BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016092
(395 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 282/393 (71%), Positives = 328/393 (83%), Gaps = 6/393 (1%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR A+SRL +LK RV TRF+SS+AVA+ SGGLFSW+TG+ SSS LDFP
Sbjct: 1 MYRCASSRLSSLKARQGNRV--LTRFSSSAAVAT--KPSGGLFSWITGDTSSSVTPLDFP 56
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L V L P LPDYVEP KT+I+TL NG+K+ASE SV+P ASI LYV CGSIYE+P S+G
Sbjct: 57 LNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASYGA 116
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NRSHLRIVRE+EAIGGNV ASASRE M Y++DALKTYVP+MVE+L D
Sbjct: 117 THLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLAD 176
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
CVRNP FLDWEV EQL KVK+EISE S NPQ LLLEA+HSAGY+G N L+A E+ INR
Sbjct: 177 CVRNPAFLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYAGPYGNSLMATEATINR 236
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
LNST+LEEFVAENYT PRMVLAASGVEH++ + VAEPLLSDLP + EEPK VY GGDY
Sbjct: 237 LNSTVLEEFVAENYTAPRMVLAASGVEHEEFLKVAEPLLSDLPKVATIEEPKPVYVGGDY 296
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
RCQAD+ ++THF LAFE+PGGW +K++MTLTVLQML+GGGGSFSAGGPGKGMYSRLY
Sbjct: 297 RCQADA--EMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYL 354
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTVS 393
RVLN++PQ+ +FSAFS+IYN++G+FGIQGTT S
Sbjct: 355 RVLNQYPQIHAFSAFSSIYNNTGLFGIQGTTSS 387
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 259/389 (66%), Positives = 311/389 (79%), Gaps = 4/389 (1%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR RALKG V R R+ASSSAVA TSSS+ SWL+G ++ SLD P
Sbjct: 1 MYRTAASRARALKG-VLTRSLRPARYASSSAVAETSSSTPAYLSWLSGGSRAALTSLDMP 59
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D VEP K +I+TLPNG+KIASET+ +P ASI LYV CGSIYE+P G
Sbjct: 60 LQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGA 119
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NR+H R+VRE+EAIGGN ASASREQM Y+ DALKTYVPEMVE+LID
Sbjct: 120 THLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLID 179
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
VRNP FLDWEVNE+L K+K EI+E++ NP LLEAIHSAGYSG LA+PL APESA++R
Sbjct: 180 SVRNPAFLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYSGPLASPLYAPESALDR 239
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
LN LLEEF+ EN+T RMVLAASGVEH++L+ VAEPL SDLP++ P+ PKS Y GGD+
Sbjct: 240 LNGELLEEFMTENFTAARMVLAASGVEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDF 299
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
R +G + THF +AFE+P GW+ +K+A+T TVLQML+GGGGSFSAGGPGKGM+S LYR
Sbjct: 300 RQH--TGGEATHFAVAFEVP-GWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWLYR 356
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389
RVLNE+ +VQS +AF++I+N +G+FGI G
Sbjct: 357 RVLNEYQEVQSCTAFTSIFNDTGLFGIYG 385
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 439 bits (1129), Expect = e-122, Method: Compositional matrix adjust.
Identities = 256/391 (65%), Positives = 306/391 (78%), Gaps = 8/391 (2%)
Query: 1 MYRNAASRLRALKGHVRCRVPSATRFASSSAVASTSSSSGGLFSWLTGERSSSSPSLDFP 60
MYR AASR +ALKG + A+R+ASSSAVA++SSSS SWL+G SSS PS++ P
Sbjct: 1 MYRTAASRAKALKGILNHNF-RASRYASSSAVATSSSSS----SWLSGGYSSSLPSMNIP 55
Query: 61 LPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGT 120
L GVSLPP L D+VEP K K +TLPNG+ IA+E S +P ASI LYV CGSIYE+P G
Sbjct: 56 LAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYETPQFRGA 115
Query: 121 THLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLID 180
THLLERMAF+ST NRSH R+VRE+EAIGGN ASASREQMGY+ DALKTYVPEMVE+LID
Sbjct: 116 THLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLID 175
Query: 181 CVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINR 240
VRNP FLDWEVNE+L KVK EI E + NP LLEA+HSAGYSGALANPL APESAI
Sbjct: 176 SVRNPAFLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGALANPLYAPESAITG 235
Query: 241 LNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY 300
L +LE FV ENYT RMVLAASGV+H++L+ V EPLLSDLP++ EPKS Y GGD+
Sbjct: 236 LTGEVLENFVFENYTASRMVLAASGVDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDF 295
Query: 301 RCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
R +G + THF LAFE+P GW+ +K+A+ TVLQML+GGGGSFSAGGPGKGM+S LY
Sbjct: 296 RQH--TGGEATHFALAFEVP-GWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWLYL 352
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQGTT 391
R+LN+ Q QS +AF++++N++G+FGI G T
Sbjct: 353 RLLNQHQQFQSCTAFTSVFNNTGLFGIYGCT 383
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 161/308 (52%), Gaps = 8/308 (2%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+ + LPNG+ IAS + SPV+ I L++ GS YE + GTTHLL + +T+ S +
Sbjct: 39 EFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKGASSFK 98
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
I R +EA+GG + +A+RE M Y+ + L+ V ++E L++ P F WEV + ++
Sbjct: 99 ITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWEVADLQPQL 158
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
K + + NPQ+ ++E +H+A Y ALANPL P+ I ++ S L FV ++T RM
Sbjct: 159 KIDKAVAFQNPQTHVIENLHAAAYRNALANPLYCPDYRIGKVTSEELHYFVQNHFTSARM 218
Query: 260 VLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFEL 319
L GV H L VAE L ++ K+ Y GG+ R Q +GD L H AF
Sbjct: 219 ALIGLGVSHPVLKQVAEQFL-NMRGGLGLSGAKANYRGGEIREQ--NGDSLVH--AAFVA 273
Query: 320 PGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIY 379
+A +VLQ +LG G G S L++ V Q SAF+ Y
Sbjct: 274 ESAVAGSAEANAFSVLQHVLGAGPHVK---RGSNTTSHLHQAVAKATQQPFDVSAFNASY 330
Query: 380 NHSGMFGI 387
+ SG+FGI
Sbjct: 331 SDSGLFGI 338
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 169/328 (51%), Gaps = 10/328 (3%)
Query: 60 PLPGVSLPPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFG 119
P S P +P ++P + + + LPNG+ IAS + +P++ I L++ GS YE+ G
Sbjct: 20 PKLKTSAPGGVP--LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLG 77
Query: 120 TTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLI 179
T+HLL + +T+ S +I R +EA+GG + +A+RE M Y+ + ++ + ++E L+
Sbjct: 78 TSHLLRLASTLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLL 137
Query: 180 DCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAIN 239
+ P F WEV +++K + + NPQ+ ++E +H Y ALANPL P+ +
Sbjct: 138 NVTTAPEFRRWEVAALRSQLKIDKAVAFQNPQTRIIENLHDVAYKNALANPLYCPDYRMG 197
Query: 240 RLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGD 299
++ S L FV ++T RM L GV H L VAE L+ + K+ Y GG+
Sbjct: 198 KITSEELHYFVQNHFTSARMALVGLGVSHSILKEVAEQFLNIRGGL-GLAGAKAKYRGGE 256
Query: 300 YRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLY 359
R Q +GD L H + E + + +A +VLQ LLG G G S L
Sbjct: 257 IREQ--NGDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLS 309
Query: 360 RRVLNEFPQVQSFSAFSNIYNHSGMFGI 387
+ V Q SAF+ Y+ SG+FGI
Sbjct: 310 QSVAKGSQQPFDVSAFNASYSDSGLFGI 337
