------CEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEE--ECCCEEEEEEEcC--CeEEEEECC---------CEEEcCEEEEcCCcCh
Confidence 3567777777777878776 9999999998765 567666533 5789999999999764
No 150
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.92 E-value=1.3e-08 Score=97.70 Aligned_cols=65 Identities=20% Similarity=0.208 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
....+...+.+.+.+.++.+ +.+++|+++..++ +.|.|.+.+... |+. ..+++|.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~-G~~--~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDT-GKK--YSWQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCC-CCE--EEEECCEEEECCChhHH
Confidence 45677888888888888776 8999999998865 677888754211 121 58999999999998763
No 151
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.92 E-value=2.1e-09 Score=104.21 Aligned_cols=62 Identities=8% Similarity=0.099 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
..+..+...+.+.+.+.++.+ +.+ +|+++..+++...+.|.+.++ ..+++|.||+|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG--------RTLEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC--------cEEEeCEEEECCCCchh
Confidence 456788889988888888776 777 899998755322355666553 57999999999997554
No 152
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.91 E-value=1.2e-09 Score=101.93 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~ 42 (395)
.+||+|||||++|+++|..|+++ |.+|+|||+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 48999999999999999999999 9999999987543
No 153
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.89 E-value=1.1e-08 Score=91.14 Aligned_cols=105 Identities=24% Similarity=0.314 Sum_probs=65.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCC-cccccC-CCCceeecccc-ccccCCCCCCC--CCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYA-SIWKKY-SYDRLRLHLAK-QFCQLPHLPFP--SSYPMFVS 79 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~g-g~~~~~-~~~~l~~~~~~-~~~~~~~~~~~--~~~~~~~~ 79 (395)
.+||+|||||++|+++|..|+++ |.+|+|+|+.+..| +.|... .+......... .+..-...++. ..+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 46999999999999999999998 99999999988876 466422 12222222110 00000011110 01111124
Q ss_pred HHHHHHHHHHHHHhc-CCcceeeeeeeEEEeEEeC
Q 016088 80 RAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDE 113 (395)
Q Consensus 80 ~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~i~~~~ 113 (395)
..++...+.+.+.+. ++++ +.+++|+++..++
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i--~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKL--FNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEE--ETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEE--Eecceeeeeeecc
Confidence 567777777767664 7665 8899999998763
No 154
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.87 E-value=1.9e-08 Score=97.92 Aligned_cols=138 Identities=17% Similarity=0.099 Sum_probs=85.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC--CC----Cce----ee-cccccc-------------
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----DRL----RL-HLAKQF------------- 62 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~--~~----~~l----~~-~~~~~~------------- 62 (395)
.+||+|||+|++|+++|..|+++|.+|+|+|+.+..||..... .+ ..+ .. +.+...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 5799999999999999999999999999999998777642211 00 000 00 000000
Q ss_pred --------------------ccCC--------CCCCCCCC-C--CCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEE
Q 016088 63 --------------------CQLP--------HLPFPSSY-P--MFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASY 111 (395)
Q Consensus 63 --------------------~~~~--------~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~ 111 (395)
...+ ....+... + .......+...+.+.+++.++++ +++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i--~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDI--RLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeE--EecCEEEEEEE
Confidence 0000 00000000 0 01236688888988888888776 99999999976
Q ss_pred eCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 112 DEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
++++..+.|...+.. ++. ..+++|.||+|||.++.
T Consensus 284 ~~~g~v~GV~~~~~~--G~~--~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 284 DASGKVTGVLVKGEY--TGY--YVIKADAVVIAAGGFAK 318 (572)
T ss_dssp C--CCEEEEEEEETT--TEE--EEEECSEEEECCCCCTT
T ss_pred CCCCeEEEEEEEeCC--CcE--EEEEcCEEEEeCCCCcc
Confidence 431233445554311 121 57999999999997653
No 155
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.82 E-value=1.2e-08 Score=99.05 Aligned_cols=62 Identities=15% Similarity=0.200 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHhc-CCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 78 VSRAQFIEYLDHYVSHF-NIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~-~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
..+..+.+.+.+.+++. ++++ +++ +|+++..+++...+.|.+.++ ..+++|.||+|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G--------~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG--------RVFDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS--------CEEECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEECCEEEECCCCchh
Confidence 56788999999999888 8776 888 999998754322345666553 67999999999997553
No 156
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.81 E-value=1.1e-08 Score=96.02 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=36.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
+||+|||||++|+++|..|+++|.+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCce
Confidence 589999999999999999999999999999999888743
No 157
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.81 E-value=4.9e-09 Score=92.40 Aligned_cols=45 Identities=20% Similarity=0.324 Sum_probs=40.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYD 52 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~ 52 (395)
+||+||||||+||++|..|+++|++|+|||+.+.+||.+.....+
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~ 47 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD 47 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC
Confidence 789999999999999999999999999999999999876543333
No 158
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.81 E-value=1.8e-08 Score=97.28 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHh-cCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 78 VSRAQFIEYLDHYVSH-FNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
..+..+.+.+.+.+.+ .++++ +++ +|+++..+++.....|.+.++ ..+++|+||.|+|.++.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g--------~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN--------GEISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC--------CEEEcCEEEECCCcchH
Confidence 4678888999988888 78776 777 699998764222335555543 45999999999997654
No 159
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.80 E-value=6.7e-09 Score=100.02 Aligned_cols=63 Identities=17% Similarity=0.175 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016088 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p 151 (395)
..+..+.+.+.+.+.+.++++ +.+ +|+++..+++...+.|++.++ ..+++|.||.|+|.++..
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g--------~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH--------GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS--------CEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC--------CEEEcCEEEECCCcchHH
Confidence 467889999998888888776 888 999998755322355666553 579999999999976543
No 160
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.79 E-value=9.6e-09 Score=96.41 Aligned_cols=39 Identities=26% Similarity=0.471 Sum_probs=36.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
+||+|||||++|+++|..|+++|.+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~ 39 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRF 39 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCcee
Confidence 489999999999999999999999999999999888743
No 161
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.79 E-value=2e-08 Score=94.58 Aligned_cols=39 Identities=28% Similarity=0.314 Sum_probs=36.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
+||+|||||++|+++|..|+++|.+|+|+|+++.+||..
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~ 40 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRA 40 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCee
Confidence 699999999999999999999999999999988888744
No 162
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.76 E-value=3.3e-08 Score=100.68 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCc-EEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 79 SRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNM-WNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 79 ~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
....+...+.+.+++.++.+ +.+++|+++..++ +. +.|.+.+ ..++||.||+|+|.++
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i--~~~t~V~~i~~~~--~~v~~V~t~~---------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTY--RGSTTVTGIEQSG--GRVTGVQTAD---------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETT---------EEEECSEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--ECCceEEEEEEeC--CEEEEEEECC---------cEEECCEEEECCccch
Confidence 45678888888888888776 8899999998765 44 3465543 6799999999999875
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.75 E-value=7.7e-08 Score=91.17 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||++|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|++++.++ +.+.+.+.++ ..+.+|.||+|+| .+|+.+
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~~D~vv~A~G--~~p~~~ 267 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG--------EVLEADRVLVAVG--RRPYTE 267 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC--------eEEEcCEEEECcC--CCcCCC
Confidence 777788888777 9999999998765 4566666543 6789999999999 566554
No 164
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.75 E-value=1e-07 Score=93.17 Aligned_cols=139 Identities=17% Similarity=0.141 Sum_probs=82.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc--------cccc-CC--CCceeec------------cc----
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS--------IWKK-YS--YDRLRLH------------LA---- 59 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg--------~~~~-~~--~~~l~~~------------~~---- 59 (395)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..++ .+.. .. .+..... .+
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 57999999999999999999999999999999764433 1110 00 0000000 00
Q ss_pred -------cc---c--ccCCCCC----------CCCC-CC-------------CCCCHHHHHHHHHHHHHhcCCcceeeee
Q 016088 60 -------KQ---F--CQLPHLP----------FPSS-YP-------------MFVSRAQFIEYLDHYVSHFNIVPSIRYQ 103 (395)
Q Consensus 60 -------~~---~--~~~~~~~----------~~~~-~~-------------~~~~~~~~~~~l~~~~~~~~~~~~i~~~ 103 (395)
.. + +.++... +... .+ .-.+...+...+.+.+.+.++++ +.+
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i--~~~ 175 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSY--FVE 175 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEE--EET
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEE--EEc
Confidence 00 0 0000000 0000 00 00134578888888888778766 999
Q ss_pred eeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCC
Q 016088 104 RSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNP 151 (395)
Q Consensus 104 ~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p 151 (395)
+.|+++..++ +....|...+... ++. ..++++.||+|||.++..
T Consensus 176 ~~v~~Li~~~-g~v~Gv~~~~~~~-G~~--~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 176 YFALDLLMEN-GECRGVIALCIED-GTI--HRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEEET-TEEEEEEEEETTT-CCE--EEEEEEEEEECCCCCGGG
T ss_pred eEEEEEEEEC-CEEEEEEEEEcCC-CcE--EEEEcCeEEECCCccccc
Confidence 9999998754 2223344433111 222 579999999999987643
No 165
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.75 E-value=2.6e-08 Score=96.13 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=34.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg 44 (395)
..+||+|||||++|+++|..|++ |.+|+|+||.+..+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35899999999999999999999 999999999886654
No 166
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.74 E-value=1.5e-08 Score=96.44 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=36.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC------CCeEEEecCCCCCcc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS------IPYVILERENCYASI 45 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~------~~v~vie~~~~~gg~ 45 (395)
.+||+|||||++||++|..|+++| .+|+|+|+.+.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999999888873
No 167
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.73 E-value=9.6e-08 Score=93.34 Aligned_cols=140 Identities=16% Similarity=0.156 Sum_probs=81.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCc--ccccCC----C---Cceee------------ccccc--
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYAS--IWKKYS----Y---DRLRL------------HLAKQ-- 61 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg--~~~~~~----~---~~l~~------------~~~~~-- 61 (395)
.+||+|||||++|+++|..|++.| .+|+|+|+.+..++ .|.... + +.... ..+..
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 589999999999999999999999 99999999764432 111100 0 00000 00000
Q ss_pred --------------cccCCCCCC------CCCCCC----------CCCHHHHHHHHHHHHHhcC-CcceeeeeeeEEEeE
Q 016088 62 --------------FCQLPHLPF------PSSYPM----------FVSRAQFIEYLDHYVSHFN-IVPSIRYQRSVESAS 110 (395)
Q Consensus 62 --------------~~~~~~~~~------~~~~~~----------~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~V~~i~ 110 (395)
.+..+.... ...+.. -.+...+...+.+.+.+.+ +++ +.++.|+++.
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i--~~~~~v~~l~ 162 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQR--FDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEE--EETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEE--EeCCEEEEEE
Confidence 000000000 000000 0124577888888777776 665 9999999998
Q ss_pred EeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 111 YDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
.++ +....+...+... ++. ..++++.||+|||.++...
T Consensus 163 ~~~-g~v~Gv~~~~~~~-G~~--~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 163 VDD-GHVRGLVAMNMME-GTL--VQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp EET-TEEEEEEEEETTT-TEE--EEEECSCEEECCCCCGGGS
T ss_pred EeC-CEEEEEEEEEcCC-CcE--EEEEcCeEEECCCCCcccc
Confidence 764 2222333322111 121 4799999999999876543
No 168
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.72 E-value=8.3e-08 Score=93.37 Aligned_cols=38 Identities=18% Similarity=0.355 Sum_probs=34.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg 44 (395)
.+||+|||||++|+++|..|+++|++|+|+|+.+..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 68999999999999999999999999999999875544
No 169
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.69 E-value=1.8e-07 Score=92.16 Aligned_cols=65 Identities=8% Similarity=0.153 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCC
Q 016088 80 RAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSN 150 (395)
Q Consensus 80 ~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~ 150 (395)
...+...+.+.+.+.++++ +.++.|+++..++ +....|...+... ++. ..++++.||+|||.++.
T Consensus 157 G~~l~~~L~~~a~~~gv~i--~~~~~v~~L~~~~-g~v~Gv~~~~~~~-G~~--~~i~A~~VVlATGG~~~ 221 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSI--QDRKEAIALIHQD-GKCYGAVVRDLVT-GDI--IAYVAKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHHhCCCEE--EECcEEEEEEecC-CEEEEEEEEECCC-CcE--EEEEcCEEEEccCcchh
Confidence 4578888888888888776 9999999998754 2223344432111 222 57999999999998764
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.68 E-value=1.1e-07 Score=87.96 Aligned_cols=101 Identities=16% Similarity=0.081 Sum_probs=79.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------G-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------c-ccCHHHHHH
Confidence 57899999999999999999999999999998773210 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|+++..++ +.+.+.+.++ ..+.+|.||+|+| ..|+.
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g--------~~i~~d~vv~a~G--~~p~~ 245 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG--------EVIPCDLVVSAVG--LRPRT 245 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC--------CEEECCEEEECcC--CCcCH
Confidence 888888888877 9999999998765 5566777654 6789999999999 45543
No 171
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.67 E-value=1.5e-07 Score=92.67 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc------CCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ------SIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~------~~~v~vie~~~~~ 42 (395)
.+||+|||||.+|+++|..|++. |.+|+|+||....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 58999999999999999999998 9999999997643
No 172
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.66 E-value=1.8e-07 Score=88.75 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe-e--cCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-N--LLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~-~--~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~ 155 (395)
+.+.+++.++++ +.+++|++++.++ +.+.+.+. + +.. ..+.+|.||+|+| .+|+...
T Consensus 216 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~i~~D~vv~a~G--~~p~~~~ 275 (464)
T 2eq6_A 216 LRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGGEG------EEVVVDKVLVAVG--RKPRTEG 275 (464)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCCSC------EEEEESEEEECSC--EEESCTT
T ss_pred HHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCCce------eEEEcCEEEECCC--cccCCCC
Confidence 888888888877 9999999998765 45666665 3 311 5899999999999 5666543
No 173
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.62 E-value=2.2e-08 Score=88.68 Aligned_cols=192 Identities=11% Similarity=0.126 Sum_probs=100.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhh-cCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANH-AAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~-g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (395)
..+++|||+|++|+.+|..|++. |.+|+++.+.+. ........ ...+...+..... ..++. .+++.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg~~~~~-~~~~~~~~~~~~~---~~~l~--------~~G~~ 105 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGGGAWLG-GQLFSAMIVRKPA---HLFLD--------EIGVA 105 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCTTTTCC-STTCCCEEEETTT---HHHHH--------HHTCC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCCceecC-CcchHHHHcCcHH---HHHHH--------HcCCC
Confidence 34799999999999999999997 999999998762 11000000 0000000000000 00011 11111
Q ss_pred CCCCCcchhhccCCCceeeCchhhhhhc-CCcEEEecC--ceEEeC--C---eEEec---------CC-----cEEeCcE
Q 016088 265 KPREGPFFMKAAYGKYPVIDAGTCEKIK-SGQIQVLPG--IESIRG--N---EVIFE---------NG-----HSHHFDS 322 (395)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~--v~~~~~--~---~v~~~---------~g-----~~~~~D~ 322 (395)
........ .......+...+.+.+. ..+++++.+ +..+.. + ++.+. +| ..+++|.
T Consensus 106 ~~~~~~~~---~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~ 182 (284)
T 1rp0_A 106 YDEQDTYV---VVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKI 182 (284)
T ss_dssp CEECSSEE---EESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEE
T ss_pred cccCCCEE---EecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCE
Confidence 10000000 00001112223344444 368999887 777642 3 34442 32 5689999
Q ss_pred EEEccCCCCCccccccCCC-------CccCCCCCCCCCC------CCcccCCCCeEEEeccccc--------c--cCccH
Q 016088 323 IVFCTGFKRSTNVWLKGDD-------SMLNDDGIPKQSY------PNHWKGKNGLYCVGLSRKG--------L--YGAAA 379 (395)
Q Consensus 323 vi~atG~~~~~~~~~~~~~-------~~~~~~g~~~~~~------~~~~~~~~~vya~Gd~~~~--------~--~~a~~ 379 (395)
||+|+|..++...+..... .+...+|. .++. ....++.|++|++|+++.. + ..+..
T Consensus 183 VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~-~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~ 261 (284)
T 1rp0_A 183 VVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKAL-DMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMI 261 (284)
T ss_dssp EEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEE-CHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHHH
T ss_pred EEECCCCchHHHHHHHHHhhhccCCCCcCCcCCc-hhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHHH
Confidence 9999998887643322110 11112221 1110 0223466999999998532 2 25667
Q ss_pred HHHHHHHHhhcccCC
Q 016088 380 DAQNIADHINSILSP 394 (395)
Q Consensus 380 ~a~~~a~~i~~~l~~ 394 (395)
++..+|.+|.++|..
T Consensus 262 sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 262 SGQKAGQLALKALGL 276 (284)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHhhh
Confidence 999999999998853
No 174
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=3.4e-07 Score=86.74 Aligned_cols=104 Identities=14% Similarity=0.160 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------S--GFEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4789999999999999999999999999999876321 0 012467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|++++.++ +.+.+.+... +.. ..+.+|.||+|+| .+|+..
T Consensus 217 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~---g~~--~~~~~D~vv~a~G--~~p~~~ 273 (455)
T 1ebd_A 217 IKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEAN---GET--KTIDADYVLVTVG--RRPNTD 273 (455)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEET---TEE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeC---Cce--eEEEcCEEEECcC--CCcccC
Confidence 888888888877 9999999998765 4455655421 111 6799999999999 566543
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.61 E-value=4.1e-07 Score=86.71 Aligned_cols=108 Identities=16% Similarity=0.240 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||..|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------------------------SMDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 47899999999999999999999999999998874321 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++...++.+.+.+.+.+... +.. ..+.+|.||+|+| .+|+..
