BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016102
(395 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P35055|HEM6_SOYBN Coproporphyrinogen-III oxidase, chloroplastic OS=Glycine max GN=CPX
PE=2 SV=1
Length = 385
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/395 (79%), Positives = 335/395 (84%), Gaps = 11/395 (2%)
Query: 1 MPPTTAVSASSSFTLFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTTTTIRAAVSIE 60
M + VSA S FR S T T I + R + P+ M +RA VSIE
Sbjct: 2 MHCASIVSAPSYAFPFR-----SGSASTTPTAISLTKRSWKPPPS--MAKGPVRATVSIE 54
Query: 61 KETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKED 120
KETPE RP TFLR D+ +SS+S VRARFEKMIR+AQD+VC A+E DGG +FKED
Sbjct: 55 KETPEANRPETFLRGVDEAQSSTS----VRARFEKMIREAQDTVCSALEAADGGAQFKED 110
Query: 121 VWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAA 180
VWSRPGGGGGISRVLQDGA+WEKAGVNVSVVYGVMPP+AYRAAK +D+KPGP+PFFAA
Sbjct: 111 VWSRPGGGGGISRVLQDGAVWEKAGVNVSVVYGVMPPDAYRAAKGVPTDQKPGPVPFFAA 170
Query: 181 GISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 240
GISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTDLTPAYIFEEDVKHFH
Sbjct: 171 GISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFH 230
Query: 241 STQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATEC 300
S QK ACDKF+PTFYPRFKKWCDDYFYIKHRGERRGLGG+FFDDLNDYDQEMLLSFATEC
Sbjct: 231 SIQKQACDKFEPTFYPRFKKWCDDYFYIKHRGERRGLGGIFFDDLNDYDQEMLLSFATEC 290
Query: 301 ANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 360
ANSVIPAY+PIIEKRKD PF D KAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL
Sbjct: 291 ANSVIPAYLPIIEKRKDLPFNDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESIL 350
Query: 361 VSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VSLPLTARWEYDH P+EGSEEWKLLDACINPKEWI
Sbjct: 351 VSLPLTARWEYDHKPEEGSEEWKLLDACINPKEWI 385
>sp|Q9LR75|HEM6_ARATH Coproporphyrinogen-III oxidase, chloroplastic OS=Arabidopsis
thaliana GN=CPX PE=1 SV=1
Length = 386
Score = 631 bits (1628), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/352 (85%), Positives = 322/352 (91%), Gaps = 1/352 (0%)
Query: 44 PTFKMTTTTIRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDS 103
P +R +VSIEKE PETERP TFLR+SDD + SSS+SSVRARFE MIR AQDS
Sbjct: 36 PIRNKPNLALRCSVSIEKEVPETERPFTFLRDSDDV-TPSSSSSSVRARFETMIRAAQDS 94
Query: 104 VCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAA 163
VC AIE +GG KFKEDVWSRPGGGGGISRVLQDG ++EKAGVNVSVVYGVMPPEAYRAA
Sbjct: 95 VCDAIEAIEGGPKFKEDVWSRPGGGGGISRVLQDGNVFEKAGVNVSVVYGVMPPEAYRAA 154
Query: 164 KAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGG 223
K +ASD+KPGP+PFFAAG+SSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGG
Sbjct: 155 KGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGG 214
Query: 224 TDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFD 283
TD TPAYIFEEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFD
Sbjct: 215 TDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHRDERRGLGGIFFD 274
Query: 284 DLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYD 343
DLNDYDQEMLLSFATECANSV+PAYIPI+EKRKD FT+QHKAWQQLRRGRYVEFNLVYD
Sbjct: 275 DLNDYDQEMLLSFATECANSVVPAYIPIVEKRKDMEFTEQHKAWQQLRRGRYVEFNLVYD 334
Query: 344 RGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
RGTTFGLKTGGRIESILVSLPL+ARWEYDH P+EG+EEWKLLDACINPKEWI
Sbjct: 335 RGTTFGLKTGGRIESILVSLPLSARWEYDHKPEEGTEEWKLLDACINPKEWI 386
>sp|Q42946|HEM6_TOBAC Coproporphyrinogen-III oxidase, chloroplastic OS=Nicotiana tabacum
GN=CPX PE=2 SV=1
Length = 397
Score = 602 bits (1553), Expect = e-171, Method: Compositional matrix adjust.
Identities = 301/392 (76%), Positives = 330/392 (84%), Gaps = 6/392 (1%)
Query: 8 SASSSFT-LFRVPSSWSTKLKPTTTYIQIPNRFFPKHPTFKMTT--TTIRAAVSIEKETP 64
SAS S+T + P SW + T + +P F + T K T + + IEKE
Sbjct: 8 SASCSWTPTSQFPHSWHSSPSFLTKPLNLP--FTESYKTAKRPTPNYSFKVQAMIEKEVA 65
Query: 65 ETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSR 124
+ +P FLRESD + +S++SSVR RFEKM R+AQDSVC AIEK DGG KFKEDVWSR
Sbjct: 66 VSHKPDAFLRESDMGSNVTSNSSSVRGRFEKMRREAQDSVCLAIEKADGGAKFKEDVWSR 125
Query: 125 PGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAAS-DEKPGPIPFFAAGIS 183
PGGGGG S VLQDGA++EKAGVNVSVVYGVMPPEAYRAA+ + + KPGPIPFFAAG+S
Sbjct: 126 PGGGGGHSSVLQDGAVFEKAGVNVSVVYGVMPPEAYRAARPTDNGNVKPGPIPFFAAGVS 185
Query: 184 SVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQ 243
SVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFEEDVKHFHS Q
Sbjct: 186 SVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDFTPAYIFEEDVKHFHSVQ 245
Query: 244 KSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANS 303
K+ACDKFD +FYPRFKKWC DYFYIKHR ERRGLGG+FFDD NDYDQEMLLSF+TECANS
Sbjct: 246 KAACDKFDASFYPRFKKWCVDYFYIKHRDERRGLGGIFFDDFNDYDQEMLLSFSTECANS 305
Query: 304 VIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL 363
VIPAYIPI+EKRKDTPFTD+HKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL
Sbjct: 306 VIPAYIPIVEKRKDTPFTDKHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSL 365
Query: 364 PLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
PLTARWEYDH P+EG+EEWKLLDACINPKEWI
Sbjct: 366 PLTARWEYDHKPEEGTEEWKLLDACINPKEWI 397
>sp|Q7XPL2|HEM6_ORYSJ Coproporphyrinogen-III oxidase, chloroplastic OS=Oryza sativa
subsp. japonica GN=CPX PE=2 SV=2
Length = 399
Score = 600 bits (1546), Expect = e-171, Method: Compositional matrix adjust.
