Query 016103
Match_columns 395
No_of_seqs 457 out of 2334
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 03:49:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 3.5E-33 7.6E-38 255.8 23.5 247 143-392 5-252 (255)
2 PLN02824 hydrolase, alpha/beta 100.0 2.3E-31 4.9E-36 248.9 24.9 243 140-393 28-294 (294)
3 PLN02211 methyl indole-3-aceta 100.0 6E-31 1.3E-35 242.9 24.5 252 138-392 15-269 (273)
4 PRK00870 haloalkane dehalogena 100.0 3.3E-31 7.2E-36 248.7 22.2 245 140-394 45-302 (302)
5 PLN02679 hydrolase, alpha/beta 100.0 5.7E-30 1.2E-34 245.8 25.9 241 140-394 87-358 (360)
6 TIGR02240 PHA_depoly_arom poly 100.0 2.2E-30 4.8E-35 240.0 21.2 237 140-393 24-266 (276)
7 PRK10349 carboxylesterase BioH 100.0 2E-29 4.4E-34 230.9 25.0 233 141-392 13-255 (256)
8 PRK03592 haloalkane dehalogena 100.0 6.3E-30 1.4E-34 239.3 21.8 249 139-393 25-289 (295)
9 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.9E-29 6.4E-34 232.9 24.2 242 139-391 28-281 (282)
10 PRK03204 haloalkane dehalogena 100.0 1.7E-29 3.8E-34 235.1 22.5 246 139-391 32-286 (286)
11 TIGR03611 RutD pyrimidine util 100.0 9.9E-29 2.2E-33 224.9 23.2 242 139-392 11-257 (257)
12 KOG4178 Soluble epoxide hydrol 100.0 2E-29 4.4E-34 227.5 17.5 247 137-392 40-319 (322)
13 PRK10673 acyl-CoA esterase; Pr 100.0 6E-29 1.3E-33 227.3 20.0 234 138-392 13-254 (255)
14 PLN03087 BODYGUARD 1 domain co 100.0 4E-28 8.8E-33 237.1 26.8 247 141-393 201-479 (481)
15 TIGR03056 bchO_mg_che_rel puta 100.0 1.9E-28 4.2E-33 226.4 23.0 238 140-391 27-278 (278)
16 TIGR02427 protocat_pcaD 3-oxoa 100.0 3.8E-28 8.2E-33 219.6 23.4 237 140-391 12-251 (251)
17 PLN02578 hydrolase 100.0 9.7E-28 2.1E-32 230.0 26.0 239 139-391 84-353 (354)
18 PLN03084 alpha/beta hydrolase 100.0 1E-27 2.2E-32 229.8 26.0 246 139-392 125-383 (383)
19 TIGR01738 bioH putative pimelo 100.0 6.9E-28 1.5E-32 217.2 23.2 231 141-390 4-245 (245)
20 PRK06489 hypothetical protein; 100.0 1.8E-27 3.8E-32 228.8 25.4 243 141-394 69-358 (360)
21 PRK11126 2-succinyl-6-hydroxy- 100.0 1.2E-27 2.5E-32 217.1 22.1 229 141-392 2-241 (242)
22 PLN02385 hydrolase; alpha/beta 100.0 4.8E-28 1E-32 231.9 18.3 244 139-394 85-346 (349)
23 PF12697 Abhydrolase_6: Alpha/ 100.0 1.7E-28 3.6E-33 218.2 14.1 221 144-385 1-228 (228)
24 TIGR01250 pro_imino_pep_2 prol 100.0 2E-26 4.2E-31 213.0 25.5 248 140-391 24-288 (288)
25 KOG1454 Predicted hydrolase/ac 100.0 6.4E-28 1.4E-32 226.3 14.3 253 139-394 56-325 (326)
26 TIGR03695 menH_SHCHC 2-succiny 100.0 2.2E-26 4.7E-31 207.6 22.7 241 141-391 1-251 (251)
27 PHA02857 monoglyceride lipase; 99.9 2.2E-26 4.8E-31 213.1 22.3 238 139-393 23-273 (276)
28 PRK07581 hypothetical protein; 99.9 1.2E-26 2.7E-31 221.3 19.0 246 140-392 40-335 (339)
29 KOG4409 Predicted hydrolase/ac 99.9 1.5E-25 3.2E-30 203.0 24.5 247 138-392 87-363 (365)
30 PRK08775 homoserine O-acetyltr 99.9 1.3E-26 2.9E-31 221.3 18.9 241 141-393 57-339 (343)
31 PRK10749 lysophospholipase L2; 99.9 3.6E-26 7.7E-31 217.1 19.9 240 139-393 52-329 (330)
32 PLN02894 hydrolase, alpha/beta 99.9 6E-25 1.3E-29 213.4 28.1 245 138-391 102-383 (402)
33 PLN02298 hydrolase, alpha/beta 99.9 3.4E-26 7.4E-31 217.5 17.4 240 140-393 58-317 (330)
34 PRK00175 metX homoserine O-ace 99.9 1.8E-25 3.9E-30 216.0 20.5 244 141-393 48-374 (379)
35 TIGR01392 homoserO_Ac_trn homo 99.9 8.9E-26 1.9E-30 216.3 18.3 249 140-391 30-351 (351)
36 PRK14875 acetoin dehydrogenase 99.9 5.1E-25 1.1E-29 212.6 23.7 237 138-393 128-371 (371)
37 PLN02652 hydrolase; alpha/beta 99.9 1E-24 2.3E-29 210.3 17.3 237 140-393 135-387 (395)
38 PLN02980 2-oxoglutarate decarb 99.9 4.5E-24 9.8E-29 236.8 24.1 241 140-393 1370-1639(1655)
39 TIGR01249 pro_imino_pep_1 prol 99.9 2.2E-23 4.7E-28 196.1 21.7 106 139-246 25-131 (306)
40 PLN02511 hydrolase 99.9 4.8E-24 1E-28 206.3 14.1 245 139-392 98-364 (388)
41 PRK05855 short chain dehydroge 99.9 1.2E-23 2.6E-28 215.0 17.7 253 138-392 22-291 (582)
42 COG2267 PldB Lysophospholipase 99.9 4.4E-23 9.6E-28 191.7 19.7 245 142-393 35-294 (298)
43 KOG1455 Lysophospholipase [Lip 99.9 1.1E-22 2.5E-27 181.0 14.6 238 139-393 52-312 (313)
44 COG1647 Esterase/lipase [Gener 99.9 3.2E-22 6.9E-27 169.8 16.6 221 141-392 15-243 (243)
45 KOG2382 Predicted alpha/beta h 99.9 2.1E-21 4.6E-26 175.8 20.9 237 138-393 49-313 (315)
46 PRK06765 homoserine O-acetyltr 99.9 1.5E-21 3.3E-26 187.7 19.8 252 139-392 54-387 (389)
47 TIGR01607 PST-A Plasmodium sub 99.9 1.7E-21 3.6E-26 184.9 19.4 243 140-391 20-331 (332)
48 PRK05077 frsA fermentation/res 99.9 9.6E-21 2.1E-25 184.2 23.9 217 139-393 192-412 (414)
49 PRK10985 putative hydrolase; P 99.9 5E-21 1.1E-25 181.3 18.2 240 139-391 56-318 (324)
50 TIGR03100 hydr1_PEP hydrolase, 99.9 1.1E-20 2.4E-25 174.7 19.1 231 140-392 25-274 (274)
51 PRK11071 esterase YqiA; Provis 99.9 3.7E-20 8.1E-25 161.3 20.8 184 142-391 2-189 (190)
52 PF00561 Abhydrolase_1: alpha/ 99.9 1E-21 2.2E-26 175.9 8.2 214 169-387 1-229 (230)
53 PRK13604 luxD acyl transferase 99.8 2.4E-19 5.3E-24 164.2 21.4 199 139-375 35-246 (307)
54 PRK10566 esterase; Provisional 99.8 1.7E-19 3.8E-24 164.4 20.4 206 139-393 25-248 (249)
55 TIGR01838 PHA_synth_I poly(R)- 99.8 3E-19 6.6E-24 176.5 21.0 238 140-380 187-462 (532)
56 KOG2564 Predicted acetyltransf 99.8 2.9E-20 6.2E-25 162.7 9.3 106 138-244 71-181 (343)
57 COG0596 MhpC Predicted hydrola 99.8 9.7E-19 2.1E-23 157.8 19.8 242 141-391 21-280 (282)
58 KOG2984 Predicted hydrolase [G 99.8 4.5E-20 9.7E-25 154.0 7.9 232 138-392 39-275 (277)
59 TIGR01836 PHA_synth_III_C poly 99.8 1.6E-18 3.4E-23 166.1 19.0 244 141-392 62-349 (350)
60 PF12695 Abhydrolase_5: Alpha/ 99.8 7E-19 1.5E-23 146.4 13.5 144 143-373 1-145 (145)
61 PLN02872 triacylglycerol lipas 99.8 1.2E-18 2.5E-23 167.7 16.1 247 140-393 73-389 (395)
62 PF06342 DUF1057: Alpha/beta h 99.8 4.8E-17 1E-21 144.2 22.1 233 142-391 36-297 (297)
63 PRK07868 acyl-CoA synthetase; 99.8 2E-17 4.4E-22 178.0 20.3 248 139-392 65-360 (994)
64 PRK11460 putative hydrolase; P 99.7 1E-16 2.2E-21 144.4 17.2 176 138-391 13-210 (232)
65 COG3208 GrsT Predicted thioest 99.7 5.3E-16 1.1E-20 135.1 16.5 228 138-392 4-235 (244)
66 KOG1552 Predicted alpha/beta h 99.7 5.3E-16 1.1E-20 136.0 15.6 189 141-392 60-251 (258)
67 TIGR03101 hydr2_PEP hydrolase, 99.7 3.9E-16 8.4E-21 142.2 14.3 103 141-245 25-134 (266)
68 COG0429 Predicted hydrolase of 99.7 1.3E-15 2.7E-20 138.0 15.9 248 138-391 72-338 (345)
69 PF00326 Peptidase_S9: Prolyl 99.7 9.3E-16 2E-20 136.5 14.7 192 156-392 2-208 (213)
70 PLN02442 S-formylglutathione h 99.7 6.7E-15 1.4E-19 136.6 19.9 108 138-246 44-179 (283)
71 TIGR02821 fghA_ester_D S-formy 99.7 1.2E-14 2.6E-19 134.4 21.3 108 139-246 40-174 (275)
72 KOG4667 Predicted esterase [Li 99.7 3.4E-15 7.4E-20 126.3 15.7 219 136-390 28-255 (269)
73 PLN00021 chlorophyllase 99.6 1.2E-14 2.6E-19 136.0 17.4 106 138-245 49-166 (313)
74 COG2021 MET2 Homoserine acetyl 99.6 1.8E-14 4E-19 132.6 17.5 253 138-392 48-367 (368)
75 COG1506 DAP2 Dipeptidyl aminop 99.6 7.7E-15 1.7E-19 150.2 16.6 206 142-393 395-616 (620)
76 TIGR01840 esterase_phb esteras 99.6 2.7E-14 5.9E-19 126.9 17.8 108 139-246 11-131 (212)
77 PF02230 Abhydrolase_2: Phosph 99.6 1.7E-14 3.6E-19 128.7 13.3 179 137-392 10-214 (216)
78 KOG1838 Alpha/beta hydrolase [ 99.6 2.9E-13 6.3E-18 127.1 21.2 219 139-378 123-368 (409)
79 KOG4391 Predicted alpha/beta h 99.6 1.3E-14 2.9E-19 122.7 10.8 203 137-392 74-281 (300)
80 COG2945 Predicted hydrolase of 99.6 1.5E-13 3.2E-18 114.8 16.0 175 138-391 25-205 (210)
81 KOG2931 Differentiation-relate 99.6 1.5E-12 3.3E-17 115.5 22.9 242 140-392 45-305 (326)
82 PRK10162 acetyl esterase; Prov 99.6 4.2E-13 9.2E-18 126.6 20.7 106 140-246 80-196 (318)
83 TIGR03230 lipo_lipase lipoprot 99.6 4.4E-14 9.6E-19 136.2 13.4 107 138-246 38-155 (442)
84 PF03096 Ndr: Ndr family; Int 99.5 2.9E-13 6.2E-18 121.9 16.0 235 140-391 22-277 (283)
85 PF01738 DLH: Dienelactone hyd 99.5 1.4E-13 3.1E-18 122.8 13.5 179 139-393 12-217 (218)