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~~ 290 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKT-NKQ--ENLEAEVLLVAVG--RRPYIA 290 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTT-TEE--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCC-CCc--eEEECCEEEECCC--CCcCCC
Confidence 888888888877 999999999873122455666652100 111 6799999999999 566654
No 176
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.61 E-value=1.2e-08 Score=94.30 Aligned_cols=120 Identities=17% Similarity=0.116 Sum_probs=74.7
Q ss_pred CeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCC---Ccc--cccCCCC-----cee-ec-ccccc-----ccC--C
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYD-----RLR-LH-LAKQF-----CQL--P 66 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~---gg~--~~~~~~~-----~l~-~~-~~~~~-----~~~--~ 66 (395)
+||+|||||++|+++|..|+++ |++|+|+|+.+.. |.. +..+... .+. -. ..... ..+ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999999 9999999998765 221 1111000 000 00 00000 000 0
Q ss_pred CCCCCC--CC-CCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEE
Q 016088 67 HLPFPS--SY-PMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVV 143 (395)
Q Consensus 67 ~~~~~~--~~-~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVl 143 (395)
...... .. ....++.++.+.+.+.+.+.++++ +++++|+++... ..+++|.||.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~---------------------~~~~ad~vV~ 137 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAI--RFESPLLEHGEL---------------------PLADYDLVVL 137 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEE--ETTCCCCSGGGC---------------------CGGGCSEEEE
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEE--EeCCEeccchhc---------------------ccccCCEEEE
Confidence 000000 00 013567899999999888888766 999999776521 1246799999
Q ss_pred eecCCCC
Q 016088 144 ASGETSN 150 (395)
Q Consensus 144 AtG~~~~ 150 (395)
|+|..|.
T Consensus 138 AdG~~S~ 144 (381)
T 3c4a_A 138 ANGVNHK 144 (381)
T ss_dssp CCGGGGG
T ss_pred CCCCCch
Confidence 9997665
No 177
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.60 E-value=1e-07 Score=90.13 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCeEEEecC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERE 39 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~ 39 (395)
++||+|||||++|+++|..|+++| .+|+|+|+.
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 579999999999999999999999 999999993
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.60 E-value=1.7e-07 Score=88.66 Aligned_cols=102 Identities=20% Similarity=0.254 Sum_probs=78.0
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..++++|||+|+.|+.+|..|.+.|.+|+++|+.+.+... ....++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHH
Confidence 3579999999999999999999999999999987732100 01246778
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
.+.+.+++.++++ +.+++|++++.+. ..+.+.+. + ..+.+|.||+|+| .+|+.+
T Consensus 196 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~-~--------~~i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 196 VLTEEMEANNITI--ATGETVERYEGDG--RVQKVVTD-K--------NAYDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHHTTTEEE--EESCCEEEEECSS--BCCEEEES-S--------CEEECSEEEECSC--EEESCG
T ss_pred HHHHHHHhCCCEE--EcCCEEEEEEccC--cEEEEEEC-C--------CEEECCEEEECcC--CCCChH
Confidence 8888888888776 9999999998542 33345542 2 6789999999999 566654
No 179
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.59 E-value=1.7e-07 Score=85.65 Aligned_cols=45 Identities=29% Similarity=0.389 Sum_probs=41.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecC-CCCCcccccC
Q 016088 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERE-NCYASIWKKY 49 (395)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~-~~~gg~~~~~ 49 (395)
...+||+|||||++|+++|..|.++|++|+|+|++ +.+||.|...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~ 87 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTF 87 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeee
Confidence 34689999999999999999999999999999999 9999987743
No 180
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.58 E-value=1.7e-07 Score=89.32 Aligned_cols=39 Identities=28% Similarity=0.367 Sum_probs=36.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC--CeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSI--PYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~~~gg~~ 46 (395)
+||+|||||++||++|..|+++|. +|+|+|+++..||..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 699999999999999999999999 999999999888743
No 181
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.58 E-value=2.8e-07 Score=87.08 Aligned_cols=102 Identities=14% Similarity=0.067 Sum_probs=79.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||..|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PS--FDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hh--hhHHHHHH
Confidence 4689999999999999999999999999999876321 00 11356777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|++++.++ ++.+.+.+.++ ..+.+|.||+|+| .+|+..
T Consensus 214 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~i~~D~vv~a~G--~~p~~~ 268 (450)
T 1ges_A 214 LVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG--------RSETVDCLIWAIG--REPAND 268 (450)
T ss_dssp HHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC--------cEEEcCEEEECCC--CCcCCC
Confidence 777788888877 9999999998754 23466777654 6789999999999 566654
No 182
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.58 E-value=1.1e-07 Score=89.49 Aligned_cols=104 Identities=23% Similarity=0.341 Sum_probs=72.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc--CeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g--~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (395)
.|+|+|||+|+.|+.+|..|.+.+ .+||++.+++.+...+... ........
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~---~v~~g~~~------------------------ 54 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP---HLAMGWRK------------------------ 54 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH---HHHHTCSC------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHH---HHhcCCCC------------------------
Confidence 378999999999999999999876 5799999988433321111 01111000
Q ss_pred CCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC--eEEecCCcEEeCcEEEEccCCCCC
Q 016088 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRS 332 (395)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~ 332 (395)
...+...+.+.+++.+++++.+ ++.++.+ .|++++|+++++|.+|+|||.++.
T Consensus 55 ----------------~~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 55 ----------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ----------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred ----------------HHHhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 0001111234456678999988 9999865 599999999999999999998754
No 183
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.55 E-value=3.7e-07 Score=86.61 Aligned_cols=101 Identities=18% Similarity=0.092 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||..|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQ--FDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876321 00 12356677
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeE-EEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|++++.++ +.+.|++.++ . .+.+|.||+|+| .+|+..
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G--------~~~i~~D~vv~a~G--~~p~~~ 267 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG--------TRLEGFDSVIWAVG--RAPNTR 267 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC--------CEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC--------cEEEEcCEEEECCC--CCcCCC
Confidence 777788888777 9999999998765 3466777654 5 799999999999 566653
No 184
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.55 E-value=5.1e-07 Score=86.78 Aligned_cols=101 Identities=12% Similarity=-0.000 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||+.|+..|..+.+.|.+|+|+++...+ + ....++.+.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L--------------------------------~--~~D~ei~~~ 268 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL--------------------------------R--GFDQQCAVK 268 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc--------------------------------c--ccchhHHHH
Confidence 468999999999999999999999999999875421 1 112578888
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~ 155 (395)
+...+++.++.+ +.+..+..+...+ +...|.+.++ ..+.+|.|++|+| -+|+...
T Consensus 269 l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~--------~~~~~D~vLvAvG--R~Pnt~~ 323 (542)
T 4b1b_A 269 VKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK--------TSELYDTVLYAIG--RKGDIDG 323 (542)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECSC--EEESCGG
T ss_pred HHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC--------CeEEEEEEEEccc--ccCCccc
Confidence 888888889877 9999999998876 6666766654 6778999999999 5776543
No 185
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.54 E-value=6e-08 Score=93.40 Aligned_cols=47 Identities=26% Similarity=0.502 Sum_probs=39.7
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCCCCCcccc
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWK 47 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~~~gg~~~ 47 (395)
|+.....+||+|||||++||+||..|+++ |++|+|+|+++.+||..+
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCee
Confidence 44444468999999999999999999985 999999999999999654
No 186
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.52 E-value=8.5e-07 Score=87.45 Aligned_cols=35 Identities=20% Similarity=0.376 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHh---h-cCCCeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLS---L-QSIPYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~---~-~~~~v~vie~~~~ 41 (395)
.+||+|||||++|+++|..|+ + .|.+|+|+||.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 589999999999999999999 6 8999999999874
No 187
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.51 E-value=7.5e-07 Score=83.29 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA--------------------------------RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh--------------------------------hhcCHHHHHH
Confidence 46899999999999999999999999999998773210 0123577888
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ ++++.|+++..++ .....|.+.++ ..+.||.||+|+| ..|+.
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG--------~~i~aD~Vv~a~G--~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG--------SVIPADIVIVGIG--IVPCV 253 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS--------CEEECSEEEECSC--CEESC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECCC--CccCh
Confidence 888888889887 9999999998754 22335677665 6899999999999 55654
No 188
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.51 E-value=1.4e-06 Score=83.37 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=81.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||..|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------cCCHHHHHH
Confidence 46899999999999999999999999999998773210 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ +...+.+.+... ++. ..+.+|.||+|+| .+|+..
T Consensus 245 l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~Vi~a~G--~~p~~~ 303 (491)
T 3urh_A 245 LQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKG-GEA--TTLDAEVVLIATG--RKPSTD 303 (491)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTS-CCC--EEEEESEEEECCC--CEECCT
T ss_pred HHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCC-Cce--EEEEcCEEEEeeC--CccCCC
Confidence 888888888877 9999999998765 556676664211 111 6899999999999 566654
No 189
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.51 E-value=8.3e-07 Score=88.89 Aligned_cols=39 Identities=38% Similarity=0.533 Sum_probs=36.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYAS 44 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg 44 (395)
..+||+|||||++|+++|..|++.|++|+|+|+.+..||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 358999999999999999999999999999999888877
No 190
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.51 E-value=5.9e-07 Score=85.37 Aligned_cols=98 Identities=13% Similarity=0.133 Sum_probs=78.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 4689999999999999999999999999999877321 1 12467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|+++..+. +.+.+.+.+ ..+.+|.||+|+| ..|+.
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~---------~~i~aD~Vv~a~G--~~p~~ 273 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH---------GELRADKLLVATG--RTPNT 273 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT---------EEEEESEEEECSC--EEESC
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC---------cEEEcCEEEECCC--CCcCC
Confidence 888888888877 9999999998754 556666542 7899999999999 45554
No 191
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.50 E-value=8.9e-07 Score=84.85 Aligned_cols=101 Identities=17% Similarity=0.097 Sum_probs=79.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------R--KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------c--ccchhhHHH
Confidence 4689999999999999999999999999999877321 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEE-EEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEY-YSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|++++.++ ++.+.+.+.++ .. +.+|.||+|+| .+|+.
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g--------~~~~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVS-DKNLSIHLSDG--------RIYEHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS-TTCEEEEETTS--------CEEEEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC-CceEEEEECCC--------cEEEECCEEEECCC--CCcCC
Confidence 888888888877 9999999998754 23466776654 44 89999999999 56665
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.49 E-value=7.4e-07 Score=84.60 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------P--NEDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe-ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ +...+.+. ++ +. ..+.+|.||+|+| .+|+..
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g----~~--~~~~~D~vv~a~G--~~p~~~ 274 (464)
T 2a8x_A 218 IEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDG----VA--QELKAEKVLQAIG--FAPNVE 274 (464)
T ss_dssp HHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSS----CE--EEEEESEEEECSC--EEECCS
T ss_pred HHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCC----ce--EEEEcCEEEECCC--CCccCC
Confidence 888888888877 9999999998754 44556654 33 21 6789999999999 566644
No 193
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.49 E-value=1.4e-06 Score=82.95 Aligned_cols=105 Identities=14% Similarity=0.167 Sum_probs=79.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG--------------------------------VGIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC--------------------------------SSCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC--------------------------------cccCHHHHHH
Confidence 46899999999999999999999999999998773210 0012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEee---cCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN---LLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~---~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ .+.+.+...+ +.+ ..+.+|.||+|+| .+|+..
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~------~~i~~D~vv~a~G--~~p~~~ 285 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS-DGKIDVSIEAASGGKA------EVITCDVLLVCIG--RRPFTK 285 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT-TSCEEEEEEETTSCCC------EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC-CceEEEEEEecCCCCc------eEEEcCEEEECcC--CCcCCC
Confidence 888888888877 9999999998754 2225566432 222 6899999999999 566543
No 194
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=6.9e-07 Score=84.97 Aligned_cols=103 Identities=14% Similarity=0.206 Sum_probs=79.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHH
Confidence 4789999999999999999999999999999877321 0 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe---ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS---NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~---~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ +.+.+.+. ++.. ..+.+|.||+|+| .+|+..
T Consensus 224 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g~~------~~~~~D~vv~a~G--~~p~~~ 282 (470)
T 1dxl_A 224 FQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGGEQ------TIIEADVVLVSAG--RTPFTS 282 (470)
T ss_dssp HHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSCCC------EEEEESEEECCCC--EEECCT
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCCcc------eEEECCEEEECCC--CCcCCC
Confidence 888888888887 9999999998654 44556654 2222 6799999999999 556543
No 195
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.48 E-value=3.9e-07 Score=86.32 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=76.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------P--TYDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999887321 0 012466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~ 155 (395)
+.+.+++.++++ +.+++|++++. . + +.+...++.. ..+.+|.||+|+| .+|+.+.
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G~~------~~i~~D~vv~a~G--~~p~~~~ 272 (458)
T 1lvl_A 218 VAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKGGQ------LRLEADRVLVAVG--RRPRTKG 272 (458)
T ss_dssp HHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSSCC------CEECCSCEEECCC--EEECCSS
T ss_pred HHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCCce------EEEECCEEEECcC--CCcCCCC
Confidence 777778888877 99999999975 2 3 4444222211 5789999999999 5666543
No 196
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.47 E-value=9.3e-07 Score=84.01 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=78.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------P--TLDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012466777
Q ss_pred HHHHH-HhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYV-SHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~-~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+ ++.++++ +.+++|++++.++ +.+.+.+. ++ +. ..+.+|.||+|+| .+|+..
T Consensus 221 l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~g----~~--~~i~~D~vv~a~G--~~p~~~ 279 (468)
T 2qae_A 221 LVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGKNG----KR--ETVTCEALLVSVG--RRPFTG 279 (468)
T ss_dssp HHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC-------E--EEEEESEEEECSC--EEECCT
T ss_pred HHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcCCC----ce--EEEECCEEEECCC--cccCCC
Confidence 88877 8888877 9999999998754 44556654 32 11 5789999999999 566543
No 197
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.46 E-value=7.9e-07 Score=82.81 Aligned_cols=102 Identities=20% Similarity=0.191 Sum_probs=79.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. .....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~--------------------------------~~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA--------------------------------RVVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh--------------------------------hccCHHHHHH
Confidence 46899999999999999999999999999998773210 0112567788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ ++++.|+++..++ .....|.+.++ ..+.+|.||+|+| ..|+.
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG--------~~i~aD~Vv~a~G--~~p~~ 243 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG--------NTLPCDLVVVGVG--VIPNV 243 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS--------CEEECSEEEECCC--EEECC
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC--------CEEEcCEEEECcC--CccCH
Confidence 888888889887 9999999998764 22334666664 6889999999999 55553
No 198
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.46 E-value=4.2e-07 Score=84.79 Aligned_cols=101 Identities=18% Similarity=0.210 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999987732100 011466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ ++++.|+++..++ ....|.+.++ ..+.+|.||+|+| ..|+.
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg--------~~i~aD~Vv~a~G--~~p~~ 243 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG--------RSFVADSALICVG--AEPAD 243 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC--------CEEEcCEEEEeeC--CeecH
Confidence 888888888877 9999999998643 4456777665 7889999999999 55553
No 199
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.46 E-value=1.5e-06 Score=82.23 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------PK-YFDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------cc-cCCHHHHHH
Confidence 4689999999999999999999999999999877321 00 012567788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTPD 155 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~~ 155 (395)
+.+.+++.++++ +.+++|+++...+ +.+.|.+.+ ..+.+|.||+|+| .+|+...
T Consensus 195 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~---------g~i~aD~Vv~A~G--~~p~~~~ 248 (452)
T 3oc4_A 195 VQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE---------QEISCDSGIFALN--LHPQLAY 248 (452)
T ss_dssp HHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS---------CEEEESEEEECSC--CBCCCSS
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC---------CEEEeCEEEECcC--CCCChHH
Confidence 888888888777 9999999998654 455566533 5789999999999 5666543
No 200
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.46 E-value=5.9e-07 Score=85.71 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=78.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------Q--GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|++++.++ +...+.+.+.. ++. ..+.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~--~~g--~~~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGAN--APK--EPQRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSS--CCS--SCEEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccC--CCc--eEEEcCEEEECcC--CCcCC
Confidence 888888888776 9999999998765 44556665410 000 4678999999999 56654
No 201
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.46 E-value=1.1e-06 Score=83.97 Aligned_cols=102 Identities=12% Similarity=0.038 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~---~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
..+++|||+|..|+.+|..|.+. |.+|+++++.+.+. +. ...++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------RG--FDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------TT--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------cc--cCHHH
Confidence 46899999999999999999999 99999999887321 00 12467
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
.+.+.+.+++.++++ +.+++|+++..++ ++.+.|.+.++ ..+.+|.||+|+| .+|+..
T Consensus 234 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~~ 291 (490)
T 1fec_A 234 RKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG--------AEADYDVVMLAIG--RVPRSQ 291 (490)
T ss_dssp HHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC--------cEEEcCEEEEccC--CCcCcc
Confidence 778888888888777 9999999998754 23466777654 5789999999999 566643
No 202
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.45 E-value=8.1e-07 Score=82.80 Aligned_cols=97 Identities=21% Similarity=0.285 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-------------------------------R-AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c-ccCHHHHHH
Confidence 47899999999999999999999999999998873210 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|++++ + + .|++.++ ..+.+|.||+|+| .+|+.
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~--~--~--~v~~~~g--------~~i~~D~vi~a~G--~~p~~ 241 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV--D--G--VVLLDDG--------TRIAADMVVVGIG--VLAND 241 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE--T--T--EEEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE--C--C--EEEECCC--------CEEEcCEEEECcC--CCccH
Confidence 888888888877 9999999998 3 3 4666654 6789999999999 55553
No 203
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.45 E-value=4.3e-07 Score=85.49 Aligned_cols=105 Identities=17% Similarity=0.300 Sum_probs=74.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (395)
++++|||+|+.|+.+|..|++ .+.+|+++.+++......... ........