Identities = 285/351 (81%), Positives = 312/351 (88%), Gaps = 12/351 (3%)
Query: 53 IRAAVSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTD 112
+RA+V+IEKETPE+E PPTFLRE + S + + SVR RFE MIR Q VC A+E+ D
Sbjct: 51 VRASVAIEKETPESEPPPTFLRE----DGSGAGSGSVRERFEAMIRRVQGEVCAALEEAD 106
Query: 113 G-GGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAK------- 164
G G +F EDVWSRPGGGGGISRVLQDG ++EKAGVNVSVVYGVMPP+AYRAAK
Sbjct: 107 GSGARFVEDVWSRPGGGGGISRVLQDGRVFEKAGVNVSVVYGVMPPDAYRAAKGEAGKNG 166
Query: 165 AAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGT 224
AAA K GP+PFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPRQWWFGGGT
Sbjct: 167 AAADGPKAGPVPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGT 226
Query: 225 DLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDD 284
DLTP+YI EEDVKHFHS QK ACDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFDD
Sbjct: 227 DLTPSYIIEEDVKHFHSVQKQACDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDD 286
Query: 285 LNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDR 344
LNDYDQEMLL+FATECA+SV+PAYIPIIE+RKDTPFT++HKAWQQLRRGRYVEFNLVYDR
Sbjct: 287 LNDYDQEMLLNFATECADSVVPAYIPIIERRKDTPFTEEHKAWQQLRRGRYVEFNLVYDR 346
Query: 345 GTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
GTTFGLKTGGRIESILVSLPLTARW+YDH P+EG+EE KLLDACINPKEW+
Sbjct: 347 GTTFGLKTGGRIESILVSLPLTARWQYDHTPEEGTEERKLLDACINPKEWL 397
>sp|Q42840|HEM6_HORVU Coproporphyrinogen-III oxidase, chloroplastic OS=Hordeum vulgare
GN=CPX PE=2 SV=1
Length = 391
Score = 550 bits (1417), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/345 (77%), Positives = 291/345 (84%), Gaps = 10/345 (2%)
Query: 57 VSIEKETPETERPPTFLRESDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGK 116
V+IEKE PE E P TFLRE + S + + SVR RFE MIR Q +C A+E+ DG GK
Sbjct: 51 VAIEKEVPEKEAPTTFLRE----DGSGAGSGSVRERFEGMIRRVQGEICAALEEADGSGK 106
Query: 117 -FKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAA-----SDE 170
F EDVWSRPGG SRVLQDG ++EKAGVNVS V GV P AYRAAK AA
Sbjct: 107 RFVEDVWSRPGGVCVHSRVLQDGNVFEKAGVNVSAVIGVCPRSAYRAAKGAAKNGAADGH 166
Query: 171 KPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAY 230
K GP+PFF+AGISSVLHPKNPFAPTLHFNYRYFETDAPKD PGAPR WWFGGGTDLTP+Y
Sbjct: 167 KAGPVPFFSAGISSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRSWWFGGGTDLTPSY 226
Query: 231 IFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQ 290
+ EEDVKHFHS QK CDKFDP+FYPRFKKWCDDYFYIKHR ERRGLGG+FFDDLNDYDQ
Sbjct: 227 LIEEDVKHFHSVQKQTCDKFDPSFYPRFKKWCDDYFYIKHRNERRGLGGIFFDDLNDYDQ 286
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
+MLL+FATECA SVIPAYIPIIE+RKDTPF ++ KAWQQ+RRGRYVEFNLVYDRGTTFGL
Sbjct: 287 DMLLNFATECAGSVIPAYIPIIERRKDTPFNEEQKAWQQVRRGRYVEFNLVYDRGTTFGL 346
Query: 351 KTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
KTGGRIESILVSLPLTARWEYDH P+EGSEEWKLLDACINPKEW+
Sbjct: 347 KTGGRIESILVSLPLTARWEYDHKPEEGSEEWKLLDACINPKEWL 391
>sp|Q9V3D2|HEM6_DROME Coproporphyrinogen-III oxidase OS=Drosophila melanogaster GN=Coprox
PE=1 SV=1
Length = 390
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 178/321 (55%), Positives = 229/321 (71%), Gaps = 7/321 (2%)
Query: 78 DKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDG-GGKFKEDVWSRPGGGGGISRVLQ 136
D ++ ++R R E +I + Q C+A+E + G KFK D W RP GGGGI+ VLQ
Sbjct: 74 DSKALLGDKENMRHRMEILIMEIQAEFCRALEAEENCGQKFKVDRWERPEGGGGITCVLQ 133
Query: 137 DGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGP-IPFFAAGISSVLHPKNPFAPT 195
DG ++EKAGVN+SVV G +PP A + +A + K G +PFFA+G+S+V+HP+NP PT
Sbjct: 134 DGDVFEKAGVNISVVTGSLPPAAVQQMRARGKNLKEGASLPFFASGVSAVIHPRNPHVPT 193
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+HFNYRYFE + K +QWWFGGGTDLTP Y+ E+D HFH T KSACD+ DPT+Y
Sbjct: 194 IHFNYRYFEVETAK----GEKQWWFGGGTDLTPYYLCEKDASHFHQTLKSACDEHDPTYY 249
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKR 315
PRFKKWCDDYF IKHR E RG+GG+FFDD++ +QE +F + CA +VIP+Y+P++ K
Sbjct: 250 PRFKKWCDDYFRIKHRNESRGIGGIFFDDIDSPNQEAAFNFVSSCARAVIPSYVPLVRKH 309
Query: 316 KDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHN 374
K+ + + + WQ LRRGRYVEFNL+YDRGT FGL T G R ESIL+SLPL ARWEY H
Sbjct: 310 KNREYGNNERQWQLLRRGRYVEFNLIYDRGTKFGLYTPGARYESILMSLPLHARWEYMHE 369
Query: 375 PKEGSEEWKLLDACINPKEWI 395
PK SEE KL+ NPK+W+
Sbjct: 370 PKSQSEEGKLMKVLKNPKDWV 390
>sp|P36551|HEM6_HUMAN Coproporphyrinogen-III oxidase, mitochondrial OS=Homo sapiens
GN=CPOX PE=1 SV=3
Length = 454
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 173/310 (55%), Positives = 222/310 (71%), Gaps = 7/310 (2%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E +I + Q VCQA+ + DGG F D W R GGGGIS VLQDG ++EKAGV++
Sbjct: 148 MKTKMELLILETQAQVCQALAQVDGGANFSVDRWERKEGGGGISCVLQDGCVFEKAGVSI 207
Query: 149 SVVYGVMPPEAYRAAKAAAS--DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA + ++ K G +PF A G+SSV+HPKNP APT+HFNYRYFE +
Sbjct: 208 SVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVE 267
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
+QWWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 268 EADGN----KQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYF 323
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E + F CA +V+P+YIP+++K D FT Q K
Sbjct: 324 FIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKL 383
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHNPKEGSEEWKLL 385
WQQLRRGRYVEFNL+YDRGT FGL T G RIESIL+SLPLTARWEY H+P E S+E ++L
Sbjct: 384 WQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPSENSKEAEIL 443
Query: 386 DACINPKEWI 395
+ +P++W+
Sbjct: 444 EVLRHPRDWV 453
>sp|Q3B7D0|HEM6_RAT Coproporphyrinogen-III oxidase, mitochondrial OS=Rattus norvegicus
GN=Cpox PE=2 SV=1
Length = 443
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/310 (56%), Positives = 219/310 (70%), Gaps = 7/310 (2%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E MI + Q VC+A+ + DG F D W R GGGGI+ VLQDG ++EKAGVN+
Sbjct: 137 MKTKMELMIMETQAQVCRALAQVDGVADFSVDRWERKEGGGGITCVLQDGRVFEKAGVNI 196
Query: 149 SVVYGVMPPEAYRA--AKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA ++ A +K G +PF A GISSV+HPKNP+APT+HFNYRYFE +
Sbjct: 197 SVVHGNLSEEAANQMRSRGKALKKKDGKLPFTAMGISSVIHPKNPYAPTMHFNYRYFEVE 256
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
WWFGGG DLTP Y+ ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 257 EAD----GKMHWWFGGGCDLTPTYLNREDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYF 312
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E F CA +V+P+Y+PI++K D +T Q K
Sbjct: 313 FIAHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPQDKL 372
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHNPKEGSEEWKLL 385
WQQLRRGRYVEFNLVYDRGT FGL T G RIESIL+SLPLTARWEY H+P E S+E ++L
Sbjct: 373 WQQLRRGRYVEFNLVYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPPENSKEAEIL 432
Query: 386 DACINPKEWI 395
+ +PK+W+
Sbjct: 433 EVLRHPKDWV 442
>sp|P36552|HEM6_MOUSE Coproporphyrinogen-III oxidase, mitochondrial OS=Mus musculus
GN=Cpox PE=1 SV=2
Length = 443
Score = 358 bits (918), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 216/310 (69%), Gaps = 7/310 (2%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNV 148
++ + E MI + Q VC+A+ + DG F D W R GGGGI+ VLQDG ++EKAGV++
Sbjct: 137 MKTKMELMIMETQAQVCRALAQVDGVADFTVDRWERKEGGGGITCVLQDGRVFEKAGVSI 196
Query: 149 SVVYGVMPPEAYRAAKAAAS--DEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
SVV+G + EA + K +PF A G+SSV+HPKNP+APT+HFNYRYFE +
Sbjct: 197 SVVHGNLSEEAANQMRGRGKTLKTKDSKLPFTAMGVSSVIHPKNPYAPTMHFNYRYFEVE 256
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
WWFGGG DLTP Y+ +ED HFH T K ACD+ P YP+FKKWCDDYF
Sbjct: 257 EADGNT----HWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDIYPKFKKWCDDYF 312
Query: 267 YIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKA 326
+I HRGERRG+GG+FFDDL+ +E F CA +V+P+Y+PI++K D +T + K
Sbjct: 313 FIVHRGERRGIGGIFFDDLDSPSKEEAFRFVKTCAEAVVPSYVPIVKKHCDDSYTPRDKL 372
Query: 327 WQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHNPKEGSEEWKLL 385
WQQLRRGRYVEFNL+YDRGT FGL T G RIESIL+SLPLTARWEY H+P E S+E ++L
Sbjct: 373 WQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWEYMHSPPENSKEAEIL 432
Query: 386 DACINPKEWI 395
+ +PK+W+
Sbjct: 433 EVLRHPKDWV 442
>sp|P11353|HEM6_YEAST Coproporphyrinogen-III oxidase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HEM13 PE=1 SV=2
Length = 328
Score = 336 bits (861), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/320 (51%), Positives = 211/320 (65%), Gaps = 17/320 (5%)
Query: 89 VRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPG-GGGGISRVLQDGAIWEKAGVN 147
+R + E +IR Q + Q +E D KF D W+R GGGG S V+QDG +EK GVN
Sbjct: 12 IRQQMEALIRRKQAEITQGLESIDTV-KFHADTWTRGNDGGGGTSMVIQDGTTFEKGGVN 70
Query: 148 VSVVYGVMPPEAYRAAKA------AASDEKPG-----PIPFFAAGISSVLHPKNPFAPTL 196
VSVVYG + P A A KA D K G + FFA G+S V+HP NP APT
Sbjct: 71 VSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTT 130
Query: 197 HFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYP 256
H NYRYFET + G P+ WWFGGG DLTP+Y++EED + FH K A DK D YP
Sbjct: 131 HLNYRYFET---WNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYP 187
Query: 257 RFKKWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRK 316
RFKKWCD+YFYI HR E RG+GG+FFDD ++ D + +L +C ++ +P+Y+ I+++RK
Sbjct: 188 RFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRK 247
Query: 317 DTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHNP 375
D P+T + + WQ +RRGRYVEFNL+YDRGT FGL+T G R+ESIL+SLP A W Y+H+P
Sbjct: 248 DMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWLYNHHP 307
Query: 376 KEGSEEWKLLDACINPKEWI 395
GS E KLL+ P+EW+
Sbjct: 308 APGSREAKLLEVTTKPREWV 327
>sp|Q5N3S5|HEM6_SYNP6 Coproporphyrinogen-III oxidase, aerobic OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemF
PE=3 SV=1
Length = 342
Score = 325 bits (832), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/336 (48%), Positives = 212/336 (63%), Gaps = 41/336 (12%)
Query: 87 SSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGV 146
S R R ++ ++ QD +C +E DGGG+F+ED W RP GGGG SRV+++G ++E+ GV
Sbjct: 16 SDSRERVKQFMQTLQDEICAGLEALDGGGQFREDSWERPEGGGGRSRVIREGNVFEQGGV 75
Query: 147 NVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETD 206
N S V+G P + A A+ +FA G S VLHP+NP+ PT+H NYRYFE
Sbjct: 76 NFSEVWGEKLPPSILAQYPEAAGHG-----YFATGTSMVLHPRNPYIPTVHLNYRYFE-- 128
Query: 207 APKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYF 266
A WWFGGG DLTP Y F ED KHFHS+ K+ACD+ P FY FK WCD+YF
Sbjct: 129 -------AGPVWWFGGGADLTPYYPFAEDAKHFHSSFKAACDRHYPQFYDVFKLWCDEYF 181
Query: 267 YIKHRGERRGLGGLFFD------DL---------------------NDYDQEMLLSFATE 299
++KHRGE RG+GG+FFD DL +D + E L +FA +
Sbjct: 182 FLKHRGETRGIGGIFFDYQDGRGDLYNKGPAPSGPAGQKAAEVGIVSDLNWEKLFAFAQD 241
Query: 300 CANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESI 359
C + +PAY PI+E+RKDTP+ D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESI
Sbjct: 242 CGRTFLPAYSPIVERRKDTPWGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESI 301
Query: 360 LVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
L+SLP RWEY + P+ GS E +L D + P++W+
Sbjct: 302 LMSLPPLVRWEYMYQPEAGSREQELYDVFLKPQDWV 337
>sp|Q9UTE2|HEM6_SCHPO Probable coproporphyrinogen-III oxidase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=hem13 PE=3 SV=1
Length = 312
Score = 319 bits (818), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/316 (49%), Positives = 207/316 (65%), Gaps = 9/316 (2%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S + + + EK+I D Q + +E DG KF +D W++ GG GIS V+QDG ++
Sbjct: 2 SDITVEPIGKQMEKLILDVQQEIVAGLEAVDGQ-KFFQDKWTKGEGGYGISCVIQDGNVF 60
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKA--AASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFN 199
EK GVN S+V G + +A + +A D +PFFAAGIS V+HP+NP APT H N
Sbjct: 61 EKGGVNTSIVQGKLNQDAVQRMRANHEGIDRTAKELPFFAAGISMVIHPRNPMAPTTHLN 120
Query: 200 YRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFK 259
YRYFE + WWFGGG DLTP+ +FEED KHFH K ACD+ DPTFYPRFK
Sbjct: 121 YRYFELV----NSDGKKIWWFGGGADLTPSILFEEDGKHFHKLHKEACDRHDPTFYPRFK 176
Query: 260 KWCDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTP 319
KW D+YF IKHR E RG+GG+FFDDL++ D + L +F +CA++ +PAY+PI+EKRK+
Sbjct: 177 KWADEYFLIKHRKETRGIGGIFFDDLSEKDPQELFAFVKDCAHTFLPAYVPIMEKRKNME 236
Query: 320 FTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKT-GGRIESILVSLPLTARWEYDHNPKEG 378
FT+ K +Q +RRG Y EFN++YDRGT FGL+ R+ESIL++LPL A W Y + PK+
Sbjct: 237 FTEDDKEFQLIRRGYYAEFNVMYDRGTWFGLQAPEPRVESILMTLPLHASWRYKYEPKQE 296
Query: 379 SEEWKLLDACINPKEW 394
+ LL P EW
Sbjct: 297 RHK-ALLKVTHTPIEW 311
>sp|Q8DL15|HEM6_THEEB Coproporphyrinogen-III oxidase, aerobic OS=Thermosynechococcus
elongatus (strain BP-1) GN=hemF PE=3 SV=2
Length = 338
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 206/342 (60%), Gaps = 41/342 (11%)
Query: 81 SSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAI 140
+S++ S R R ++D QD +CQ +E DGG +F+ED W RP GGGG SRV+++G +
Sbjct: 7 ASTAVPSDSRQRVATFLKDLQDQICQGLEAADGGAQFQEDTWQRPEGGGGRSRVMKNGQL 66
Query: 141 WEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNY 200
E+ GVN S V+G P + A + A+ F+A G S VLHP+NP+ PT+H NY
Sbjct: 67 LEQGGVNFSEVWGEQLPPSILAQRPEAAG-----YGFYATGTSMVLHPRNPYVPTVHLNY 121
Query: 201 RYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKK 260
RYFE A WWFGGG DLTP Y F ED KHFH ++ACD+ +YP FK+
Sbjct: 122 RYFE---------AGPVWWFGGGADLTPYYPFAEDAKHFHQVHQAACDRHHREYYPVFKR 172
Query: 261 WCDDYFYIKHRGERRGLGGLFFDDLNDYDQEM---------------------------L 293
WCD+YFY+KHRGE RG+GG+FFD + D+E+ L
Sbjct: 173 WCDEYFYLKHRGETRGVGGIFFDYQDGSDRELYRGPNPDGEAARYSQRVGSIGSRSWEDL 232
Query: 294 LSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTG 353
+F C + + AY+PI+E+R+ + D+ + +Q RRGRYVEFNLVYDRGT FGL+T
Sbjct: 233 FAFIQSCGQAFLEAYLPIVERRRHLTYGDRERQFQLYRRGRYVEFNLVYDRGTIFGLQTN 292
Query: 354 GRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
GR ESIL+SLP RWEY + P+ S E +L + P++W+
Sbjct: 293 GRTESILMSLPPLVRWEYGYTPEPNSREAELYSTFLKPQDWV 334
>sp|Q7NEK3|HEM6_GLOVI Coproporphyrinogen-III oxidase, aerobic OS=Gloeobacter violaceus
(strain PCC 7421) GN=hemF PE=3 SV=1
Length = 289
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 147/298 (49%), Positives = 200/298 (67%), Gaps = 15/298 (5%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMP 156
++ QD++ +E DG G+F ED+W R GGGG SR+L +G ++E+AG+ S V+G
Sbjct: 1 MQSLQDNITSRLEAVDGEGRFVEDLWEREEGGGGRSRILTEGRVFERAGIGFSEVHGSHL 60
Query: 157 PEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPR 216
P + + A PF+ G S VLHP+NP+ PT+H NYRYFE A
Sbjct: 61 PPSILQQRPEAEGH-----PFYVTGTSMVLHPRNPYVPTVHLNYRYFE---------AGP 106
Query: 217 QWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRG 276
WWFGGG DLTP Y F ED HFH+T K+ACD DP +YPRFKKWCD+YFY+KHR E RG
Sbjct: 107 VWWFGGGADLTPYYGFVEDAAHFHATLKAACDAHDPEYYPRFKKWCDEYFYLKHRQEPRG 166
Query: 277 LGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYV 336
+GG+FFD + D E + +FA C N+ +PAY+PI+E+R P+ ++ + +Q RRGRYV
Sbjct: 167 VGGIFFDYVQG-DWEKIFAFAQSCGNAFLPAYLPIVERRHTLPYAERERNFQLYRRGRYV 225
Query: 337 EFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEW 394
EFNLV+DRGT FGL+T GRIESIL+S+P RWEY++ P+ G+ E +L + + P++W
Sbjct: 226 EFNLVWDRGTIFGLQTNGRIESILMSMPPLVRWEYNYRPEPGTAEAELYEVFLVPQDW 283
>sp|Q8YX58|HEM62_NOSS1 Coproporphyrinogen-III oxidase, aerobic 2 OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hemF2 PE=3 SV=1
Length = 347
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/331 (44%), Positives = 207/331 (62%), Gaps = 39/331 (11%)
Query: 90 RARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVS 149
R R ++ +++ QD +C A+E+ DG F +D W R GG G +RV+++G ++E+ GVN S
Sbjct: 31 RQRSQQFMQNLQDEICTALEQLDGKASFHQDHWERAEGGEGRTRVIREGRVFEQGGVNFS 90
Query: 150 VVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G P + A + A+ + FFA G S VLHP+NP+ PT+H NYRYFE
Sbjct: 91 AVWGNSLPASILAQRPEAAGHE-----FFATGTSMVLHPRNPYVPTVHLNYRYFE----- 140
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