86 PF06821 Ser_hydrolase: Serine 99.5 1.8E-13 3.8E-18 116.7 13.2 155 144-378 1-158 (171)
87 PF00975 Thioesterase: Thioest 99.5 7.4E-13 1.6E-17 119.0 17.7 221 142-390 1-229 (229)
88 PF06500 DUF1100: Alpha/beta h 99.5 1.3E-12 2.9E-17 123.6 16.6 214 138-391 187-407 (411)
89 cd00707 Pancreat_lipase_like P 99.5 1.5E-13 3.2E-18 126.7 9.7 107 138-246 33-148 (275)
90 COG0400 Predicted esterase [Ge 99.5 9.5E-13 2E-17 114.8 13.8 173 138-388 15-204 (207)
91 PF05728 UPF0227: Uncharacteri 99.4 1.7E-11 3.7E-16 105.6 19.5 182 144-391 2-187 (187)
92 TIGR01849 PHB_depoly_PhaZ poly 99.4 3.1E-11 6.7E-16 115.4 21.5 245 142-392 103-405 (406)
93 TIGR01839 PHA_synth_II poly(R) 99.4 1E-11 2.2E-16 122.1 18.5 104 140-248 214-331 (560)
94 PF10230 DUF2305: Uncharacteri 99.4 1.4E-11 3.1E-16 112.9 18.1 108 141-248 2-125 (266)
95 PF05448 AXE1: Acetyl xylan es 99.4 1.3E-11 2.9E-16 115.6 17.9 214 138-392 80-319 (320)
96 TIGR00976 /NonD putative hydro 99.4 2.7E-11 5.7E-16 122.9 19.0 105 139-245 20-132 (550)
97 COG4188 Predicted dienelactone 99.3 1.2E-12 2.7E-17 121.0 6.1 254 85-382 19-303 (365)
98 PF08538 DUF1749: Protein of u 99.3 4.8E-11 1E-15 108.6 15.6 234 140-391 32-303 (303)
99 KOG2565 Predicted hydrolases o 99.3 3.3E-11 7.1E-16 110.1 14.3 102 141-243 152-262 (469)
100 COG0412 Dienelactone hydrolase 99.3 9.4E-11 2E-15 105.4 17.3 174 142-392 28-232 (236)
101 PRK10252 entF enterobactin syn 99.3 1.1E-10 2.3E-15 130.5 19.7 103 139-245 1066-1171(1296)
102 TIGR03502 lipase_Pla1_cef extr 99.3 2E-11 4.4E-16 124.9 12.6 90 141-230 449-575 (792)
103 PRK10115 protease 2; Provision 99.3 2.4E-10 5.2E-15 118.1 18.5 108 138-245 442-559 (686)
104 COG4757 Predicted alpha/beta h 99.3 2.2E-10 4.7E-15 98.5 14.7 228 143-390 32-280 (281)
105 COG3319 Thioesterase domains o 99.2 4.2E-10 9.1E-15 101.3 16.6 101 142-246 1-104 (257)
106 PF12146 Hydrolase_4: Putative 99.2 2.3E-11 4.9E-16 89.6 7.0 65 140-204 15-79 (79)
107 PF12740 Chlorophyllase2: Chlo 99.2 2.1E-10 4.6E-15 102.6 14.1 106 138-245 14-131 (259)
108 PF09752 DUF2048: Uncharacteri 99.2 8.4E-10 1.8E-14 102.1 17.8 243 138-392 89-348 (348)
109 COG3545 Predicted esterase of 99.2 1.3E-09 2.8E-14 90.3 16.7 173 141-392 2-178 (181)
110 PF03403 PAF-AH_p_II: Platelet 99.2 5.6E-11 1.2E-15 114.1 10.1 105 139-245 98-262 (379)
111 COG3571 Predicted hydrolase of 99.2 1.3E-09 2.8E-14 88.4 15.8 179 142-392 15-210 (213)
112 PF03959 FSH1: Serine hydrolas 99.2 1.4E-10 3E-15 102.9 10.3 165 140-379 3-207 (212)
113 COG3243 PhaC Poly(3-hydroxyalk 99.2 2.2E-10 4.7E-15 107.2 11.5 104 140-248 106-220 (445)
114 PF02129 Peptidase_S15: X-Pro 99.2 6.8E-10 1.5E-14 102.5 14.5 107 138-246 17-137 (272)
115 PF07859 Abhydrolase_3: alpha/ 99.2 1.9E-10 4.1E-15 102.0 9.9 98 144-246 1-111 (211)
116 PF06028 DUF915: Alpha/beta hy 99.1 1.6E-09 3.4E-14 97.9 14.8 203 139-391 9-253 (255)
117 KOG4627 Kynurenine formamidase 99.1 3.5E-10 7.5E-15 95.5 9.5 201 134-390 60-268 (270)
118 PF10503 Esterase_phd: Esteras 99.1 4.5E-09 9.7E-14 92.8 17.1 107 140-246 15-133 (220)
119 COG3458 Acetyl esterase (deace 99.1 8.2E-10 1.8E-14 97.3 11.6 208 139-391 81-315 (321)
120 KOG2551 Phospholipase/carboxyh 99.1 5.8E-09 1.3E-13 89.6 16.2 176 140-391 4-222 (230)
121 PRK05371 x-prolyl-dipeptidyl a 99.1 2.2E-09 4.7E-14 111.9 16.4 85 159-245 270-373 (767)
122 PF07224 Chlorophyllase: Chlor 99.1 1.4E-09 3.1E-14 95.5 11.7 106 138-245 43-157 (307)
123 PF07819 PGAP1: PGAP1-like pro 99.1 1.7E-09 3.7E-14 96.5 12.4 104 140-247 3-125 (225)
124 KOG2624 Triglyceride lipase-ch 99.0 5E-09 1.1E-13 100.1 15.2 107 139-246 71-200 (403)
125 PF02273 Acyl_transf_2: Acyl t 99.0 4.9E-09 1.1E-13 91.1 13.6 209 138-379 27-242 (294)
126 KOG3975 Uncharacterized conser 99.0 5.9E-08 1.3E-12 84.6 19.4 249 131-390 19-300 (301)
127 PF06057 VirJ: Bacterial virul 99.0 7E-09 1.5E-13 87.9 13.1 180 143-392 4-191 (192)
128 COG0657 Aes Esterase/lipase [L 99.0 2.7E-08 5.9E-13 93.8 18.5 107 138-248 76-194 (312)
129 KOG3847 Phospholipase A2 (plat 99.0 5.2E-09 1.1E-13 93.9 11.9 107 138-246 115-276 (399)
130 PTZ00472 serine carboxypeptida 99.0 9E-08 1.9E-12 94.6 21.4 107 138-246 74-217 (462)
131 KOG2112 Lysophospholipase [Lip 98.9 8.6E-09 1.9E-13 88.0 9.7 176 141-388 3-203 (206)
132 KOG1515 Arylacetamide deacetyl 98.9 2E-07 4.4E-12 87.4 18.8 221 139-392 88-334 (336)
133 KOG2100 Dipeptidyl aminopeptid 98.9 5.7E-08 1.2E-12 101.1 16.4 200 139-391 524-745 (755)
134 smart00824 PKS_TE Thioesterase 98.8 3.8E-07 8.2E-12 80.1 17.2 97 146-246 2-103 (212)
135 PLN02733 phosphatidylcholine-s 98.8 3E-08 6.5E-13 96.6 9.8 95 152-248 105-204 (440)
136 PRK04940 hypothetical protein; 98.8 1E-06 2.2E-11 74.7 17.6 171 144-392 2-179 (180)
137 PF12715 Abhydrolase_7: Abhydr 98.8 2.7E-08 5.8E-13 93.1 8.6 106 138-245 112-260 (390)
138 COG4099 Predicted peptidase [G 98.8 3.8E-08 8.2E-13 87.9 9.0 102 142-245 192-304 (387)
139 PF01674 Lipase_2: Lipase (cla 98.7 8.9E-09 1.9E-13 90.8 4.5 88 142-231 2-96 (219)
140 KOG3043 Predicted hydrolase re 98.7 1.5E-07 3.2E-12 81.1 11.2 172 142-392 40-239 (242)
141 PF03583 LIP: Secretory lipase 98.7 2.5E-06 5.4E-11 79.3 19.6 61 332-392 218-284 (290)
142 PF00151 Lipase: Lipase; Inte 98.7 2.2E-08 4.7E-13 94.4 5.2 108 138-246 68-188 (331)
143 KOG2281 Dipeptidyl aminopeptid 98.6 4.8E-07 1E-11 88.5 13.1 205 138-392 639-866 (867)
144 PLN02606 palmitoyl-protein thi 98.6 2.7E-06 5.8E-11 77.7 16.2 102 140-245 25-132 (306)
145 PF08840 BAAT_C: BAAT / Acyl-C 98.6 6.3E-08 1.4E-12 85.9 5.4 51 195-246 5-57 (213)
146 PF11339 DUF3141: Protein of u 98.6 8.3E-06 1.8E-10 78.8 19.4 80 160-246 93-176 (581)
147 COG4814 Uncharacterized protei 98.5 3.9E-06 8.3E-11 73.7 14.6 104 142-246 46-177 (288)
148 PF05705 DUF829: Eukaryotic pr 98.5 2E-05 4.3E-10 71.3 19.9 216 144-390 2-240 (240)
149 PF05990 DUF900: Alpha/beta hy 98.5 1.2E-06 2.6E-11 78.7 11.2 107 138-245 15-137 (233)
150 PF00450 Peptidase_S10: Serine 98.4 1.2E-05 2.6E-10 78.8 17.0 107 138-246 37-182 (415)
151 COG1075 LipA Predicted acetylt 98.4 7.7E-07 1.7E-11 84.5 8.0 102 141-246 59-165 (336)
152 KOG1553 Predicted alpha/beta h 98.4 1.1E-06 2.3E-11 80.2 8.4 102 140-244 242-344 (517)
153 PF05057 DUF676: Putative seri 98.4 1.5E-06 3.2E-11 77.4 8.5 88 140-229 3-97 (217)
154 PRK10439 enterobactin/ferric e 98.4 2.5E-05 5.5E-10 76.1 17.2 107 139-245 207-323 (411)
155 KOG4840 Predicted hydrolases o 98.3 9.1E-06 2E-10 69.9 12.2 102 141-246 36-145 (299)
156 PLN02633 palmitoyl protein thi 98.3 6.1E-05 1.3E-09 69.0 17.5 103 139-245 23-131 (314)
157 KOG3253 Predicted alpha/beta h 98.3 1E-05 2.3E-10 78.9 12.5 174 140-392 175-377 (784)
158 PF04301 DUF452: Protein of un 98.3 5.2E-05 1.1E-09 66.3 15.2 82 140-247 10-92 (213)
159 COG3509 LpqC Poly(3-hydroxybut 98.2 1.5E-05 3.2E-10 71.9 10.5 107 139-245 59-179 (312)
160 PF12048 DUF3530: Protein of u 98.1 0.00032 7E-09 65.8 19.3 105 141-246 87-230 (310)
161 PF10340 DUF2424: Protein of u 98.1 0.00015 3.3E-09 68.6 16.9 106 139-247 120-237 (374)
162 COG2936 Predicted acyl esteras 98.1 2.9E-05 6.3E-10 76.8 11.9 118 129-246 31-160 (563)
163 PF00756 Esterase: Putative es 98.1 1.6E-05 3.4E-10 72.4 8.3 110 137-246 20-151 (251)
164 PLN02209 serine carboxypeptida 98.0 0.0004 8.6E-09 68.2 18.4 61 333-394 351-436 (437)
165 PF05577 Peptidase_S28: Serine 98.0 5.1E-05 1.1E-09 75.0 11.4 107 140-246 28-149 (434)
166 PF05677 DUF818: Chlamydia CHL 97.9 6.2E-05 1.3E-09 69.5 9.7 90 138-231 134-236 (365)
167 PF08386 Abhydrolase_4: TAP-li 97.9 3.4E-05 7.5E-10 59.9 7.0 60 333-392 34-93 (103)
168 COG1073 Hydrolases of the alph 97.9 9.8E-05 2.1E-09 68.3 11.0 225 139-393 47-297 (299)
169 PLN03016 sinapoylglucose-malat 97.9 0.0023 5E-08 62.8 20.8 61 333-394 347-432 (433)
170 KOG3101 Esterase D [General fu 97.9 8.2E-05 1.8E-09 63.7 9.2 109 138-247 41-178 (283)
171 PF02450 LCAT: Lecithin:choles 97.9 5.6E-05 1.2E-09 73.3 8.9 83 156-248 66-163 (389)
172 COG4782 Uncharacterized protei 97.8 0.00013 2.8E-09 67.8 10.0 107 138-245 113-234 (377)