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 10/321 (3%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P ++P + + LPNG+ IAS + +P++ I L+V GS YE + GT+HLL
Sbjct: 28 PGGVP--LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPV 186
+ +T+ S +I R +EA+GG + +A+RE M Y+ + +++ + ++E L++ P
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPE 145
Query: 187 FLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 246
F WEV +++K + + N Q+ ++E +H Y ALANPL P+ + ++ S L
Sbjct: 146 FRRWEVAALRSQLKIDKAVAFQNSQTRIIENLHDVAYKNALANPLYCPDYRMGKITSEEL 205
Query: 247 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 306
FV ++T RM L GV H L VAE L ++ K+ Y GG+ R Q +
Sbjct: 206 HYFVQNHFTSARMALVGLGVSHSVLKQVAEQFL-NMRGGLGLAGAKAKYRGGEIREQ--N 262
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
GD L H + E + + +A +VLQ LLG G G S L + V
Sbjct: 263 GDNLVHAAIVAESAAIGNAEANA--FSVLQHLLGAGPHIK---RGNNTTSLLSQSVAKGS 317
Query: 367 PQVQSFSAFSNIYNHSGMFGI 387
Q SAF+ Y+ SG+FGI
Sbjct: 318 HQPFDVSAFNASYSDSGLFGI 338
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 121/316 (38%), Positives = 180/316 (56%), Gaps = 12/316 (3%)
Query: 80 KISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
K+S+L NG+K+A+ + +++ LY+ GS +E G TH+L+R+AF+ST +
Sbjct: 20 KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
+ +E +GGN Q ++SRE + Y V +M++L+ + VR P + E+ EQ
Sbjct: 80 MAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKITEQELQEQKLSA 139
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 258
+ EI EV P+ +L E +H+A YSG L +PL+ P I ++ L ++ + YT
Sbjct: 140 EYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYYLLDYRNKFYTPEN 199
Query: 259 MVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPK-SVYTGGDYRCQADS---GD--QLTH 312
V A GV H++ + + E L D S HP K + YTGG+ C + G+ +L H
Sbjct: 200 TVAAFVGVPHEKALELTEKYLGDWQSTHPPITKKVAQYTGGE-SCIPPAPVFGNLPELFH 258
Query: 313 FVLAFELPGGWHKDK-DAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+ FE G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN++ V++
Sbjct: 259 IQIGFE---GLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVEN 315
Query: 372 FSAFSNIYNHSGMFGI 387
AF++ Y+ SG+FGI
Sbjct: 316 CVAFNHSYSDSGIFGI 331
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 164/321 (51%), Gaps = 10/321 (3%)
Query: 67 PPSLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLER 126
P +P + P + + LPNG+ IAS + +P + I L++ GS YE+ + GT+HLL
Sbjct: 28 PAGVPPH--PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRL 85
Query: 127 MAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPV 186
+ +T+ S +I R +EA+GG + +++RE M Y+ + L+ V ++E L++ P
Sbjct: 86 ASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPE 145
Query: 187 FLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLL 246
F WEV +++ + + NPQ+ ++E +H+A Y ALAN L P+ I ++ L
Sbjct: 146 FRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVEL 205
Query: 247 EEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADS 306
++V ++T RM L GV H L VAE L+ + K+ Y GG+ R Q +
Sbjct: 206 HDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGL-GLSGAKAKYHGGEIREQ--N 262
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
GD L H L E + +A +VLQ +LG G G S LY+ V
Sbjct: 263 GDSLVHAALVAESAAIGSAEANA--FSVLQHVLGAGPHVKRGSNAT---SSLYQAVAKGV 317
Query: 367 PQVQSFSAFSNIYNHSGMFGI 387
Q SAF+ Y+ SG+FG
Sbjct: 318 HQPFDVSAFNASYSDSGLFGF 338
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 175/328 (53%), Gaps = 18/328 (5%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
+T+++TLPNG+++A+E+++S A++ +++ GS +ES + GT H LE M F+ T R+
Sbjct: 96 ETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHFLEHMIFKGTDRRT 155
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E+E IGG++ A SREQ Y L + V + +++L D ++N F + +N +
Sbjct: 156 VRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSKFEEQRINRER 215
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E+ EV ++L+ +H+ + L +L P + + L+ ++ +YT
Sbjct: 216 DVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITREDLQNYIKTHYT 275
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDL---PSIHPR---EEPKSVYTGGDYRCQADSGD 308
RMV+AA+G V+H+++V + L + L P+ + EP S +TG + R D
Sbjct: 276 ASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPAS-FTGSEVRM-IDDDL 333
Query: 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRV-LNEFP 367
L F +AFE G D D++ L V+Q +LG GG G S L +RV +NE
Sbjct: 334 PLAQFAVAFE--GASWTDPDSVALMVMQTMLGSWNKNVGGGKHVG--SDLTQRVAINEI- 388
Query: 368 QVQSFSAFSNIYNHSGMFGIQGTTVSHC 395
+S AF+ Y +G+FG+ + C
Sbjct: 389 -AESIMAFNTNYKDTGLFGVYAVAKADC 415
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 164/316 (51%), Gaps = 13/316 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 58 ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 117
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 118 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 177
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 178 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 237
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ + S H E P +TG + R + D L H
Sbjct: 238 PRIVLAAAGGVSHDELLELAKFHFGESLSTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 296
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 297 LAVAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 350
Query: 372 FSAFSNIYNHSGMFGI 387
F +F+ Y +G++GI
Sbjct: 351 FQSFNTSYTDTGLWGI 366
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 163/316 (51%), Gaps = 13/316 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGI 387
F +F+ Y +G++G+
Sbjct: 350 FQSFNTSYTDTGLWGL 365
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 163/316 (51%), Gaps = 13/316 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L +G+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV HD+L+ +A+ D H E P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVSHDELLDLAKFHFGDSLCTHKGEIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGI 387
F +F+ Y +G++G+
Sbjct: 350 FQSFNTSYTDTGLWGL 365
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 179/329 (54%), Gaps = 19/329 (5%)
Query: 79 TKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
T ++ LP+G+++A+ S S A++ +YV G IYE+ I G +H + +AF+ST +
Sbjct: 15 TCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATES 74
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
++++ + +GGN+ +A+RE + Y L +P V+LL D P + E+ E+
Sbjct: 75 QVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPALTEEEIAERRAT 134
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLA-PESAINRLNSTLLEEFVAENYTG 256
+ E ++ + P + + E +H+ + G L N + P+ A N + T+ E F Y
Sbjct: 135 IAFEAEDLHSRPDAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDTIREYFA--TYLH 192
Query: 257 P-RMVLAASGVEHDQLVSVAE----PLLSDLPSIHPREEPKSVYTGGDYR--------CQ 303
P RMV+A +GV H +LV + P + PS + ++ Y GG ++