A WWFGGG DLTP Y F+ED HFH T K+ACD +P +YP FK+WCD+YFY++
Sbjct: 141 ----AGPIWWFGGGADLTPYYAFKEDAVHFHQTLKNACDVHNPEYYPTFKRWCDEYFYLR 196
Query: 270 HRGERRGLGGLFFD----------------DLNDYDQEM---------LLSFATECANSV 304
HR E+RG+GG+FFD + Y Q++ + +F C +
Sbjct: 197 HREEQRGIGGIFFDYQDASGKLYVESQTDSSVAIYSQKVGNVARNWEDIFAFVQSCGQAF 256
Query: 305 IPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLP 364
+PAY+PI+E+R+ + D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESIL+SLP
Sbjct: 257 LPAYLPIVERRQGIEYGDRQRNFQLYRRGRYVEFNLVYDRGTVFGLQTKGRTESILMSLP 316
Query: 365 LTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
ARWEY + P+ GS E +L + + P++W+
Sbjct: 317 PLARWEYCYEPEAGSPEAELTEVFLQPRDWV 347
>sp|Q0VTD7|HEM6_ALCBS Coproporphyrinogen-III oxidase, aerobic OS=Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573) GN=hemF PE=3 SV=1
Length = 302
Score = 307 bits (787), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 152/300 (50%), Positives = 192/300 (64%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG-VM 155
+ D QD +C A+ DG F+ED W R GGGG SRVL++GA+ EK GVN S V+G +
Sbjct: 13 LLDLQDRICDALGAEDGAATFREDSWEREQGGGGRSRVLENGAVIEKGGVNFSHVFGEQL 72
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A A A F A G+S V+HPKNP+ PT H N R+F + + P
Sbjct: 73 PPSATEARPELAGRS------FQAMGVSLVIHPKNPYVPTSHANVRFFVAEKEGEAP--- 123
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y FEEDV H+H T K AC F YP FK WCDDYFY+KHR E R
Sbjct: 124 -VWWFGGGFDLTPYYGFEEDVVHWHQTAKVACQPFGKEIYPEFKTWCDDYFYLKHRNEPR 182
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN +D + + ++ +PAY PI+ +RKD F D+ + +Q RRGRY
Sbjct: 183 GVGGLFFDDLNRFDFDTSFALMRSIGDAYVPAYQPILARRKDHEFGDRERQFQLYRRGRY 242
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW+YD++P+ S E +L + +EW+
Sbjct: 243 VEFNLVYDRGTIFGLQSGGRTESILMSLPPLVRWDYDYHPEPNSAESELYHKFLIHREWV 302
>sp|Q8YZ37|HEM61_NOSS1 Coproporphyrinogen-III oxidase, aerobic 1 OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=hemF1 PE=3 SV=1
Length = 317
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/324 (48%), Positives = 197/324 (60%), Gaps = 40/324 (12%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMP 156
++ QD + QA+ K DGG +F ED W RP GGGG SRVL+DGAI+E+AGVN S V+G
Sbjct: 1 MKQLQDEITQALTKLDGGSEFHEDSWERPEGGGGRSRVLRDGAIFEQAGVNFSEVWGSHL 60
Query: 157 PEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPR 216
P + A + A F+A G S VLHP+NP+ PT+H NYRYFE A
Sbjct: 61 PPSILAQRPEAEGHG-----FYATGTSLVLHPRNPYVPTVHLNYRYFE---------AGP 106
Query: 217 QWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRG 276
WWFGGG DLTP Y F ED HFH T K ACD+ P +YP FK+WCD+YFY+KHR E RG
Sbjct: 107 VWWFGGGADLTPYYPFAEDAAHFHQTLKLACDEHHPEYYPVFKRWCDEYFYLKHRDETRG 166
Query: 277 LGGLFFD----------------DLNDY----------DQEMLLSFATECANSVIPAYIP 310
+GGLFFD + +Y D E L SF + +PAY+P
Sbjct: 167 VGGLFFDYQDGQGVLYRGPNPKGEAANYSNQVGEPASRDWEDLFSFIQGSGKAFLPAYVP 226
Query: 311 IIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWE 370
I+E+R + D+ + +Q RRGRYVEFNLVYDRGT FGL+T GR ESIL+SLP RWE
Sbjct: 227 IVERRHGMEYGDRQRNFQLYRRGRYVEFNLVYDRGTIFGLQTNGRTESILMSLPPLVRWE 286
Query: 371 YDHNPKEGSEEWKLLDACINPKEW 394
Y + P+ S E +L D + P++W
Sbjct: 287 YGYQPEPNSPEAELYDTFLKPQDW 310
>sp|B8GTF9|HEM6_THISH Coproporphyrinogen-III oxidase, aerobic OS=Thioalkalivibrio sp.
(strain HL-EbGR7) GN=hemF PE=3 SV=1
Length = 304
Score = 303 bits (776), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 197/295 (66%), Gaps = 9/295 (3%)
Query: 101 QDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVMPPEAY 160
QD +CQ I DG G+FKED W+R GGGG SRVL +GA++E+AG+N S V G P +
Sbjct: 18 QDRICQGIAGADGSGEFKEDSWTREEGGGGRSRVLTEGAVFEQAGINFSHVTGASLPPSA 77
Query: 161 RAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAPRQWWF 220
A + + + F A G+S V+HP+NP+ PT H N R+F + GA WWF
Sbjct: 78 TAHRPELAGRR-----FQATGVSLVIHPRNPYVPTSHANVRFFIAE----KEGAEPIWWF 128
Query: 221 GGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERRGLGGL 280
GGG DLTP Y +ED H+H K+AC+ F P YPR+K+WCD+YF+++HR E RG+GGL
Sbjct: 129 GGGFDLTPYYGEDEDCVHWHRVAKAACEPFGPEVYPRYKQWCDEYFFLRHRNEPRGVGGL 188
Query: 281 FFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNL 340
FFDDLN++ E +F + + AY+PI+ +RKDTP+ ++ + +Q RRGRYVEFNL
Sbjct: 189 FFDDLNEWGFEKSFAFMRSVGDHYLDAYLPIVARRKDTPYGERERDFQLYRRGRYVEFNL 248
Query: 341 VYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VYDRGT FGL++GGR ESIL+SLP RW Y+ P+ G+ E +L + + P+EW+
Sbjct: 249 VYDRGTLFGLQSGGRTESILMSLPPLVRWRYNWQPEPGTPEARLYEHFLKPREWV 303
>sp|A2C524|HEM6_PROM1 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL1A) GN=hemF PE=3 SV=1
Length = 348
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 207/345 (60%), Gaps = 39/345 (11%)
Query: 76 SDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVL 135
S ++ ++ A++ RAR +K++ + QD +C +E DG GKF E+ W RP GGGG SRVL
Sbjct: 2 SSSQDKANLPANNSRARAKKLVLELQDEICAGLETIDGEGKFLEESWERPEGGGGRSRVL 61
Query: 136 QDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPT 195
+DG I+E+ GVN S V+G P + + + A +FA G S VLHPKNP+ PT
Sbjct: 62 KDGKIFEQGGVNFSEVHGNELPPSIISQRPEAKGHS-----WFATGTSMVLHPKNPYIPT 116
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+ACD D +
Sbjct: 117 VHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLH 167
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFD-----------------------DLNDY--DQ 290
FK WCD+YF++KHR E RG+GG+F+D +L +Y +
Sbjct: 168 KVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNW 227
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
E L S A C + +P+Y PII+KRK+ F+ + + +Q RRGRY EFNLV+DRGT FGL
Sbjct: 228 ENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGL 287
Query: 351 KTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
+T GR ESIL+SLP ARWEY + P+E S E L D P++W
Sbjct: 288 QTNGRTESILMSLPPLARWEYGYKPEENSREALLTDLFTKPQDWF 332
>sp|A4XNB8|HEM6_PSEMY Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas mendocina
(strain ymp) GN=hemF PE=3 SV=1
Length = 304
Score = 302 bits (774), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 198/300 (66%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG-VM 155
+ D QD +C A+E DG F+ED W RP GGGG +RV+++GA+ EK GVN S V+G +
Sbjct: 12 LLDLQDRICAALEAEDGQALFREDAWQRPAGGGGRTRVIENGALIEKGGVNFSHVFGDSL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP+NP+ PT H N R+F + + P
Sbjct: 72 PPSA-----SAHRPELAGR-GFQALGVSLVIHPENPYVPTSHANVRFFSAEKEGEEP--- 122
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED +++H AC F YPRFK WCD YF++KHRGE R
Sbjct: 123 -VWWFGGGFDLTPYYANEEDCRYWHQVAFDACAPFGAEVYPRFKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RK TPF ++ + +Q RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFMRAIGDAYIQAYLPIVQRRKLTPFGEREREFQAFRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLV+DRGT FGL++GGR ESIL+SLP RW YD P+ GSEE +L + + ++W+
Sbjct: 242 VEFNLVFDRGTLFGLQSGGRTESILMSLPPMVRWGYDWKPEPGSEEARLTEYFLTDRDWL 301
>sp|A6WHB7|HEM6_SHEB8 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS185) GN=hemF PE=3 SV=1
Length = 302
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 192/305 (62%), Gaps = 9/305 (2%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D Q+ +C ++ DG +F D W+R GGGG SRVL GA++E+AGVN S
Sbjct: 7 AVVKAFLLDLQNRICAGLQALDGQARFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G P A A A + F A G+S V+HP NP+ PT H N R+F A K+
Sbjct: 67 VTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTTHANVRFF--IAQKE 119
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
GA WWFGGG DLTP Y FEEDV+ +H T K C F YP++KKWCD+YF++ H
Sbjct: 120 --GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN E SF N + AY PI+E+RKDT F ++ + +Q
Sbjct: 178 RNETRGVGGLFFDDLNQAGFEQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACIN 390
RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E L D +
Sbjct: 238 RRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPEADLYDNYLK 297
Query: 391 PKEWI 395
P++W+
Sbjct: 298 PRDWV 302
>sp|A3CYL1|HEM6_SHEB5 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS155 / ATCC BAA-1091) GN=hemF PE=3 SV=1
