BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016098
(395 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 249
Query: 254 WGH 256
W H
Sbjct: 250 WCH 252
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 9 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 68
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 69 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 128
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 129 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 188
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 189 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 248
Query: 254 WGH 256
W H
Sbjct: 249 WCH 251
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 249
Query: 254 WGH 256
W H
Sbjct: 250 WCH 252
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 249
Query: 254 WGH 256
W H
Sbjct: 250 WCH 252
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 11 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 70
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYVDRGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 71 RIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 130
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 131 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 190
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 191 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 250
Query: 254 WGH 256
W H
Sbjct: 251 WCH 253
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYV+RGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 249
Query: 254 WGH 256
W H
Sbjct: 250 WCH 252
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 434 bits (1115), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/243 (83%), Positives = 219/243 (90%)
Query: 14 LDEQIAQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
LD+ I QL +CK LSE +V+ LCEKAKEIL ESNVQ V+ PVT+CGD+HGQFHDL ELF
Sbjct: 10 LDQWIEQLNECKQLSESQVKSLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELF 69
Query: 74 RIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGF 133
RIGGK PDTNYLFMGDYV+RGYYSVETVTLLV+LKVRY +RITILRGNHESRQITQVYGF
Sbjct: 70 RIGGKSPDTNYLFMGDYVNRGYYSVETVTLLVALKVRYRERITILRGNHESRQITQVYGF 129
Query: 134 YDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEV 193
YDECLRKYGNANVWK FTDLFDY PLTALV+ +IFCLHGGLSPSI+TLD+IR DR+QEV
Sbjct: 130 YDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEV 189
Query: 194 PHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYN 253
PHEGPMCDLLWSDPDDR GWGISPRGAGYTFGQDISE FNH N L L++RAHQLVMEGYN
Sbjct: 190 PHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYN 249
Query: 254 WGH 256
W H
Sbjct: 250 WCH 252
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 247 AHQVVEDGYEF 257
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 247 AHQVVEDGYEF 257
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 9 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 68
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 69 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 128
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 129 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 187
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 188 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 247
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 248 AHQVVEDGYEF 258
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 246 AHQVVEDGYEF 256
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 8 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 67
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 68 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 127
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 128 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 186
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 187 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 246
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 247 AHQVVEDGYEF 257
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 246 AHQVVEDGYEF 256
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 14 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 73
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 74 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 133
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 134 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 192
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 193 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 252
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 253 AHQVVEDGYEF 263
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQCK--------PLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
NLD I +L++ + L+E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 7 NLDSIIGRLLEVQGSRPGKNVQLTENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 66
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 67 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 126
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 127 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 185
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 186 RRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 245
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 246 AHQVVEDGYEF 256
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/251 (48%), Positives = 175/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQC---KP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ KP L E E+R LC K++EI + + + +++P+ ICGDIHG
Sbjct: 3 NIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHG 62
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q++DL LF GG P++NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 63 QYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 122
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R+Y N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 123 ASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 181
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ +F H ++L LI R
Sbjct: 182 RRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICR 241
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 242 AHQVVEDGYEF 252