Sbjct: 193 PSRMVVAGTGVAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGSHQLVIPKPPPTH 252
Query: 304 ADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVL 363
+ LTH +AF +P H D ++ LQ+L+GGGG+FSAGGPGKGMYSRLY VL
Sbjct: 253 PNYEQTLTHVQVAFPVPPFTHPDM--FPVSTLQVLMGGGGAFSAGGPGKGMYSRLYTNVL 310
Query: 364 NEFPQVQSFSAFSNIYNHSGMFGIQGTTV 392
N + ++S +AF + Y+ + +FGI + V
Sbjct: 311 NRYRWMESCAAFQHAYSSTSLFGISASCV 339
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 152 bits (384), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 169/329 (51%), Gaps = 17/329 (5%)
Query: 71 PDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAF 129
P Y++ +TKI+TL NG+++A+E + VAS+ ++V GS+YE+ + G H LE M F
Sbjct: 26 PSYLKISPETKITTLSNGIRVATEQTYGEVASVGVWVDSGSVYETDKNNGVAHFLEHMIF 85
Query: 130 RSTRNR-SHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFL 188
+ T R + I E+E +GG++ A SRE Y LK VP V++L D ++N F
Sbjct: 86 KGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNSKFE 145
Query: 189 DWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLE 247
+ ++ + SE + + ++ + +H+A + G AL +L P I + ++
Sbjct: 146 TSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITREQIQ 205
Query: 248 EFVAENYTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSV-----YTGGDYR 301
EF+ ENYTG R+V++A+G V H+QLV + +++ ++ K + G + R
Sbjct: 206 EFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGSELR 265
Query: 302 CQADSGDQLTHFVLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYR 360
+ D L HF +A LP W D D L ++Q ++G A GK + S L
Sbjct: 266 VRDDE-QPLIHFAVAVRALP--W-TDPDYFVLELIQTMIGNWNRGIAA--GKNIASNLGE 319
Query: 361 RVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389
V E +S+S F Y +G+FG G
Sbjct: 320 IVATE-DLAESYSTFFTCYQDTGLFGNYG 347
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 151 bits (382), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 170/320 (53%), Gaps = 22/320 (6%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YE+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSVLDNGLRVASEQSSHPTCTVGVWIDVGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE+IG ++ A ++RE Y AL +P++VELL D V+N D ++ ++
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNISLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + Q+++ + +H+ + G LA + P + RL+ T L ++++ +Y
Sbjct: 167 VILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTDLTDYLSRHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ GV+H QL+ +A+ S + ++ + S+ +TG + R D L
Sbjct: 227 PRMVLAAAGGVKHQQLLDLAQDHFSSVSQVYEEDAVPSITPCRFTGSEIR-HRDDALPLA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLTVLQMLLGG-----GGSFSAGGPGKGMYSRLYRRVLNEF 366
H +A E P GW + D + L V ++G GG P + V N+
Sbjct: 286 HVAIAVEGP-GW-ANPDNVALQVANAIIGHYDCTYGGGVHLSSPLASV------AVANKL 337
Query: 367 PQVQSFSAFSNIYNHSGMFG 386
QSF F+ Y+ +G+ G
Sbjct: 338 --CQSFQTFNISYSETGLLG 355
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 181/349 (51%), Gaps = 24/349 (6%)
Query: 50 RSSSSPSLDFPLPGVSLPPSLPDYVEP-GKTKISTLPNGVKIASETSVSPVASISLYVGC 108
R+ SP+L LP + + ++ +T++S L NG+++ASE S ++ +++
Sbjct: 19 RTRRSPAL-LRLPALRGTATFAQALQSVPETQVSILDNGLRVASEQSSHATCTVGVWIDA 77
Query: 109 GSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALK 168
GS YE+ + G + LE +AF+ T+NR + +EVE+IG ++ A ++RE Y AL
Sbjct: 78 GSRYETEKNNGAGYFLEHLAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALS 137
Query: 169 TYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-L 227
+P++VELL D V+N D ++ ++ + E+ E + Q+++ + +H+ + G L
Sbjct: 138 KDLPKVVELLADIVQNSSLEDSQIEKERDVILREMQENDASMQNVVFDYLHATAFQGTPL 197
Query: 228 ANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAAS-GVEHDQLVSVAEPLLSDLPSIH 286
A + P + RL+ T L +++ +Y PRMVLAA+ GVEH QL+ +A+ LS + ++
Sbjct: 198 AQAVEGPSENVRRLSRTDLTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVSRVY 257
Query: 287 PREEPKSV----YTGGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGG- 341
+ + +TG + R D L H +A E P GW + D +TL V ++G
Sbjct: 258 EEDAVPGLTPCRFTGSEIR-HRDDALPLAHVAIAVEGP-GW-ANPDNVTLQVANAIIGHY 314
Query: 342 ----GGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFG 386
GG P + V N+ QSF F+ Y+ +G+ G
Sbjct: 315 DCTYGGGVHLSSPLASV------AVANKL--CQSFQTFNISYSDTGLLG 355
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 13/316 (4%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I ++ L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV H++L+ +A+ D H + P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCAHKGDVPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGG-SFSAGGPGKGMYSRLYRRVLNEFPQVQS 371
+A E G H D + L V L+G SF G G + S+L + + S
Sbjct: 296 LAVAIEAVGWTH--PDTICLMVANTLIGNWDRSF---GGGMNLSSKLAQLTCHG-NLCHS 349
Query: 372 FSAFSNIYNHSGMFGI 387
F +F+ Y +G++G+
Sbjct: 350 FQSFNTSYTDTGLWGL 365
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 162/315 (51%), Gaps = 11/315 (3%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T+++ L NG+++ASE S ++ L++ GS YE+ + GT H LE MAF+ T+ RS
Sbjct: 57 ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
L + E+E +G ++ A SREQ Y A +P VE+L D ++N + E+ +
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTLGEAEIERERG 176
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ EV N Q ++ + +H+ Y AL +L P I +N L +++ +Y G
Sbjct: 177 VILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKDLVDYITTHYKG 236
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPK---SVYTGGDYRCQADSGDQLTH 312
PR+VLAA+ GV H++L+ +A+ D H P +TG + R + D L H
Sbjct: 237 PRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGAIPALPPCKFTGSEIRVRDDKM-PLAH 295
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
+A E G H D + L V L+G S GG G + S+L + + SF
Sbjct: 296 LAIAVEAVGWAH--PDTICLMVANTLIGNWDR-SFGG-GMNLSSKLAQLTCHG-NLCHSF 350
Query: 373 SAFSNIYNHSGMFGI 387
+F+ Y +G++G+
Sbjct: 351 QSFNTSYTDTGLWGL 365
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 155/296 (52%), Gaps = 12/296 (4%)
Query: 82 STLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIV 141
+ LPNG +IASE+ ++ +++ GS +E+ + G H LE M F+ T RS I
Sbjct: 30 NALPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQDIE 89
Query: 142 REVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKS 201
+E +G ++ A SRE Y K VPE V++L D + N + +++ + +
Sbjct: 90 FGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSKRTEQDLDAERQTIVQ 149
Query: 202 EISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINR-LNSTLLEEFVAENYTGPRM 259
E +V +L++ +HSA + G+ L +L P I + + ++++FV +YTGPRM
Sbjct: 150 EKEDVEARIDEVLMDHLHSAAFEGSGLGLSILGPLENIQKSITKGMIDDFVKTHYTGPRM 209
Query: 260 VLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFE 318
L SG V+H QL +A LP+ P+ + + GGD R + + + LTH +AF+
Sbjct: 210 ALVGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTRFLGGDKR-ETNQLNPLTHVAVAFQ 268
Query: 319 LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF--PQVQSF 372