Length = 302
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/305 (49%), Positives = 192/305 (62%), Gaps = 9/305 (2%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D Q+ +C ++ DG +F D W+R GGGG SRVL GA++E+AGVN S
Sbjct: 7 AVVKAFLLDLQNRICAGLQALDGQARFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G P A A A + F A G+S V+HP NP+ PT H N R+F A K+
Sbjct: 67 VTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTTHANVRFF--IAQKE 119
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
GA WWFGGG DLTP Y FEEDV+ +H T K C F YP++KKWCD+YF++ H
Sbjct: 120 --GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN E SF N + AY PI+E+RKDT F ++ + +Q
Sbjct: 178 RNETRGVGGLFFDDLNQAGFEQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACIN 390
RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E L D +
Sbjct: 238 RRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPEADLYDNYLK 297
Query: 391 PKEWI 395
P++W+
Sbjct: 298 PRDWV 302
>sp|Q21PU0|HEM6_SACD2 Coproporphyrinogen-III oxidase, aerobic OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=hemF PE=3 SV=1
Length = 303
Score = 301 bits (770), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/313 (48%), Positives = 197/313 (62%), Gaps = 13/313 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
++S+ +V+A + + QD +CQ + DG F ED W RP GGGG SRVL +GA+
Sbjct: 2 TASNKQAVKA----YLLNLQDKICQVLAAVDGKETFVEDSWQRPEGGGGRSRVLTNGAVI 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
EK GVN S V+G P A A A + F A G+S V+HP NP PT H N R
Sbjct: 58 EKGGVNFSHVHGSSMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPHVPTSHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F + GA WWFGGG DLTP Y +ED +H+H+T K+AC F YPR+KKW
Sbjct: 113 FFIAE----KEGAEPVWWFGGGYDLTPYYGNDEDCRHWHNTAKAACAPFGEDKYPRYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YFY+KHR E RG+GGLFFDDLN+ + +F +S AY+PI+E+RKD P+
Sbjct: 169 CDEYFYLKHRDEPRGVGGLFFDDLNELGFDQSFAFMQAVGDSYTQAYVPIVERRKDEPYN 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEE 381
+ +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+SLP RWEYD P+ + E
Sbjct: 229 QAQRDFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSLPPLVRWEYDWQPQPNTPE 288
Query: 382 WKLLDACINPKEW 394
+L + + P++W
Sbjct: 289 ARLYEHYLQPQDW 301
>sp|Q0I0R6|HEM6_SHESR Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
MR-7) GN=hemF PE=3 SV=1
Length = 302
Score = 301 bits (770), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 198/314 (63%), Gaps = 13/314 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S A+ V+A + D Q+ +C +E+ DG F D W+R GGGG SRVL GA++
Sbjct: 2 SVPDATVVKA----FLLDLQNRICAGLEQLDGQASFAADSWTRTEGGGGTSRVLTQGAVF 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
E+AGVN S V G P A A A + F A G+S V+HPKNP+ PT H N R
Sbjct: 58 EQAGVNFSHVTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPKNPYIPTTHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ C F YP++KKW
Sbjct: 113 FF--IAHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDIYPKYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YF++ HR E RG+GGLFFDDLN + F N + AY PI+E+RK+TP+
Sbjct: 169 CDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYG 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEE 381
++ + +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E
Sbjct: 229 EREREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPE 288
Query: 382 WKLLDACINPKEWI 395
L D + P++W+
Sbjct: 289 ADLYDNYLKPRDWV 302
>sp|Q0HPA0|HEM6_SHESM Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
MR-4) GN=hemF PE=3 SV=1
Length = 302
Score = 301 bits (770), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 198/314 (63%), Gaps = 13/314 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S A+ V+A + D Q+ +C +E+ DG F D W+R GGGG SRVL GA++
Sbjct: 2 SVPDATVVKA----FLLDLQNRICAGLEQLDGQASFAADSWTRTEGGGGTSRVLTQGAVF 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
E+AGVN S V G P A A A + F A G+S V+HPKNP+ PT H N R
Sbjct: 58 EQAGVNFSHVTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPKNPYIPTTHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ C F YP++KKW
Sbjct: 113 FF--IAHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDIYPKYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YF++ HR E RG+GGLFFDDLN + F N + AY PI+E+RK+TP+
Sbjct: 169 CDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYG 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEE 381
++ + +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E
Sbjct: 229 EREREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPE 288
Query: 382 WKLLDACINPKEWI 395
L D + P++W+
Sbjct: 289 ADLYDNYLKPRDWV 302
>sp|A0KR67|HEM6_SHESA Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
ANA-3) GN=hemF PE=3 SV=1
Length = 302
Score = 301 bits (770), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 199/314 (63%), Gaps = 13/314 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S A+ V+A + D Q+ +C +E+ DG F D W+R GGGG SRVL GA++
Sbjct: 2 SVPDATVVKA----FLLDLQNRICAGLEQLDGQASFAADSWTRTEGGGGTSRVLTQGAVF 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
E+AGVN S V G P A A A + F A G+S V+HPKNP+ PT H N R
Sbjct: 58 EQAGVNFSHVTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPKNPYIPTTHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F A KD GA WWFGGG DLTP Y FEEDV+ +H T K+ C F YP++KKW
Sbjct: 113 FF--IAHKD--GADPVWWFGGGFDLTPYYPFEEDVREWHQTAKNLCLPFGDDVYPKYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YF++ HR E RG+GGLFFDDLN + F N + AY PI+E+RK+TP+
Sbjct: 169 CDEYFFLPHRNETRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKETPYG 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEE 381
++ + +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E
Sbjct: 229 ERERDFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPE 288
Query: 382 WKLLDACINPKEWI 395
+L D + P++W+
Sbjct: 289 AELYDNYLKPRDWV 302
>sp|Q46IN4|HEM6_PROMT Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain NATL2A) GN=hemF PE=3 SV=1
Length = 348
Score = 300 bits (769), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 154/345 (44%), Positives = 207/345 (60%), Gaps = 39/345 (11%)
Query: 76 SDDKESSSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVL 135
S ++ ++ A++ RAR +K++ + QD +C +E DG GKF E+ W RP GGGG SRVL
Sbjct: 2 SSSQDKANLPANNSRARAKKLVLELQDEICAGLETIDGEGKFLEESWERPEGGGGRSRVL 61
Query: 136 QDGAIWEKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPT 195
+DG I+E+ GVN S V+G P + + + A +FA G S VLHPK+P+ PT
Sbjct: 62 KDGQIFEQGGVNFSEVHGNELPPSIISQRPEAKGHS-----WFATGTSMVLHPKSPYIPT 116
Query: 196 LHFNYRYFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFY 255
+H NYRYFE A WWFGGG DLTP Y + D +HFHS K+ACD D +
Sbjct: 117 VHLNYRYFE---------AGPVWWFGGGADLTPFYPYLSDTRHFHSCHKNACDTIDKDLH 167
Query: 256 PRFKKWCDDYFYIKHRGERRGLGGLFFD-----------------------DLNDY--DQ 290
FK WCD+YF++KHR E RG+GG+F+D +L +Y +
Sbjct: 168 KVFKPWCDEYFFLKHRNETRGVGGIFYDYQDGSGLLYKGQNANGKASKIAKELGEYSLNW 227
Query: 291 EMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRYVEFNLVYDRGTTFGL 350
E L S A C + +P+Y PII+KRK+ F+ + + +Q RRGRY EFNLV+DRGT FGL
Sbjct: 228 ENLFSLAKACGQAFLPSYEPIIKKRKNQSFSTKERDFQLYRRGRYAEFNLVWDRGTIFGL 287
Query: 351 KTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
+T GR ESIL+SLP ARWEY + P+E S E L D P++W
Sbjct: 288 QTNGRTESILMSLPPLARWEYGYKPEENSREALLTDLFTKPQDWF 332
>sp|B8E3K7|HEM6_SHEB2 Coproporphyrinogen-III oxidase, aerobic OS=Shewanella baltica
(strain OS223) GN=hemF PE=3 SV=1
Length = 302
Score = 299 bits (766), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 192/305 (62%), Gaps = 9/305 (2%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D Q+ +C ++ DG +F D W+R GGGG SRVL GA++E+AGVN S
Sbjct: 7 AVVKAFLLDLQNRICAGLQALDGQARFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G P A A A + F A G+S V+HP NP+ PT H N R+F A K+
Sbjct: 67 VTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTTHANVRFF--IAQKE 119
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
GA WWFGGG DLTP Y FEEDV+ +H T K C F YP++KKWCD+YF++ H