173 KOG1551 Uncharacterized conser 97.8 0.00014 3.1E-09 64.3 9.4 230 138-393 110-366 (371)
174 PF02089 Palm_thioest: Palmito 97.8 2.7E-05 5.9E-10 70.6 4.8 105 140-245 4-116 (279)
175 KOG2541 Palmitoyl protein thio 97.8 0.00022 4.8E-09 63.4 10.3 100 142-245 24-128 (296)
176 cd00312 Esterase_lipase Estera 97.8 3.3E-05 7.3E-10 77.6 5.9 107 138-246 92-214 (493)
177 COG2272 PnbA Carboxylesterase 97.7 0.00013 2.8E-09 70.6 8.9 108 138-246 91-218 (491)
178 KOG3724 Negative regulator of 97.6 0.0003 6.6E-09 71.0 9.0 104 138-245 86-220 (973)
179 COG4553 DepA Poly-beta-hydroxy 97.5 0.014 3E-07 52.8 18.0 106 138-247 100-211 (415)
180 COG3150 Predicted esterase [Ge 97.5 0.00059 1.3E-08 56.4 8.4 88 144-245 2-91 (191)
181 COG0627 Predicted esterase [Ge 97.4 0.00065 1.4E-08 63.5 8.1 111 138-248 51-190 (316)
182 KOG1282 Serine carboxypeptidas 97.4 0.025 5.3E-07 55.5 19.1 61 334-394 364-449 (454)
183 PLN02213 sinapoylglucose-malat 97.4 0.013 2.8E-07 55.4 17.0 60 333-393 233-317 (319)
184 KOG3967 Uncharacterized conser 97.3 0.0033 7E-08 54.1 10.2 106 139-245 99-227 (297)
185 PF10142 PhoPQ_related: PhoPQ- 97.2 0.0043 9.2E-08 59.1 11.1 158 197-391 157-318 (367)
186 PF11144 DUF2920: Protein of u 97.2 0.033 7.1E-07 53.3 16.9 36 211-246 185-220 (403)
187 COG1770 PtrB Protease II [Amin 97.1 0.0049 1.1E-07 61.7 11.1 109 138-246 445-563 (682)
188 KOG2183 Prolylcarboxypeptidase 97.0 0.0033 7E-08 59.5 8.6 104 142-245 81-202 (492)
189 KOG2182 Hydrolytic enzymes of 97.0 0.0055 1.2E-07 59.4 10.2 110 137-246 82-208 (514)
190 PF00135 COesterase: Carboxyle 97.0 0.0011 2.4E-08 67.2 6.0 106 140-245 124-245 (535)
191 PLN02517 phosphatidylcholine-s 97.0 0.0015 3.3E-08 64.9 6.4 91 155-247 156-265 (642)
192 cd00741 Lipase Lipase. Lipase 96.8 0.0034 7.4E-08 52.4 6.4 51 195-246 10-68 (153)
193 KOG2521 Uncharacterized conser 96.8 0.039 8.5E-07 52.1 13.6 238 141-393 38-290 (350)
194 PF07082 DUF1350: Protein of u 96.7 0.016 3.4E-07 51.7 10.1 94 140-243 16-123 (250)
195 PF06259 Abhydrolase_8: Alpha/ 96.7 0.027 5.8E-07 48.1 10.9 107 140-246 18-145 (177)
196 COG3946 VirJ Type IV secretory 96.6 0.0065 1.4E-07 57.4 7.2 85 142-233 261-349 (456)
197 PF01764 Lipase_3: Lipase (cla 96.4 0.0063 1.4E-07 49.8 5.6 37 193-230 48-84 (140)
198 PF11187 DUF2974: Protein of u 96.2 0.012 2.6E-07 52.4 6.4 52 193-246 69-124 (224)
199 COG2830 Uncharacterized protei 96.2 0.014 3.1E-07 47.9 5.9 81 140-246 10-91 (214)
200 KOG2237 Predicted serine prote 96.1 0.027 5.8E-07 56.3 8.7 107 139-245 468-584 (712)
201 COG2819 Predicted hydrolase of 96.0 0.011 2.3E-07 53.3 5.1 51 198-248 123-175 (264)
202 KOG2369 Lecithin:cholesterol a 95.9 0.013 2.9E-07 56.6 5.4 84 155-245 124-225 (473)
203 KOG1202 Animal-type fatty acid 95.6 0.052 1.1E-06 57.8 8.4 99 137-245 2119-2219(2376)
204 COG2939 Carboxypeptidase C (ca 95.5 0.04 8.7E-07 53.8 7.1 110 139-249 99-240 (498)
205 KOG1516 Carboxylesterase and r 95.5 0.035 7.6E-07 56.6 7.1 105 141-245 112-232 (545)
206 KOG4372 Predicted alpha/beta h 95.4 0.032 7E-07 53.0 5.7 91 137-229 76-169 (405)
207 COG2382 Fes Enterochelin ester 95.3 0.034 7.3E-07 50.9 5.6 109 138-246 95-213 (299)
208 cd00519 Lipase_3 Lipase (class 95.3 0.037 8E-07 49.5 5.8 21 210-230 128-148 (229)
209 PF11288 DUF3089: Protein of u 95.3 0.039 8.5E-07 48.1 5.6 68 163-231 41-116 (207)
210 PF01083 Cutinase: Cutinase; 95.2 0.041 9E-07 47.2 5.5 76 169-248 40-125 (179)
211 PLN02162 triacylglycerol lipas 94.8 0.078 1.7E-06 51.6 6.6 50 195-245 264-321 (475)
212 PLN00413 triacylglycerol lipas 94.7 0.082 1.8E-06 51.7 6.7 51 194-245 269-327 (479)
213 COG1505 Serine proteases of th 94.3 0.18 3.9E-06 50.3 8.1 103 140-243 420-533 (648)
214 PLN02310 triacylglycerol lipas 94.2 0.12 2.6E-06 49.7 6.5 52 193-244 189-247 (405)
215 PLN02454 triacylglycerol lipas 93.7 0.12 2.5E-06 50.0 5.4 35 196-230 213-248 (414)
216 PF05277 DUF726: Protein of un 93.7 0.15 3.3E-06 48.2 6.1 39 210-248 220-263 (345)
217 PLN02571 triacylglycerol lipas 93.6 0.12 2.5E-06 50.0 5.2 38 193-230 208-246 (413)
218 PLN02408 phospholipase A1 92.8 0.18 3.8E-06 48.1 5.0 36 195-230 184-220 (365)
219 PLN02324 triacylglycerol lipas 92.2 0.23 4.9E-06 48.0 5.0 36 195-230 199-235 (415)
220 PF06850 PHB_depo_C: PHB de-po 92.1 0.26 5.6E-06 42.3 4.6 61 333-393 134-202 (202)
221 PLN02934 triacylglycerol lipas 91.8 0.26 5.6E-06 48.6 5.0 35 194-229 306-340 (515)
222 PLN03037 lipase class 3 family 91.8 0.24 5.1E-06 49.0 4.7 37 194-230 299-338 (525)
223 PLN02753 triacylglycerol lipas 91.7 0.27 5.8E-06 48.7 4.9 37 194-230 292-332 (531)
224 PLN02802 triacylglycerol lipas 91.6 0.28 6.2E-06 48.4 5.0 37 194-230 313-350 (509)
225 PF05576 Peptidase_S37: PS-10 91.4 0.54 1.2E-05 45.1 6.4 107 136-246 58-170 (448)
226 PLN02761 lipase class 3 family 91.1 0.32 6.9E-06 48.2 4.7 36 194-229 273-313 (527)
227 TIGR03712 acc_sec_asp2 accesso 90.7 13 0.00028 36.8 15.0 90 138-231 286-378 (511)
228 PLN02719 triacylglycerol lipas 90.3 0.43 9.2E-06 47.2 4.9 37 194-230 278-318 (518)
229 COG4947 Uncharacterized protei 89.7 0.98 2.1E-05 37.9 5.8 44 202-246 94-137 (227)
230 PF08237 PE-PPE: PE-PPE domain 89.1 2.7 5.9E-05 37.4 8.7 80 168-247 2-91 (225)
231 PF07519 Tannase: Tannase and 88.4 1.9 4.1E-05 43.1 8.0 83 160-245 52-150 (474)
232 PLN02847 triacylglycerol lipas 88.3 0.81 1.8E-05 46.1 5.2 21 210-230 251-271 (633)
233 PF04083 Abhydro_lipase: Parti 87.7 0.41 9E-06 33.2 2.0 20 138-157 40-59 (63)
234 KOG2029 Uncharacterized conser 87.4 1.2 2.6E-05 44.7 5.6 56 191-246 505-573 (697)
235 KOG4569 Predicted lipase [Lipi 86.5 1.1 2.3E-05 42.7 4.9 37 193-230 155-191 (336)
236 COG4287 PqaA PhoPQ-activated p 84.9 2.1 4.6E-05 40.4 5.6 56 333-391 329-385 (507)
237 PF09949 DUF2183: Uncharacteri 84.8 13 0.00029 28.4 9.1 87 153-240 8-97 (100)
238 KOG4540 Putative lipase essent 81.8 2.4 5.3E-05 38.5 4.6 35 198-232 264-298 (425)
239 COG5153 CVT17 Putative lipase 81.8 2.4 5.3E-05 38.5 4.6 35 198-232 264-298 (425)
240 KOG4388 Hormone-sensitive lipa 80.5 14 0.00031 37.3 9.6 98 141-245 396-508 (880)
241 KOG1283 Serine carboxypeptidas 80.5 4.7 0.0001 37.5 6.0 104 139-245 29-166 (414)
242 PF06441 EHN: Epoxide hydrolas 79.3 1.6 3.4E-05 34.3 2.3 25 137-161 88-112 (112)
243 PRK12467 peptide synthase; Pro 79.3 11 0.00024 47.9 10.7 100 141-244 3692-3794(3956)
244 KOG2385 Uncharacterized conser 77.3 4.5 9.8E-05 39.9 5.2 48 206-254 444-496 (633)
245 cd01714 ETF_beta The electron 76.4 12 0.00026 32.7 7.3 72 160-241 68-145 (202)
246 PF09994 DUF2235: Uncharacteri 71.6 28 0.00061 32.1 8.9 90 142-231 2-113 (277)
247 PF06792 UPF0261: Uncharacteri 71.1 43 0.00093 32.5 10.1 100 142-242 2-127 (403)
248 PF06309 Torsin: Torsin; Inte 68.4 16 0.00035 29.2 5.6 60 136-205 47-115 (127)
249 PF07519 Tannase: Tannase and 68.0 8.7 0.00019 38.4 5.0 60 333-392 353-426 (474)
250 PRK02399 hypothetical protein; 67.8 69 0.0015 31.1 10.7 99 142-242 4-129 (406)
251 COG1448 TyrB Aspartate/tyrosin 65.1 38 0.00083 32.5 8.2 88 140-244 170-264 (396)
252 PF03610 EIIA-man: PTS system 63.3 69 0.0015 24.9 8.6 75 143-229 2-77 (116)
253 COG0529 CysC Adenylylsulfate k 62.6 58 0.0013 27.9 8.0 39 138-176 19-59 (197)
254 COG3673 Uncharacterized conser 62.4 70 0.0015 30.1 9.1 93 138-230 28-142 (423)
255 smart00827 PKS_AT Acyl transfe 61.2 10 0.00023 35.0 4.0 31 198-229 71-101 (298)
256 PF00698 Acyl_transf_1: Acyl t 59.8 7.2 0.00016 36.7 2.6 31 198-229 73-103 (318)
257 COG3933 Transcriptional antite 58.4 63 0.0014 31.7 8.5 76 140-228 108-183 (470)
258 TIGR03131 malonate_mdcH malona 57.3 14 0.0003 34.3 4.0 31 198-229 65-95 (295)
259 PRK05579 bifunctional phosphop 56.6 94 0.002 30.3 9.7 72 141-217 116-196 (399)
260 PF03283 PAE: Pectinacetyleste 55.7 74 0.0016 30.6 8.7 35 210-244 156-194 (361)
261 cd00006 PTS_IIA_man PTS_IIA, P 54.1 1.1E+02 0.0023 24.1 8.3 72 143-226 3-74 (122)
262 cd03818 GT1_ExpC_like This fam 54.1 85 0.0018 30.2 9.2 37 144-182 2-38 (396)