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~---~~~~g~~~------------------------ 57 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNP---WVGVGWKE------------------------ 57 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHH---HHHHTSSC------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCcc---ccccCccC------------------------
Confidence 689999999999999999999 788999999987432221110 00000000
Q ss_pred CCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC--eEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
...+...+.+.+++.+++++.+ ++.++.+ .|.+++|+++.+|.||+|||.+++.+
T Consensus 58 ----------------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 58 ----------------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp ----------------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGG
T ss_pred ----------------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcc
Confidence 0111122345566678888877 8888875 58889999999999999999988764
No 204
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.44 E-value=1.6e-06 Score=82.77 Aligned_cols=104 Identities=17% Similarity=0.169 Sum_probs=77.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN---------------------------------LQDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT---------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------cCCHHHHHH
Confidence 47899999999999999999999999999998874210 012466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++. +++ +.++.|+++..++ +...+...+.. |+. ..+.+|.||+|+| .+|+..
T Consensus 221 l~~~l~~~-V~i--~~~~~v~~i~~~~--~~v~v~~~~~~--G~~--~~i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 221 AEKTFNEE-FYF--DAKARVISTIEKE--DAVEVIYFDKS--GQK--TTESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHTT-SEE--ETTCEEEEEEECS--SSEEEEEECTT--CCE--EEEEESEEEECSC--CEESCS
T ss_pred HHHHHhhC-cEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cce--EEEECCEEEEeeC--CccCCC
Confidence 77777665 655 8999999998765 45556664211 222 6899999999999 566654
No 205
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.44 E-value=1.7e-07 Score=88.61 Aligned_cols=45 Identities=16% Similarity=0.289 Sum_probs=41.0
Q ss_pred cCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc
Q 016088 4 QAAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (395)
Q Consensus 4 ~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~ 48 (395)
....+||+|||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 334689999999999999999999999999999999999997665
No 206
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.44 E-value=1.3e-06 Score=83.52 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc---CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~---~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (395)
..+++|||+|..|+.+|..|.+. |.+|+++++.+.+. + ....++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------R--GFDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------T--TSCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------c--ccCHHH
Confidence 46899999999999999999999 99999999877321 0 012467
Q ss_pred HHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 84 IEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 84 ~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+.+.+++.++++ +.+++|+++..++ ++...|++.++ ..+.+|.||+|+| .+|+.
T Consensus 238 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G--------~~i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG--------KTLDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS--------CEEEESEEEECSC--EEECC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC--------cEEEcCEEEECCC--Ccccc
Confidence 777888888888877 9999999998754 23466777654 6789999999999 56654
No 207
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.44 E-value=1e-06 Score=82.76 Aligned_cols=102 Identities=14% Similarity=0.178 Sum_probs=77.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. +. ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-------------------------------ER-VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------TT-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-hhhHHHHHH
Confidence 4689999999999999999999999999999876321 00 012466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEe-CCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYD-EATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
+.+.+++.++++ +.+++|+++... +++....|.+.++ ..+.+|.||+|+| .+|+
T Consensus 197 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~v~~v~~~~G--------~~i~~D~Vv~a~G--~~p~ 251 (431)
T 1q1r_A 197 YEHLHREAGVDI--RTGTQVCGFEMSTDQQKVTAVLCEDG--------TRLPADLVIAGIG--LIPN 251 (431)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECTTTCCEEEEEETTS--------CEEECSEEEECCC--EEEC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEeccCCCcEEEEEeCCC--------CEEEcCEEEECCC--CCcC
Confidence 777888888877 999999999862 2122335666554 6789999999999 4554
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.43 E-value=4.3e-07 Score=83.85 Aligned_cols=108 Identities=15% Similarity=0.236 Sum_probs=73.4
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (395)
+..+|+|||+|+.|+.+|..|...+.+|+++.+++...+.+ ..+...+....+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~--~~l~~~l~g~~~------------------------- 60 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYR--PRLNEIIAKNKS------------------------- 60 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCG--GGHHHHHHSCCC-------------------------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCccc--ChhhHHHcCCCC-------------------------
Confidence 46689999999999999999977788999999887321111 111111111000
Q ss_pred CCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC--eEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 265 KPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
...+.....+.+++.+++++.+ ++.++.+ .|.+++|+++.+|.+|+|||.+|..+
T Consensus 61 ---------------~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 61 ---------------IDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp ---------------GGGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred ---------------HHHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 0001111234455678999887 8888765 58889999999999999999988654
No 209
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.42 E-value=6.9e-07 Score=85.17 Aligned_cols=100 Identities=20% Similarity=0.295 Sum_probs=76.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
...+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHH
Confidence 357899999999999999999999999999998763210 01246777
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+.+++.++++ +.+++|+++..+. +.+.+.+.+ ..+.+|.||+|+| ..|+.
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~---------~~i~~D~vi~a~G--~~p~~ 284 (480)
T 3cgb_A 232 YIYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK---------GTYKADLVLVSVG--VKPNT 284 (480)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT---------EEEECSEEEECSC--EEESC
T ss_pred HHHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC---------CEEEcCEEEECcC--CCcCh
Confidence 8888888888877 9999999998642 333444432 7899999999999 45553
No 210
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.42 E-value=2.9e-07 Score=86.32 Aligned_cols=47 Identities=32% Similarity=0.496 Sum_probs=40.4
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcC-CCeEEEecCCCCCccccc
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~~~~gg~~~~ 48 (395)
|+.. ..+||+|||||++|+++|..|+++| .+|+|+|+++.+||.+..
T Consensus 1 M~~~-~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 1 MSIS-KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp -CCC-TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCC-CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 5532 3689999999999999999999999 899999999999986554
No 211
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.42 E-value=1.5e-06 Score=83.77 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=78.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------L--IKDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T--CCSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------c--cccHHHHHHH
Confidence 789999999999999999999999999999877321 0 0124677888
Q ss_pred HHHHHhcCCcceeeeeeeEEEeEEeCCCCc---EEEEEeecCCCCceeeE-EEEeCEEEEeecCCCCCCC
Q 016088 88 DHYVSHFNIVPSIRYQRSVESASYDEATNM---WNVKASNLLSPGRVIEE-YYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~---~~v~~~~~~~~~~~~~~-~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+++.++++ +.+++|+++..++ ++. +.|.+.++ . .+.+|.||+|+| .+|+.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~-~~~v~~~~v~~~~G--------~~~i~aD~Vv~A~G--~~p~~ 318 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDA-NGRVQAVVAMTPNG--------EMRIETDFVFLGLG--EQPRS 318 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECT-TSBEEEEEEEETTE--------EEEEECSCEEECCC--CEECC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcC-CCceEEEEEEECCC--------cEEEEcCEEEECcC--CccCC
Confidence 88888888877 9999999998754 232 56666553 4 899999999999 55554
No 212
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=5.2e-07 Score=82.84 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=73.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
.+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999877321 0 124677788
Q ss_pred HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+++.++++ +.+++|++++. .. +++.++ . +.+|.||+|+| ..|+.
T Consensus 190 ~~~l~~~gV~i--~~~~~v~~i~~----~~--v~~~~g--------~-i~~D~vi~a~G--~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKF--FLNSELLEANE----EG--VLTNSG--------F-IEGKVKICAIG--IVPNV 236 (367)
T ss_dssp HHHHHHTTEEE--ECSCCEEEECS----SE--EEETTE--------E-EECSCEEEECC--EEECC
T ss_pred HHHHHHCCCEE--EcCCEEEEEEe----eE--EEECCC--------E-EEcCEEEECcC--CCcCH
Confidence 88888888777 99999998872 22 666543 6 99999999999 55654
No 213
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.41 E-value=1.2e-06 Score=83.85 Aligned_cols=100 Identities=16% Similarity=0.173 Sum_probs=78.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999877321 00 12467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|+++..+. +.+.+.+.++ ..+.+|.||+|+| .+|+.
T Consensus 229 l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 281 (499)
T 1xdi_A 229 LEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG--------RTVEGSHALMTIG--SVPNT 281 (499)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC--------cEEEcCEEEECCC--CCcCC
Confidence 888888889877 9999999998754 4455655443 6799999999999 45554
No 214
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.41 E-value=1.3e-06 Score=83.13 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=79.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (395)
..+++|||+|..|+.+|..|.+. |.+|+++++.+.+. +. ....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------PG-FTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------TT-TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------cc-ccCHHHHH
Confidence 46899999999999999999999 99999999876321 00 01246778
Q ss_pred HHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 86 YLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 86 ~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+.+++.++++ +.+++|+++..++ +.+.+.+.++ ..+.+|.||+|+| ..|+.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g--------~~i~aD~Vv~a~G--~~p~~ 260 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK--------RTLDADLVILAAG--VSPNT 260 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC--------CEEEcCEEEECCC--CCcCH
Confidence 8888888888877 9999999998744 5666776654 6899999999999 45553
No 215
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.41 E-value=1.5e-06 Score=82.15 Aligned_cols=101 Identities=13% Similarity=0.090 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-------------------------------K-YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-------------------------------h-hhhhhHHHH
Confidence 46899999999999999999999999999998763210 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEE-EEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWN-VKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++...+ +... +.+ ++ ..+.+|.||+|+| .+|+..
T Consensus 197 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~-~g--------~~i~~D~vv~a~G--~~p~~~ 250 (452)
T 2cdu_A 197 LAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTL-DG--------KEIKSDIAILCIG--FRPNTE 250 (452)
T ss_dssp HHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEET-TS--------CEEEESEEEECCC--EEECCG
T ss_pred HHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEe-CC--------CEEECCEEEECcC--CCCCHH
Confidence 888888889887 9999999998643 4433 333 32 6789999999999 566543
No 216
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.40 E-value=2.4e-07 Score=86.14 Aligned_cols=49 Identities=24% Similarity=0.288 Sum_probs=41.5
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCCCCCcccccC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCYASIWKKY 49 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~~~gg~~~~~ 49 (395)
|.....++||+|||||++|+++|..|++. |.+|+|+|+++.+||.+...
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~ 50 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEE
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeec
Confidence 44444468999999999999999999999 99999999999999987654
No 217
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=1.9e-06 Score=77.35 Aligned_cols=105 Identities=22% Similarity=0.279 Sum_probs=75.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+ .....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----------------------------------~~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF-----------------------------------RAEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-----------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc-----------------------------------ccCHHHHHH
Confidence 468999999999999999999999999999987621 012355666
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +++++|+++..+. ++...|.+.+...+++. ..+.+|.||+|+| .+|+.
T Consensus 190 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~--~~i~~D~vv~a~G--~~p~~ 249 (320)
T 1trb_A 190 LMDKVENGNIIL--HTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNI--ESLDVAGLFVAIG--HSPNT 249 (320)
T ss_dssp HHHHHHTSSEEE--ECSCEEEEEEECS-SSEEEEEEECCTTCCCC--EEEECSEEEECSC--EEESC
T ss_pred HHHhcccCCeEE--EcCceeEEEEcCC-CceEEEEEEeccCCCce--EEEEcCEEEEEeC--CCCCh
Confidence 666677778776 9999999998754 22233555541000111 6899999999999 55554
No 218
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.40 E-value=1.4e-06 Score=83.17 Aligned_cols=101 Identities=15% Similarity=0.221 Sum_probs=76.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|++.|.+|+++++.+.+.. . ....++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA-------------------------------G-YYDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh-------------------------------h-HHHHHHHHH
Confidence 57899999999999999999999999999998773210 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..+. ....+.+ ++ ..+.+|.||+|+| .+|+.+
T Consensus 242 l~~~l~~~GV~i--~~~~~v~~i~~~~--~v~~v~~-~g--------~~i~~D~Vi~a~G--~~p~~~ 294 (490)
T 2bc0_A 242 MAKNMEEHGIQL--AFGETVKEVAGNG--KVEKIIT-DK--------NEYDVDMVILAVG--FRPNTT 294 (490)
T ss_dssp HHHHHHTTTCEE--EETCCEEEEECSS--SCCEEEE-SS--------CEEECSEEEECCC--EEECCG
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEcCC--cEEEEEE-CC--------cEEECCEEEECCC--CCcChH
Confidence 888888888877 9999999998522 2223444 32 6789999999999 566643
No 219
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.40 E-value=4.1e-06 Score=79.90 Aligned_cols=105 Identities=18% Similarity=0.086 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++...+ + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVL--------------------------------R--GFDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC--------------------------------c--ccCHHHHHH
Confidence 468999999999999999999999999999874311 0 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.++.|+++...+ ++...|.+.++.. ++. ..+.+|.||+|+| .+|+.
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-~~~--~~~~~D~vi~a~G--~~p~~ 291 (483)
T 3dgh_A 233 VAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVET-GEE--SEDVYDTVLWAIG--RKGLV 291 (483)
T ss_dssp HHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTT-CCE--EEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCC-Cce--eEEEcCEEEECcc--cccCc
Confidence 888888889887 9999999998754 2456677766532 122 5899999999999 45554
No 220
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.38 E-value=7.1e-07 Score=83.02 Aligned_cols=106 Identities=20% Similarity=0.228 Sum_probs=72.4
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhc--CeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYG 262 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g--~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (395)
.+|+|+|||+|+.|+.+|..|.+.+ .+|+++.+++.+..+..... ......+ .
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~---v~~g~~~------------------~---- 55 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNE---VIGGDRE------------------L---- 55 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHH---HHHTSSC------------------G----
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHH---HhcCCCC------------------H----
Confidence 3799999999999999999998876 47999998874333221110 0000000 0
Q ss_pred CCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC--eEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 263 IHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
+ .+... .+.+.+.+++++.+ ++.++.+ .+.+.+|.++++|.+|+|||.+++.+
T Consensus 56 ----~--------------~~~~~-~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 56 ----A--------------SLRVG-YDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp ----G--------------GGEEC-SHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGG
T ss_pred ----H--------------HHhhC-HHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccC
Confidence 0 00000 12344568999888 8999865 58889999999999999999998764
No 221
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.38 E-value=1.8e-06 Score=82.26 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=78.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------R--KFDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.+++|+++..+++.....|.+.++ + ..+.+|.||+|+| .+|+.
T Consensus 232 l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G----~---~~i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS----K---SIDDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS----C---EEEEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC----c---EEEEcCEEEECCC--CCCcc
Confidence 777788888877 9999999998754221355666542 1 4789999999999 56664
No 222
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.38 E-value=2.9e-06 Score=80.42 Aligned_cols=132 Identities=16% Similarity=0.133 Sum_probs=72.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCCCCcccccCCCCceeec--cccc---cccCCCC--------CCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLH--LAKQ---FCQLPHL--------PFP 71 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~~gg~~~~~~~~~l~~~--~~~~---~~~~~~~--------~~~ 71 (395)
..+|+|||+|..|+.+|..|.+. +.+|+++++.+.+-- .....+... .+.. +..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 57899999999999999999998 889999998874310 000000000 0000 0000000 000
Q ss_pred CCCCCCCCH---HHHHHHH-HHHHH-hcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeec
Q 016088 72 SSYPMFVSR---AQFIEYL-DHYVS-HFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASG 146 (395)
Q Consensus 72 ~~~~~~~~~---~~~~~~l-~~~~~-~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG 146 (395)
..+.. ... .++.+.+ .+.+. ..++.+ +.++.|+++..++ +.+.|.+.+... |+. .++.+|.||+|||
T Consensus 303 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i--~~~~~v~~v~~~~--~~~~v~~~~~~~-g~~--~~~~~D~Vv~AtG 374 (463)
T 3s5w_A 303 TNYSV-VDTDLIERIYGVFYRQKVSGIPRHAF--RCMTTVERATATA--QGIELALRDAGS-GEL--SVETYDAVILATG 374 (463)
T ss_dssp GTSSC-BCHHHHHHHHHHHHHHHHHCCCCSEE--ETTEEEEEEEEET--TEEEEEEEETTT-CCE--EEEEESEEEECCC
T ss_pred cCCCc-CCHHHHHHHHHHHHHHHhcCCCCeEE--EeCCEEEEEEecC--CEEEEEEEEcCC-CCe--EEEECCEEEEeeC
Confidence 00000 011 1111111 11111 135544 9999999998865 678888874322 222 6799999999999
Q ss_pred CCCCCC
Q 016088 147 ETSNPF 152 (395)
Q Consensus 147 ~~~~p~ 152 (395)
.+|+
T Consensus 375 --~~p~ 378 (463)
T 3s5w_A 375 --YERQ 378 (463)
T ss_dssp --EECC
T ss_pred --CCCC
Confidence 5555
No 223
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.37 E-value=5.2e-06 Score=79.27 Aligned_cols=106 Identities=16% Similarity=0.031 Sum_probs=79.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++...+ + ....++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL--------------------------------R--GFDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc--------------------------------c--cCCHHHHHH
Confidence 457999999999999999999999999999875411 0 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.++.+.++...+ ++...+...+..+ ++. ..+.+|.||+|+| .+|+..
T Consensus 231 l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~~~~D~vi~a~G--~~p~~~ 290 (488)
T 3dgz_A 231 VTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHAS-GKE--DTGTFDTVLWAIG--RVPETR 290 (488)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTT-TEE--EEEEESEEEECSC--EEESCG
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCC-Cee--EEEECCEEEEccc--CCcccC
Confidence 888888888877 9999999998754 3555676665321 121 4689999999999 566543
No 224
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.37 E-value=1.8e-06 Score=82.33 Aligned_cols=101 Identities=21% Similarity=0.237 Sum_probs=80.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..+.+.|.+|+++++.+.+. +. ...++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~--~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RN--FDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------cc--cCHHHHHH
Confidence 4689999999999999999999999999999876321 00 12467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ +.+.|.+.++ ..+.+|.||+|+| ..|+..