PG H DA+ + VL+ LL GS+S G+ YS R ++ +F P+V F
Sbjct: 269 TPGISH--PDAIKIKVLEQLL---GSYSR-DKGEAAYSCFARAIVMDFYDPKVGQF 318
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 161/320 (50%), Gaps = 22/320 (6%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS YES + G + +E +AF+ T+NR
Sbjct: 47 ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + + ++ +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ G+EH QL+ +A+ S L + + ++ +TG C + G L
Sbjct: 227 PRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQI-CHREDGLPLA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLTV-----LQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
H +A E PG H D A+ + GGG S+ ++L
Sbjct: 286 HVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKL-------- 337
Query: 367 PQVQSFSAFSNIYNHSGMFG 386
QSF F+ Y +G+ G
Sbjct: 338 --CQSFQTFNICYADTGLLG 355
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 164/321 (51%), Gaps = 24/321 (7%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+T++S L NG+++ASE S P ++ +++ GS +E+ + G + LE +AF+ T+NR
Sbjct: 47 ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ +EVE++G ++ A ++RE Y AL +P+ VELL D V+N D ++ ++
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSLEDSQIEKERD 166
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E+ E + + ++ +H+ + G LA + P + +L+ L E+++ +Y
Sbjct: 167 VILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRADLTEYLSTHYKA 226
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLPSIHPREEPKSV----YTGGDYRCQADSGDQLT 311
PRMVLAA+ GVEH QL+ +A+ L +P + + ++ +TG + R D
Sbjct: 227 PRMVLAAAGGVEHQQLLDLAQKHLGGIPWTYAEDAVPTLTPCRFTGSEIR-HRDDALPFA 285
Query: 312 HFVLAFELPGGWHKDKDAMTLTVLQMLLG------GGGSFSAGGPGKGMYSRLYRRVLNE 365
H +A E P GW D + L V ++G GGG + G V N+
Sbjct: 286 HVAIAVEGP-GW-ASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGA-------VANK 336
Query: 366 FPQVQSFSAFSNIYNHSGMFG 386
QSF FS Y +G+ G
Sbjct: 337 L--CQSFQTFSICYAETGLLG 355
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+ I+TL NGV++ASE + + +Y+ GS YE+ G +H+++R+AF+ST R+
Sbjct: 51 RDNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTA 110
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
++ VE +GGN+Q ++SRE M Y +P VEL+ + +R+P D E+ Q+
Sbjct: 111 DEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKLTDEELEGQIM 170
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E++E+ + + +L E +H A + L NPLL P+ ++ +N +++ + Y
Sbjct: 171 TAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDVIQTYRDAFYRP 230
Query: 257 PRMVLAASGVEHDQLVSVAEPLLSDLPS 284
R+V+A +GV H++ V +AE D+ +
Sbjct: 231 ERLVVAFAGVPHERAVKLAEKYFGDMKA 258
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 310 LTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369
TH LAFE G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN+ V
Sbjct: 356 FTHIQLAFE--GLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNVLNQHGWV 413
Query: 370 QSFSAFSNIYNHSGMFGI 387
+S AF++ Y SG+FGI
Sbjct: 414 ESCVAFNHSYTDSGLFGI 431
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/354 (33%), Positives = 177/354 (50%), Gaps = 22/354 (6%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVS--NNPQSLLLEAIHSAGY-SGALANPL 231
V LL D V P D EV V+ E+ +++ +P+ LL E IH A Y +
Sbjct: 164 VALLADVVLQPRLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLP----SIHP 287
P + ++N +L ++ YT RMVLA GVEH+ LV A L + S
Sbjct: 224 FCPTENVAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEA 283
Query: 288 REEPKSV--YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQ 336
+ +SV YTGG + + D + +LTH ++ E ++D + VL
Sbjct: 284 VDIDRSVAQYTGGIAKLERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLN 341
Query: 337 MLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGT 390
M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I +
Sbjct: 342 MMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHAS 395
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 177/354 (50%), Gaps = 22/354 (6%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVS--NNPQSLLLEAIHSAGY-SGALANPL 231
V LL D V P D EV V+ E+ +++ +P+ LL E IH A Y +
Sbjct: 164 VGLLADVVLQPRLTDEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLP----SIHP 287
P I ++N +L ++ YT RMVLA GVEH+ LV A L + S
Sbjct: 224 FCPTENIAKINREVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEA 283
Query: 288 REEPKSV--YTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQ 336
+ +SV YTGG + + D + +LTH ++ E ++D + VL
Sbjct: 284 VDIDRSVAQYTGGIAKRERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEEDFIPFAVLN 341
Query: 337 MLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGT 390
M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I +
Sbjct: 342 MMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHAS 395
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 174/351 (49%), Gaps = 22/351 (6%)
Query: 60 PLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISF 118
PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 46 PLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLS 105
Query: 119 GTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVEL 177
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +V+L
Sbjct: 106 GIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDL 165
Query: 178 LIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPLLAP 234
L D V +P D E+ V+ E+ +++ +P+ LL E IH A + + P
Sbjct: 166 LADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCP 225
Query: 235 ESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLS------DLPSIHPR 288
I +++ +L ++ YT RMVLA GVEH+ LV A L P
Sbjct: 226 VENIAKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDV 285
Query: 289 EEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVLQMLL 339
+ + YTGG + + D + +LTH ++ E + D + VL M++
Sbjct: 286 DRSVAQYTGGIIKVERDMSNVSLGPTPIPELTHIMVGLE--SCSFLEDDFIPFAVLNMMM 343
Query: 340 GGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGT 390
GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I +
Sbjct: 344 GGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHAS 394
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 178/355 (50%), Gaps = 24/355 (6%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 44 LSSPLPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAK 103
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 104 YLSGIAHFLEKLAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 163
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPL 231
V LL D V +P D E+ V+ E+ +++ +P+ LL E +H A Y +
Sbjct: 164 VGLLADVVLHPRLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHR 223
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEP-LLSDLP------S 284
P + +++ +L ++ YT RMVLA GVEH QLV A LL P +
Sbjct: 224 FCPAENVGKMDRDVLHAYLRNYYTPDRMVLAGVGVEHAQLVECARKYLLGTCPAWGTGAA 283
Query: 285 IHPREEPKSVYTGGDYRCQADSGD---------QLTHFVLAFELPGGWHKDKDAMTLTVL 335