263 TIGR00128 fabD malonyl CoA-acy 53.7 16 0.00034 33.6 3.8 31 199-230 72-103 (290)
264 PRK12595 bifunctional 3-deoxy- 49.5 1.2E+02 0.0026 29.1 9.1 77 138-220 222-299 (360)
265 cd07225 Pat_PNPLA6_PNPLA7 Pata 48.2 25 0.00055 32.9 4.2 62 155-231 2-64 (306)
266 PF01012 ETF: Electron transfe 47.3 1.3E+02 0.0028 24.9 8.1 79 141-231 33-113 (164)
267 PF00448 SRP54: SRP54-type pro 46.7 1E+02 0.0022 26.7 7.5 76 156-241 71-148 (196)
268 PRK13397 3-deoxy-7-phosphohept 45.8 1.5E+02 0.0033 26.8 8.6 42 138-179 119-160 (250)
269 cd07198 Patatin Patatin-like p 45.8 31 0.00068 29.0 4.1 34 198-232 15-48 (172)
270 PF00326 Peptidase_S9: Prolyl 45.7 53 0.0011 28.4 5.7 63 140-205 143-208 (213)
271 PRK10279 hypothetical protein; 45.7 31 0.00067 32.2 4.3 33 198-231 22-54 (300)
272 TIGR02764 spore_ybaN_pdaB poly 45.5 20 0.00044 30.7 3.0 34 142-175 152-188 (191)
273 cd04951 GT1_WbdM_like This fam 44.6 2.4E+02 0.0051 26.1 10.5 85 143-230 2-99 (360)
274 PF14488 DUF4434: Domain of un 44.5 84 0.0018 26.5 6.4 59 151-209 16-80 (166)
275 cd07207 Pat_ExoU_VipD_like Exo 44.1 34 0.00073 29.3 4.1 33 198-231 16-48 (194)
276 PF13439 Glyco_transf_4: Glyco 43.6 70 0.0015 26.0 6.0 88 149-242 10-109 (177)
277 TIGR03709 PPK2_rel_1 polyphosp 42.8 81 0.0018 28.8 6.4 73 139-223 53-127 (264)
278 PF04084 ORC2: Origin recognit 42.7 2.4E+02 0.0052 26.7 9.8 79 145-223 57-150 (326)
279 PRK06731 flhF flagellar biosyn 42.5 2.1E+02 0.0044 26.3 9.1 76 156-241 141-219 (270)
280 PRK14974 cell division protein 42.5 1.6E+02 0.0034 28.1 8.6 69 163-241 217-287 (336)
281 TIGR02873 spore_ylxY probable 42.3 32 0.0007 31.5 3.8 34 142-175 231-264 (268)
282 TIGR02884 spore_pdaA delta-lac 41.6 33 0.00072 30.4 3.7 35 141-175 186-221 (224)
283 TIGR03586 PseI pseudaminic aci 41.3 2.3E+02 0.005 26.8 9.4 83 138-230 131-214 (327)
284 PRK09936 hypothetical protein; 40.6 97 0.0021 28.7 6.5 52 153-209 36-87 (296)
285 TIGR00521 coaBC_dfp phosphopan 40.4 2.1E+02 0.0046 27.8 9.3 96 142-244 113-234 (390)
286 COG1752 RssA Predicted esteras 40.4 37 0.00081 31.7 4.1 34 198-232 28-61 (306)
287 cd07210 Pat_hypo_W_succinogene 40.1 46 0.00099 29.5 4.4 33 198-231 17-49 (221)
288 PRK14457 ribosomal RNA large s 40.1 2.1E+02 0.0045 27.4 9.0 79 143-228 259-337 (345)
289 cd07227 Pat_Fungal_NTE1 Fungal 39.8 45 0.00097 30.6 4.3 33 198-231 27-59 (269)
290 PF05576 Peptidase_S37: PS-10 39.6 33 0.00072 33.3 3.5 59 333-393 351-414 (448)
291 TIGR03707 PPK2_P_aer polyphosp 39.4 1.2E+02 0.0026 27.1 6.9 72 140-223 29-102 (230)
292 PRK00726 murG undecaprenyldiph 38.5 2.2E+02 0.0049 26.7 9.3 35 144-178 5-39 (357)
293 TIGR02816 pfaB_fam PfaB family 37.9 38 0.00082 34.5 3.8 32 199-231 254-286 (538)
294 PF10081 Abhydrolase_9: Alpha/ 37.6 44 0.00096 30.7 3.8 53 194-246 91-148 (289)
295 COG3340 PepE Peptidase E [Amin 36.6 1.4E+02 0.003 26.3 6.5 37 140-176 31-70 (224)
296 TIGR01425 SRP54_euk signal rec 36.4 2.7E+02 0.0059 27.5 9.3 70 161-240 175-246 (429)
297 COG0541 Ffh Signal recognition 36.1 1.7E+02 0.0038 28.8 7.7 69 163-241 177-247 (451)
298 TIGR01361 DAHP_synth_Bsub phos 35.8 2.6E+02 0.0056 25.5 8.6 74 138-220 129-206 (260)
299 cd07209 Pat_hypo_Ecoli_Z1214_l 35.6 53 0.0012 28.8 4.1 34 198-232 15-48 (215)
300 PRK05282 (alpha)-aspartyl dipe 35.1 1.1E+02 0.0024 27.4 6.0 38 140-177 30-70 (233)
301 cd03811 GT1_WabH_like This fam 34.9 3.4E+02 0.0074 24.4 11.7 84 143-229 2-101 (353)
302 KOG1200 Mitochondrial/plastidi 34.6 2E+02 0.0044 25.1 7.1 32 144-177 16-47 (256)
303 PHA02114 hypothetical protein 34.5 53 0.0011 24.8 3.1 33 143-175 84-116 (127)
304 cd07228 Pat_NTE_like_bacteria 34.3 65 0.0014 27.2 4.3 33 199-232 18-50 (175)
305 COG4822 CbiK Cobalamin biosynt 33.9 2E+02 0.0043 25.4 6.9 62 139-215 136-199 (265)
306 PF01583 APS_kinase: Adenylyls 33.4 86 0.0019 26.1 4.7 36 141-176 1-38 (156)
307 PRK11613 folP dihydropteroate 32.7 2.3E+02 0.005 26.2 7.8 59 157-224 165-225 (282)
308 cd07205 Pat_PNPLA6_PNPLA7_NTE1 32.5 78 0.0017 26.6 4.5 33 198-231 17-49 (175)
309 cd03016 PRX_1cys Peroxiredoxin 32.0 2.3E+02 0.005 24.5 7.5 90 141-244 26-126 (203)
310 PF03853 YjeF_N: YjeF-related 31.3 73 0.0016 26.8 4.1 38 138-175 22-59 (169)
311 COG2939 Carboxypeptidase C (ca 30.7 49 0.0011 33.0 3.2 28 363-391 462-489 (498)
312 KOG4306 Glycosylphosphatidylin 30.7 94 0.002 28.9 4.8 65 117-182 72-140 (306)
313 cd07211 Pat_PNPLA8 Patatin-lik 30.6 1.2E+02 0.0027 28.2 5.9 17 213-229 44-60 (308)
314 PRK10867 signal recognition pa 30.3 4.9E+02 0.011 25.8 10.1 71 160-240 175-247 (433)
315 PRK06849 hypothetical protein; 29.7 4.2E+02 0.0092 25.5 9.7 72 142-218 5-85 (389)
316 KOG2872 Uroporphyrinogen decar 28.7 2E+02 0.0044 26.6 6.4 71 141-218 252-336 (359)
317 COG3727 Vsr DNA G:T-mismatch r 28.6 1.1E+02 0.0025 24.6 4.3 35 140-174 56-114 (150)
318 PRK14456 ribosomal RNA large s 28.6 3.6E+02 0.0079 26.0 8.7 78 144-228 283-360 (368)
319 PF03205 MobB: Molybdopterin g 28.5 1.3E+02 0.0028 24.5 4.9 42 143-184 1-44 (140)
320 KOG1411 Aspartate aminotransfe 28.5 1.3E+02 0.0029 28.6 5.4 87 141-243 197-290 (427)
321 PF05724 TPMT: Thiopurine S-me 27.7 1.1E+02 0.0024 27.1 4.7 31 141-176 37-67 (218)
322 TIGR00959 ffh signal recogniti 27.5 4.6E+02 0.01 25.9 9.4 73 159-241 173-247 (428)
323 COG1506 DAP2 Dipeptidyl aminop 27.4 2E+02 0.0043 29.9 7.2 45 138-182 548-595 (620)
324 TIGR03569 NeuB_NnaB N-acetylne 27.4 4E+02 0.0086 25.3 8.6 82 138-230 130-215 (329)
325 cd05312 NAD_bind_1_malic_enz N 27.1 1.5E+02 0.0033 27.4 5.5 80 144-227 27-123 (279)
326 COG1576 Uncharacterized conser 27.0 1.6E+02 0.0036 24.4 5.1 56 160-227 60-115 (155)
327 PF02230 Abhydrolase_2: Phosph 26.9 1.6E+02 0.0035 25.6 5.7 57 141-205 155-214 (216)
328 PF11713 Peptidase_C80: Peptid 26.8 30 0.00066 28.9 0.9 48 175-222 60-116 (157)
329 cd07230 Pat_TGL4-5_like Triacy 26.7 57 0.0012 32.1 2.9 24 211-234 102-125 (421)
330 PRK14581 hmsF outer membrane N 26.7 1.2E+02 0.0027 31.7 5.5 80 139-218 46-143 (672)
331 PTZ00445 p36-lilke protein; Pr 26.7 3.1E+02 0.0067 24.2 7.1 25 153-177 27-51 (219)
332 PRK13256 thiopurine S-methyltr 25.9 74 0.0016 28.3 3.3 28 144-176 46-73 (226)
333 COG0482 TrmU Predicted tRNA(5- 25.4 2.1E+02 0.0046 27.4 6.3 60 142-208 5-64 (356)
334 KOG0781 Signal recognition par 25.3 2.1E+02 0.0046 28.6 6.3 70 162-241 460-538 (587)
335 cd07232 Pat_PLPL Patain-like p 25.1 38 0.00083 33.2 1.4 28 211-238 96-123 (407)
336 cd01715 ETF_alpha The electron 25.0 3.8E+02 0.0082 22.2 7.4 85 142-241 30-117 (168)
337 PRK03363 fixB putative electro 25.0 3.2E+02 0.007 25.7 7.4 60 162-231 42-103 (313)
338 KOG2805 tRNA (5-methylaminomet 24.8 2.5E+02 0.0055 26.4 6.4 63 141-208 6-68 (377)
339 TIGR02260 benz_CoA_red_B benzo 24.8 5.3E+02 0.011 25.3 9.2 39 140-179 265-303 (413)
340 KOG1202 Animal-type fatty acid 24.7 90 0.002 34.9 4.0 24 198-222 571-594 (2376)
341 PF01656 CbiA: CobQ/CobB/MinD/ 24.5 1.1E+02 0.0024 25.7 4.1 32 145-176 2-35 (195)
342 COG5441 Uncharacterized conser 24.5 5.4E+02 0.012 24.1 8.3 98 143-240 3-123 (401)
343 COG0159 TrpA Tryptophan syntha 24.4 3E+02 0.0065 25.2 6.8 76 138-229 92-168 (265)
344 TIGR00824 EIIA-man PTS system, 24.4 3.4E+02 0.0074 21.1 7.8 72 143-226 4-75 (116)
345 PF14253 AbiH: Bacteriophage a 24.2 68 0.0015 29.1 2.8 17 210-226 235-251 (270)
346 PF10605 3HBOH: 3HB-oligomer h 23.8 51 0.0011 33.7 1.9 34 212-245 287-321 (690)
347 PF04244 DPRP: Deoxyribodipyri 23.6 1.8E+02 0.0038 25.9 5.2 48 157-215 51-98 (224)
348 PRK06029 3-octaprenyl-4-hydrox 23.6 3.5E+02 0.0075 23.2 6.9 45 158-209 132-177 (185)
349 PRK10824 glutaredoxin-4; Provi 23.5 3.7E+02 0.0079 21.1 6.7 79 139-231 13-93 (115)
350 COG0337 AroB 3-dehydroquinate 23.5 5.3E+02 0.011 24.8 8.5 67 143-217 35-101 (360)
351 TIGR00632 vsr DNA mismatch end 23.3 1.7E+02 0.0036 23.1 4.4 37 138-174 53-113 (117)
352 TIGR02883 spore_cwlD N-acetylm 22.9 2E+02 0.0042 24.7 5.3 37 171-208 2-44 (189)
353 cd07224 Pat_like Patatin-like 22.8 1.3E+02 0.0028 26.8 4.3 35 198-232 16-51 (233)