T Consensus 238 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g--------~~i~aD~Vi~A~G--~~p~~~ 291 (484)
T 3o0h_A 238 LNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG--------QTICADRVMLATG--RVPNTT 291 (484)
T ss_dssp HHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS--------CEEEESEEEECCC--EEECCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC--------cEEEcCEEEEeeC--CCcCCC
Confidence 777788888877 9999999998765 5567777654 6889999999999 555544
No 225
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.36 E-value=3.7e-06 Score=80.02 Aligned_cols=104 Identities=18% Similarity=0.198 Sum_probs=80.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999877321 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.+++|+++..++ +...+...++. ++ ..+.+|.||+|+| .+|+..
T Consensus 227 l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~--g~---~~~~~D~vi~a~G--~~p~~~ 283 (476)
T 3lad_A 227 AQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAE--GE---KSQAFDKLIVAVG--RRPVTT 283 (476)
T ss_dssp HHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSS--EE---EEEEESEEEECSC--EEECCT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCC--Cc---EEEECCEEEEeeC--CcccCC
Confidence 888888888776 9999999998765 45556665432 11 6789999999999 566554
No 226
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.34 E-value=2.4e-06 Score=83.27 Aligned_cols=102 Identities=20% Similarity=0.231 Sum_probs=78.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHH
Confidence 4689999999999999999999999999999876321 0 112467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeC-----------------CCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
+.+.+++.++++ +.++.|+++..+. ..+.+.+...++ ..+.+|.||+|+| .
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--------~~i~~D~vi~a~G--~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG--------ELLETDLLIMAIG--V 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS--------CEEEESEEEECSC--E
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC--------CEEEcCEEEECcC--C
Confidence 888888888877 9999999998731 135556666543 6889999999999 4
Q ss_pred CCCC
Q 016088 150 NPFT 153 (395)
Q Consensus 150 ~p~~ 153 (395)
.|+.
T Consensus 266 ~p~~ 269 (565)
T 3ntd_A 266 RPET 269 (565)
T ss_dssp EECC
T ss_pred ccch
Confidence 5553
No 227
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.34 E-value=3.1e-07 Score=88.13 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
++|||||||++||+||..|+++|++|+|+|+++.+||..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~ 40 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRA 40 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcE
Confidence 479999999999999999999999999999999999843
No 228
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.33 E-value=1.1e-06 Score=82.73 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=74.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||||..|+.+|..+.+.|.+|+++++.+.+.. ....++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~---------------------------------~~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK---------------------------------LMDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST---------------------------------TSCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc---------------------------------cccchhHHH
Confidence 45899999999999999999999999999998774310 011345566
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+..++.++++ +.+++|++++... +.+.++ ..+.+|.||+|+| .+|+.
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~~------v~~~~g--------~~~~~D~vl~a~G--~~Pn~ 242 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGNE------ITFKSG--------KVEHYDMIIEGVG--THPNS 242 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETTE------EEETTS--------CEEECSEEEECCC--EEESC
T ss_pred HHHHhhccceEE--EeccEEEEecCCe------eeecCC--------eEEeeeeEEEEec--eecCc
Confidence 777778888887 9999998876322 666665 7889999999999 56654
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.33 E-value=2.6e-06 Score=81.36 Aligned_cols=101 Identities=16% Similarity=0.094 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHhh----cCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~----~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (395)
..+|+|||||..|+.+|..|.+ .|.+|+++++.+... .... ..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-------------------------------~~~l-~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-------------------------------GKIL-PEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-------------------------------TTTS-CHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-------------------------------cccC-CHH
Confidence 4689999999999999999987 478899998765210 0001 146
Q ss_pred HHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 83 FIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 83 ~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+.+.+++.++++ +.+++|+++..++ +...|.+.++ ..+.+|.||+|+| ..|+.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG--------~~i~aD~Vv~a~G--~~pn~ 284 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG--------RKVETDHIVAAVG--LEPNV 284 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS--------CEEEESEEEECCC--EEECC
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC--------CEEECCEEEECCC--CCccH
Confidence 6777788888888877 9999999998654 4556666654 6899999999999 55654
No 230
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.32 E-value=4.7e-06 Score=79.40 Aligned_cols=110 Identities=15% Similarity=-0.007 Sum_probs=80.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012467778
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.++.|+++...++.....+.+.+... ++.....+.+|.||+|+| .+|+..
T Consensus 234 ~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~-g~~~g~~~~~D~vi~a~G--~~p~~~ 296 (478)
T 3dk9_A 234 CTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGR-LPVMTMIPDVDCLLWAIG--RVPNTK 296 (478)
T ss_dssp HHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTS-CCEEEEEEEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCC-CcccceEEEcCEEEEeec--cccCCC
Confidence 888888888877 999999999875422145566654211 110005789999999999 566654
No 231
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.30 E-value=4.6e-06 Score=79.11 Aligned_cols=101 Identities=15% Similarity=0.079 Sum_probs=78.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..+.+.|.+|+++++.+.+. + ....++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~--~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------S--RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------c--ccCHHHHHH
Confidence 5689999999999999999999999999999876321 0 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEE-EeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.++.|+++..++ ++.+.|. +.++ . +.+|.||+|+| ..|+..
T Consensus 217 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~g--------~-i~aD~Vv~a~G--~~p~~~ 271 (463)
T 4dna_A 217 LHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKHG--------E-IVADQVMLALG--RMPNTN 271 (463)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSSC--------E-EEESEEEECSC--EEESCT
T ss_pred HHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCCC--------e-EEeCEEEEeeC--cccCCC
Confidence 888888888877 9999999998764 2445566 5553 6 99999999999 555544
No 232
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.30 E-value=1.4e-06 Score=81.90 Aligned_cols=105 Identities=23% Similarity=0.335 Sum_probs=72.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHh--hcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN--HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~--~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (395)
++++|||+|+.|+.+|..|++ .+.+|+++.+++......... ........
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~---~~~~g~~~------------------------- 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP---HLAMGWRK------------------------- 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH---HHHHTCSC-------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc---hhccCccC-------------------------
Confidence 689999999999999999999 678999999987332211100 00000000
Q ss_pred CCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC--eEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 265 KPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
...+...+.+.+++.+++++.+ ++.++.+ .+.+++|+++.+|.+|+|||..++.+
T Consensus 55 ---------------~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 55 ---------------FEDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ---------------GGGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ---------------HHHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 0111122334455678888887 8888866 58888998999999999999998764
No 233
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.29 E-value=9.2e-07 Score=81.46 Aligned_cols=44 Identities=25% Similarity=0.298 Sum_probs=40.6
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY 49 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~ 49 (395)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~ 71 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDC 71 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcccee
Confidence 36899999999999999999999999999999999999987753
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.28 E-value=4.9e-06 Score=75.19 Aligned_cols=103 Identities=14% Similarity=0.043 Sum_probs=75.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+ ....+..+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~-----------------------------------~~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF-----------------------------------RAHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC-----------------------------------CSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc-----------------------------------CccHHHHHH
Confidence 468999999999999999999999999999987632 111345566
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.++.|.++..++ +...|.+..... ++. ..+.+|.||+|+| .+|+.
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 254 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQT-QEE--LALEVDAVLILAG--YITKL 254 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECCC--EEEEC
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCC-Cce--EEEecCEEEEeec--CCCCc
Confidence 777777778776 9999999998732 333455552111 121 6799999999999 55553
No 235
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.28 E-value=1.3e-05 Score=76.99 Aligned_cols=107 Identities=16% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++...+ + ....++.+.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l--------------------------------~--~~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILL--------------------------------R--GFDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS--------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEeccccc--------------------------------c--cCCHHHHHH
Confidence 457999999999999999999999999999974311 0 012467788
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCC--CCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+.+++.++++ +.++.++.+...++ .+...+......+ ++. ..+.+|.||+|+| .+|+..
T Consensus 256 ~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g-~~~--~~~~~D~vi~a~G--~~p~~~ 318 (519)
T 3qfa_A 256 IGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNS-EEI--IEGEYNTVMLAIG--RDACTR 318 (519)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSS-SCE--EEEEESEEEECSC--EEESCS
T ss_pred HHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCC-cEE--EEEECCEEEEecC--CcccCC
Confidence 888888888877 88988888876432 1344454433221 111 4678999999999 566544
No 236
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.26 E-value=1.2e-06 Score=83.57 Aligned_cols=52 Identities=19% Similarity=0.355 Sum_probs=43.7
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC-CCeEEEecCCCCCccccc-CCCCceeec
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIWKK-YSYDRLRLH 57 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~~~~gg~~~~-~~~~~l~~~ 57 (395)
..+||+|||||++|+++|..|+++| .+|+|+|+.+.+||.|.. ..+.+...+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~ 61 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWD 61 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEe
Confidence 4689999999999999999999998 799999999999998875 234444433
No 237
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.26 E-value=2.1e-06 Score=80.03 Aligned_cols=105 Identities=17% Similarity=0.269 Sum_probs=72.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGI 263 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (395)
++|+|||+|.+|+.+|..|++ .|.+|+++.+++......... ..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~---------------------------------~~ 48 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALP---------------------------------HV 48 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSC---------------------------------CC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchh---------------------------------hc
Confidence 579999999999999999999 789999999987321100000 00
Q ss_pred CCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC-ceEEeCC--eEEecCCcE----EeCcEEEEccCCCCCcc
Q 016088 264 HKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG-IESIRGN--EVIFENGHS----HHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-v~~~~~~--~v~~~~g~~----~~~D~vi~atG~~~~~~ 334 (395)
. ........+...+.+.+++.+++++.+ +..++.+ .|.+++|+. +++|.||+|||..|+.+
T Consensus 49 ~----------~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 49 A----------IGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp C----------SSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred c----------cCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 0 000011222334455666678888888 8888766 588887764 89999999999988764
No 238
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.24 E-value=2.2e-06 Score=76.00 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=67.9
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCCCC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIHKP 266 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (395)
.+++|||+|+.|+.+|..|++.|.+|+++.+.+........ ...+....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~------~~~~~~~~------------------------- 51 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH------SHGFLGQD------------------------- 51 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC------CCSSTTCT-------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh------hcCCcCCC-------------------------
Confidence 47999999999999999999999999999986521100000 00000000
Q ss_pred CCCcchhhccCCCceeeCchhhhhhcC-CcEEEecC-ceEEeCC----eEEecCCcEEeCcEEEEccCCCCCcc
Q 016088 267 REGPFFMKAAYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIRGN----EVIFENGHSHHFDSIVFCTGFKRSTN 334 (395)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~-v~~~~~~----~v~~~~g~~~~~D~vi~atG~~~~~~ 334 (395)
......+...+.+.+.+ .+++++.+ +..++.+ .+.+++|+.+.+|.||+|||..|..+
T Consensus 52 ----------~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 52 ----------GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp ----------TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred ----------CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 00001111222333444 36777666 7777644 47778888999999999999987654
No 239
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.23 E-value=9e-07 Score=84.34 Aligned_cols=40 Identities=35% Similarity=0.449 Sum_probs=37.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
.+||+|||||++|+++|..|+++|++|+|+|+.+.+||..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 6899999999999999999999999999999999999843
No 240
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.22 E-value=9.3e-07 Score=83.65 Aligned_cols=41 Identities=34% Similarity=0.456 Sum_probs=38.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~ 47 (395)
++||+|||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 57999999999999999999999999999999999988653
No 241
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.21 E-value=7.2e-07 Score=85.91 Aligned_cols=40 Identities=30% Similarity=0.418 Sum_probs=37.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCeEEEecCCCCCccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILERENCYASIW 46 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~~~~gg~~ 46 (395)
.+||+|||||++||+||..|.+.| .+|+|+|+++.+||.+
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 579999999999999999999999 9999999999999854
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.18 E-value=6.3e-06 Score=78.76 Aligned_cols=99 Identities=19% Similarity=0.279 Sum_probs=71.4
Q ss_pred CeEEEECCChHHHHHHHHHhhc--------------CCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~--------------~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 73 (395)
..++|||||+.|+.+|..|.+. ..+|+++|..+.+.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4699999999999999988753 36899999887431
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecC
Q 016088 74 YPMFVSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGE 147 (395)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~ 147 (395)
+. -..++.+++.+.+++.++++ +.+++|++++.+. ..+.....+ ++..+.++.||.||+|+|.
T Consensus 268 -~~--~~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~~----~~~~~~~~d--g~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 -NM--FEKKLSSYAQSHLENTSIKV--HLRTAVAKVEEKQ----LLAKTKHED--GKITEETIPYGTLIWATGN 330 (502)
T ss_dssp -TT--SCHHHHHHHHHHHHHTTCEE--ETTEEEEEECSSE----EEEEEECTT--SCEEEEEEECSEEEECCCE
T ss_pred -cC--CCHHHHHHHHHHHHhcceee--ecCceEEEEeCCc----eEEEEEecC--cccceeeeccCEEEEccCC
Confidence 11 12578888999999999887 9999999987432 222222111 2211267999999999994
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.16 E-value=9.4e-06 Score=76.61 Aligned_cols=99 Identities=17% Similarity=0.254 Sum_probs=72.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-------------------------------R-SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-------------------------------h-hcCHHHHHH
Confidence 46899999999999999999999999999998773210 0 012466777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++. +++ +.++.|.++..+. ....+ ..++ ..+.+|.||+|+| ..|+.
T Consensus 196 l~~~l~~~-v~i--~~~~~v~~i~~~~--~v~~v-~~~g--------~~i~~D~Vv~a~G--~~p~~ 246 (449)
T 3kd9_A 196 LEEKLKKH-VNL--RLQEITMKIEGEE--RVEKV-VTDA--------GEYKAELVILATG--IKPNI 246 (449)
T ss_dssp HHHHHTTT-SEE--EESCCEEEEECSS--SCCEE-EETT--------EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhC-cEE--EeCCeEEEEeccC--cEEEE-EeCC--------CEEECCEEEEeeC--CccCH
Confidence 77777776 665 8999999987543 22123 3332 7899999999999 45553
No 244
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.16 E-value=7.7e-06 Score=74.78 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=72.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 4689999999999999999999999999999876321 00134455
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcE-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+..++.++++ +.+++|+++..++ +.. .|.+.... ++. ..+.+|.||+|+| ..|+.
T Consensus 208 l~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~~v~~~~~~--g~~--~~i~~D~vi~a~G--~~p~~ 265 (360)
T 3ab1_A 208 VERARANGTIDV--YLETEVASIEESN--GVLTRVHLRSSD--GSK--WTVEADRLLILIG--FKSNL 265 (360)
T ss_dssp SHHHHHHTSEEE--ESSEEEEEEEEET--TEEEEEEEEETT--CCE--EEEECSEEEECCC--BCCSC
T ss_pred HHHHhhcCceEE--EcCcCHHHhccCC--CceEEEEEEecC--CCe--EEEeCCEEEECCC--CCCCH
Confidence 555566667666 9999999998764 322 34443111 122 6799999999999 45553
No 245
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.16 E-value=1.6e-06 Score=83.26 Aligned_cols=41 Identities=29% Similarity=0.426 Sum_probs=38.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWK 47 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~ 47 (395)
.+||+|||||++||++|..|+++|++|+|+|+++.+||.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 47999999999999999999999999999999999998654
No 246
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.15 E-value=6.5e-06 Score=80.53 Aligned_cols=98 Identities=15% Similarity=0.262 Sum_probs=76.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. + ....++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------P--PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------c--cCCHHHHHH
Confidence 4689999999999999999999999999999876321 0 012467777
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.++.|+++..+. +. |.+.++ ..+.+|.||+|+| ..|+.
T Consensus 234 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~--v~~~~g--------~~i~~D~Vi~a~G--~~p~~ 284 (588)
T 3ics_A 234 VHEHMKNHDVEL--VFEDGVDALEENG--AV--VRLKSG--------SVIQTDMLILAIG--VQPES 284 (588)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEGGG--TE--EEETTS--------CEEECSEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EECCeEEEEecCC--CE--EEECCC--------CEEEcCEEEEccC--CCCCh
Confidence 888888888877 9999999997643 32 666554 6789999999999 45553
No 247
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.14 E-value=8.5e-06 Score=74.67 Aligned_cols=108 Identities=10% Similarity=0.128 Sum_probs=72.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+... .. . +.......+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~~----d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------DA----D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------CC----C-CCccCCHHHHHH
Confidence 458999999999999999999999999999987632100 00 0 011112355566
Q ss_pred HHHHHHhcC-CcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFN-IVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~-~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+..++.+ +++ +.++.|.+++.++ +.+.+.+.++ + ....+|.+|+|+| ..|+.
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g----~---~~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSG----Q---SVHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSS----C---CEEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCC----e---EeccCCceEEeec--cCCcc
Confidence 777667765 776 8899999997654 5566777654 1 3334699999999 56655
No 248
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.13 E-value=2e-06 Score=82.87 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=37.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
.+||+|||||++|++||..|+++|++|+|+|+++.+||..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCce
Confidence 4799999999999999999999999999999999998854
No 249
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.12 E-value=2.2e-06 Score=81.85 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
..+||+|||||++||++|..|++.|++|+|+|+.+.+||.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 36899999999999999999999999999999999999853
No 250
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.11 E-value=2.4e-06 Score=78.85 Aligned_cols=43 Identities=21% Similarity=0.241 Sum_probs=39.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKY 49 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~ 49 (395)
.+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.|...
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccc
Confidence 4799999999999999999999999999999999999988654
No 251
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.11 E-value=2.4e-06 Score=78.41 Aligned_cols=41 Identities=24% Similarity=0.257 Sum_probs=38.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~ 48 (395)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 69999999999999999999999999999999999997654
No 252
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.11 E-value=2.3e-06 Score=81.86 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=36.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
+||+|||||++|+++|..|.+.|++|+|+|+++.+||..
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~ 78 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRS 78 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcc
Confidence 799999999999999999999999999999999998853
No 253
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.11 E-value=1.4e-05 Score=75.79 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=73.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+. +.+ ...++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITL-EDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCC-CCHHHHHH
Confidence 4689999999999999999999999999999877321 000 02355555
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe--ecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+..+ +++ +.+++|+++..++ .+...+.+. ++.. ..+.+|.||+|+| .+|+..