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 174/251 (69%), Gaps = 10/251 (3%)
Query: 13 NLDEQIAQLMQ---CKP-----LSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHG 64
N+D I +L++ C+P ++E EVR LC K++EI + + + +++P+ ICGDIHG
Sbjct: 10 NVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHG 69
Query: 65 QFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHES 124
Q+ DL LF GG P+ NYLF+GDYVDRG S+ET+ LL++ K++YP+ +LRGNHE
Sbjct: 70 QYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 129
Query: 125 RQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNI 184
I ++YGFYDEC R++ N +WK FTD F+ P+ A+V+ +IFC HGGLSP +++++ I
Sbjct: 130 ASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQI 188
Query: 185 RNFDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIAR 243
R R +VP G +CDLLWSDPD D GWG + RG +TFG D+ +F + ++L LI R
Sbjct: 189 RRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICR 248
Query: 244 AHQLVMEGYNW 254
AHQ+V +GY +
Sbjct: 249 AHQVVEDGYEF 259
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 146/243 (60%), Gaps = 11/243 (4%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 106
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 107 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 166
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY + V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 167 KIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 225
Query: 198 PMCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVM 249
PMCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 226 PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQD 285
Query: 250 EGY 252
GY
Sbjct: 286 AGY 288
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 19 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGK 78
A LM+ L E + + IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 29 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 88
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 89 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 148
Query: 139 RKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 149 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 207
Query: 199 MCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVME 250
MCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 208 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDA 267
Query: 251 GY 252
GY
Sbjct: 268 GY 269
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 19 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGK 78
A LM+ L E + + IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 35 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 94
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 95 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 154
Query: 139 RKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 155 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 213
Query: 199 MCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVME 250
MCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 214 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDA 273
Query: 251 GY 252
GY
Sbjct: 274 GY 275
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 145/243 (59%), Gaps = 11/243 (4%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 51 AHLMKEGRLEESVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 109
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 110 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 169
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 170 KIKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 228
Query: 198 PMCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVM 249
PMCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 229 PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQD 288
Query: 250 EGY 252
GY
Sbjct: 289 AGY 291
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 19 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGK 78
A LM+ L E + + IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 28 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 87
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 88 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 147
Query: 139 RKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 148 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 206
Query: 199 MCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVME 250
MCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 207 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDA 266
Query: 251 GY 252
GY
Sbjct: 267 GY 268
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 141/242 (58%), Gaps = 9/242 (3%)
Query: 19 AQLMQCKPLSEQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGK 78
A LM+ L E + + IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 48 AHLMKEGRLEESVALRIITEGASILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGGS 107
Query: 79 CPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDECL 138
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 108 PANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECK 167
Query: 139 RKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGP 198
KY V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P GP
Sbjct: 168 IKYSE-RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGP 226
Query: 199 MCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVME 250
MCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 227 MCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDA 286
Query: 251 GY 252
GY
Sbjct: 287 GY 288
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 207 bits (527), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/243 (45%), Positives = 146/243 (60%), Gaps = 11/243 (4%)
Query: 19 AQLMQCKPLSEQ-EVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGG 77
A LM+ L E +R++ E A IL E N+ + +PVT+CGDIHGQF DL +LF +GG
Sbjct: 31 AHLMKEGRLEETVALRIITEGAS-ILRQEKNLLDIDAPVTVCGDIHGQFFDLMKLFEVGG 89
Query: 78 KCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQRITILRGNHESRQITQVYGFYDEC 137
+T YLF+GDYVDRGY+S+E V L +LK+ YP+ + +LRGNHE R +T+ + F EC
Sbjct: 90 SPANTRYLFLGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQEC 149
Query: 138 LRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG 197
KY + V+ D FD PL AL+ + C+HGGLSP I TLD+IR DR +E P G