+H + + YTGG + + D + +LTH ++ E + D + VL
Sbjct: 284 VHV-DRSVAQYTGGIVKLERDMSNVSLGPTPFPELTHIMIGLE--SCSFLEGDFIPFAVL 340
Query: 336 QMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGT 390
M++GGGGSFSAGGPGKGM++RLY VLN + + +++ + Y +G+ I +
Sbjct: 341 NMMMGGGGSFSAGGPGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHAS 395
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 15/319 (4%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +AS+ S + +++ +++ GS E+ + GT H LE +AF+ T R+
Sbjct: 39 KTQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRT 98
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
++ E+E +G ++ A SRE Y AL VP+ V++L D ++N + + +
Sbjct: 99 QQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKLEESAIERER 158
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV + ++ + +H+ Y L +L P I + T L ++ NYT
Sbjct: 159 DVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTELVNYIKNNYT 218
Query: 256 GPRMVLA-ASGVEHDQLVSVAEPLLSDLPSIHP------REEPKSVYTGGDYRCQADSGD 308
RMVL A GV H+QLV +A+ S LP+ P + K + G D R + D+
Sbjct: 219 ADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGSDIRIRDDT-- 276
Query: 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQ 368
+ +A + G D D T V Q ++G P +G S+L V ++
Sbjct: 277 -IPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQG--SKLSGFV-HKHDL 332
Query: 369 VQSFSAFSNIYNHSGMFGI 387
SF +FS Y+ +G++GI
Sbjct: 333 ATSFMSFSTSYSDTGLWGI 351
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 131 bits (329), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 158/319 (49%), Gaps = 11/319 (3%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
+ + L NGV + + + +YV GS YE+ G +H ++R+AF++T
Sbjct: 53 EVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQATERTPV 112
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ ++E +GGN S SRE M Y V M +LL + V P + ++
Sbjct: 113 GEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKIQEDDLVHYRD 172
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E SE+ P +LL E H + + L N LL +N + +T + E++ Y
Sbjct: 173 SIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATSIREYLKYFYRP 232
Query: 257 PRMVLAASGVEHDQLVSVAEPLLSDLPS--IHPREEPKSVYTGGDYRCQADSG------D 308
+ LA +G+ + + + L LPS + P E S YTGG +
Sbjct: 233 EHLTLAYAGIPQEIAKEITKELYGHLPSSSLPPLEAIPSHYTGGFMGIKKSEAPPVPYQQ 292
Query: 309 QLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQ 368
+ TH V+A E G D D L LQ LLGGGGSFSAGGPGKGMYSRLY VLN++P
Sbjct: 293 EFTHVVIAME--GLPVTDPDIYALACLQFLLGGGGSFSAGGPGKGMYSRLYLNVLNQYPW 350
Query: 369 VQSFSAFSNIYNHSGMFGI 387
V++ AF++ Y SG+FG+
Sbjct: 351 VETCMAFNHSYTDSGLFGM 369
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 173/349 (49%), Gaps = 11/349 (3%)
Query: 51 SSSSPSLDFPLPGVSLPPSLPDYVEPG-KTKISTLPNGVKIASETSVSPVASISLYVGCG 109
S+ P+L+ + S S+ D + + +++TL NG ++ +E + S A++ +++ G
Sbjct: 9 SALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVGVWIETG 68
Query: 110 SIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKT 169
S +E+ + G H LER+ + T R+ + E+ AIG + + R+Q A
Sbjct: 69 SRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQ 128
Query: 170 YVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LA 228
V ++V++L D +RN ++ + + E+ + Q +L + +H+AG+ G LA
Sbjct: 129 DVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLA 188
Query: 229 NPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPR 288
+L +I +++ L+E+ ++Y RMVL+A G + S+A+ DL + +PR
Sbjct: 189 LSVLGTSESIPNISAQQLKEWQEDHYRPVRMVLSAVGGGVSNVSSLADKYFGDLSNEYPR 248
Query: 289 EEPK---SVYTGGDYRCQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSF 345
+ P+ + +TG +YR + D + H AF + G + KDA+ L + +G
Sbjct: 249 KVPQVDGTRFTGSEYRYR---NDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVT 305
Query: 346 SAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQGTTVSH 394
A + SRL +++ ++ V + F+ Y +G+FGI +H
Sbjct: 306 HA--TSRTAASRLVQKIGHDHG-VHNLQHFNINYKDTGLFGIYFVADAH 351
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 78 KTKISTLPNGVKIASETSVS-PVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+++ LPNG+ +A+E++ + A++ +++ GS E+ + G H LE ++F+ T+ R+
Sbjct: 34 KTQVTRLPNGLTVATESNPALATATVGVWIDSGSRAETKANNGVAHFLEHISFKGTKQRT 93
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E+E +GG++ A SREQ Y V + V +L D ++N ++ +
Sbjct: 94 QSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLDPGAIDRER 153
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGY-SGALANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV + ++ + +H+A + AL +L P+ I L+ L+ ++ NYT
Sbjct: 154 AVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQAYIKNNYT 213
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREE-PKSVYTGGDYRCQADSGDQLT-H 312
RMV+ +G V+H +L +AE LP + + + +TG D R + D D T H
Sbjct: 214 ADRMVVVGAGNVDHAELCKLAETNFGKLPQGSGKAKFVRPAFTGSDVRIRVD--DMPTAH 271
Query: 313 FVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
LA E G D L V ++ GS+ G S +++ + SF
Sbjct: 272 IALAVE--GASWTSADHWPLLVASAMI---GSYDRAA-GNAHPSSKLAQIVAKHNLANSF 325
Query: 373 SAFSNIYNHSGMFGI 387
++F+ Y+ +G++GI
Sbjct: 326 TSFNTTYSDTGLWGI 340
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 18/320 (5%)
Query: 79 TKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
T+ISTL NG+ +A+E+ + A++ +++ GS E+ + GT H LE MAF+ T RS
Sbjct: 29 TEISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQ 88
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
+ EVE IG ++ A SREQ Y + VP V+++ D ++N + +
Sbjct: 89 HALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKLESGAIERERD 148
Query: 198 KVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTG 256
+ E EV + ++ + +H+ + G L +L P++ I + L ++ NYT
Sbjct: 149 VILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDDLASYIQTNYTA 208
Query: 257 PRMVLAAS-GVEHDQLVSVAEPLLSDLP-SIHP------REEPKSVYTGGDYRCQADSGD 308
RMVL + GV+H LV +AE S LP S +P E K + G + R + D
Sbjct: 209 DRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVGSEARIR---DD 265
Query: 309 QLTHFVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFP 367
+L +A + G GW D + V+Q + G++ + S +++
Sbjct: 266 ELPTAHVAIAVEGVGW-SSPDYFPMMVMQSIF---GNWDRSLGASSLLSSRLSHIISSNS 321
Query: 368 QVQSFSAFSNIYNHSGMFGI 387
SF +FS Y+ +G++GI
Sbjct: 322 LANSFMSFSTSYSDTGLWGI 341
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 175/361 (48%), Gaps = 36/361 (9%)
Query: 57 LDFPLPGVSLPP-SLPDYVEPGKTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESP 115
L PLPGV P + D E +TK++TL NG+++AS+ ++ + + GS YE+
Sbjct: 43 LSSPLPGVPKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAK 102
Query: 116 ISFGTTHLLERMAFRST-RNRSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEM 174
G H LE++AF ST R S I+ +E GG SR+ Y+ A + +
Sbjct: 103 YLSGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTV 162
Query: 175 VELLIDCVRNPVFLDWEVNEQLTKVKSEISEVSN--NPQSLLLEAIHSAGY-SGALANPL 231
V LL D V +P D E+ V+ E+ +++ +P+ LL E IH A + +