354 PRK11889 flhF flagellar biosyn 22.8 5.9E+02 0.013 25.1 8.8 79 153-241 304-385 (436)
355 PRK08762 molybdopterin biosynt 22.7 5.1E+02 0.011 24.9 8.7 33 210-245 136-169 (376)
356 COG0331 FabD (acyl-carrier-pro 22.6 1.1E+02 0.0023 28.8 3.8 20 210-229 85-104 (310)
357 cd07229 Pat_TGL3_like Triacylg 22.5 81 0.0017 30.7 3.0 35 201-236 103-137 (391)
358 cd07231 Pat_SDP1-like Sugar-De 21.9 57 0.0012 30.7 1.8 22 211-232 97-118 (323)
359 PRK14462 ribosomal RNA large s 21.7 7E+02 0.015 23.9 9.2 79 143-228 267-345 (356)
360 COG1087 GalE UDP-glucose 4-epi 21.7 5.4E+02 0.012 24.2 7.9 86 158-245 14-120 (329)
361 cd07212 Pat_PNPLA9 Patatin-lik 21.5 1.3E+02 0.0028 28.3 4.1 19 213-231 35-53 (312)
362 cd01635 Glycosyltransferase_GT 21.4 3.5E+02 0.0075 22.7 6.8 54 151-225 13-66 (229)
363 cd07208 Pat_hypo_Ecoli_yjju_li 21.4 1.4E+02 0.003 27.1 4.3 36 198-233 15-50 (266)
364 PF01075 Glyco_transf_9: Glyco 21.4 1.5E+02 0.0032 26.3 4.4 38 138-175 102-144 (247)
365 COG1255 Uncharacterized protei 21.1 98 0.0021 24.4 2.6 22 156-177 24-45 (129)
366 PRK07206 hypothetical protein; 20.7 5E+02 0.011 25.1 8.4 81 142-229 3-90 (416)
367 cd03823 GT1_ExpE7_like This fa 20.7 6.4E+02 0.014 22.8 10.4 36 143-178 2-42 (359)
368 PRK07313 phosphopantothenoylcy 20.7 3.2E+02 0.0069 23.3 6.1 60 140-204 112-179 (182)
369 PRK14455 ribosomal RNA large s 20.6 6.1E+02 0.013 24.3 8.6 78 144-228 267-344 (356)
370 TIGR00048 radical SAM enzyme, 20.6 6.2E+02 0.013 24.3 8.6 80 143-229 262-341 (355)
371 PF10489 RFPL3_antisense: Ret 20.5 48 0.001 25.2 0.8 10 1-10 1-10 (124)
372 TIGR00365 monothiol glutaredox 20.3 3.8E+02 0.0081 20.0 6.6 79 139-231 10-90 (97)
373 TIGR00064 ftsY signal recognit 20.3 6.7E+02 0.014 22.9 9.3 69 163-241 149-225 (272)
374 PF12242 Eno-Rase_NADH_b: NAD( 20.0 1.2E+02 0.0026 22.0 2.7 24 207-231 38-61 (78)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=3.5e-33 Score=255.76 Aligned_cols=247 Identities=38% Similarity=0.652 Sum_probs=166.9
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
.|||+||++.+.+.|..+++.|.+.||+|+++|+||||.|+.+....++++++++++.++++.++..++++||||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 59999999999999999999998878999999999999998655446789999999999999998634999999999999
Q ss_pred HHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCch
Q 016103 223 CISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPA 302 (395)
Q Consensus 223 ~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (395)
+++.++.++|++|+++|++++.....+......+...... . .....+.......................++.....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG--T-EKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL 161 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc--c-ccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH
Confidence 9999999999999999999986432221111111000000 0 000000000000000000011111222222232222
Q ss_pred HHHHHHhhhcccCCChhhHhhhhc-cccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccChHH
Q 016103 303 KDIALASVSMRHIPFAPVLEKLSL-SDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKPQA 381 (395)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~ 381 (395)
.........+.............. .....+++|+++|+|++|.++|++..+.+.+.++++++++++++||++++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~ 241 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTT 241 (255)
T ss_pred HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHH
Confidence 222222222222212111111001 1233568999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 016103 382 LHKLLVEISKL 392 (395)
Q Consensus 382 v~~~I~~fl~~ 392 (395)
|++.|.+|++.
T Consensus 242 v~~~l~~~~~~ 252 (255)
T PLN02965 242 LFQYLLQAVSS 252 (255)
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.3e-31 Score=248.90 Aligned_cols=243 Identities=18% Similarity=0.187 Sum_probs=162.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC------CCccChhhhHHHHHHHHHHCCCCCcEE
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT------NGITSLSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
++++|||+||++++...|..+++.|+++ |+|+++|+||||.|+.+. ...++++++++++.+++++++.+ +++
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~ 105 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGD-PAF 105 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCC-CeE
Confidence 4689999999999999999999999987 899999999999998643 13589999999999999999996 999
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCC---c-----chhHHhhhcCCchH----HHH------HHHHHHhh
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNG---Q-----NLLDMFSQQTGSTD----LMR------QAQIFLYA 275 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~---~-----~~~~~~~~~~~~~~----~~~------~~~~~~~~ 275 (395)
|+||||||++++.+|.++|++|+++|++++...... . .....+........ +.. .....+..
T Consensus 106 lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQ 185 (294)
T ss_pred EEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHH
Confidence 999999999999999999999999999998642210 0 00000100000000 000 00000000
Q ss_pred cCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHH
Q 016103 276 NGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSM 355 (395)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l 355 (395)
..... ..........+................+....... .......+++|+|+|+|++|.++|.+..+.+
T Consensus 186 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 256 (294)
T PLN02824 186 CYHDD----SAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPL-----PEELLPAVKCPVLIAWGEKDPWEPVELGRAY 256 (294)
T ss_pred hccCh----hhccHHHHHHHHhccCCchHHHHHHHHhccccccc-----hHHHHhhcCCCeEEEEecCCCCCChHHHHHH
Confidence 00000 00111111111111100000000000000000000 0011234579999999999999999999999
Q ss_pred HhhCCCCeEEEecCCCCCCcccChHHHHHHHHHHhcCC
Q 016103 356 INSSPPEKVFRLKGADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 356 ~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
.+.++++++++++++||++++|+|++|++.|.+|++++
T Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 257 ANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 88888899999999999999999999999999999864
No 3
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=6e-31 Score=242.94 Aligned_cols=252 Identities=38% Similarity=0.659 Sum_probs=173.5
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
++++|+|||+||++.+.+.|..++..|.+.||+|+++|+||||.|.......++++++++++.++++.++..++++||||
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 46678999999999999999999999998899999999999998865444457999999999999999853249999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHH--HHhhcCCCCCCcchhhhHHHHHHH
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQI--FLYANGNNKPPTAIDLDKSLLKEL 295 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 295 (395)
||||++++.++.++|++|+++|++++.....+......+... .......... ........................
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDG--VPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI 172 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhcc--ccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH
Confidence 999999999999999999999999886543332222111110 0000000000 000000000001111222333444
Q ss_pred hcCCCchHHHHHHhhhcccCCChhhHhhhhcc-ccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCC
Q 016103 296 LFNQSPAKDIALASVSMRHIPFAPVLEKLSLS-DMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSP 374 (395)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~ 374 (395)
++...+..........++......+....... ...+.++|+++|.|++|.++|++.++.+.+.+++.+++.++ +||.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p 251 (273)
T PLN02211 173 LYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSP 251 (273)
T ss_pred HhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCc
Confidence 55555544444443333332222221111101 12234799999999999999999999999999999999997 89999
Q ss_pred cccChHHHHHHHHHHhcC
Q 016103 375 FFSKPQALHKLLVEISKL 392 (395)
Q Consensus 375 ~~e~p~~v~~~I~~fl~~ 392 (395)
++++|++|++.|.++...