T Consensus 220 l~~~l~---v~i--~~~~~v~~i~~~~-~~~v~v~~~~~~G~~------~~i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSILK---LNI--KFNSPVTEVKKIK-DDEYEVIYSTKDGSK------KSIFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHC---CCE--ECSCCEEEEEEEE-TTEEEEEECCTTSCC------EEEEESCEEECCC--EEECCC
T ss_pred HHhcCE---EEE--EECCEEEEEEEcC-CCcEEEEEEecCCce------EEEEcCEEEECcC--CCcccc
Confidence 555443 444 8999999998753 144556665 3321 6899999999999 566654
No 254
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.08 E-value=2.8e-06 Score=80.84 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=37.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--CCeEEEecCCCCCcccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--IPYVILERENCYASIWK 47 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--~~v~vie~~~~~gg~~~ 47 (395)
.+||+|||||++|+++|..|+++| .+|+|+|+.+.+||...
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999998887533
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.06 E-value=4.3e-05 Score=74.89 Aligned_cols=105 Identities=15% Similarity=0.080 Sum_probs=72.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||||..|+.+|..|++.|.+|+++++.. +. +. ...++.+.
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~--~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------RG--FDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TT--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------Cc--CCHHHHHH
Confidence 3579999999999999999999999999999763 10 00 12456677
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEe-----C--CCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYD-----E--ATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~-----~--~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+++.++++ +.++.++++... + ..+.+.+...... ++. ..+.+|.||+|+| .+|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~--g~~--~~~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD--GKK--FEEEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEETT--SCE--EEEEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeCC--CcE--EeccCCEEEEEeC--Ccccc
Confidence 777778888876 888888777543 2 1144444432211 121 4456999999999 55654
No 256
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.06 E-value=3.1e-06 Score=81.04 Aligned_cols=41 Identities=29% Similarity=0.300 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
..+||+|||||++|+++|..|.++|.+|+|+|+.+.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 36899999999999999999999999999999999999854
No 257
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.02 E-value=2.7e-05 Score=70.26 Aligned_cols=100 Identities=17% Similarity=0.142 Sum_probs=70.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. .. +.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~----~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------AS----TI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CC----HH
Confidence 4789999999999999999999999999999876321 01 22
Q ss_pred HHHHH-HhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYV-SHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~-~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+ +..++++ +.++.|.++..+. .+...|.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 214 ~~~~l~~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 273 (338)
T 3itj_A 214 MQKRAEKNEKIEI--LYNTVALEAKGDG-KLLNALRIKNTKK-NEE--TDLPVSGLFYAIG--HTPAT 273 (338)
T ss_dssp HHHHHHHCTTEEE--ECSEEEEEEEESS-SSEEEEEEEETTT-TEE--EEEECSEEEECSC--EEECC
T ss_pred HHHHHHhcCCeEE--eecceeEEEEccc-CcEEEEEEEECCC-Cce--EEEEeCEEEEEeC--CCCCh
Confidence 22233 3347666 8999999998765 2233366665211 122 6899999999999 45543
No 258
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.02 E-value=4.3e-05 Score=68.09 Aligned_cols=99 Identities=19% Similarity=0.159 Sum_probs=69.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. .. ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------cc----HH
Confidence 4689999999999999999999999999999876310 00 12
Q ss_pred HHHHHHh-cCCcceeeeeeeEEEeEEeCCCCcE-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+.+ .++++ +.+++++++..++ +.. .+.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 185 ~~~~l~~~~gv~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 244 (310)
T 1fl2_A 185 LQDKLRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HNIELAGIFVQIG--LLPNT 244 (310)
T ss_dssp HHHHHHTCTTEEE--ESSEEEEEEEESS--SSEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhhCCCeEE--ecCCceEEEEcCC--CcEEEEEEEECCC-CcE--EEEEcCEEEEeeC--CccCc
Confidence 2333344 46665 8999999998653 332 456654211 222 6799999999999 45553
No 259
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.99 E-value=1.8e-05 Score=71.20 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=68.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-----------------------------------ANKVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-----------------------------------cchHH---
Confidence 4689999999999999999999999999999876210 00122
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+...++.++++ +.+++|+++..+. ....|.+.+... |+. ..+.+|.||+|+| .+|+.
T Consensus 194 ~~~l~~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 251 (325)
T 2q7v_A 194 QARAFANPKMKF--IWDTAVEEIQGAD--SVSGVKLRNLKT-GEV--SELATDGVFIFIG--HVPNT 251 (325)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhcCCceE--ecCCceEEEccCC--cEEEEEEEECCC-CcE--EEEEcCEEEEccC--CCCCh
Confidence 222223346665 8999999998642 333455553111 121 5799999999999 55654
No 260
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.99 E-value=1.1e-05 Score=71.78 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=30.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.-.|+|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3469999999999999999999999999999865
No 261
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.99 E-value=6.1e-06 Score=77.47 Aligned_cols=42 Identities=17% Similarity=0.307 Sum_probs=39.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~ 48 (395)
.+||+|||+|++|+++|..|++.|++|+++|+++..||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 589999999999999999999999999999999999997654
No 262
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.98 E-value=3.4e-05 Score=69.03 Aligned_cols=99 Identities=20% Similarity=0.254 Sum_probs=70.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ... ..
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HH
Confidence 4689999999999999999999999999999876321 011 22
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
++...+..++++ +.++.|+++..+. +...|.+.+... |+. ..+.+|.||+|+| ..|+
T Consensus 196 ~~~~~~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~ 252 (323)
T 3f8d_A 196 VETVKKKPNVEF--VLNSVVKEIKGDK--VVKQVVVENLKT-GEI--KELNVNGVFIEIG--FDPP 252 (323)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTT-CCE--EEEECSEEEECCC--EECC
T ss_pred HHHHHhCCCcEE--EeCCEEEEEeccC--ceeEEEEEECCC-Cce--EEEEcCEEEEEEC--CCCC
Confidence 333344447665 8999999998653 444566665211 121 5899999999999 5555
No 263
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.97 E-value=3.1e-05 Score=69.37 Aligned_cols=99 Identities=21% Similarity=0.222 Sum_probs=69.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l~-- 197 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAYV-- 197 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHHH--
Confidence 4689999999999999999999999999999876210 012222
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCC-cEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATN-MWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+.++++ +.+++|+++..++ + ...+.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 198 --~~l~~~gv~i--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 254 (319)
T 3cty_A 198 --QEIKKRNIPY--IMNAQVTEIVGDG--KKVTGVKYKDRTT-GEE--KLIETDGVFIYVG--LIPQT 254 (319)
T ss_dssp --HHHHHTTCCE--ECSEEEEEEEESS--SSEEEEEEEETTT-CCE--EEECCSEEEECCC--EEECC
T ss_pred --HHHhcCCcEE--EcCCeEEEEecCC--ceEEEEEEEEcCC-Cce--EEEecCEEEEeeC--CccCh
Confidence 3334567776 9999999998754 3 22355542111 121 5799999999999 45553
No 264
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.96 E-value=2.1e-05 Score=70.17 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=68.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~-- 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL-- 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH--
Confidence 4789999999999999999999999999999876220 001222
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+...++.++++ +.++.++++..++ ++...+.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 186 -~~l~~~~gv~v--~~~~~v~~i~~~~-~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 243 (311)
T 2q0l_A 186 -EHAKNNDKIEF--LTPYVVEEIKGDA-SGVSSLSIKNTAT-NEK--RELVVPGFFIFVG--YDVNN 243 (311)
T ss_dssp -HHHHTCTTEEE--ETTEEEEEEEEET-TEEEEEEEEETTT-CCE--EEEECSEEEECSC--EEECC
T ss_pred -HHHhhCCCeEE--EeCCEEEEEECCC-CcEeEEEEEecCC-Cce--EEEecCEEEEEec--CccCh
Confidence 22223356665 8899999998763 1222355553111 121 5799999999999 55654
No 265
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.96 E-value=6.6e-06 Score=78.23 Aligned_cols=42 Identities=40% Similarity=0.529 Sum_probs=38.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCCCCCccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERENCYASIWKK 48 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~~~gg~~~~ 48 (395)
.+||+|||||++|+++|..|.+.|. +|+|+|+.+.+||.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 5799999999999999999999998 89999999999987654
No 266
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.95 E-value=8.6e-06 Score=74.56 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
++||+|||||++|+++|..|+++|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 5899999999999999999999999999999875
No 267
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.92 E-value=4.5e-05 Score=68.69 Aligned_cols=102 Identities=22% Similarity=0.275 Sum_probs=69.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999999876320 01111
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcE-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.++..++.++++ +.+++|+++..+.+.... .+.+.+... ++. ..+.+|.||+|+| .+|+.
T Consensus 201 ~~~~~~~~gv~i--~~~~~v~~i~~~~~~~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~ 261 (333)
T 1vdc_A 201 QQRALSNPKIDV--IWNSSVVEAYGDGERDVLGGLKVKNVVT-GDV--SDLKVSGLFFAIG--HEPAT 261 (333)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESSSSSSEEEEEEEETTT-CCE--EEEECSEEEECSC--EEESC
T ss_pred HHHHHhCCCeeE--ecCCceEEEeCCCCccceeeEEEEecCC-Cce--EEEecCEEEEEeC--Cccch
Confidence 123344567665 889999999865411032 255543211 122 6799999999999 55654
No 268
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.92 E-value=8.5e-06 Score=76.62 Aligned_cols=42 Identities=24% Similarity=0.305 Sum_probs=39.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~ 48 (395)
.+||+|||+|.+|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 20 ~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 20 HYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 589999999999999999999999999999999999986553
No 269
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.90 E-value=7.1e-05 Score=67.27 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=71.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ......
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~~-- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHSV-- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHHH--
Confidence 4689999999999999999999999999999876321 011111
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
..+++.++++ +.++.|.++..+. +...|.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 197 --~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~~~~D~vv~a~G--~~p~~ 252 (332)
T 3lzw_A 197 --ENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKG-DRK--EILEIDDLIVNYG--FVSSL 252 (332)
T ss_dssp --HHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTS-CCE--EEEECSEEEECCC--EECCC
T ss_pred --HHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCC-Cce--EEEECCEEEEeec--cCCCc
Confidence 2245667776 8899999998754 344566665322 222 6799999999999 55544
No 270
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.88 E-value=6.9e-06 Score=77.04 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999876
No 271
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.87 E-value=3.1e-05 Score=69.04 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=70.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+. ... ..
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AAP---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SCH---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CCH---HH
Confidence 4689999999999999999999999999999876320 011 22
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
+.+..++.++++ +.++.|.++..+. +....+.+.... |+. ..+.+|.||+|+| ..|+..
T Consensus 189 ~~~~~~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~--g~~--~~~~~D~vv~a~G--~~p~~~ 247 (315)
T 3r9u_A 189 VEKVKKNEKIEL--ITSASVDEVYGDK-MGVAGVKVKLKD--GSI--RDLNVPGIFTFVG--LNVRNE 247 (315)
T ss_dssp HHHHHHCTTEEE--ECSCEEEEEEEET-TEEEEEEEECTT--SCE--EEECCSCEEECSC--EEECCG
T ss_pred HHHHHhcCCeEE--EeCcEEEEEEcCC-CcEEEEEEEcCC--CCe--EEeecCeEEEEEc--CCCCch
Confidence 333445667666 8999999998754 122234444111 222 5899999999999 555543
No 272
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.86 E-value=2.3e-05 Score=70.80 Aligned_cols=101 Identities=15% Similarity=0.201 Sum_probs=68.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ....+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-----------------------------------~~~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-----------------------------------ASKIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-----------------------------------SCTTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-----------------------------------ccHHHH--
Confidence 4689999999999999999999999999999876320 000111
Q ss_pred HHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCCC
Q 016088 87 LDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFTP 154 (395)
Q Consensus 87 l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~~ 154 (395)
....++.++++ +.+++|+++..+. +...+.+.+... ++. ..+.+|.||+|+| .+|+..
T Consensus 198 -~~~~~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~p~~~ 255 (335)
T 2a87_A 198 -DRARNNDKIRF--LTNHTVVAVDGDT--TVTGLRVRDTNT-GAE--TTLPVTGVFVAIG--HEPRSG 255 (335)
T ss_dssp -HHHHHCTTEEE--ECSEEEEEEECSS--SCCEEEEEEETT-SCC--EEECCSCEEECSC--EEECCT
T ss_pred -HHHhccCCcEE--EeCceeEEEecCC--cEeEEEEEEcCC-Cce--EEeecCEEEEccC--CccChh
Confidence 12334557665 8899999998654 322344443111 121 6899999999999 566543
No 273
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.83 E-value=1.2e-05 Score=78.78 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=37.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
.+||+|||||++|+++|..|+++|++|+|||+.+..+|.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5899999999999999999999999999999999888644
No 274
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.78 E-value=2e-05 Score=71.63 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+++|||+|+.|+.+|..|++.|.+|+++.+.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~ 36 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEA 36 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999876
No 275
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.78 E-value=2.2e-05 Score=73.04 Aligned_cols=34 Identities=18% Similarity=0.471 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4589999999999999999999999999999876
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.77 E-value=3.2e-05 Score=69.11 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
-.++|||+|+.|+.+|..|++.|.+|+++.+..
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 479999999999999999999999999998754
No 277
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.77 E-value=0.00014 Score=69.75 Aligned_cols=99 Identities=20% Similarity=0.165 Sum_probs=69.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHH
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEY 86 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (395)
..+|+|||+|..|+.+|..|++.+.+|+++++.+.+. .. ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-----------------------------------~~----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-----------------------------------cC----HH
Confidence 4689999999999999999999999999999876321 00 22
Q ss_pred HHHHHHh-cCCcceeeeeeeEEEeEEeCCCCcE-EEEEeecCCCCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 87 LDHYVSH-FNIVPSIRYQRSVESASYDEATNMW-NVKASNLLSPGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 87 l~~~~~~-~~~~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
+.+.+.+ .++++ +.++.++++..++ +.. .+.+.+... ++. ..+.+|.||+|+| ..|+.
T Consensus 396 l~~~l~~~~gV~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~-g~~--~~i~~D~vi~a~G--~~pn~ 455 (521)
T 1hyu_A 396 LQDKVRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVS-GDI--HSVALAGIFVQIG--LLPNT 455 (521)
T ss_dssp HHHHHTTCTTEEE--ECSEEEEEEEECS--SSEEEEEEEETTT-CCE--EEEECSEEEECCC--EEESC
T ss_pred HHHHHhcCCCcEE--EeCCEEEEEEcCC--CcEEEEEEEeCCC-Cce--EEEEcCEEEECcC--CCCCc
Confidence 3334444 46665 9999999998653 333 355554211 222 6799999999999 55554
No 278
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.77 E-value=2.1e-05 Score=77.84 Aligned_cols=41 Identities=32% Similarity=0.361 Sum_probs=37.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 35899999999999999999999999999999999888853
No 279
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.75 E-value=7.2e-05 Score=70.03 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=51.4
Q ss_pred cCCcEEEecC--ceEEeCC----eEEecCCcEEeCcEEEEccC--------CCCCccccccCCCCccCCCCCCCCCCCCc
Q 016088 292 KSGQIQVLPG--IESIRGN----EVIFENGHSHHFDSIVFCTG--------FKRSTNVWLKGDDSMLNDDGIPKQSYPNH 357 (395)
Q Consensus 292 ~~~~i~~~~~--v~~~~~~----~v~~~~g~~~~~D~vi~atG--------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 357 (395)
++.+ +++.+ |++|+.+ .|.+++|+++.+|.||+|+| +.|+++....+..........++++ ..+
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~-~~~ 292 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKIL-IHV 292 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEE-EEE
T ss_pred hhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEE-EEE
Confidence 3444 66666 8888754 26667888899999999999 8888765432221122222335555 344
Q ss_pred ccCCCCeEEEeccc
Q 016088 358 WKGKNGLYCVGLSR 371 (395)
Q Consensus 358 ~~~~~~vya~Gd~~ 371 (395)
.++.+++|+.||..
T Consensus 293 ~~~~~~i~~~~d~~ 306 (431)
T 3k7m_X 293 RGAEAGIECVGDGI 306 (431)
T ss_dssp ESCCTTEEEEBSSS
T ss_pred CCCCcCceEcCCCC
Confidence 56678999999973
No 280
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.73 E-value=7.9e-05 Score=74.19 Aligned_cols=101 Identities=11% Similarity=0.033 Sum_probs=70.6
Q ss_pred CCeEEEEC--CChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIG--aG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+..... .....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~--------------------------------~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN--------------------------------NTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------GGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------cchhH
Confidence 45799999 999999999999999999999998774321100 01123
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
..+.+.+++.++++ +.+++|+++..+. ..+..... +.. ..+.+|.||+|+| .+|+
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~~----~~v~~~~~---~~~--~~i~aD~VV~A~G--~~p~ 625 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAGG----VTVRDTYA---SIE--RELECDAVVMVTA--RLPR 625 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETTE----EEEEETTT---CCE--EEEECSEEEEESC--EEEC
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECCe----EEEEEccC---CeE--EEEECCEEEECCC--CCCC
Confidence 45556667778777 9999999997422 22332211 111 6899999999999 5555
No 281
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.72 E-value=1.6e-05 Score=72.38 Aligned_cols=34 Identities=26% Similarity=0.514 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcC------CCeEEEecCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQS------IPYVILERENC 41 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~------~~v~vie~~~~ 41 (395)
+||+|||||++|+++|..|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 89999998763
No 282
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.72 E-value=3e-05 Score=78.30 Aligned_cols=41 Identities=32% Similarity=0.361 Sum_probs=37.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccc
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIW 46 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~ 46 (395)
..++|+|||||++||++|..|.++|++|+|+|+.+.+||.+
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 35799999999999999999999999999999999998854
No 283
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.70 E-value=3.6e-05 Score=69.67 Aligned_cols=35 Identities=29% Similarity=0.298 Sum_probs=32.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~ 42 (395)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 58999999999999999999999999999987743
No 284
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.69 E-value=4.6e-05 Score=72.73 Aligned_cols=129 Identities=18% Similarity=0.197 Sum_probs=72.6
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcchhhcCCC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKYGIH 264 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (395)
...+|+|||+|++|+.+|..|++.|.+|+++.+.+..--.. . ....+ .....+...-.....+ .+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~-~-------~~~~~-~~~~~l~~~g~~~~~~---~~~-- 156 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHN-V-------LHLWP-FTIHDLRALGAKKFYG---RFC-- 156 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCC-E-------EECCH-HHHHHHHTTTHHHHCT---TTT--
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCC-c-------ccCCh-hHHHHHHHcCCccccc---ccc--
Confidence 36789999999999999999999999999999876211000 0 00000 0000000000000000 000
Q ss_pred CCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-------eEEe--c-CC--cEEeCcEEEEccCCC
Q 016088 265 KPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-------EVIF--E-NG--HSHHFDSIVFCTGFK 330 (395)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-------~v~~--~-~g--~~~~~D~vi~atG~~ 330 (395)
..... ......+...+.+.+++.+++++.+ +..++.+ .|.+ . +| +++.+|.||.|+|..