Sbjct: 163 VGLLADVVLHPRLTDEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHR 222
Query: 232 LAPESAINRLNSTLLEEFVAENYTGPRMVLAASGVEHDQLVSVAEPLLSDLPSIHPRE-E 290
P I +++ +L ++ YT RMVLA GVEH+ LV A L + P
Sbjct: 223 FCPVENIGKIDREVLHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLL---GVQPAWGA 279
Query: 291 PKSVYT---------GGDYR----CQADSGD----QLTHFVLAFELPGGWHK----DKDA 329
P +V+ GG R CQ + Q +H GG + ++D
Sbjct: 280 PGAVWMLTAQWHSTRGGSSRWRETCQMSALRPPRFQSSHIY------GGARELLLLEEDF 333
Query: 330 MTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGMFGIQG 389
+ VL M++GGGGSFSAGGPGKGM+SRLY VLN + + +++ + Y +G+ I
Sbjct: 334 IPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHA 393
Query: 390 T 390
+
Sbjct: 394 S 394
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 78 KTKISTLPNGVKIASETS-VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRS 136
KT+ +TL NG+ +A+E + A++ + V GS E+ + G H LE +AF+ T+NRS
Sbjct: 21 KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80
Query: 137 HLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL 196
+ E E G ++ A SREQ Y A K VP V +L D + N V +
Sbjct: 81 QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSISASAVERER 140
Query: 197 TKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
+ E EV ++ + +H+ Y G L +L P+ I L L +++ +NY
Sbjct: 141 QVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTREDLLQYIKDNYR 200
Query: 256 GPRMVLAASG-VEHDQLVSVAEPLLSDL-PSIH------PRE-EPKSVYTGGDYRCQADS 306
RM+++++G + H++LV +AE L PS PR +P+ + G + R + D
Sbjct: 201 SDRMIISSAGSISHEELVKLAEKYFGHLEPSAEQLSLGAPRGLKPR--FVGSEIRARDDD 258
Query: 307 GDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEF 366
+A + G K D T V+Q ++G A G + SRL ++ +
Sbjct: 259 SPTAN---IAIAVEGMSWKHPDYFTALVMQAIIGNWD--RAMGASPHLSSRL-STIVQQH 312
Query: 367 PQVQSFSAFSNIYNHSGMFGI 387
SF +FS Y+ +G++GI
Sbjct: 313 QLANSFMSFSTSYSDTGLWGI 333
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 8/235 (3%)
Query: 78 KTKISTLPNGVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSH 137
K +ISTLPNG+++ S+ + V +I LY+ G+ YESP G +LLE+M F+ T+N S
Sbjct: 143 KAEISTLPNGIRVVSKQTHEGVCAIGLYINAGTKYESPQDRGVFNLLEKMTFKETKNNST 202
Query: 138 LRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLT 197
I++E+E I N AS+SRE + S + L+ + ++ +L D +++P + + E+ EQ+
Sbjct: 203 SEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPTYSEEELREQIE 262
Query: 198 KVKSEISEVSN-NPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYT 255
++N + L+ E + + A L N ++A + L + + + Y
Sbjct: 263 VCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATPEQYQNITREKLFDALRKYYV 322
Query: 256 GPRMVLAASGVEHDQLVSVAEPLLSDLPSIH---PREEPKS---VYTGGDYRCQA 304
G +V++ +G EH Q++ + + D+P P E+ Y GG C A
Sbjct: 323 GKNIVISVTGAEHSQVIELVDKYFGDIPFTQKDTPSEDSIDSTITYKGGTDACVA 377
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 325 KDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYNHSGM 384
++KD + VLQ LLGGG S+S GGPGKGM SRL V+ +V++ AF ++N +
Sbjct: 463 ENKDIINGLVLQSLLGGGSSYSTGGPGKGMQSRLNLNVVYSSHRVKNCHAFLFVFNKVSL 522
Query: 385 FGIQGTTVS 393
FGI TT S
Sbjct: 523 FGISLTTQS 531
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/329 (29%), Positives = 154/329 (46%), Gaps = 17/329 (5%)
Query: 76 PGKTKISTLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRN 134
PG T+ S LPNG+ IA+E + A++ ++V GS E+ + GT H LE +AF+ T+N
Sbjct: 24 PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQN 82
Query: 135 RSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNE 194
RS I E+E IG ++ A SRE Y +L+ +P+ V++L D + V + +
Sbjct: 83 RSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIER 142
Query: 195 QLTKVKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAEN 253
+ + E EV ++ + +H Y L +L P I + T L++++ +N
Sbjct: 143 ERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKN 202
Query: 254 YTGPRMVLAASG-VEHDQLVSVAEPLLSDLPSIH-------PREEPKSVYTGGDYRCQAD 305
Y G RMVLA +G V+H++LV A+ +P PR P V+ G+ R +
Sbjct: 203 YKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPR-GPLPVFCRGE-RFIKE 260
Query: 306 SGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNE 365
+ TH +A E G D Q ++G A G G S L
Sbjct: 261 NTLPTTHIAIALE--GVSWSAPDYFVALATQAIVGNWD--RAIGTGTNSPSPLAVAASQN 316
Query: 366 FPQVQSFSAFSNIYNHSGMFGIQGTTVSH 394
S+ +FS Y SG++G+ T S+
Sbjct: 317 GSLANSYMSFSTSYADSGLWGMYIVTDSN 345
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 19/315 (6%)
Query: 81 ISTLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ + + V VA I+L GS YE+ G +H LE MAF+ T R+
Sbjct: 7 ISKLKNGLTVLTYNMPYVDSVA-INLITKVGSRYENSEEEGISHFLEHMAFKGTTTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E + IGG+ A E+ Y L + + +L D ++N +F + E+ ++
Sbjct: 66 QIAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSIFAEEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E +S+ Y L P+L ++ F+ ++Y
Sbjct: 126 ILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEHFLSFIDKHYNAG 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G V+HD++VS AE L S L + Y GG+ D + T +L
Sbjct: 186 NLYLSVAGNVDHDKIVSSAERLFSSLKQGEKSNFLPAKYIGGNSFINKDL--EQTTLILG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTPYINLERLYRTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTT 391
+ Y+ SG+F I +T
Sbjct: 292 STYSDSGVFTIYAST 306
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 19/315 (6%)
Query: 81 ISTLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L GS YE+P G H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGSRYENPGEEGIAHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG+ A E+ Y L + + ++ D V+N F + E+ ++
Sbjct: 66 QIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSAFAEEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E +++ + L P+L I N +F ++Y
Sbjct: 126 ILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDHFLKFTGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
L+ +G V+H+++V AE L S L + Y GG D + T +L
Sbjct: 186 NFYLSIAGNVDHEEIVKEAERLFSSLTQGEKSNFSPAKYIGGHSFINKDL--EQTTLILG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLERLYQTQLLAIIFGG----------GMSSRLFQHIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTT 391
+ Y SG+F I +T
Sbjct: 292 SPYFDSGVFTIYAST 306
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 33/326 (10%)
Query: 77 GKTKISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRN 134
G + +TLP G++I +ET SV A+ ++ GS E+P G TH LE + F+ TR
Sbjct: 33 GTVRRTTLPGGLRIVTETLPSVRS-ATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRK 91
Query: 135 RSHLRIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNE 194
RS L I ++A+GG + A ++E Y L T +P ++++ D + + + +V+
Sbjct: 92 RSALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSLIQEEDVDV 151
Query: 195 QLTKVKSEISEVSNNPQSLLLEAI-HSAGYSGALANPLLAPESAINRLNSTLLEEFVAEN 253
+ + EI+ ++P + + H+ AL P+L +N L + + F ++
Sbjct: 152 ERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADRIRRFYRKH 211