T Consensus 252 ~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 252 FFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 999999999999998764
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.98 E-value=3.3e-31 Score=248.74 Aligned_cols=245 Identities=16% Similarity=0.135 Sum_probs=162.4
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
++|+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+.. ..++++++++++.+++++++.+ +++|+|||
T Consensus 45 ~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~v~lvGhS 123 (302)
T PRK00870 45 DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLT-DVTLVCQD 123 (302)
T ss_pred CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCC-CEEEEEEC
Confidence 478999999999999999999999998899999999999999976542 3578999999999999999996 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcch---hHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHH
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNL---LDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKEL 295 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (395)
|||.+|+.+|.++|++|.++|++++......... ............. .....++.. ... ..........+
T Consensus 124 ~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~-----~~~~~~~~~~~ 196 (302)
T PRK00870 124 WGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPV-LPVGRLVNG-GTV-----RDLSDAVRAAY 196 (302)
T ss_pred hHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCch-hhHHHHhhc-ccc-----ccCCHHHHHHh
Confidence 9999999999999999999999997543211100 1100000000000 000000000 000 00011111111
Q ss_pred hcCCCchHHHH---HHhhhcc-cC--CChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCe---EEE
Q 016103 296 LFNQSPAKDIA---LASVSMR-HI--PFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEK---VFR 366 (395)
Q Consensus 296 ~~~~~~~~~~~---~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~---~~~ 366 (395)
.......... .....+. .. ................+++|+++|+|++|.++|... +.+.+.+++.+ +.+
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~ 274 (302)
T PRK00870 197 -DAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPT 274 (302)
T ss_pred -hcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceee
Confidence 0000000000 0000000 00 000000000112234568999999999999999866 88999999876 889
Q ss_pred ecCCCCCCcccChHHHHHHHHHHhcCCC
Q 016103 367 LKGADHSPFFSKPQALHKLLVEISKLPS 394 (395)
Q Consensus 367 i~~~GH~~~~e~p~~v~~~I~~fl~~~~ 394 (395)
++++||++++|+|++|++.|.+|++.+|
T Consensus 275 i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 302 (302)
T PRK00870 275 IKGAGHFLQEDSGEELAEAVLEFIRATP 302 (302)
T ss_pred ecCCCccchhhChHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999875
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=5.7e-30 Score=245.76 Aligned_cols=241 Identities=19% Similarity=0.214 Sum_probs=158.0
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
.+|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.+....++++++++++.+++++++.+ +++||||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~ 164 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK-PTVLIGNSV 164 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC-CeEEEEECH
Confidence 348999999999999999999999987 699999999999999876545689999999999999999996 999999999
Q ss_pred hHHHHHHHHHH-CCCCcceEEEEcccccCCCcchhHH-hhh-cCCc-------------h-HHHH------HHHHHHhhc
Q 016103 220 GGACISYAMEL-FPFKISKAVFIAAAMLTNGQNLLDM-FSQ-QTGS-------------T-DLMR------QAQIFLYAN 276 (395)
Q Consensus 220 Gg~~a~~~a~~-~p~~V~~lVli~~~~~~~~~~~~~~-~~~-~~~~-------------~-~~~~------~~~~~~~~~ 276 (395)
||.+++.++.. +|++|+++|++++............ ... .... . .+.. ....++..
T Consensus 165 Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (360)
T PLN02679 165 GSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLS- 243 (360)
T ss_pred HHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHH-
Confidence 99999998874 7999999999998643211100000 000 0000 0 0000 00000000
Q ss_pred CCCCCCcchhhhHHHHHHHhc--CCCchHHHHHHhhh-cccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHH--
Q 016103 277 GNNKPPTAIDLDKSLLKELLF--NQSPAKDIALASVS-MRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIAL-- 351 (395)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~-- 351 (395)
...... ............ .............. ....+... ....+++|+|+|+|++|.++|++.
T Consensus 244 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~i~~PtLii~G~~D~~~p~~~~~ 312 (360)
T PLN02679 244 VYGNKE---AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIK--------LIPRISLPILVLWGDQDPFTPLDGPV 312 (360)
T ss_pred hccCcc---cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHH--------HhhhcCCCEEEEEeCCCCCcCchhhH
Confidence 000000 000111110000 00000000000000 00011111 123457999999999999998763
Q ss_pred ---HHHHHhhCCCCeEEEecCCCCCCcccChHHHHHHHHHHhcCCC
Q 016103 352 ---QQSMINSSPPEKVFRLKGADHSPFFSKPQALHKLLVEISKLPS 394 (395)
Q Consensus 352 ---~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~~ 394 (395)
.+.+.+.++++++++++++||++++|+|++|++.|.+||++.+
T Consensus 313 ~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~~ 358 (360)
T PLN02679 313 GKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQLP 358 (360)
T ss_pred HHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhcC
Confidence 3457778899999999999999999999999999999998754
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=2.2e-30 Score=240.03 Aligned_cols=237 Identities=13% Similarity=0.125 Sum_probs=159.8
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.+++++++++ +++|+||||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l~~~-~~~LvG~S~ 100 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYLDYG-QVNAIGVSW 100 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHhCcC-ceEEEEECH
Confidence 4579999999999999999999999885 999999999999998643 4578999999999999999986 999999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccccCCCcc-hhHHhhhcCCchHHHHH-----HHHHHhhcCCCCCCcchhhhHHHHH
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAMLTNGQN-LLDMFSQQTGSTDLMRQ-----AQIFLYANGNNKPPTAIDLDKSLLK 293 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (395)
||.+++.+|.++|++|+++|+++++....... ................. ....++.......+. ... ...
T Consensus 101 GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~ 176 (276)
T TIGR02240 101 GGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPE---LAM-AHA 176 (276)
T ss_pred HHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccch---hhh-hhh
Confidence 99999999999999999999999875321100 00000000000000000 000000000000000 000 000
Q ss_pred HHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCC
Q 016103 294 ELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHS 373 (395)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~ 373 (395)
....... ................ ......+++|+|+|+|++|+++|++..+.+.+.+++++++++++ ||+
T Consensus 177 ~~~~~~~-~~~~~~~~~~~~~~~~--------~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~ 246 (276)
T TIGR02240 177 SKVRSGG-KLGYYWQLFAGLGWTS--------IHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHL 246 (276)
T ss_pred hhcccCC-CchHHHHHHHHcCCch--------hhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCc
Confidence 0000000 0000000000000000 11134557999999999999999999999999999999999985 999
Q ss_pred CcccChHHHHHHHHHHhcCC
Q 016103 374 PFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 374 ~~~e~p~~v~~~I~~fl~~~ 393 (395)
+++|+|+++++.|.+|+++.
T Consensus 247 ~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 247 FLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hhhccHHHHHHHHHHHHHHh
Confidence 99999999999999999864
No 7
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=2e-29 Score=230.87 Aligned_cols=233 Identities=23% Similarity=0.295 Sum_probs=151.6
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChh
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFG 220 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 220 (395)
.|+|||+||++++...|..++..|.++ |+|+++|+||||.|+.+ ..++++++++++. ++..+ +++|||||||
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~----~~~~~-~~~lvGhS~G 84 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF--GALSLADMAEAVL----QQAPD-KAIWLGWSLG 84 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC--CCCCHHHHHHHHH----hcCCC-CeEEEEECHH
Confidence 357999999999999999999999886 99999999999999753 2367777776655 35564 9999999999
Q ss_pred HHHHHHHHHHCCCCcceEEEEcccccCCCcch--------hHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHH
Q 016103 221 GACISYAMELFPFKISKAVFIAAAMLTNGQNL--------LDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLL 292 (395)
Q Consensus 221 g~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (395)
|.+|+.+|.++|++|+++|++++.+....... ...+.... ..........++....... ........ .+
T Consensus 85 g~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~ 161 (256)
T PRK10349 85 GLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQL-SDDFQRTVERFLALQTMGT-ETARQDAR-AL 161 (256)
T ss_pred HHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHH-HhchHHHHHHHHHHHHccC-chHHHHHH-HH
Confidence 99999999999999999999988543211100 00000000 0000001111110000000 00000000 11
Q ss_pred HHHhcCCC-c-hHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCC
Q 016103 293 KELLFNQS-P-AKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGA 370 (395)
Q Consensus 293 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~ 370 (395)
...+.... . ..........+...+.... ...+++|+|+|+|++|.++|.+..+.+.+.++++++++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~ 233 (256)
T PRK10349 162 KKTVLALPMPEVDVLNGGLEILKTVDLRQP--------LQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFAKA 233 (256)
T ss_pred HHHhhccCCCcHHHHHHHHHHHHhCccHHH--------HhhcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeCCC
Confidence 11111100 0 0000000011111222222 234579999999999999999999999999999999999999
Q ss_pred CCCCcccChHHHHHHHHHHhcC
Q 016103 371 DHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 371 GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
||++++|+|++|++.|.+|-.+
T Consensus 234 gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 234 AHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999999999764
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=6.3e-30 Score=239.26 Aligned_cols=249 Identities=14% Similarity=0.160 Sum_probs=158.2
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.+++++++.+ +++|+|||
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l~~~-~~~lvGhS 101 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFDALGLD-DVVLVGHD 101 (295)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC-CeEEEEEC
Confidence 35689999999999999999999999998 699999999999998764 3479999999999999999996 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcchh-----HHhh--hcCC-chHHHHHHHHHHhhcCCCCCCcchhhhHH
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNLL-----DMFS--QQTG-STDLMRQAQIFLYANGNNKPPTAIDLDKS 290 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~-----~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (395)
|||.+|+.++.++|++|+++|++++.......... ..+. .... ..........+... ... ......+..+
T Consensus 102 ~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 179 (295)
T PRK03592 102 WGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIER-VLP-GSILRPLSDE 179 (295)
T ss_pred HHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhh-ccc-CcccccCCHH
Confidence 99999999999999999999999984322110000 0000 0000 00000000000000 000 0000001111
Q ss_pred HHHHH---hcCCCchHH-HHHHhhhcccCCCh---hhHhhhhccccccCCccEEEEEcCCCCccCH-HHHHHHHhhCCCC
Q 016103 291 LLKEL---LFNQSPAKD-IALASVSMRHIPFA---PVLEKLSLSDMKYGSVRRFYIETPEDNAIPI-ALQQSMINSSPPE 362 (395)
Q Consensus 291 ~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~-~~~~~l~~~l~~~ 362 (395)
.+..+ +........ ..+........... ...... ......+++|+|+|+|++|.++++ ...+.+.+.++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~ 258 (295)
T PRK03592 180 EMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEY-AQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQL 258 (295)
T ss_pred HHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHh-HHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhc
Confidence 11111 000000000 00000000000000 000000 112345689999999999999954 4444555667899
Q ss_pred eEEEecCCCCCCcccChHHHHHHHHHHhcCC
Q 016103 363 KVFRLKGADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 363 ~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
++++++++||++++|+|+++++.|.+|+++.
T Consensus 259 ~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 259 EITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred ceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999864
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=2.9e-29 Score=232.90 Aligned_cols=242 Identities=15% Similarity=0.209 Sum_probs=154.4
Q ss_pred CCCCeEEEEcCCCCChhhHHH---HHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEE
Q 016103 139 LETNHFVLVHGGGFGAWCWYK---TIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILV 215 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~---~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 215 (395)
+++|+|||+||++.+...|.. .+..|.+.||+|+++|+||||.|+.+.........+++++.+++++++.+ +++++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~lv 106 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIE-KAHLV 106 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCC-CeeEE
Confidence 467899999999988887764 34566677899999999999999865322222235689999999999996 99999
Q ss_pred EeChhHHHHHHHHHHCCCCcceEEEEcccccCCC----c--chhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhH
Q 016103 216 GHDFGGACISYAMELFPFKISKAVFIAAAMLTNG----Q--NLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDK 289 (395)
Q Consensus 216 GhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (395)
||||||++++.+|.++|++|+++|++++...... . .....+....... .......++...... ... ...