Sbjct: 120 --GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN + SF N + AY PI+E+RKDT F ++ + +Q
Sbjct: 178 RNETRGVGGLFFDDLNQEGFDQSFSFMQAVGNGFLTAYAPIVERRKDTEFGERERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACIN 390
RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E L D +
Sbjct: 238 RRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPEADLYDNYLK 297
Query: 391 PKEWI 395
P++W+
Sbjct: 298 PRDWV 302
>sp|Q1I2G6|HEM6_PSEE4 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas entomophila
(strain L48) GN=hemF PE=3 SV=1
Length = 303
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 194/300 (64%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ +G + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVRDAGGGGRTRVIGEGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ + AY+PII++RKDTP+T + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFMRAIGDAYVDAYLPIIQRRKDTPYTAKQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD + GSEE +L D + ++W+
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAEPGSEEARLTDYFLQDRDWL 301
>sp|A5VWK4|HEM6_PSEP1 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=hemF PE=3 SV=1
Length = 303
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/300 (50%), Positives = 193/300 (64%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPYNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCVHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RKDTP+T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFIRAIGDAYINAYLPIVQRRKDTPYTPQQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD GSEE +L + + ++W+
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAAPGSEEARLTEYFLQDRDWL 301
>sp|Q3KKE0|HEM6_PSEPF Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas fluorescens
(strain Pf0-1) GN=hemF PE=1 SV=1
Length = 304
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 196/300 (65%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W+RP GGGG +RV+++G + EK GVN S V+G +
Sbjct: 12 LLDLQDRICAALETEDGGTRFVEDAWTRPAGGGGRTRVIENGTVIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + + P
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFFIAEKEGEEP--- 122
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F P YPR+K WCD YF+IKHR E R
Sbjct: 123 -VWWFGGGFDLTPYYGNEEDCIHWHRVAEKACAPFGPDVYPRYKAWCDTYFHIKHRHEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ I AY+PI+++RK+ FT + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTSFAFMRAIGDAYIDAYLPIVQRRKNDAFTARQREFQEFRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD + GSEE +L + + ++W+
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWAYDWKAEPGSEEARLTEYFLQDRDWL 301
>sp|A6UX86|HEM6_PSEA7 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain PA7) GN=hemF PE=3 SV=1
Length = 305
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 197/306 (64%), Gaps = 11/306 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKAG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYASEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACI 389
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD P+ GSEE +L + +
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFL 295
Query: 390 NPKEWI 395
++W+
Sbjct: 296 TDRDWL 301
>sp|B0KF35|HEM6_PSEPG Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain GB-1) GN=hemF PE=3 SV=1
Length = 303
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/300 (49%), Positives = 193/300 (64%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKVIEKGGVNFSHVFGAGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF++KHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHLKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++D + +F ++ + AY+PI+++RKDTP+T Q + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWDFDTCFAFIRAIGDAYVNAYLPIVQRRKDTPYTPQQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD GSEE +L + + ++W+
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAAPGSEEARLTEYFLQDRDWL 301
>sp|P43898|HEM6_PSEAE Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=hemF PE=3 SV=1
Length = 305
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 197/306 (64%), Gaps = 11/306 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACI 389
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD P+ GSEE +L + +
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFL 295
Query: 390 NPKEWI 395
++W+
Sbjct: 296 ADRDWL 301
>sp|Q02V57|HEM6_PSEAB Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=hemF PE=3 SV=1
Length = 305
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 197/306 (64%), Gaps = 11/306 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACI 389
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD P+ GSEE +L + +
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFL 295
Query: 390 NPKEWI 395
++W+
Sbjct: 296 ADRDWL 301
>sp|B7V0Q9|HEM6_PSEA8 Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas aeruginosa
(strain LESB58) GN=hemF PE=3 SV=1
Length = 305
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/306 (48%), Positives = 197/306 (64%), Gaps = 11/306 (3%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D QD +C A+E DG +F ED W RP GGGG +RV+ DGA+ EK GVN S
Sbjct: 6 AAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSH 65
Query: 151 VYG-VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPK 209
V+G +PP A +A E G F A G+S V+HP+NP PT H N R+F +
Sbjct: 66 VFGDSLPPSA-----SAHRPELAGR-GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEG 119
Query: 210 DTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIK 269
+ P WWFGGG DLTP Y EED H+H + AC F YPR+K+WCD YF++K
Sbjct: 120 EEP----VWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLK 175
Query: 270 HRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQ 329
HR E RG+GGLFFDDLN +D + +F ++ I AY+PI+++RK TPF ++ + +Q
Sbjct: 176 HRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQA 235
Query: 330 LRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACI 389
RRGRYVEFNLV+DRGT FGL++GGR ESIL+SLP RW YD P+ GSEE +L + +
Sbjct: 236 YRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFL 295
Query: 390 NPKEWI 395
++W+
Sbjct: 296 ADRDWL 301
>sp|Q5X5U7|HEM6_LEGPA Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila
(strain Paris) GN=hemF PE=3 SV=1
Length = 311
Score = 298 bits (763), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 193/304 (63%), Gaps = 9/304 (2%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
+ + + Q+++C +E DG +F ED W R GGGG +R++ +G ++EKAGVN S V
Sbjct: 14 QIKSYLLQLQNTICVLLESIDGKTRFHEDSWQRAAGGGGRTRIMTNGNVFEKAGVNFSHV 73
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
G P A A+A E+ F A G+S V+HP+NP+ PT H N R+F +
Sbjct: 74 SGEQLP-----ASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSE 128
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y F ED +H+H T +AC F T YP+FK+WCDDYF+IKHR
Sbjct: 129 P----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHR 184
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDD N+ + + I AY PI+ +RKD PF ++ KA+Q R
Sbjct: 185 NEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYR 244
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINP 391
RGRY EFNLVYDRGT FGL++GGR ESIL+SLP T WEY+ +P++GS+E KL +
Sbjct: 245 RGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPTVHWEYNWHPEKGSDEEKLYTDFLPA 304
Query: 392 KEWI 395
K+W+
Sbjct: 305 KDWL 308
>sp|B4EZS7|HEM6_PROMH Coproporphyrinogen-III oxidase, aerobic OS=Proteus mirabilis
(strain HI4320) GN=hemF PE=3 SV=1
Length = 302
Score = 298 bits (762), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 190/304 (62%), Gaps = 9/304 (2%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
R + QDS+C AIE D F++D W R GGGG +R+L GAI+E+AGVN S V
Sbjct: 8 RVQSFFLSLQDSICHAIENIDQKATFQQDNWQREAGGGGRTRMLTQGAIFEQAGVNFSHV 67
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
YG P + A + S + F A G+S V+HP NP+ PT H N R+F + +
Sbjct: 68 YGDALPASATAHRPELSGRR-----FQAMGVSLVIHPLNPYIPTSHANVRFFIAEKEGED 122