Query: 254 YTGPRMVLAASG-VEHDQLV-----------SVAEPLLSDLPSIHPREEPKSVYTGGDYR 301
Y +V+AA+G V+H+++V ++ +P L PR ++V G
Sbjct: 212 YDPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLA---PRAGRRTVRAAGRVE 268
Query: 302 CQADSGDQLTHFVLAFELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRR 361
+Q H +L +PG D+ + VL LGG GM SRL++
Sbjct: 269 LIGRKTEQ-AHVILG--MPGLARTDERRWAMGVLNTALGG-----------GMSSRLFQE 314
Query: 362 VLNEFPQVQSFSAFSNIYNHSGMFGI 387
V + S ++++ + G+FG+
Sbjct: 315 VREKRGLAYSVYSYTSGFADCGLFGV 340
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 19/315 (6%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
IS L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 ISKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG A E Y L + + +L D ++N +F D E++++
Sbjct: 66 QIAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSIFADEEISKEYQI 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y L +L + + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEHFLNFIGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVIIAEELFASLKQGVTSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE + +K T +L ++ GGG S SRL++ + + +++
Sbjct: 244 FECTSYINLEKLYQTY-LLSIIFGGGVS-----------SRLFQSIREKLGLAYVVGSYN 291
Query: 377 NIYNHSGMFGIQGTT 391
+ Y SG+F I +T
Sbjct: 292 SAYFDSGVFTIYAST 306
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 20/321 (6%)
Query: 82 STLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLR 139
+TL NG+K+ S P S+ LY+ GS E+ + G +L+ +AF S N+ +
Sbjct: 25 TTLSNGLKVVSLVGGYTGPAVSLGLYIKTGSRNETQETAGLNQVLKGLAFESNTNKLGIE 84
Query: 140 IVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKV 199
+ R++E G A ASR+ + + L +M+ L + + P EV + +
Sbjct: 85 VQRDIEVSGSTAFAQASRDNLLIALQTLPNRSLQMLNNLANITK-PTLPYHEVRDVTEII 143
Query: 200 KSEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPR 258
E +++ S + E++H + G L PL+AP + + + +V Y
Sbjct: 144 VKESEAYNHDSYSSIFESVHQTAFRGKTLGRPLVAPICNLGNITKDAVTNWVNSTYKPSN 203
Query: 259 MVLAASGVEHDQLVSVAEPLL--SDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
M+L G+ H++L+ AE + +D S E Y GG+ + SG+ + VLA
Sbjct: 204 MILVGVGLSHNELIEEAEKVTFGNDESSTSISNETAQ-YIGGE-SLKYSSGN--SKVVLA 259
Query: 317 FELPGGWHKD-KDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAF 375
FE G + KD +VLQ +LG G +A PG G SRL+ N V S AF
Sbjct: 260 FE--GTAQSNIKDVAAFSVLQSILGNGCPKTA--PGHGRTSRLFSLTKNNSNIVNS-EAF 314
Query: 376 SNIYNHSGMFG----IQGTTV 392
+ Y SG+FG ++G TV
Sbjct: 315 NLTYGDSGLFGVVAEVEGATV 335
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 19/315 (6%)
Query: 81 ISTLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVHSVA-INLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQ 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I E ++IGG A E Y L + + +L D ++N +F D E+ ++
Sbjct: 66 QIAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSIFADEEIAKEYQI 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y G L +L + F+ ++Y
Sbjct: 126 IMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEHFLNFIGKHYNAE 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G +EH+++V +AE L + L + Y GG + + T VL
Sbjct: 186 NLYLSIAGNIEHNKIVMIAEELFASLKQGVKSSFIPAKYIGGKGFIHKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE + + T +L ++ GG GM SRL++ + + +++
Sbjct: 244 FECTSYINLGQLYQTY-LLSIIFGG-----------GMSSRLFQSIREKLGLAYVVGSYN 291
Query: 377 NIYNHSGMFGIQGTT 391
+ Y SG+F I +T
Sbjct: 292 SAYFDSGVFTIYAST 306
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 19/315 (6%)
Query: 81 ISTLPNGVKIASETS--VSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+S L NG+ I + V+ VA I+L G+ YE+ G +H LE MAF+ T+ R+
Sbjct: 7 VSKLKNGLTILTYNMPYVNSVA-INLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAK 65
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
+I +AIGG+ A E Y L + + +L D ++N +F D E+ ++
Sbjct: 66 QIAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSIFSDEEIAKEYQV 125
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
+ EI+ +NP L+ E ++ Y L +L + F+ + Y
Sbjct: 126 IMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEHFFNFIDKYYNAA 185
Query: 258 RMVLAASG-VEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLA 316
+ L+ +G ++HD++V +AE L S L + Y GG+ + + T VL
Sbjct: 186 NLYLSIAGNIDHDKIVIIAEQLFSSLKQGVKSSFIPAKYIGGNGFINKEL--EQTSLVLG 243
Query: 317 FELPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFS 376
FE G + + + + T L ++ GG GM SRL++ + + + +++
Sbjct: 244 FE--GTSYINLEKLYQTHLLSIIFGG----------GMSSRLFQSIREKLGLAYAVGSYN 291
Query: 377 NIYNHSGMFGIQGTT 391
+ Y SG+F I +T
Sbjct: 292 SAYFDSGVFTIYAST 306
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 26/318 (8%)
Query: 80 KISTLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+ +TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS +
Sbjct: 16 RRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAV 75
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
I + ++A+GG + A ++E Y L + +P V+L+ D V N +V +
Sbjct: 76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDV 135
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
V EI+ ++P+ L + +A + + P++ +++ + L+ F YT
Sbjct: 136 VLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPE 195
Query: 258 RMVLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QL 310
RMV+AA+G V+HD LV++ L+ + PR+ V G R S D +
Sbjct: 196 RMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQ 253
Query: 311 THFVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369
TH L PG GW + L+VL LGG G+ SRL++ V
Sbjct: 254 THVSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLA 299
Query: 370 QSFSAFSNIYNHSGMFGI 387
S + +++ SG +
Sbjct: 300 YSVYSALDLFADSGALSV 317
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 146/318 (45%), Gaps = 26/318 (8%)
Query: 80 KISTLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHL 138
+ +TLP G+++ +E AS+ ++VG GS E G H LE + F+ST RS +
Sbjct: 16 RRTTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAV 75
Query: 139 RIVREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTK 198
I + ++A+GG + A ++E Y L + +P V+L+ D V N +V +
Sbjct: 76 DIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGRCAADDVEVERDV 135
Query: 199 VKSEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGP 257
V EI+ ++P+ L + +A + + P++ +++ + L+ F YT
Sbjct: 136 VLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQLQSFHLRRYTPE 195
Query: 258 RMVLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGD-QL 310
RMV+AA+G V+HD LV++ L+ + PR+ V G R S D +
Sbjct: 196 RMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRV--NGSPRLTLVSRDAEQ 253
Query: 311 THFVLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQV 369
TH L PG GW + L+VL LGG G+ SRL++ V
Sbjct: 254 THVSLGIRTPGRGW---EHRWALSVLHTALGG-----------GLSSRLFQEVRETRGLA 299
Query: 370 QSFSAFSNIYNHSGMFGI 387
S + +++ SG +
Sbjct: 300 YSVYSALDLFADSGALSV 317
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 24/315 (7%)