T Consensus 107 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~---~~~ 181 (282)
T TIGR03343 107 GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEP-SYETLKQMLNVFLFD-QSL---ITE 181 (282)
T ss_pred EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCC-CHHHHHHHHhhCccC-ccc---CcH
Confidence 9999999999999999999999999997532110 0 0000000000000 000011111100000 000 000
Q ss_pred HHHHHHhcC-CCchHHHHHHhhhc--ccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEE
Q 016103 290 SLLKELLFN-QSPAKDIALASVSM--RHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFR 366 (395)
Q Consensus 290 ~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~ 366 (395)
......+.. .............. ......... .....+++|+|+|+|++|.++|++..+.+++.+|++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~ 256 (282)
T TIGR03343 182 ELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVT-----ARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHV 256 (282)
T ss_pred HHHHhHHHHhhcCHHHHHHHHHhccccccccchHH-----HHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEE
Confidence 111100000 00000000000000 000000011 1123457999999999999999999999999999999999
Q ss_pred ecCCCCCCcccChHHHHHHHHHHhc
Q 016103 367 LKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 367 i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
++++||++++|+|++|++.|.+||+
T Consensus 257 i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 257 FSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred eCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999999999999999986
No 10
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=1.7e-29 Score=235.07 Aligned_cols=246 Identities=14% Similarity=0.155 Sum_probs=159.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+++++|||+||++.+...|..++..|.+. |+|+++|+||||.|+.+....++++++++++.+++++++.+ +++++|||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvG~S 109 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLD-RYLSMGQD 109 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCC-CEEEEEEC
Confidence 35689999999999999999999999875 99999999999999876554578999999999999999986 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHh---hhc-CCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMF---SQQ-TGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
|||.+++.++..+|++|+++|++++............+ ... .....+.. ..++......... ...........
T Consensus 110 ~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~ 186 (286)
T PRK03204 110 WGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR--RNFFVERLIPAGT-EHRPSSAVMAH 186 (286)
T ss_pred ccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhh--hhHHHHHhccccc-cCCCCHHHHHH
Confidence 99999999999999999999998875422111000001 000 00000000 0000000000000 00011111111
Q ss_pred HhcCCCchHH-HHHH--hhhcccCCChhhHhhhhccc-cccCCccEEEEEcCCCCccCHH-HHHHHHhhCCCCeEEEecC
Q 016103 295 LLFNQSPAKD-IALA--SVSMRHIPFAPVLEKLSLSD-MKYGSVRRFYIETPEDNAIPIA-LQQSMINSSPPEKVFRLKG 369 (395)
Q Consensus 295 ~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~PvliI~G~~D~~vp~~-~~~~l~~~l~~~~~~~i~~ 369 (395)
+......... .... ...+. .....+..+.... ...+++|+++|+|++|.++++. ..+.+.+.+|+.+++++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~ 264 (286)
T PRK03204 187 YRAVQPNAAARRGVAEMPKQIL--AARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPN 264 (286)
T ss_pred hcCCCCCHHHHHHHHHHHHhcc--hhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCC
Confidence 1111111000 0000 00000 0111111111000 0112799999999999988654 5788999999999999999
Q ss_pred CCCCCcccChHHHHHHHHHHhc
Q 016103 370 ADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 370 ~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
+||++++|+|+++++.|.+||.
T Consensus 265 aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 265 AKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred CcccccccCHHHHHHHHHHhcC
Confidence 9999999999999999999984
No 11
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=9.9e-29 Score=224.94 Aligned_cols=242 Identities=17% Similarity=0.228 Sum_probs=162.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
.++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|..+....++++++++++.+++++++.+ +++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-RFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC-cEEEEEec
Confidence 4578999999999999999999998887 599999999999999876566689999999999999999986 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcch--hHHh---hhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHH
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNL--LDMF---SQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLK 293 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (395)
|||++|+.++.++|++|+++|++++......... .... ...............+.+.... .............
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~- 166 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADW-ISENAARLAADEA- 166 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccH-hhccchhhhhhhh-
Confidence 9999999999999999999999998654321100 0000 0000000000000000000000 0000000000000
Q ss_pred HHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCC
Q 016103 294 ELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHS 373 (395)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~ 373 (395)
..................+...+... ....+++|+++++|++|.++|++..+.+.+.+++.++++++++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 238 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSA--------RLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHA 238 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHH--------HhcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCC
Confidence 00000000000000001111111111 1234579999999999999999999999999999999999999999
Q ss_pred CcccChHHHHHHHHHHhcC
Q 016103 374 PFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 374 ~~~e~p~~v~~~I~~fl~~ 392 (395)
+++++|+++++.|.+||++
T Consensus 239 ~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 239 SNVTDPETFNRALLDFLKT 257 (257)
T ss_pred ccccCHHHHHHHHHHHhcC
Confidence 9999999999999999963
No 12
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=2e-29 Score=227.50 Aligned_cols=247 Identities=17% Similarity=0.218 Sum_probs=170.2
Q ss_pred CCCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEEEE
Q 016103 137 PDLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVILV 215 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lv 215 (395)
..+++|.|+++||++....+|+.....|+.+||+|+++|+||+|.|+.|.. ..|++..++.|+..+|++++.+ +++++
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~-k~~lv 118 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLK-KAFLV 118 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccc-eeEEE
Confidence 466899999999999999999999999999999999999999999999887 7899999999999999999986 99999
Q ss_pred EeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHh------------hhcCCc-hH-----HHHHHHHHHhhcC
Q 016103 216 GHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMF------------SQQTGS-TD-----LMRQAQIFLYANG 277 (395)
Q Consensus 216 GhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~------------~~~~~~-~~-----~~~~~~~~~~~~~ 277 (395)
||+||+++|..+|..+|++|+++|+++.+.........+.+ .+.... +. ..+.....++...
T Consensus 119 gHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~ 198 (322)
T KOG4178|consen 119 GHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRK 198 (322)
T ss_pred eccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccc
Confidence 99999999999999999999999999988763222111111 111111 10 1111111111111
Q ss_pred CCCCCcch---hhhHHHHHHHhcCCCchHHHHHHhhhc------ccCCChhhHhhh---hccccccCCccEEEEEcCCCC
Q 016103 278 NNKPPTAI---DLDKSLLKELLFNQSPAKDIALASVSM------RHIPFAPVLEKL---SLSDMKYGSVRRFYIETPEDN 345 (395)
Q Consensus 278 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~~~~~~~~~~PvliI~G~~D~ 345 (395)
...+.... ... ..+ ...++.......+ ...++...+..- .......+.+|+++|+|+.|.
T Consensus 199 ~~~~~~~~~~~~~~-----~~w---~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~ 270 (322)
T KOG4178|consen 199 TPGPLIVPKQPNEN-----PLW---LTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDP 270 (322)
T ss_pred cCCccccCCCCCCc-----cch---hhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcc
Confidence 11000000 000 000 0011111111111 011111111111 122345668999999999999
Q ss_pred ccCHH-HHHHHHhhCCCC-eEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 346 AIPIA-LQQSMINSSPPE-KVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 346 ~vp~~-~~~~l~~~l~~~-~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+.+.. ..+.+.+.+++. +.++++|+||+++.|+|++|++.|.+|+++
T Consensus 271 v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 271 VLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred cccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 99865 556677777876 788999999999999999999999999975
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.96 E-value=6e-29 Score=227.30 Aligned_cols=234 Identities=17% Similarity=0.181 Sum_probs=159.7
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
...+|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.+++++++.+ +++|+||
T Consensus 13 ~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~~~-~~~lvGh 88 (255)
T PRK10673 13 PHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQIE-KATFIGH 88 (255)
T ss_pred CCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCCC-ceEEEEE
Confidence 35678999999999999999999999987 5999999999999997543 479999999999999999986 8999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhc
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLF 297 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (395)
||||.+++.+|.++|++|+++|++++.+..........+ ......... ... .........+...+
T Consensus 89 S~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~----~~~~~~~~~~~~~~- 153 (255)
T PRK10673 89 SMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEI---------FAAINAVSE-AGA----TTRQQAAAIMRQHL- 153 (255)
T ss_pred CHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHH---------HHHHHHhhh-ccc----ccHHHHHHHHHHhc-
Confidence 999999999999999999999999865432111000000 000000000 000 00000000000000
Q ss_pred CCCchHHHHHHhhhcccCCC-------hhhHhhh-hccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecC
Q 016103 298 NQSPAKDIALASVSMRHIPF-------APVLEKL-SLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKG 369 (395)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~ 369 (395)
............+..... ......+ .......+++|+|+|+|++|..++.+..+.+.+.++++++.++++
T Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (255)
T PRK10673 154 --NEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAG 231 (255)
T ss_pred --CCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCC
Confidence 000000000000000000 0000111 011233457999999999999999999999999999999999999
Q ss_pred CCCCCcccChHHHHHHHHHHhcC
Q 016103 370 ADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 370 ~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+||++++++|+++++.|.+||+.
T Consensus 232 ~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999999999999975
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=4e-28 Score=237.05 Aligned_cols=247 Identities=12% Similarity=0.105 Sum_probs=157.7
Q ss_pred CCeEEEEcCCCCChhhHHH-HHHHHH---hCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHH-HHHHHCCCCCcEEEE
Q 016103 141 TNHFVLVHGGGFGAWCWYK-TIALLE---EGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLT-DFLEKLPDAEKVILV 215 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~-~~~~L~---~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~-~~l~~l~~~~~v~lv 215 (395)
+|+|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+....++++++++++. .++++++.+ +++|+
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~-k~~LV 279 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVK-SFHIV 279 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCC-CEEEE
Confidence 5799999999999999985 456665 35899999999999999876556689999999994 899999996 99999
Q ss_pred EeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcch--hHH-hhh---cCC-----chHHHHHHHHHHhhcCCCCCCcc
Q 016103 216 GHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNL--LDM-FSQ---QTG-----STDLMRQAQIFLYANGNNKPPTA 284 (395)
Q Consensus 216 GhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~--~~~-~~~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
||||||++++.+|.++|++|+++|+++++........ ... ... ... .......+...............
T Consensus 280 GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 359 (481)
T PLN03087 280 AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKN 359 (481)
T ss_pred EECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccc
Confidence 9999999999999999999999999997643221110 000 000 000 00000000000000000000000
Q ss_pred hhhhHHHHHHHhcCCCchHHHH-------------HHhhhcccC--CChhhHhhhhccccccCCccEEEEEcCCCCccCH
Q 016103 285 IDLDKSLLKELLFNQSPAKDIA-------------LASVSMRHI--PFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPI 349 (395)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~ 349 (395)
.. ....+...+.......... ......... .....+.. ....+++|+|+|+|++|.++|+
T Consensus 360 ~~-~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~----l~~~I~vPtLII~Ge~D~ivP~ 434 (481)
T PLN03087 360 HR-LWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH----VRDQLKCDVAIFHGGDDELIPV 434 (481)
T ss_pred hH-HHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH----HHHhCCCCEEEEEECCCCCCCH
Confidence 00 0000000000000000000 000000000 00000110 0123579999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCCCcc-cChHHHHHHHHHHhcCC
Q 016103 350 ALQQSMINSSPPEKVFRLKGADHSPFF-SKPQALHKLLVEISKLP 393 (395)
Q Consensus 350 ~~~~~l~~~l~~~~~~~i~~~GH~~~~-e~p~~v~~~I~~fl~~~ 393 (395)
+..+.+++.+|++++++++++||++++ |+|+++++.|.+|....