T Consensus 157 ~~~~~-------~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 157 TGTLD-------HISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp CTTCC-------EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred ccccc-------cCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 00000 0001223334455566678888887 7777642 3666 3 55 578999999999998
Q ss_pred CCcc
Q 016088 331 RSTN 334 (395)
Q Consensus 331 ~~~~ 334 (395)
+...
T Consensus 230 S~~r 233 (497)
T 2bry_A 230 FVPE 233 (497)
T ss_dssp CCCT
T ss_pred cccc
Confidence 7664
No 285
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.66 E-value=0.00011 Score=67.54 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=74.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCcccchh-hH---HHHHHHhhcCChhhHHHHHHHHHHHHhcchhhc
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVLSRE-MV---YLGLVLLRYVPCGGVDTLMVMLSRLVYGDLSKY 261 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~p~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (395)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+.. .+.. .. .....+.+.+ ...+.+ ... .......
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~-~~~~~~~~l~~~~~~~l~~~--g~~~~~----~~~-~~~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL-RAFGAGIYLWHNGLRVLEGL--GALDDV----LQG-SHTPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC-CCCSSEEEEEHHHHHHHHHT--TCHHHH----HTT-CBCCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC-CCCCceEEeCccHHHHHHHc--CCHHHH----Hhh-CCCccce
Confidence 568999999999999999999999999999987621 1100 00 0000000000 000000 000 0000000
Q ss_pred CCCCCCCCcchhh-------ccCCCceeeCchhhhhhcCCcEEEecC--ceEEeCC-eEEecCCcEEeCcEEEEccCCCC
Q 016088 262 GIHKPREGPFFMK-------AAYGKYPVIDAGTCEKIKSGQIQVLPG--IESIRGN-EVIFENGHSHHFDSIVFCTGFKR 331 (395)
Q Consensus 262 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~--v~~~~~~-~v~~~~g~~~~~D~vi~atG~~~ 331 (395)
.+... +..... ........+...+.+.+.+.+++++.+ ++.++.+ .|.+++|+++.+|+||.|+|..+
T Consensus 83 ~~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 83 ETWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred EEEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 00000 000000 000011222344455566678888887 7777643 57788899999999999999875
Q ss_pred Cc
Q 016088 332 ST 333 (395)
Q Consensus 332 ~~ 333 (395)
..
T Consensus 161 ~v 162 (379)
T 3alj_A 161 KV 162 (379)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 286
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.65 E-value=0.00017 Score=64.29 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4689999999999999999999999999999765
No 287
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.64 E-value=5e-05 Score=72.94 Aligned_cols=34 Identities=26% Similarity=0.343 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+++|||+|+.|+-+|..|++.|.+|+++.+.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 5789999999999999999999999999999886
No 288
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.63 E-value=6e-05 Score=69.85 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+.+|..+++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999999999999876
No 289
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.57 E-value=0.00021 Score=67.60 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
..+|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 57899999999999999999999999999998763
No 290
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.55 E-value=0.00016 Score=74.56 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=69.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEYL 87 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (395)
.+|+|||+|..|+.+|..|.+.|.+|+|+++.+.+. . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~-~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------A-A----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------H-H-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------h-h-----
Confidence 689999999999999999999999999999876210 0 1
Q ss_pred HHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEee--cCC-CCceeeEEEEeCEEEEeecCCCCCCC
Q 016088 88 DHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASN--LLS-PGRVIEEYYSGRFLVVASGETSNPFT 153 (395)
Q Consensus 88 ~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~--~~~-~~~~~~~~~~~d~vVlAtG~~~~p~~ 153 (395)
.+.+++.++++ +.++.|+++..+++.+.-.|++.+ ..+ .|+. ..+.+|.||+|+| .+|+.
T Consensus 323 ~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~--~~i~~D~Vv~a~G--~~P~~ 385 (965)
T 2gag_A 323 AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEARELGGT--QRFEADVLAVAGG--FNPVV 385 (965)
T ss_dssp HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCEEEE--EEEECSEEEEECC--EEECC
T ss_pred HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCCCce--EEEEcCEEEECCC--cCcCh
Confidence 23456678877 999999999863112322354443 100 0111 6799999999999 56653
No 291
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.53 E-value=4.2e-05 Score=72.13 Aligned_cols=98 Identities=17% Similarity=0.269 Sum_probs=62.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh-h------cCeeEEEEecCCcccchhhHHHHHHHhhcCChhhHHHHHHHHHHHHhcch
Q 016088 186 GKNVLVVGSGNSGMEIALDLAN-H------AAKTSLVIRSPVHVLSREMVYLGLVLLRYVPCGGVDTLMVMLSRLVYGDL 258 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~-~------g~~v~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (395)
+++++|||+|+.|+.+|..|++ . +.+|+++.+.+... ...
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g---g~~------------------------------ 49 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW---GLV------------------------------ 49 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS---THH------------------------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC---Ccc------------------------------
Confidence 5689999999999999999999 7 88999999986311 000
Q ss_pred hhcCCCCCCCCcchhhccCCCceeeCchhhhhhcCCcEEEecCceEEeCCeEEecCCcEEeCcEEEEccCCC
Q 016088 259 SKYGIHKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQVLPGIESIRGNEVIFENGHSHHFDSIVFCTGFK 330 (395)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~v~~~~g~~~~~D~vi~atG~~ 330 (395)
.+++..... ....+...+.+.+++.+++++.++. + ...|.++++ .+.+|.||+|||..
T Consensus 50 -~~gv~p~~~----------~~~~~~~~~~~~~~~~~v~~~~~v~-v-~~~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 50 -RSGVAPDHP----------KIKSISKQFEKTAEDPRFRFFGNVV-V-GEHVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp -HHTSCTTCT----------GGGGGHHHHHHHHTSTTEEEEESCC-B-TTTBCHHHH-HHHSSEEEECCCCC
T ss_pred -ccccCCCCC----------CHHHHHHHHHHHHhcCCCEEEeeEE-E-CCEEEECCC-eEeCCEEEEeeCCC
Confidence 011100000 0011112234455667888877732 2 234556665 47899999999997
No 292
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.50 E-value=0.00017 Score=67.93 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~ 59 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGN 59 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3579999999999999999999999999999876
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.50 E-value=0.00012 Score=70.58 Aligned_cols=34 Identities=18% Similarity=0.274 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+.+|..|.+.|.+|+++.+.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4579999999999999999999999999999876
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.45 E-value=0.00046 Score=64.93 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-eEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~-v~vie~~~ 40 (395)
..+|+|||+|.+|+..|..|++.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999999998 99999876
No 295
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.43 E-value=0.00014 Score=70.60 Aligned_cols=44 Identities=20% Similarity=0.384 Sum_probs=40.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCCccccc
Q 016088 5 AAGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYASIWKK 48 (395)
Q Consensus 5 ~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~ 48 (395)
+.+|||+|||+|..|...|..|++.|.+|++||+++..||.|..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 34699999999999999999999999999999999999998775
No 296
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.42 E-value=0.00015 Score=69.92 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHH-hhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLA-NHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~-~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+.+|..|+ +.|.+|+++.+.+
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~ 42 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKAD 42 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 47999999999999999999 8999999999875
No 297
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.41 E-value=7.9e-05 Score=69.02 Aligned_cols=33 Identities=24% Similarity=0.365 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999876
No 298
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.40 E-value=0.00035 Score=65.75 Aligned_cols=34 Identities=21% Similarity=0.341 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-eEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~-v~vie~~~ 40 (395)
..+|+|||||..|+.+|..+.+.|.+ |+++++.+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 47899999999999999999999984 99998876
No 299
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.40 E-value=0.00012 Score=70.75 Aligned_cols=35 Identities=40% Similarity=0.571 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|++|||+|++|+.+|..|++.|.+|+|+|+.+
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46999999999999999999999999999999876
No 300
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.36 E-value=0.0012 Score=62.13 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=30.2
Q ss_pred CCeEEEECCChHHHHHHHHHh--------------------hcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLS--------------------LQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~--------------------~~~~-~v~vie~~~ 40 (395)
..+|+|||+|..|+.+|..|+ +.+. +|+|+++.+
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 468999999999999999998 5677 699999876
No 301
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.35 E-value=0.00014 Score=70.25 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|.+.|.+|+++.+.+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4579999999999999999999999999999876
No 302
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.32 E-value=9.2e-05 Score=71.68 Aligned_cols=141 Identities=16% Similarity=0.138 Sum_probs=73.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCccc-----chhhHHHHHHHhhcCChhhHHHHHHH---HHHHHhcc
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL-----SREMVYLGLVLLRYVPCGGVDTLMVM---LSRLVYGD 257 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~-----p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 257 (395)
..+|+|||+|..|+++|..+++.|.+|.++.+.+..+. |.. ..+. ...+...+... +.......
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~-GGia-------~g~lv~eldalgg~~~~~~d~~ 98 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAI-GGIA-------KGIVVREIDALGGEMGKAIDQT 98 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEE-ECTT-------HHHHHHHHHHHTCSHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccc-cccc-------hHHHHHHHHHhhhHHHHHhhhc
Confidence 35799999999999999999999999999998641110 100 0000 00011110000 00000000
Q ss_pred hhhcCCCCCCCCcchhhc-cCCCceeeCchhhhhhcC-CcEEEecC-ceEEe--CC---eEEecCCcEEeCcEEEEccCC
Q 016088 258 LSKYGIHKPREGPFFMKA-AYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTGF 329 (395)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~i~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG~ 329 (395)
...+.......++..... .......+...+.+.+++ .++++... |+.+. ++ +|.+.+|..+.+|.||+|||.
T Consensus 99 gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 99 GIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp EEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred ccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 000110001111100000 000011233444556666 58888666 77664 23 477889999999999999998
Q ss_pred CCCcc
Q 016088 330 KRSTN 334 (395)
Q Consensus 330 ~~~~~ 334 (395)
.++..
T Consensus 179 ~s~~~ 183 (637)
T 2zxi_A 179 FLNGV 183 (637)
T ss_dssp CBTCE
T ss_pred CccCc
Confidence 76653
No 303
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.32 E-value=0.00013 Score=70.15 Aligned_cols=35 Identities=29% Similarity=0.419 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie~~~~ 41 (395)
+||+||||||++|+.+|.+|++ .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 6999999999999999999998 5789999998753
No 304
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.27 E-value=0.00013 Score=64.98 Aligned_cols=33 Identities=30% Similarity=0.537 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh--cCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~--g~~v~~~~r~~ 219 (395)
.+++|||+|++|+-+|..|++. |.+|+++.+.+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~ 100 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCc
Confidence 3799999999999999999998 99999999865
No 305
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.25 E-value=0.0001 Score=72.51 Aligned_cols=36 Identities=28% Similarity=0.429 Sum_probs=33.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC--------CCeEEEecCC-CC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS--------IPYVILEREN-CY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~--------~~v~vie~~~-~~ 42 (395)
.++|+|||||++|+++|..|.+.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 8999999998 88
No 306
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.25 E-value=0.00042 Score=68.78 Aligned_cols=127 Identities=16% Similarity=0.006 Sum_probs=65.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEec--CCCCCcc--c-ccC----CCCceeeccccccccCCCCCCCCCCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILER--ENCYASI--W-KKY----SYDRLRLHLAKQFCQLPHLPFPSSYPMF 77 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~--~~~~gg~--~-~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 77 (395)
..+|+|||||..|+.+|..|++.|.+++++-. ...+|.. + ... .++.+.. ......-+...+ ......
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~v~l~~~~~--~~l~~~ 570 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPR-SPRQIVMLQRKA--SKPGQG 570 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCC-CSSEEEEECSSC--SCTTTT
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCC-CCcEEEEEEecc--hhhccc
Confidence 46899999999999999999999877664210 0000000 0 000 0000000 000000000000 000000
Q ss_pred CCHHHHHHHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEeecCCCCceeeEEEEeCEEEEeecCCCCCC
Q 016088 78 VSRAQFIEYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKASNLLSPGRVIEEYYSGRFLVVASGETSNPF 152 (395)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~vVlAtG~~~~p~ 152 (395)
. .......+.+.+++.++++ +.+++|++++. +...+. .++ +. ..+.+|.||+|+| .+|+
T Consensus 571 l-~~~~~~~~~~~l~~~GV~v--~~~~~v~~i~~----~~v~~~-~~G----~~--~~i~~D~Vi~a~G--~~p~ 629 (671)
T 1ps9_A 571 L-GKTTGWIHRTTLLSRGVKM--IPGVSYQKIDD----DGLHVV-ING----ET--QVLAVDNVVICAG--QEPN 629 (671)
T ss_dssp S-CTTTHHHHHHHHHHTTCEE--ECSCEEEEEET----TEEEEE-ETT----EE--EEECCSEEEECCC--EEEC
T ss_pred c-ccccHHHHHHHHHhcCCEE--EeCcEEEEEeC----CeEEEe-cCC----eE--EEEeCCEEEECCC--cccc
Confidence 0 0122344555666778776 99999998872 233333 332 22 6799999999999 5555
No 307
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.25 E-value=0.00021 Score=69.23 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcC-CCeEEEecCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQS-IPYVILERENC 41 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~~~ 41 (395)
..||+||||||.||+.+|.+|++.+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999987 69999999875
No 308
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.23 E-value=0.00063 Score=66.13 Aligned_cols=139 Identities=13% Similarity=0.154 Sum_probs=72.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCCccc-----chh----hHHHHHHHhhcCChhhHHHHHHHHHHHHhc
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPVHVL-----SRE----MVYLGLVLLRYVPCGGVDTLMVMLSRLVYG 256 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~~~~-----p~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (395)
..+|+|||+|..|+++|..+++.|.+|.++.+.+..+. |.. ...+...+.. +... +......
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~a-lgg~----~~~~~d~---- 98 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA-LGGL----MAKAIDQ---- 98 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHH-TTCS----HHHHHHH----
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHH-hccH----HHHHhhh----
Confidence 35799999999999999999999999999998641110 100 0000000000 0000 0000000
Q ss_pred chhhcCCCCCCCCcchhhc-cCCCceeeCchhhhhhcC-CcEEEecC-ceEEe--CC---eEEecCCcEEeCcEEEEccC
Q 016088 257 DLSKYGIHKPREGPFFMKA-AYGKYPVIDAGTCEKIKS-GQIQVLPG-IESIR--GN---EVIFENGHSHHFDSIVFCTG 328 (395)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~i~~~~~-v~~~~--~~---~v~~~~g~~~~~D~vi~atG 328 (395)
....+.......++..... .......+...+.+.+++ .++++... ++.+. ++ +|.+.+|..+.+|.||+|||
T Consensus 99 ~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATG 178 (651)
T 3ces_A 99 AGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVG 178 (651)
T ss_dssp HEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCS
T ss_pred cccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCC
Confidence 0000111011111110000 000001233444556666 68888666 77774 33 46778888899999999999
Q ss_pred CCCCc
Q 016088 329 FKRST 333 (395)
Q Consensus 329 ~~~~~ 333 (395)
..+..
T Consensus 179 t~s~~ 183 (651)
T 3ces_A 179 TFLDG 183 (651)
T ss_dssp TTTCC
T ss_pred CCccC
Confidence 87654
No 309
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.23 E-value=0.00078 Score=67.41 Aligned_cols=104 Identities=10% Similarity=0.009 Sum_probs=68.1
Q ss_pred CCeEEEEC--CChHHHHHHHHHhhcCCCeEEEecCCCCCcccccCCCCceeeccccccccCCCCCCCCCCCCCCCHHHHH
Q 016088 7 GVEVIIVG--AGPSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (395)
Q Consensus 7 ~~~vvIIG--aG~aGl~~A~~l~~~~~~v~vie~~~~~gg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (395)
..+|+||| ||..|+.+|..|++.|.+|+++++.+ +...... . .. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~--------------------------~--~~----~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF--------------------------T--LE----Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH--------------------------T--TC----H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc--------------------------c--cc----H
Confidence 46899999 99999999999999999999999876 3210000 0 01 2
Q ss_pred HHHHHHHHhcCCcceeeeeeeEEEeEEeCCCCcEEEEEe--ecCC-------------CCceeeEEEEeCEEEEeecCCC
Q 016088 85 EYLDHYVSHFNIVPSIRYQRSVESASYDEATNMWNVKAS--NLLS-------------PGRVIEEYYSGRFLVVASGETS 149 (395)
Q Consensus 85 ~~l~~~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~v~~~--~~~~-------------~~~~~~~~~~~d~vVlAtG~~~ 149 (395)
..+.+.+++.++++ +.++.|+++..+ ...+... ++.. +++. ..+.+|.||+|+| .