Query: 82 STLPNGVKIASE-TSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
+TLP G+++ +E AS+ ++VG GS E G H LE + F+ST R+ + I
Sbjct: 25 TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDI 84
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
+ ++A+GG + A ++E Y L + + V+L+ D V N +V + V
Sbjct: 85 AQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGRCAVDDVELERDVVL 144
Query: 201 SEISEVSNNPQSLLLEAIHSAGYSGA-LANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
EI+ ++P+ L + +A + + P++ +++ + T L F YT RM
Sbjct: 145 EEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQLHSFHVRRYTPERM 204
Query: 260 VLAASG-VEHDQLVSVAEP-----LLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHF 313
V+A +G V+HD++V++ L+ S PR+ + GG + TH
Sbjct: 205 VVAVAGNVDHDEMVALVREHFGSRLIRGRQSAPPRKSTGRI-NGGPALTLGKRDAEQTHV 263
Query: 314 VLAFELPG-GWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
+L PG W + L+VL LGG G+ SRL++ + S
Sbjct: 264 LLGVRTPGRSW---EHRWALSVLHTALGG-----------GLSSRLFQEIRETRGLAYSV 309
Query: 373 SAFSNIYNHSGMFGI 387
+ +I+ SG +
Sbjct: 310 YSALDIFADSGALSV 324
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 139/319 (43%), Gaps = 32/319 (10%)
Query: 83 TLPNGVKIASET--SVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
T NGV+I E +V VA I +++G GS +E+P G +H LE M F+ T +S I
Sbjct: 6 TCQNGVRIVLENNPTVRSVA-IGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAREI 64
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
+ IGG V A S+E Y L + +++L D + F + E+ ++ V
Sbjct: 65 AESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHSTFDENELKKEKNVVY 124
Query: 201 SEISEVSNNPQSLLLEAIHSAGYSG-ALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
EI + P ++ + + A Y +L P+L E + N L +++ + YT R+
Sbjct: 125 EEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDSLRQYMHDYYTPDRV 184
Query: 260 VLAASGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDY------RCQADSGDQLTHF 313
V++ +G ++++ + D+ E K TG + + + H
Sbjct: 185 VISVAG-------NISDSFIKDVEKWFGSYEAKGKATGLEKPEFHTEKLTRKKETEQAHL 237
Query: 314 VLAFE-LPGGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSF 372
L F+ L G + D L VL +LGG M SRL++ V + S
Sbjct: 238 CLGFKGLEVGHERIYD---LIVLNNVLGG-----------SMSSRLFQDVREDKGLAYSV 283
Query: 373 SAFSNIYNHSGMFGIQGTT 391
++ + Y SGM I G T
Sbjct: 284 YSYHSSYEDSGMLTIYGGT 302
>sp|P83782|QCR2_CANAL Cytochrome b-c1 complex subunit 2, mitochondrial OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=QCR2 PE=1
SV=2
Length = 374
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 11/227 (4%)
Query: 82 STLPNGVKIASETSVSPVASISLYVG-CGSIYESPISFGTTHLLERMAFRSTRNRSHLRI 140
S++PN VKIA++ S + + +S+ + GS G +HLL + F + +S LR
Sbjct: 11 SSIPNSVKIAAKESATDLTKLSVIINNAGSKTGKS---GVSHLLSKFTFLNNGAKSALRF 67
Query: 141 VREVEAIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVK 200
RE E +GG ++ +R+ + + LK +P VE L + V N F E NE +
Sbjct: 68 TRESELLGGTFESKVTRDALILNTTFLKQDLPYYVEALGNVVSNTQFAPHEFNEIVLPTA 127
Query: 201 SEISEVSN-NPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRM 259
+ ++++N NP +E +H + L NPL ES +L + +F E ++G +
Sbjct: 128 NAETKLANANPAFKGVEKLHEITFRRGLGNPLFYNESTPIKLEE--VAQFSKEQFSGENI 185
Query: 260 VLAASGVEHDQLVS-VAEPLLSDLPSIH---PREEPKSVYTGGDYRC 302
+ A G + L V+E LPS + P + +TG + R
Sbjct: 186 SIVAEGANEEDLTKFVSESAFCYLPSSSSNGAKALPTNTFTGQEARV 232
>sp|P78761|QCR2_SCHPO Cytochrome b-c1 complex subunit 2, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr2 PE=2 SV=2
Length = 426
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 18/261 (6%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GV A + + S+S+ + GS Y+ G +HLLE+ AF++T RS LRI RE E
Sbjct: 30 GVSFAGRETPTATGSLSVVINAGSRYQPDA--GVSHLLEKFAFKTTEERSALRITRESEL 87
Query: 147 IGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQL---TKVKSEI 203
+GG + +RE + + L Y+ LL + V FL +++ E++ +++SE+
Sbjct: 88 LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVVDATKFLPFQLTEEVLPTARIESEL 147
Query: 204 SEVSNNPQSLLLEAIHSAGYSGALANPLLAPESAINRLNSTLLEEFVAENYTGPRMVLAA 263
+ + + +H + + N + P SA ++ +++F ++ Y + +
Sbjct: 148 --FREDILRVAMAKLHEKAFHRGIGNEVYLPASASPSISE--IKDFASKAYVKSNFSVIS 203
Query: 264 SGVEHDQLVSVAEPLLSDLPSIHPREEPKSVYTGGDYRCQADSGDQLTHFVLAFELPGGW 323
SG + + + + +P P + + + G+ R + + +F L F P
Sbjct: 204 SGPDVQKASDLCAKYFAVIPDGSPLKSAPTKISSGESRVYSKGTN---YFCLGFPAPAAS 260
Query: 324 HKDKDAMTLTVLQMLLGGGGS 344
+ L VL +LGG +
Sbjct: 261 PE------LFVLSSILGGDAA 275
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 23/310 (7%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYESPISFGTTHLLERMAFRSTRNRSHLRIVREVEA 146
GVK+AS P +++ G+ YE P+ G T LE AF++T R+ LRI RE E
Sbjct: 46 GVKVASRDDSGPTTRLAVVAKAGTRYE-PLP-GLTVGLEEFAFKNTNKRTALRITRESEL 103
Query: 147 IGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKSEISEV 206
+GG +QA +RE + L+ +P ELL + + + E +E + E +
Sbjct: 104 LGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYTTHEFHELVENCIHE-KQA 162
Query: 207 SNNPQSLLLEAIHSAGYSGALANPLL----APESAINRLNSTLLEEFVAENYTGPRMVLA 262
+ ++ L+A H+ + L +PL P S+ LN + F Y + +
Sbjct: 163 KLDSAAIALDAAHNVAFHSGLGSPLYPTVDTPTSSY--LNENSVAAFANLAYNKANIAVV 220
Query: 263 ASGVEHDQLVSVAEPLLSDLPSIHP--REEPKSVYTGGDYRCQADSGDQLTHFVLAFELP 320
A G L EP +P+ S Y GG+ R + + + V+AF P
Sbjct: 221 ADGASQAGLEKWVEPFFKGVPATSSGNLNTAASKYFGGEQRVAKNGKNAI---VIAF--P 275
Query: 321 GGWHKDKDAMTLTVLQMLLGGGGSFSAGGPGKGMYSRLYRRVLNEFPQVQSFSAFSNIYN 380
G T +VL LLGG + PG +S L + P ++F A + Y+
Sbjct: 276 GASLGVPHPET-SVLVGLLGGVSNIK-WSPG---FSLLAKATAAN-PGAEAF-AHNYAYS 328
Query: 381 HSGMFGIQGT 390
+G+ IQ T
Sbjct: 329 DAGLLAIQIT 338
>sp|Q6C2E3|QCR2_YARLI Cytochrome b-c1 complex subunit 2, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=QCR2 PE=3 SV=1
Length = 417
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 87 GVKIASETSVSPVASISLYVGCGSIYES-PISFGTTHLLERMAFRSTRNRSHLRIVREVE 145
GVK+A++ SP++ +S+ + GS Y + P G +H+LE+ AF++T +S LR VRE+E
Sbjct: 22 GVKVAAQDGQSPISDLSVVLRGGSRYATVP---GVSHILEKFAFQNTVPKSALRFVRELE 78
Query: 146 AIGGNVQASASREQMGYSFDALKTYVPEMVELLIDCVRNPVFLDWEVNEQLTKVKS-EIS 204
GG + +RE + LK +P V+ + ++ F +E+ E++ V ++
Sbjct: 79 LFGGKLYTHTTREHIVLRTQFLKQDLPYFVDAFANVLKETKFQQFELTERVAPVAELDLL 138
Query: 205 EVSNNPQSLLLEAIHSAGYSGALANPLLA 233
+ ++P LEA H + L N + A
Sbjct: 139 KRESDPAFTALEAAHEVAFRTGLGNSVYA 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,785,751
Number of Sequences: 539616
Number of extensions: 6289966
Number of successful extensions: 22520
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 22180
Number of HSP's gapped (non-prelim): 228
length of query: 395
length of database: 191,569,459
effective HSP length: 120
effective length of query: 275
effective length of database: 126,815,539
effective search space: 34874273225
effective search space used: 34874273225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)