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y FEEDV H+H KS CD F +Y R+KKWCDDYFY+KHR
Sbjct: 123 P----VWWFGGGFDLTPYYGFEEDVIHWHKVAKSVCDPFSQDYYARYKKWCDDYFYLKHR 178
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDDLN D + F + AY+PI+EKRK P+ ++ + +Q R
Sbjct: 179 NEPRGVGGLFFDDLNTPDFDHCFEFVQHVGQGYLDAYLPIVEKRKSIPWGERERQFQLYR 238
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINP 391
RGRYVEFNLV+DRGT FGL++GGR ESIL+S+P R+ YD+ P+ + E KL +
Sbjct: 239 RGRYVEFNLVWDRGTLFGLQSGGRTESILMSMPPLVRFAYDYRPEPNTPEAKLYTDFLIH 298
Query: 392 KEWI 395
KEW+
Sbjct: 299 KEWV 302
>sp|A1RDY8|HEM6_SHESW Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sp. (strain
W3-18-1) GN=hemF PE=3 SV=1
Length = 302
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 191/305 (62%), Gaps = 9/305 (2%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D Q+ +C ++ DG F D W+R GGGG SRVL GA++E+AGVN S
Sbjct: 7 AVVKAFLIDLQNRICAGLQALDGQATFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G P A A A + F A G+S V+HP NP+ PT H N R+F A K+
Sbjct: 67 VTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTTHANVRFF--IAQKE 119
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
GA WWFGGG DLTP Y FEEDV+ +H T K C F YP++KKWCD+YF++ H
Sbjct: 120 --GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN E SF N + AY PI+E+RK+T F ++ + +Q
Sbjct: 178 RNETRGVGGLFFDDLNQDGFEQSFSFMQAVGNGFLTAYAPIVERRKETEFGERERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACIN 390
RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E L D +
Sbjct: 238 RRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPEADLYDNYLK 297
Query: 391 PKEWI 395
P++W+
Sbjct: 298 PRDWV 302
>sp|A4Y1D3|HEM6_SHEPC Coproporphyrinogen-III oxidase, aerobic OS=Shewanella putrefaciens
(strain CN-32 / ATCC BAA-453) GN=hemF PE=3 SV=1
Length = 302
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 149/305 (48%), Positives = 191/305 (62%), Gaps = 9/305 (2%)
Query: 91 ARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSV 150
A + + D Q+ +C ++ DG F D W+R GGGG SRVL GA++E+AGVN S
Sbjct: 7 AVVKAFLIDLQNRICAGLQALDGQATFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSH 66
Query: 151 VYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKD 210
V G P A A A + F A G+S V+HP NP+ PT H N R+F A K+
Sbjct: 67 VTGAAMP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTTHANVRFF--IAQKE 119
Query: 211 TPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKH 270
GA WWFGGG DLTP Y FEEDV+ +H T K C F YP++KKWCD+YF++ H
Sbjct: 120 --GADPVWWFGGGFDLTPYYPFEEDVREWHQTSKDICAPFGDEVYPKYKKWCDEYFFLPH 177
Query: 271 RGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQL 330
R E RG+GGLFFDDLN E SF N + AY PI+E+RK+T F ++ + +Q
Sbjct: 178 RNETRGVGGLFFDDLNQDGFEQSFSFMQAVGNGFLTAYAPIVERRKETEFGERERQFQLY 237
Query: 331 RRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACIN 390
RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+ GS E L D +
Sbjct: 238 RRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEAGSPEADLYDNYLK 297
Query: 391 PKEWI 395
P++W+
Sbjct: 298 PRDWV 302
>sp|Q5ZW72|HEM6_LEGPH Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila
subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 /
DSM 7513) GN=hemF PE=3 SV=2
Length = 311
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 193/304 (63%), Gaps = 9/304 (2%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
+ + + Q+++C ++E DG +F ED W R GGGG +R++ +G ++EKAGVN S V
Sbjct: 14 QIKSYLLQLQNTICVSLESIDGKTRFHEDSWQRAAGGGGKTRIMANGNVFEKAGVNFSHV 73
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
G P A A+A E+ F A G+S V+HP+NP+ PT H N R+F +
Sbjct: 74 SGEQLP-----ASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSE 128
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y F ED +H+H T +AC F T YP+FK+WCDDYF+IKHR
Sbjct: 129 P----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHR 184
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDD N+ + + I AY PI+ +RKD PF ++ KA+Q R
Sbjct: 185 NEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYR 244
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINP 391
RGRY EFNLVYDRGT FGL++GGR ESIL+SLP WEY+ +P++GS+E KL +
Sbjct: 245 RGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPIVHWEYNWHPEKGSDEEKLYTDFLPA 304
Query: 392 KEWI 395
K+W+
Sbjct: 305 KDWL 308
>sp|A5IBB3|HEM6_LEGPC Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila
(strain Corby) GN=hemF PE=3 SV=1
Length = 311
Score = 297 bits (761), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 144/304 (47%), Positives = 193/304 (63%), Gaps = 9/304 (2%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
+ + + Q+++C ++E DG +F ED W R GGGG +R++ +G ++EKAGVN S V
Sbjct: 14 QIKSYLLQLQNTICVSLESIDGKTRFHEDSWQRAAGGGGKTRIMANGNVFEKAGVNFSHV 73
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
G P A A+A E+ F A G+S V+HP+NP+ PT H N R+F +
Sbjct: 74 SGEQLP-----ASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSE 128
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y F ED +H+H T +AC F T YP+FK+WCDDYF+IKHR
Sbjct: 129 P----VWWFGGGFDLTPYYGFVEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHR 184
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDD N+ + + I AY PI+ +RKD PF ++ KA+Q R
Sbjct: 185 NEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYR 244
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINP 391
RGRY EFNLVYDRGT FGL++GGR ESIL+SLP WEY+ +P++GS+E KL +
Sbjct: 245 RGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPIVHWEYNWHPEKGSDEEKLYTDFLPA 304
Query: 392 KEWI 395
K+W+
Sbjct: 305 KDWL 308
>sp|Q5WX75|HEM6_LEGPL Coproporphyrinogen-III oxidase, aerobic OS=Legionella pneumophila
(strain Lens) GN=hemF PE=3 SV=1
Length = 309
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 192/304 (63%), Gaps = 9/304 (2%)
Query: 92 RFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVV 151
+ + + Q+++C ++E DG KF ED W R GGGG +R++ +G ++EKAGVN S V
Sbjct: 14 QIKSYLLQLQNTICVSLESIDGQTKFHEDSWQRAAGGGGKTRIMANGNVFEKAGVNFSHV 73
Query: 152 YGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDT 211
G P A A+A E+ F A G+S V+HP+NP+ PT H N R+F +
Sbjct: 74 SGEQLP-----ASASAHREELAGRHFSALGVSLVIHPQNPYVPTTHANVRFFVAEKEDSE 128
Query: 212 PGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHR 271
P WWFGGG DLTP Y F ED +H+H T +AC F T YP+FK+WCDDYF+IKHR
Sbjct: 129 P----VWWFGGGFDLTPYYGFIEDCEHWHQTALNACLPFGETIYPKFKRWCDDYFFIKHR 184
Query: 272 GERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLR 331
E RG+GGLFFDD N+ + + I AY PI+ +RKD PF ++ KA+Q R
Sbjct: 185 NEARGIGGLFFDDYNEISFDHSFELMRSIGDHFILAYEPIVARRKDIPFGNREKAFQNYR 244
Query: 332 RGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINP 391
RGRY EFNLVYDRGT FGL++GGR ESIL+SLP WEY+ +P++GS E KL +
Sbjct: 245 RGRYAEFNLVYDRGTLFGLQSGGRTESILMSLPPIVHWEYNWHPEKGSNEEKLYTDFLPA 304
Query: 392 KEWI 395
K+W+
Sbjct: 305 KDWL 308
>sp|Q8EKQ2|HEM6_SHEON Coproporphyrinogen-III oxidase, aerobic OS=Shewanella oneidensis
(strain MR-1) GN=hemF PE=3 SV=1
Length = 302
Score = 297 bits (760), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 190/302 (62%), Gaps = 9/302 (2%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
+ + D Q +C +E+ DG F D W+R GGGG SRVL GA++E+AGVN S V G
Sbjct: 10 KAFLLDLQHRICAGLEQLDGQASFAADSWTRAEGGGGTSRVLTQGAVFEQAGVNFSHVTG 69
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
P A A A + F A G+S V+HPKNP+ PT H N R+F A KD G
Sbjct: 70 AAMP-----ASATAHRPELAGRSFEAMGVSLVIHPKNPYIPTTHANVRFFI--AHKD--G 120
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEEDV+ +H + K+ C F YP++KKWCD+YF++ HR E
Sbjct: 121 AEPVWWFGGGFDLTPYYPFEEDVREWHQSAKNLCQPFGDDVYPKYKKWCDEYFFLPHRNE 180
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
RG+GGLFFDDLN + F N + AY PI+E+RKDT + ++ + +Q RRG
Sbjct: 181 TRGVGGLFFDDLNQAGFDKSFDFMQAVGNGFLTAYAPIVERRKDTDYGERERDFQLYRRG 240
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKE 393
RYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P GS E L D + P++
Sbjct: 241 RYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPAAGSPEADLYDNYLKPRD 300
Query: 394 WI 395
W+
Sbjct: 301 WV 302
>sp|Q0T273|HEM6_SHIF8 Coproporphyrinogen-III oxidase, aerobic OS=Shigella flexneri
serotype 5b (strain 8401) GN=hemF PE=3 SV=1
Length = 299
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 195/302 (64%), Gaps = 11/302 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLTAVDGA-EFVEDSWQREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A G+S V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCDDYFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDDYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYGERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKE 393
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+ PK+GS E L I ++
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPE-AALSEFIKVRD 297
Query: 394 WI 395
W+
Sbjct: 298 WV 299
>sp|B1LMN0|HEM6_ECOSM Coproporphyrinogen-III oxidase, aerobic OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=hemF PE=3 SV=1
Length = 299
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/303 (49%), Positives = 196/303 (64%), Gaps = 13/303 (4%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLSAVDGA-EFVEDSWLREAGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 -VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTP 212
VMP A A A + F A G+S V+HP NP+ PT H N R+F + P
Sbjct: 68 EVMP------ASATAHRPELAGRSFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KP 117
Query: 213 GAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRG 272
GA WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCD+YFY+KHR
Sbjct: 118 GAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCQPFGEDVYPRYKKWCDEYFYLKHRN 177
Query: 273 ERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRR 332
E+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RR
Sbjct: 178 EQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTNAYLPIVERRKTMAYGERERNFQLYRR 237
Query: 333 GRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPK 392
GRYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+ PK+GS E L+ I +
Sbjct: 238 GRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPE-AALNEFIKVR 296
Query: 393 EWI 395
+W+
Sbjct: 297 DWV 299
>sp|A8FP82|HEM6_SHESH Coproporphyrinogen-III oxidase, aerobic OS=Shewanella sediminis
(strain HAW-EB3) GN=hemF PE=3 SV=1
Length = 306
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 195/314 (62%), Gaps = 13/314 (4%)
Query: 82 SSSSASSVRARFEKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIW 141
S S+V+A + D Q +C+ +E+ DG G F+ D W R GGGG SRVL +G ++
Sbjct: 2 SVPDTSAVKA----FLLDLQQRICEGLEQLDGKGTFEADSWKREEGGGGTSRVLTNGKVF 57
Query: 142 EKAGVNVSVVYGVMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYR 201
E+AGVN S V G P A A A+ + F A G+S V+HPKNPF PT H N R
Sbjct: 58 EQAGVNFSHVTGAAMP-----ASATANRSELEGRSFEAMGVSLVIHPKNPFLPTTHANVR 112
Query: 202 YFETDAPKDTPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKW 261
+F A K+ GA WWFGGG DLTP Y FEEDV +H C F + YP++KKW
Sbjct: 113 FF--IAKKE--GADPVWWFGGGFDLTPYYPFEEDVIEWHQNAHDLCQPFGESVYPKYKKW 168
Query: 262 CDDYFYIKHRGERRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFT 321
CD+YF++ HR E RG+GGLFFDDLN E F N + +Y PI+E+RKDT +
Sbjct: 169 CDEYFFLPHRNETRGVGGLFFDDLNQDGFEKSFEFMQAVGNGFLTSYAPIVERRKDTEYG 228
Query: 322 DQHKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEE 381
++ + +Q RRGRYVEFNLVYDRGT FGL+TGGR ESIL+S+P RW+Y + P+E S E
Sbjct: 229 EKEREFQLYRRGRYVEFNLVYDRGTLFGLQTGGRTESILMSMPPLVRWQYAYTPEENSAE 288
Query: 382 WKLLDACINPKEWI 395
L + PK+W+
Sbjct: 289 ALLYTDFLKPKDWL 302
>sp|Q32DB7|HEM6_SHIDS Coproporphyrinogen-III oxidase, aerobic OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=hemF PE=3 SV=1
Length = 299
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/302 (49%), Positives = 195/302 (64%), Gaps = 11/302 (3%)
Query: 94 EKMIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYG 153
++ + + QD++CQ + DG +F ED W R GGGG SRVL++G ++E+AGVN S V+G
Sbjct: 9 KQFLLNLQDTICQQLTAVDGA-EFVEDSWQRESGGGGRSRVLRNGGVFEQAGVNFSHVHG 67
Query: 154 VMPPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPG 213
EA A+ A E G F A G+S V+HP NP+ PT H N R+F + PG
Sbjct: 68 ----EAMPASATAHRPELAGR-SFEAMGVSLVVHPHNPYVPTSHANVRFFIAE----KPG 118
Query: 214 APRQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGE 273
A WWFGGG DLTP Y FEED H+H T + C F YPR+KKWCDDYFY+KHR E
Sbjct: 119 AEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVYPRYKKWCDDYFYLKHRNE 178
Query: 274 RRGLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRG 333
+RG+GGLFFDDLN D + +F AY+PI+E+RK + ++ + +Q RRG
Sbjct: 179 QRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVERRKAMAYAERERNFQLYRRG 238
Query: 334 RYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKE 393
RYVEFNLV+DRGT FGL+TGGR ESIL+S+P RWEYD+ PK+GS E L I ++
Sbjct: 239 RYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEYDYQPKDGSPE-AALSEFIKVRD 297
Query: 394 WI 395
W+
Sbjct: 298 WV 299
>sp|B1J4A2|HEM6_PSEPW Coproporphyrinogen-III oxidase, aerobic OS=Pseudomonas putida
(strain W619) GN=hemF PE=3 SV=1
Length = 303
Score = 296 bits (757), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 192/300 (64%), Gaps = 11/300 (3%)
Query: 97 IRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGV-M 155
+ D QD +C A+E DGG +F ED W R GGGG +RV+ DG + EK GVN S V+G +
Sbjct: 12 LLDLQDRICSALETEDGGARFVEDAWVREAGGGGRTRVIGDGKLIEKGGVNFSHVFGSGL 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
PP A +A E G F A G+S V+HP NP PT H N R+F + G
Sbjct: 72 PPSA-----SAHRPELAGR-GFEALGVSLVIHPHNPHVPTSHANVRFF----IAEKEGEE 121
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y EED H+H + AC F YPR+K WCD YF+IKHRGE R
Sbjct: 122 AVWWFGGGFDLTPYYGNEEDCIHWHRVAEQACAPFGADVYPRYKAWCDRYFHIKHRGEPR 181
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++ + +F ++ + AY+PI+++RKDTP+T + + +Q+ RRGRY
Sbjct: 182 GIGGLFFDDLNEWGFDTCFAFIRAIGDAYVDAYLPIVQRRKDTPYTAEQREFQEYRRGRY 241
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEWI 395
VEFNLVYDRGT FGL++GGR ESIL+SLP RW YD GSEE +L + + ++W+
Sbjct: 242 VEFNLVYDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKAAPGSEEARLTEYFLQDRDWL 301
>sp|Q6LLK0|HEM6_PHOPR Coproporphyrinogen-III oxidase, aerobic OS=Photobacterium profundum
GN=hemF PE=3 SV=1
Length = 301
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/299 (47%), Positives = 190/299 (63%), Gaps = 9/299 (3%)
Query: 96 MIRDAQDSVCQAIEKTDGGGKFKEDVWSRPGGGGGISRVLQDGAIWEKAGVNVSVVYGVM 155
+ QD +CQ++E D F++D W R GGGG SRVL+ G+++E+AGVN S V+G
Sbjct: 12 FLLSLQDQICQSLESQDKSAAFEQDEWQREQGGGGRSRVLRQGSVFEQAGVNFSHVFGTK 71
Query: 156 PPEAYRAAKAAASDEKPGPIPFFAAGISSVLHPKNPFAPTLHFNYRYFETDAPKDTPGAP 215
P A A A + F A G+S V+HP NP+ PT H N R+F + + P
Sbjct: 72 MP-----ASATAHRPELAGRSFEAMGVSLVIHPNNPYIPTSHANVRFFIAEKEGEAP--- 123
Query: 216 RQWWFGGGTDLTPAYIFEEDVKHFHSTQKSACDKFDPTFYPRFKKWCDDYFYIKHRGERR 275
WWFGGG DLTP Y FEED +H+H+T K C F Y + K WCD YF++ HR E R
Sbjct: 124 -VWWFGGGFDLTPFYPFEEDCQHWHNTAKYLCAPFGDDIYEQHKVWCDKYFFLPHRNETR 182
Query: 276 GLGGLFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDTPFTDQHKAWQQLRRGRY 335
G+GGLFFDDLN++ E ++ N I Y+PI+++R+DTP+ ++ + +Q RRGRY
Sbjct: 183 GVGGLFFDDLNEWGFEKSFAYTQAVGNGFIDGYLPIVQRRQDTPYGEREREFQLYRRGRY 242
Query: 336 VEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHNPKEGSEEWKLLDACINPKEW 394
VEFNLVYDRGT FGL++GGR ESIL+S+P ARWEY + PK GS E L + + P+EW
Sbjct: 243 VEFNLVYDRGTLFGLQSGGRTESILMSMPPLARWEYCYEPKAGSAEADLYENYLQPREW 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 169,588,488
Number of Sequences: 539616
Number of extensions: 7725316
Number of successful extensions: 17704
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 16698
Number of HSP's gapped (non-prelim): 368
length of query: 395
length of database: 191,569,459
effective HSP length: 120
effective length of query: 275
effective length of database: 126,815,539
effective search space: 34874273225
effective search space used: 34874273225
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)