Sbjct: 150 KIKY-SERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYG 208
Query: 198 PMCDLLWSDPDDRCGWGISP--------RGAGYTFGQDISEQFNHTNNLKLIARAHQLVM 249
PMCD+LWSDP + G + RG Y + +F NNL I RAH+
Sbjct: 209 PMCDILWSDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQD 268
Query: 250 EGY 252
GY
Sbjct: 269 AGY 271
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 215 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 274
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 275 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 333
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN 233
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG D+++ F
Sbjct: 334 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 393
Query: 234 HTNNLKLIARAHQLVMEGYNWGH 256
NNL I R+H++ EGY H
Sbjct: 394 EENNLDYIIRSHEVKAEGYEVAH 416
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 71 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 130
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 131 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 189
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN 233
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG D+++ F
Sbjct: 190 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 249
Query: 234 HTNNLKLIARAHQLVMEGYNWGH 256
NNL I R+H++ EGY H
Sbjct: 250 EENNLDYIIRSHEVKAEGYEVAH 272
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 187 bits (476), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 128/203 (63%), Gaps = 3/203 (1%)
Query: 56 VTICGDIHGQFHDLAELFRIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+T+CGD HGQF+DL +F + G +TN Y+F GD+VDRG +SVE + L K+ YP
Sbjct: 62 ITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGSFSVEVILTLFGFKLLYPDH 121
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGL 174
+LRGNHE+ + Q+YGF E KY A ++++F+++F++ PL + ++ +HGGL
Sbjct: 122 FHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVLIMHGGL 180
Query: 175 -SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFN 233
S TLD+IR +R ++ P GPMCDLLWSDP + G IS RG FG D+++ F
Sbjct: 181 FSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPDVTKAFL 240
Query: 234 HTNNLKLIARAHQLVMEGYNWGH 256
NNL I R+H++ EGY H
Sbjct: 241 EENNLDYIIRSHEVKAEGYEVAH 263
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%), Gaps = 4/211 (1%)
Query: 46 ESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKC-PDTNYLFMGDYVDRGYYSVETVTLL 104
E+N P +++CGD HGQF+D+ LFR GK P YLF GD+VDRG +S E L
Sbjct: 57 ENNSTP-DVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGSWSCEVALLF 115
Query: 105 VSLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVE 164
LK+ +P + RGNHES ++YGF DEC KY + ++ F F+ PL L+
Sbjct: 116 YCLKILHPNNFFLNRGNHESDNXNKIYGFEDECKYKY-SQRIFNXFAQSFESLPLATLIN 174
Query: 165 SEIFCLHGGL-SPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYT 223
++ HGGL S TL + +N DR + P +G +LLW+DP + G G S RG G+
Sbjct: 175 NDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLWADPQEANGXGPSQRGLGHA 234
Query: 224 FGQDISEQFNHTNNLKLIARAHQLVMEGYNW 254
FG DI+++F N L+ I R+H+L G +
Sbjct: 235 FGPDITDRFLRNNKLRKIFRSHELRXGGVQF 265
>pdb|1G5B|A Chain A, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|B Chain B, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
pdb|1G5B|C Chain C, Bacteriophage Lambda SerTHR PROTEIN PHOSPHATASE
Length = 221
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 56 VTICGDIHGQFHDLA-ELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYPQR 114
+ + GD+HG + +L +L IG + +GD VDRG +VE + L + +P
Sbjct: 15 IWVVGDLHGCYTNLMNKLDTIGFDNKKDLLISVGDLVDRGAENVECLEL-----ITFPW- 68
Query: 115 ITILRGNHESRQITQVYGFYDECLRKYGNANVW 147
+RGNHE I + L + GN N W
Sbjct: 69 FRAVRGNHEQMMI--------DGLSERGNVNHW 93
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O82|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine
pdb|3O83|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O83|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
2-(4-N-Dodecyl-1,2,
3-Triazol-1-Yl)-5'-O-[n-(2-Hydroxybenzoyl)
Sulfamoyl]adenosine
pdb|3O84|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3O84|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-Phenyl-1-(Pyridin-4-Ylmethyl)-1h-Pyrazolo[3,
4-B]pyridine-4- Carboxylic Acid.
pdb|3U16|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U16|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzyloxy)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid.
pdb|3U17|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
pdb|3U17|B Chain B, Structure Of Base N-Terminal Domain From Acinetobacter
Baumannii Bound To
6-(P-Benzoyl)phenyl-1-(Pyridin-4-Ylmethyl)-1h-
Pyrazolo[3,4- B]pyridine-4-Carboxylic Acid
Length = 544
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 15 DEQIAQLMQCKPLS-EQEVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELF 73
DEQI Q +P+S + E++++ E+ +E+ E + + P T CG H+ +++F
Sbjct: 355 DEQIFT-TQGRPISSDDEIKIVDEQYREVPEGEIGMLATRGPYTFCGYYQSPEHN-SQVF 412
Query: 74 RIGGKCPDTNYLFMGDYVDR 93
+ NY + GD V R
Sbjct: 413 D------EDNYYYSGDLVQR 426
>pdb|2QJC|A Chain A, Crystal Structure Of A Putative Diadenosine
Tetraphosphatase
Length = 262
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 52 VKSPVTICGDIHGQFHDLAELFR-IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSL 107
V V I GDIHG L +L R + K + +GD V++G S V LL L
Sbjct: 17 VTGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGPDSFGVVRLLKRL 73
>pdb|1JS9|A Chain A, Brome Mosaic Virus
pdb|1JS9|B Chain B, Brome Mosaic Virus
pdb|1JS9|C Chain C, Brome Mosaic Virus
Length = 189
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 299 VHPITVIAVGTWRPSWKLTTARATHSFSLSLPQEEESQ 336
+ I ++ W S TA+AT++ S++LP E S+
Sbjct: 43 IKAIAGYSISKWEASSDAITAKATNAMSITLPHELSSE 80
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,110,059
Number of Sequences: 62578
Number of extensions: 491528
Number of successful extensions: 1059
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 37
length of query: 395
length of database: 14,973,337
effective HSP length: 101
effective length of query: 294
effective length of database: 8,652,959
effective search space: 2543969946
effective search space used: 2543969946
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)