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~aD~Vv~a~G--~ 644 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSH--RWIEFDSLVLVTG--R 644 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCC--EEEECSEEEEESC--E
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcc--eeeeCCEEEECCC--C
Confidence 34445556678776 999999988732 2223321 1100 0111 4599999999999 5
Q ss_pred CCCC
Q 016088 150 NPFT 153 (395)
Q Consensus 150 ~p~~ 153 (395)
.|+.
T Consensus 645 ~p~~ 648 (729)
T 1o94_A 645 HSEC 648 (729)
T ss_dssp EECC
T ss_pred CCCh
Confidence 5553
No 310
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.19 E-value=0.00018 Score=69.30 Aligned_cols=35 Identities=37% Similarity=0.473 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~ 42 (395)
.||+||||||++|+.+|.+|++ +.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 5899999999999999999999 9999999998654
No 311
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.19 E-value=7.7e-05 Score=72.36 Aligned_cols=34 Identities=24% Similarity=0.347 Sum_probs=30.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 3579999999999999999999999999999876
No 312
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.16 E-value=0.00092 Score=61.30 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3579999999999999999999999999999864
No 313
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.16 E-value=0.00016 Score=70.28 Aligned_cols=34 Identities=32% Similarity=0.449 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|..|+++|..+++.|.+|.++.+.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 4589999999999999999999999999999864
No 314
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.15 E-value=0.00017 Score=66.72 Aligned_cols=35 Identities=31% Similarity=0.425 Sum_probs=32.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecCC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSPV 220 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~~ 220 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 56899999999999999999999999999998763
No 315
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.12 E-value=0.00026 Score=68.94 Aligned_cols=35 Identities=23% Similarity=0.363 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
...+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 35789999999999999999999999999999875
No 316
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.08 E-value=0.00045 Score=66.04 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=34.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENCYA 43 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~g 43 (395)
..+|++|||+|++|+.+|..|++.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999887443
No 317
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.04 E-value=9.6e-05 Score=66.21 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhh--cCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~--g~~v~~~~r~~ 219 (395)
..+|+|||+|+.|+-+|..|++. |.+|.++.+.+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 35799999999999999999998 99999999876
No 318
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.03 E-value=0.00043 Score=67.00 Aligned_cols=35 Identities=37% Similarity=0.566 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~ 40 (395)
..||+||||||.||+.+|.+|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 359999999999999999999975 78999999887
No 319
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.02 E-value=0.00062 Score=61.19 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999875
No 320
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.01 E-value=0.0028 Score=61.56 Aligned_cols=34 Identities=35% Similarity=0.610 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+.+|..+++.|.+|+++.+.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4579999999999999999999999999999876
No 321
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.01 E-value=0.0035 Score=65.14 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||||..|+.+|..+.+.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999996 899999875
No 322
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.99 E-value=0.00047 Score=62.30 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=30.4
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~ 219 (395)
++|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 899999999875
No 323
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.98 E-value=0.00018 Score=66.83 Aligned_cols=35 Identities=20% Similarity=0.370 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
+..+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35689999999999999999999999999999976
No 324
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.98 E-value=0.0017 Score=60.34 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 325
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.96 E-value=0.00062 Score=65.10 Aligned_cols=36 Identities=28% Similarity=0.436 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
.++|++|||+|++|+.+|..|.+.+.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 368999999999999999999999999999998764
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.95 E-value=0.00073 Score=56.55 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 183 ~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
++++++|+|||+|.+|...+..|.+.|++|+++.+..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4568999999999999999999999999999997543
No 327
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.93 E-value=0.0029 Score=61.36 Aligned_cols=34 Identities=35% Similarity=0.575 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3479999999999999999999999999999876
No 328
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.92 E-value=0.00061 Score=62.98 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5689999999999999999999999999999976
No 329
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.91 E-value=0.00098 Score=52.62 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=33.0
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
|+......+|+|||+|..|..+|..|.+.|.+|+++|+.+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4555556789999999999999999999999999999865
No 330
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.90 E-value=0.0016 Score=59.91 Aligned_cols=33 Identities=21% Similarity=0.394 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 469999999999999999999999999999876
No 331
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.90 E-value=0.0011 Score=60.31 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 332
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=96.90 E-value=0.0042 Score=57.74 Aligned_cols=49 Identities=14% Similarity=0.160 Sum_probs=37.0
Q ss_pred eCchhhhhhcCCcEEEecC--ceEEeCC--eEEecCCcEEeCcEEEEccCCCC
Q 016088 283 IDAGTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTGFKR 331 (395)
Q Consensus 283 ~~~~~~~~~~~~~i~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG~~~ 331 (395)
+.+.+.+.+++.+++++.+ |+++..+ ++...+|+++.+|.||+|+|...
T Consensus 191 l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 191 VIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHH
Confidence 3445566667778889888 8888754 45456888999999999998753
No 333
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.89 E-value=0.00042 Score=66.96 Aligned_cols=36 Identities=28% Similarity=0.419 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHhh-cCCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSL-QSIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie~~~~~ 42 (395)
.||+||||||.+|+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 68999999987644
No 334
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.89 E-value=0.0012 Score=61.05 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=30.6
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999876
No 335
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.84 E-value=0.00065 Score=65.07 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 579999999999999999999999999999876
No 336
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.82 E-value=0.0037 Score=57.17 Aligned_cols=34 Identities=29% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4579999999999999999999999999999865
No 337
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.82 E-value=0.00096 Score=64.92 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=32.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhh-cCCCeEEEecCCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSL-QSIPYVILERENC 41 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~-~~~~v~vie~~~~ 41 (395)
..+|++|||+|++|+.+|..|++ .+.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 35899999999999999999999 7999999998754
No 338
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.78 E-value=0.0033 Score=58.02 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh-hc-CeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLAN-HA-AKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~-~g-~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 4579999999999999999999 99 8999999875
No 339
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.72 E-value=0.003 Score=60.89 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 340
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.70 E-value=0.0011 Score=63.85 Aligned_cols=36 Identities=31% Similarity=0.416 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~~~ 42 (395)
.+|++|||+|++|+.+|..|++. +.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 58999999999999999999998 8999999987644
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.69 E-value=0.0043 Score=61.57 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999999999999999999999999853
No 342
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.60 E-value=0.0034 Score=59.01 Aligned_cols=33 Identities=33% Similarity=0.507 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999876
No 343
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.56 E-value=0.00028 Score=67.34 Aligned_cols=34 Identities=29% Similarity=0.407 Sum_probs=31.9
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5579999999999999999999999999999876
No 344
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.55 E-value=0.002 Score=58.95 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=30.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 578999999999999999999 599999999874
No 345
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.55 E-value=0.013 Score=55.89 Aligned_cols=35 Identities=14% Similarity=0.253 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhc--CCCeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ--SIPYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~~ 41 (395)
.++|+|||+|.+|...+..|+++ +.+|+++-+.+.
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 57899999999999999999875 678999988763
No 346
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.55 E-value=0.0054 Score=59.51 Aligned_cols=34 Identities=29% Similarity=0.592 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|..|+.+|..|++.|.+|+++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4579999999999999999999999999999876
No 347
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.53 E-value=0.00026 Score=67.52 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=31.9
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5679999999999999999999999999999876
No 348
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.53 E-value=0.01 Score=56.72 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
-.|+|||+|..|+-+|..+++.|.+|.++.+.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 479999999999999999999999999999876
No 349
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.51 E-value=0.0019 Score=59.50 Aligned_cols=33 Identities=36% Similarity=0.457 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 350
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.39 E-value=0.003 Score=62.77 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4689999999999999999999999999999864
No 351
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.32 E-value=0.0016 Score=61.98 Aligned_cols=32 Identities=25% Similarity=0.466 Sum_probs=29.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+++|||+|+.|+.+|..|++. .+|+++.+.+
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 4699999999999999999999 9999999876
No 352
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.31 E-value=0.0015 Score=62.91 Aligned_cols=34 Identities=38% Similarity=0.579 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 353
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.22 E-value=0.006 Score=47.06 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4589999999999999999999999999999875
No 354
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.18 E-value=0.005 Score=47.54 Aligned_cols=34 Identities=15% Similarity=0.324 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999865
No 355
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=96.12 E-value=0.032 Score=53.64 Aligned_cols=32 Identities=34% Similarity=0.703 Sum_probs=30.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|..|+-+|..+++ |.+|.++.+.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 479999999999999999999 99999999876
No 356
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.08 E-value=0.014 Score=55.12 Aligned_cols=31 Identities=23% Similarity=0.507 Sum_probs=29.1
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCeeEEEEec
Q 016088 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~ 218 (395)
+|+|||+|..|+-+|..|++.|.+|+++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999986
No 357
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=95.93 E-value=0.0036 Score=60.11 Aligned_cols=34 Identities=24% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh------------hcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLAN------------HAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~------------~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 789999999865
No 358
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=95.91 E-value=0.017 Score=54.99 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 479999999999999999999999999999865
No 359
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.91 E-value=0.012 Score=46.12 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4579999999999999999999999999999863
No 360
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.87 E-value=0.007 Score=58.83 Aligned_cols=33 Identities=27% Similarity=0.507 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh------cCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANH------AAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~------g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++. |.+|.++.+.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4799999999999999999998 99999999876
No 361
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=95.85 E-value=0.0089 Score=60.79 Aligned_cols=34 Identities=18% Similarity=0.433 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcC-eeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~-~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|. +|+++.+.+
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~ 38 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 38 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCC
Confidence 3579999999999999999999998 899999876
No 362
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.79 E-value=0.01 Score=45.49 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|..|...|..|.+.|.+|+++|+.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999765
No 363
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.66 E-value=0.0049 Score=53.16 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=30.4
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
+|+|||+|++|+-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 364
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.60 E-value=0.13 Score=50.09 Aligned_cols=33 Identities=27% Similarity=0.500 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhc--CeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHA--AKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g--~~v~~~~r~~ 219 (395)
.+|+|||+|..|+-+|..|++.| .+|.++.+.+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 36999999999999999999999 9999999875
No 365
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.58 E-value=0.11 Score=50.44 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..+++.|.+|.++.+.+
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 379999999999999999999999999999875
No 366
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=95.50 E-value=0.005 Score=59.45 Aligned_cols=33 Identities=36% Similarity=0.612 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 367
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.44 E-value=0.017 Score=44.35 Aligned_cols=34 Identities=12% Similarity=0.156 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|+|+|..|...|..|.+.|.+|+++|+.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3479999999999999999999999999999754
No 368
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.35 E-value=0.09 Score=51.31 Aligned_cols=33 Identities=27% Similarity=0.433 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
-.|+|||+|..|+-+|..+++.|.+|.++.+.+
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 479999999999999999999999999999875
No 369
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.34 E-value=0.014 Score=51.67 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
|+... ..+|+|||+|..|..-|..++..|++|+++|..+
T Consensus 1 Ma~p~-~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPA-AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCC-CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45433 4689999999999999999999999999999765
No 370
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.17 E-value=0.0048 Score=60.73 Aligned_cols=33 Identities=33% Similarity=0.565 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHHh-hcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN-HAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~-~g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++ .|.+|+++.+.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 999999999876
No 371
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.17 E-value=0.02 Score=42.27 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcC-CCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQS-IPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~-~~v~vie~~~ 40 (395)
..+|+|+|+|..|...+..|.+.| .+|+++++.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 358999999999999999999999 8999999865
No 372
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.16 E-value=0.022 Score=46.02 Aligned_cols=34 Identities=21% Similarity=0.233 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-SIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-~~~v~vie~~~ 40 (395)
..+|+|||+|..|..+|..|.+. |++|+++|+.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999865
No 373
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=94.86 E-value=0.0097 Score=56.61 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
|+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999998765
No 374
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.78 E-value=0.035 Score=46.30 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=31.9
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
...+|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35789999999999999999999999999998754
No 375
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.73 E-value=0.061 Score=50.36 Aligned_cols=37 Identities=32% Similarity=0.353 Sum_probs=33.6
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 183 ~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++++++.|||.|.+|+-+|..|++.|.+|+..++++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3568999999999999999999999999999998865
No 376
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.55 E-value=0.039 Score=49.30 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
...+|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 899999765
No 377
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.55 E-value=0.025 Score=47.17 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+|+|+|+|..|...|..|.+.|++|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999765
No 378
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.55 E-value=0.026 Score=52.94 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 184 ~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
+++++|+|||+|.+|...+..|.+.|++|+++.+..
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 458999999999999999999999999999998643
No 379
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.55 E-value=0.03 Score=49.71 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 380
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.49 E-value=0.037 Score=51.88 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.++|.|||.|.+|+++|..|.++|++|++.|.++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 5789999999999999999999999999999865
No 381
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.40 E-value=0.037 Score=48.86 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=31.7
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
|+......+|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5544445789999999999999999999999999999765
No 382
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.38 E-value=0.028 Score=48.45 Aligned_cols=35 Identities=14% Similarity=0.285 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+.|+|||||..|...+..|.+.|.+|+||++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999765
No 383
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.28 E-value=0.045 Score=48.71 Aligned_cols=33 Identities=36% Similarity=0.399 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999998865
No 384
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.16 E-value=0.025 Score=52.72 Aligned_cols=34 Identities=24% Similarity=0.462 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++|+|||+|+.|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 385
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.08 E-value=0.04 Score=51.46 Aligned_cols=36 Identities=19% Similarity=0.395 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENCY 42 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~~ 42 (395)
.++|+|||.|.+|+++|..|+++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 468999999999999999999999999999976643
No 386
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.08 E-value=0.025 Score=51.69 Aligned_cols=32 Identities=38% Similarity=0.493 Sum_probs=30.5
Q ss_pred eEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 188 NVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.|+|||+|++|+-+|..|++.|.+|+++.|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 69999999999999999999999999999876
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.04 E-value=0.078 Score=47.28 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=30.8
Q ss_pred CCeEEEEcCCCCHHH-HHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGME-IALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e-~a~~l~~~g~~v~~~~r~~ 219 (395)
.+++.|||.|.+|+- +|..|.+.|.+|++.++++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 578999999999997 8889999999999998865
No 388
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.02 E-value=0.04 Score=47.51 Aligned_cols=37 Identities=24% Similarity=0.392 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 183 ~~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+++++|+|||+|.+|...+..|.+.|++|+++.+..
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3458999999999999999999999999999998754
No 389
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.95 E-value=0.031 Score=50.73 Aligned_cols=33 Identities=33% Similarity=0.394 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
++|+|||+|..|+++|..+++.|.+|.++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 469999999999999999999999999999765
No 390
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.91 E-value=0.05 Score=48.30 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=30.1
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
|.+.+...+|+|||+|..|..+|..|+..+. +++++|...
T Consensus 1 ~~m~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp ------CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3433335789999999999999999999887 899999654
No 391
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.06 Score=49.08 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|.+|+.+|..+...|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 392
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.74 E-value=0.076 Score=46.99 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=29.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++.|||+|..|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998864
No 393
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.73 E-value=0.085 Score=46.55 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999765
No 394
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.50 E-value=0.078 Score=46.68 Aligned_cols=33 Identities=18% Similarity=0.346 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999765
No 395
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.48 E-value=0.069 Score=47.46 Aligned_cols=33 Identities=18% Similarity=0.375 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|+|||+|..|.+.|..|++.|.+|+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999864
No 396
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.48 E-value=0.07 Score=48.17 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
.+.+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 35799999999999999999999999 899999864
No 397
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.45 E-value=0.064 Score=48.50 Aligned_cols=34 Identities=15% Similarity=0.185 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|..|+.+|..|...|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999875
No 398
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.44 E-value=0.064 Score=41.95 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 184 ~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+++++|+|+|..|..++..|...|.+|+++.|++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 347899999999999999999999999999999876
No 399
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.41 E-value=0.07 Score=46.50 Aligned_cols=33 Identities=15% Similarity=0.248 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999765
No 400
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.39 E-value=0.083 Score=47.27 Aligned_cols=32 Identities=34% Similarity=0.408 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERE 39 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~ 39 (395)
.+|.|||+|..|.+.|..|++.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999974
No 401
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.28 E-value=0.037 Score=51.90 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.++|+|+|+|-.|...|..|...|++|++||+.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5689999999999999999999999999999765
No 402
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.20 E-value=0.09 Score=43.48 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|.+.|..|.+.|.+|+++++.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 403
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.19 E-value=0.1 Score=46.72 Aligned_cols=40 Identities=20% Similarity=0.150 Sum_probs=32.6
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
|+..+...+|.|||.|..|-+.|..|.+.|++|+++|+.+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5544445689999999999999999999999999999765
No 404
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.14 E-value=0.075 Score=47.04 Aligned_cols=33 Identities=33% Similarity=0.397 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|+|||+|..|.+.|..|++.|.+|+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 469999999999999999999999999999865
No 405
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.10 E-value=0.087 Score=45.91 Aligned_cols=32 Identities=19% Similarity=0.152 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999876
No 406
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.06 E-value=0.1 Score=47.09 Aligned_cols=34 Identities=26% Similarity=0.286 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|.+.|..|++.|++|+++++.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 407
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.04 E-value=0.088 Score=46.71 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
..+|+|||+|..|...|..|++.|. +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899999764
No 408
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.03 E-value=0.092 Score=47.35 Aligned_cols=34 Identities=24% Similarity=0.397 Sum_probs=31.3
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCC-CeEEEecC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~ 39 (395)
.+.+|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 36799999999999999999999998 79999986
No 409
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.02 E-value=0.059 Score=49.40 Aligned_cols=33 Identities=27% Similarity=0.473 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 410
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=92.98 E-value=0.073 Score=46.50 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 578999999999999999999 999999999765
No 411
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.96 E-value=0.087 Score=48.66 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 6 AGVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 6 ~~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
...+|.|||+|..|+..|..|++ |++|+++|+.+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34689999999999999999998 99999999765
No 412
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.96 E-value=0.053 Score=51.45 Aligned_cols=34 Identities=29% Similarity=0.459 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 6789999999999999999999999999998765
No 413
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.93 E-value=0.052 Score=41.86 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|..|...+..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999998999998765
No 414
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=92.88 E-value=0.1 Score=46.33 Aligned_cols=35 Identities=26% Similarity=0.423 Sum_probs=29.6
Q ss_pred CCCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 184 ~~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
....++.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 34678999999999999999999999999999 654
No 415
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=92.88 E-value=0.051 Score=50.28 Aligned_cols=33 Identities=24% Similarity=0.412 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 379999999999999999999999999999864
No 416
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.88 E-value=0.058 Score=49.22 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh--cCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~--g~~v~~~~r~~ 219 (395)
.+|+|||+|++|+-+|..|++. |.+|+++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3699999999999999999999 99999999876
No 417
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.81 E-value=0.093 Score=40.87 Aligned_cols=35 Identities=14% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..++++|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 35789999999999999999999999999999864
No 418
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.80 E-value=0.11 Score=46.21 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|..|...|..|++.|+ +|+++|..+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999765
No 419
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.78 E-value=0.096 Score=48.30 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||.|..|..+|..|.+.|++|++||+.+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999765
No 420
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.76 E-value=0.1 Score=45.68 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|+|||+|..|.+.|..|.+.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 469999999999999999999999999999874
No 421
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.65 E-value=0.12 Score=43.82 Aligned_cols=34 Identities=24% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|.+.|..|.+.|++|+++++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 5789999999999999999999999999999765
No 422
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.55 E-value=0.13 Score=45.39 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILERE 39 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~ 39 (395)
..+|.|||+|..|...|..|+..++ +++++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999976
No 423
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.54 E-value=0.051 Score=49.24 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999875
No 424
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.52 E-value=0.063 Score=45.24 Aligned_cols=33 Identities=30% Similarity=0.362 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+++|+|+|..|...|..|.+.|+ |+++|+.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 4689999999999999999999999 99999765
No 425
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.46 E-value=0.093 Score=47.39 Aligned_cols=34 Identities=35% Similarity=0.461 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 4589999999999999999999999999999864
No 426
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.45 E-value=0.064 Score=48.88 Aligned_cols=33 Identities=39% Similarity=0.499 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999865
No 427
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.45 E-value=0.11 Score=48.89 Aligned_cols=34 Identities=29% Similarity=0.542 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|+..|..|++.|++|+++|+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999754
No 428
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.45 E-value=0.083 Score=48.69 Aligned_cols=34 Identities=26% Similarity=0.432 Sum_probs=31.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCe-eEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAK-TSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~-v~~~~r~~ 219 (395)
..+|+|||+|++|+-+|..|++.|.+ |+++.+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35899999999999999999999999 99999976
No 429
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.44 E-value=0.11 Score=44.33 Aligned_cols=34 Identities=26% Similarity=0.440 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|-.|..+|..|++.|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999999998 899999764
No 430
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.39 E-value=0.12 Score=47.53 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|.+|+.++..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999765
No 431
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.33 E-value=0.079 Score=50.33 Aligned_cols=43 Identities=9% Similarity=0.251 Sum_probs=34.5
Q ss_pred hhhhhhcCCcEEEecC--ceEEeCC--eEEecCCcEEeCcEEEEccC
Q 016088 286 GTCEKIKSGQIQVLPG--IESIRGN--EVIFENGHSHHFDSIVFCTG 328 (395)
Q Consensus 286 ~~~~~~~~~~i~~~~~--v~~~~~~--~v~~~~g~~~~~D~vi~atG 328 (395)
.+.+.+.+.+++++.+ |++++.+ .+++.+|+++.+|.||.++.
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 3445566778899888 8888765 58899999999999998875
No 432
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.23 E-value=0.074 Score=49.22 Aligned_cols=34 Identities=15% Similarity=0.426 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc-CeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g-~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 568999999999999999999999 8999999765
No 433
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.17 E-value=0.14 Score=46.72 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|.+|+.++..+...|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5689999999999999999999999999999765
No 434
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.15 E-value=0.14 Score=45.14 Aligned_cols=34 Identities=24% Similarity=0.212 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999865
No 435
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.13 E-value=0.14 Score=46.29 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
++|+|||||..|..++..+++.|++++++|..+.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4799999999999999999999999999997664
No 436
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.11 E-value=0.13 Score=45.14 Aligned_cols=34 Identities=12% Similarity=0.084 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
.+|.|||.|..|...|..|++.|++|+++|+.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998763
No 437
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.09 E-value=0.12 Score=44.37 Aligned_cols=34 Identities=18% Similarity=0.320 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCC-eEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIP-YVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~-v~vie~~~ 40 (395)
..+|.|||+|..|...|..|.+.|++ |.++++.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999998 88998764
No 438
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.07 E-value=0.099 Score=46.98 Aligned_cols=32 Identities=22% Similarity=0.316 Sum_probs=30.0
Q ss_pred eEEEEcCCCCHHHHHHHHHhhc------CeeEEEEecC
Q 016088 188 NVLVVGSGNSGMEIALDLANHA------AKTSLVIRSP 219 (395)
Q Consensus 188 ~v~ViG~g~~a~e~a~~l~~~g------~~v~~~~r~~ 219 (395)
+|+|||+|.+|+-+|..|++.| .+|+++.+.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6999999999999999999998 8999999875
No 439
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.04 E-value=0.13 Score=45.28 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999754
No 440
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.03 E-value=0.073 Score=50.12 Aligned_cols=33 Identities=33% Similarity=0.511 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcC--eeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~--~v~~~~r~~ 219 (395)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999999 999998754
No 441
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.02 E-value=0.087 Score=47.87 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEec
Q 016088 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~ 218 (395)
.+.+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4679999999999999999999999999999987
No 442
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=91.95 E-value=0.09 Score=49.70 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 6789999999999999999999999999998764
No 443
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.95 E-value=0.15 Score=47.50 Aligned_cols=35 Identities=26% Similarity=0.499 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
..++.|||.|..|+..|..|++.|++|+++|+.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998764
No 444
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.94 E-value=0.17 Score=45.13 Aligned_cols=34 Identities=15% Similarity=0.059 Sum_probs=30.5
Q ss_pred CCeEEEECCChHHHH-HHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLA-TAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~-~A~~l~~~~~~v~vie~~~ 40 (395)
.++|.|||.|.+|++ +|..|.++|++|++.|..+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 468999999999996 7888899999999999865
No 445
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.92 E-value=0.1 Score=48.53 Aligned_cols=34 Identities=29% Similarity=0.492 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcC-eeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAA-KTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~-~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|. +|+++.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 4579999999999999999999999 999999876
No 446
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.82 E-value=0.14 Score=47.78 Aligned_cols=33 Identities=21% Similarity=0.504 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|+..|..|++.|++|+++|+.+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999765
No 447
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=91.80 E-value=0.066 Score=50.22 Aligned_cols=34 Identities=29% Similarity=0.535 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc------CeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHA------AKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g------~~v~~~~r~~ 219 (395)
.++|+|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 358999999999999999999999 8999999864
No 448
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.76 E-value=0.15 Score=44.37 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||.|..|...|..|.+.|++|+++++.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 479999999999999999999999999999875
No 449
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.74 E-value=0.16 Score=44.75 Aligned_cols=32 Identities=31% Similarity=0.496 Sum_probs=29.5
Q ss_pred eEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
+|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999754
No 450
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=91.72 E-value=0.2 Score=44.15 Aligned_cols=41 Identities=20% Similarity=0.238 Sum_probs=32.0
Q ss_pred CCCcCCCCeEEEECC-ChHHHHHHHHHhhcCCCeEEEecCCC
Q 016088 1 MKEQAAGVEVIIVGA-GPSGLATAACLSLQSIPYVILERENC 41 (395)
Q Consensus 1 m~~~~~~~~vvIIGa-G~aGl~~A~~l~~~~~~v~vie~~~~ 41 (395)
|+......+|+|.|| |..|..++..|.++|++|+++++.+.
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 443333578999999 99999999999999999999998653
No 451
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.61 E-value=0.22 Score=41.30 Aligned_cols=34 Identities=24% Similarity=0.196 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999765
No 452
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.54 E-value=0.16 Score=45.00 Aligned_cols=34 Identities=21% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999765
No 453
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.49 E-value=0.19 Score=44.77 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=30.4
Q ss_pred CeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
.+|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999765
No 454
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.46 E-value=0.2 Score=47.21 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999765
No 455
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.43 E-value=0.2 Score=44.39 Aligned_cols=34 Identities=18% Similarity=0.363 Sum_probs=30.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|..|...|..|+..|+ +|+++|...
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 3589999999999999999999988 899999654
No 456
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.37 E-value=0.18 Score=45.43 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999998764
No 457
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.35 E-value=0.19 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.346 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|.+.|.+|+++++.+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999998764
No 458
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.35 E-value=0.23 Score=46.23 Aligned_cols=33 Identities=33% Similarity=0.576 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 579999999999999999999999999999866
No 459
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.28 E-value=0.19 Score=45.40 Aligned_cols=34 Identities=21% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|+|+|.+|..++..|+..|.+|+++++.+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 460
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.26 E-value=0.16 Score=47.67 Aligned_cols=35 Identities=14% Similarity=0.204 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-CC-CeEEEecCCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-SI-PYVILERENC 41 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-~~-~v~vie~~~~ 41 (395)
..+|.|||+|..|+..|..|++. |+ +|+++|+.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 36899999999999999999999 99 9999998764
No 461
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.23 E-value=0.21 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||.|..|+..|..|++.|++|+.+|-.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999654
No 462
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.20 E-value=0.1 Score=46.49 Aligned_cols=35 Identities=29% Similarity=0.458 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCCCHHHHHHHHHh--hcCeeEEEEecC
Q 016088 185 GGKNVLVVGSGNSGMEIALDLAN--HAAKTSLVIRSP 219 (395)
Q Consensus 185 ~~~~v~ViG~g~~a~e~a~~l~~--~g~~v~~~~r~~ 219 (395)
....|+|||+|+.|+-+|..|++ .|.+|+++.+.+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~ 100 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35679999999999999999975 589999999865
No 463
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.18 E-value=0.16 Score=46.45 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.+++|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 479999999999999999999999999999765
No 464
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.09 E-value=0.21 Score=44.33 Aligned_cols=34 Identities=18% Similarity=0.353 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999998 799998654
No 465
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=91.07 E-value=0.19 Score=44.97 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.7
Q ss_pred CeEEEEcCCCCHHHHHHHHHhhcCeeEEEEec
Q 016088 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVIRS 218 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~ 218 (395)
.++.|||+|..|.-+|..|++.|.+|+++.|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999874
No 466
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.07 E-value=0.16 Score=44.22 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=30.3
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+|.|||.|..|...|..|.+.|++|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 69999999999999999999999999999876
No 467
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.05 E-value=0.23 Score=43.96 Aligned_cols=39 Identities=31% Similarity=0.526 Sum_probs=31.8
Q ss_pred CCCcCCCCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 1 MKEQAAGVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 1 m~~~~~~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
|+.. ...+|+|||+|..|.+.|..|+..+. +++++|...
T Consensus 1 m~~~-~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNN-GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTT-TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCC-CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 5543 24689999999999999999988875 799998754
No 468
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.05 E-value=0.11 Score=48.79 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3579999999999999999999999999999876
No 469
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.04 E-value=0.28 Score=42.46 Aligned_cols=33 Identities=30% Similarity=0.386 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|+|.|+|..|...+..|.+.|++|+++++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 479999999999999999999999999999865
No 470
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.03 E-value=0.24 Score=42.53 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+++|||+|-+|.+++..|.+.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999998899998865
No 471
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=91.02 E-value=0.17 Score=48.75 Aligned_cols=34 Identities=26% Similarity=0.366 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~ 219 (395)
..+|+|||+|..|+-+|..|++ .|.+|+++.+.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 5689999999999999999999 889999999865
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=91.01 E-value=0.19 Score=47.05 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.++|+|||+|..|...+..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 5789999999999999999999999999999754
No 473
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.01 E-value=0.21 Score=44.32 Aligned_cols=33 Identities=24% Similarity=0.410 Sum_probs=29.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|+|||+|..|.+.|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 544
No 474
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.01 E-value=0.28 Score=43.38 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999765
No 475
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.99 E-value=0.13 Score=39.30 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=31.9
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++++|+|.|..|..+|..|.+.|.+|+++.+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 5789999999999999999999999999999876
No 476
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.98 E-value=0.14 Score=49.02 Aligned_cols=34 Identities=29% Similarity=0.437 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4689999999999999999999 899999999865
No 477
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.98 E-value=0.19 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.329 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999765
No 478
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.93 E-value=0.21 Score=44.04 Aligned_cols=32 Identities=28% Similarity=0.415 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 8 VEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 8 ~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
.+|+|||+|..|.+.|..|. .|.+|+++++.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999865
No 479
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=90.86 E-value=0.12 Score=47.49 Aligned_cols=33 Identities=24% Similarity=0.331 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHHhh--cCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~~--g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++. |.+|+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 5799999999999999999999 99999999865
No 480
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=90.82 E-value=0.15 Score=45.07 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=29.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhc-----C-CCeEEEec
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQ-----S-IPYVILER 38 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~-----~-~~v~vie~ 38 (395)
..+|.|||+|..|...|..|.+. | .+|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999998 9 99999987
No 481
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=90.75 E-value=0.11 Score=49.67 Aligned_cols=34 Identities=29% Similarity=0.329 Sum_probs=31.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3579999999999999999999999999999765
No 482
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=90.74 E-value=0.11 Score=48.91 Aligned_cols=34 Identities=38% Similarity=0.549 Sum_probs=31.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 6789999999999999999999999999999875
No 483
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.72 E-value=0.14 Score=47.66 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=30.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc-CeeEEEEe
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIR 217 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g-~~v~~~~r 217 (395)
..+|+|||+|.+|+-+|..|++.| .+|+++.+
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~ 55 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDA 55 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEES
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEcc
Confidence 457999999999999999999999 89999998
No 484
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.70 E-value=0.24 Score=43.91 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
..+|+|||+|..|.++|..|+..++ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999887 799998754
No 485
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.68 E-value=0.18 Score=46.91 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+|.|||+|..|+..|..|++.|++|+++|+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999754
No 486
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.68 E-value=0.16 Score=38.51 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=30.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
+.+++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999998765
No 487
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=90.67 E-value=0.14 Score=39.16 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhcCeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g~~v~~~~r~~ 219 (395)
.++++|+|+|..|..++..|.+.|.+|+++.+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 488
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.62 E-value=0.27 Score=44.61 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
...|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999765
No 489
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.57 E-value=0.2 Score=44.57 Aligned_cols=30 Identities=30% Similarity=0.212 Sum_probs=28.8
Q ss_pred eEEEECCChHHHHHHHHHhhcCCCeEEEec
Q 016088 9 EVIIVGAGPSGLATAACLSLQSIPYVILER 38 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~~~~v~vie~ 38 (395)
+|.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 490
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.53 E-value=0.27 Score=42.40 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
...++|+|+|-.|.++|..|++.|.+|+++++..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998764
No 491
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.52 E-value=0.13 Score=37.72 Aligned_cols=34 Identities=26% Similarity=0.267 Sum_probs=30.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHHhhc-CeeEEEEecC
Q 016088 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVIRSP 219 (395)
Q Consensus 186 ~~~v~ViG~g~~a~e~a~~l~~~g-~~v~~~~r~~ 219 (395)
.++++|+|+|.+|..++..|.+.| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 7899998865
No 492
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.52 E-value=0.25 Score=43.61 Aligned_cols=32 Identities=28% Similarity=0.437 Sum_probs=28.8
Q ss_pred eEEEECCChHHHHHHHHHhhc--CCCeEEEecCC
Q 016088 9 EVIIVGAGPSGLATAACLSLQ--SIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIGaG~aGl~~A~~l~~~--~~~v~vie~~~ 40 (395)
+|+|||+|..|...|..|++. +.+|+++|..+
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 67999999865
No 493
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.50 E-value=0.27 Score=40.49 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.6
Q ss_pred eEEEEC-CChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 9 EVIIVG-AGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 9 ~vvIIG-aG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+|+||| +|..|...|..|.+.|++|+++++.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999764
No 494
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.49 E-value=0.25 Score=46.55 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
+.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999765
No 495
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.47 E-value=0.28 Score=43.44 Aligned_cols=34 Identities=18% Similarity=0.327 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|..|.+.|..|+..++ +++++|..+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999988 899999765
No 496
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=90.46 E-value=0.14 Score=48.66 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=29.5
Q ss_pred CeEEEEcCCCCHHHHHHHHHh---hcCeeEEEEecC
Q 016088 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVIRSP 219 (395)
Q Consensus 187 ~~v~ViG~g~~a~e~a~~l~~---~g~~v~~~~r~~ 219 (395)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 579999999999999999999 899999999865
No 497
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.46 E-value=0.28 Score=44.59 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
...|+|||+|..|..+|..++..|.+|+++|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999765
No 498
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=90.38 E-value=0.33 Score=44.85 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCCCeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSIPYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~~v~vie~~~ 40 (395)
..+|.|||+|..|...+..+.+.|+++.++|..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5689999999999999999999999999998654
No 499
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.31 E-value=0.24 Score=42.22 Aligned_cols=34 Identities=24% Similarity=0.449 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC-CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI-PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~-~v~vie~~~ 40 (395)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999998 789998754
No 500
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.30 E-value=0.25 Score=43.40 Aligned_cols=34 Identities=26% Similarity=0.468 Sum_probs=29.8
Q ss_pred CCeEEEECCChHHHHHHHHHhhcCC--CeEEEecCC
Q 016088 7 GVEVIIVGAGPSGLATAACLSLQSI--PYVILEREN 40 (395)
Q Consensus 7 ~~~vvIIGaG~aGl~~A~~l~~~~~--~v~vie~~~ 40 (395)
..+|+|||+|..|...|..++..++ +++++|...
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999888 899999754
Done!