T Consensus 435 ~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 435 ECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999999886 99999999999998764
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.96 E-value=1.9e-28 Score=226.42 Aligned_cols=238 Identities=17% Similarity=0.196 Sum_probs=160.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
.+|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+....++++++++++.+++++++.+ +++|+||||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~lvG~S~ 104 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLS-PDGVIGHSA 104 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCC-CceEEEECc
Confidence 468999999999999999999999987 599999999999999876655689999999999999999885 999999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccccCCCcc------hhHHh-hhcCCchHHHHH-------HHHHHhhcCCCCCCcch
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAMLTNGQN------LLDMF-SQQTGSTDLMRQ-------AQIFLYANGNNKPPTAI 285 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~------~~~~~-~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 285 (395)
||.+++.+|.++|++++++|++++........ ..... ............ ...+.........
T Consensus 105 Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 180 (278)
T TIGR03056 105 GAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGSLLD---- 180 (278)
T ss_pred cHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhccccccc----
Confidence 99999999999999999999998864321100 00000 000000000000 0000000000000
Q ss_pred hhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEE
Q 016103 286 DLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVF 365 (395)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~ 365 (395)
..........+..... .......+......... .....+++|+++|+|++|.++|.+..+.+.+.+++.+++
T Consensus 181 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-----~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~ 252 (278)
T TIGR03056 181 KAGMTYYGRLIRSPAH---VDGALSMMAQWDLAPLN-----RDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLH 252 (278)
T ss_pred cchhhHHHHhhcCchh---hhHHHHHhhcccccchh-----hhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEE
Confidence 0000001100000000 00000000000110001 123346799999999999999999999999999999999
Q ss_pred EecCCCCCCcccChHHHHHHHHHHhc
Q 016103 366 RLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 366 ~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
+++++||++++|+|+++++.|.+|++
T Consensus 253 ~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 253 VVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999985
No 16
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=3.8e-28 Score=219.56 Aligned_cols=237 Identities=17% Similarity=0.266 Sum_probs=160.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
++|+|||+||++.+...|..+++.|.. ||+|+++|+||||.|+.+. ..++++++++++.++++.++.+ +++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~-~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGIE-RAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 568999999999999999999999875 7999999999999997543 4578999999999999999886 999999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccccCCCcc-hhHHhhhc--CCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHh
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAMLTNGQN-LLDMFSQQ--TGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELL 296 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (395)
||++++.+|.++|++|+++|++++........ +....... .............++...... .. ......+...+
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 165 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFRE-AH--PARLDLYRNML 165 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHccccccc-CC--hHHHHHHHHHH
Confidence 99999999999999999999998764322211 11111000 000111111100011000000 00 00001111111
Q ss_pred cCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 016103 297 FNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFF 376 (395)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~ 376 (395)
.... ..........+...+.... ...+++|+++|+|++|.++|.+..+.+.+.+++.++++++++||++++
T Consensus 166 ~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR02427 166 VRQP-PDGYAGCCAAIRDADFRDR--------LGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCV 236 (251)
T ss_pred HhcC-HHHHHHHHHHHhcccHHHH--------hhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccc
Confidence 1111 1111111111111111111 233479999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHhc
Q 016103 377 SKPQALHKLLVEISK 391 (395)
Q Consensus 377 e~p~~v~~~I~~fl~ 391 (395)
++|+++.+.|.+|++
T Consensus 237 ~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 237 EQPEAFNAALRDFLR 251 (251)
T ss_pred cChHHHHHHHHHHhC
Confidence 999999999999984
No 17
>PLN02578 hydrolase
Probab=99.96 E-value=9.7e-28 Score=229.99 Aligned_cols=239 Identities=20% Similarity=0.243 Sum_probs=158.3
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+++++|||+||++++...|..++..|++. |+|+++|+||||.|+.+. ..++.+.+++++.++++.+..+ +++++|||
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~~~~-~~~lvG~S 160 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEVVKE-PAVLVGNS 160 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhccC-CeEEEEEC
Confidence 36789999999999999999999999874 999999999999998764 3578999999999999999875 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcch--hH-------Hhhh--cCCchHHHHH-HHHHHhhcCCCCCCcch-
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNL--LD-------MFSQ--QTGSTDLMRQ-AQIFLYANGNNKPPTAI- 285 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~--~~-------~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~- 285 (395)
+||++++.+|.++|++|+++|++++......... .. .... .......... ...+.+... ..+...
T Consensus 161 ~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 238 (354)
T PLN02578 161 LGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQA--KQPSRIE 238 (354)
T ss_pred HHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHh--cCHHHHH
Confidence 9999999999999999999999987643221100 00 0000 0000000000 000000000 000000
Q ss_pred -----------hhhHHHHHHHhcCCC---chHHHH-HHhhhcc---cCCChhhHhhhhccccccCCccEEEEEcCCCCcc
Q 016103 286 -----------DLDKSLLKELLFNQS---PAKDIA-LASVSMR---HIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAI 347 (395)
Q Consensus 286 -----------~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~v 347 (395)
............... ...... .....+. ..+... ....+++|+++|+|++|.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~i~~PvLiI~G~~D~~v 310 (354)
T PLN02578 239 SVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDS--------LLSKLSCPLLLLWGDLDPWV 310 (354)
T ss_pred HHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHH--------HhhcCCCCEEEEEeCCCCCC
Confidence 000000000000000 000000 0000000 011111 12345799999999999999
Q ss_pred CHHHHHHHHhhCCCCeEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 348 PIALQQSMINSSPPEKVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 348 p~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
|.+..+.+.+.+++++++++ ++||++++|+|+++++.|.+|++
T Consensus 311 ~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 311 GPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999999 58999999999999999999986
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=1e-27 Score=229.78 Aligned_cols=246 Identities=18% Similarity=0.183 Sum_probs=161.3
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CccChhhhHHHHHHHHHHCCCCCcEEEE
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN---GITSLSQYVKPLTDFLEKLPDAEKVILV 215 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~lv 215 (395)
.++|+|||+||++.+...|+.++..|++ +|+|+++|+||||.|+.+.. ..++++++++++..++++++++ +++|+
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~-~~~Lv 202 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD-KVSLV 202 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC-CceEE
Confidence 3578999999999999999999999987 69999999999999987643 2579999999999999999996 99999
Q ss_pred EeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcch---hHHhhhcCCchHHH-----HHHHHHHhhcCCCCCCcchhh
Q 016103 216 GHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNL---LDMFSQQTGSTDLM-----RQAQIFLYANGNNKPPTAIDL 287 (395)
Q Consensus 216 GhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 287 (395)
|||+||++++.+|.++|++|.++|++++......... ...+... ....+. ......+. . .........
T Consensus 203 G~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~-l~~~~~~~~~~~~~~~~~~-~--~~~~~~~~e 278 (383)
T PLN03084 203 VQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNF-LLGEIFSQDPLRASDKALT-S--CGPYAMKED 278 (383)
T ss_pred EECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHH-HhhhhhhcchHHHHhhhhc-c--cCccCCCHH
Confidence 9999999999999999999999999998753221100 1111000 000000 00000000 0 000000000
Q ss_pred hHHHHHHHhcCCCchH-HHHHHhhhcccCCChhhHhhhhc-cccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEE
Q 016103 288 DKSLLKELLFNQSPAK-DIALASVSMRHIPFAPVLEKLSL-SDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVF 365 (395)
Q Consensus 288 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~ 365 (395)
........+....... ........+.. ......+.+.. .....+++|+++|+|++|.+++.+..+.+++. .+.+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~ 356 (383)
T PLN03084 279 DAMVYRRPYLTSGSSGFALNAISRSMKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLI 356 (383)
T ss_pred HHHHHhccccCCcchHHHHHHHHHHhhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEE
Confidence 1111111111111000 00000011111 11111111110 00123579999999999999999988888887 488999
Q ss_pred EecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 366 RLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 366 ~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+++++||++++|+|+++++.|.+||.+
T Consensus 357 vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 357 ELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred EECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 999999999999999999999999864
No 19
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=6.9e-28 Score=217.24 Aligned_cols=231 Identities=23% Similarity=0.293 Sum_probs=149.9
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChh
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFG 220 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 220 (395)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|... ..++++++++++.+.+ . ++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~-~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----P-DPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----C-CCeEEEEEcHH
Confidence 37999999999999999999999987 599999999999998653 2357777777766543 2 49999999999
Q ss_pred HHHHHHHHHHCCCCcceEEEEcccccCCCcc-h--------hHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHH
Q 016103 221 GACISYAMELFPFKISKAVFIAAAMLTNGQN-L--------LDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSL 291 (395)
Q Consensus 221 g~~a~~~a~~~p~~V~~lVli~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (395)
|.+++.++.++|++|.++|++++........ + ...+.... ..........+........ ....... ..
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~ 152 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQL-SDDYQRTIERFLALQTLGT-PTARQDA-RA 152 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHh-hhhHHHHHHHHHHHHHhcC-CccchHH-HH
Confidence 9999999999999999999998865322110 0 00000000 0000001111110000000 0000000 01
Q ss_pred HHHHhcC-CCc-hHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecC
Q 016103 292 LKELLFN-QSP-AKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKG 369 (395)
Q Consensus 292 ~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~ 369 (395)
+...+.. ... ..........+...+... ....+++|+++|+|++|.++|.+..+.+.+.+++++++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (245)
T TIGR01738 153 LKQTLLARPTPNVQVLQAGLEILATVDLRQ--------PLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAK 224 (245)
T ss_pred HHHHhhccCCCCHHHHHHHHHHhhcccHHH--------HHhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCC
Confidence 1111110 000 011111111111111111 123457999999999999999999999999999999999999
Q ss_pred CCCCCcccChHHHHHHHHHHh
Q 016103 370 ADHSPFFSKPQALHKLLVEIS 390 (395)
Q Consensus 370 ~GH~~~~e~p~~v~~~I~~fl 390 (395)
+||++++|+|+++++.|.+|+
T Consensus 225 ~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 225 AAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCCccccCHHHHHHHHHhhC
Confidence 999999999999999999996
No 20
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=1.8e-27 Score=228.79 Aligned_cols=243 Identities=16% Similarity=0.185 Sum_probs=153.3
Q ss_pred CCeEEEEcCCCCChhhHH--HHHHHH-------HhCCCEEEEEcCCCCCCCCCCCCC------ccChhhhHHHHHHHH-H
Q 016103 141 TNHFVLVHGGGFGAWCWY--KTIALL-------EEGGFKVTAIDLTGAGIHSFDTNG------ITSLSQYVKPLTDFL-E 204 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~--~~~~~L-------~~~G~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~~l~~~l-~ 204 (395)
+|+|||+||++++...|. .+...| ...+|+||++|+||||.|+.+... .++++++++++..++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 789999999999988886 565555 134699999999999999765432 478999999988855 8
Q ss_pred HCCCCCcEE-EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCC-cch-hH-----HhhhcC-----C---chHHHHH
Q 016103 205 KLPDAEKVI-LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNG-QNL-LD-----MFSQQT-----G---STDLMRQ 268 (395)
Q Consensus 205 ~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~-~~~-~~-----~~~~~~-----~---~~~~~~~ 268 (395)
+++++ +++ |+||||||++|+.+|.++|++|+++|++++...... ... .. ...... . .......
T Consensus 149 ~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
T PRK06489 149 GLGVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKR 227 (360)
T ss_pred hcCCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 89996 875 899999999999999999999999999988542111 100 00 000000 0 0000000
Q ss_pred HHHHH-h-hcC----C-CCCCcchhhhHHHHHHHhcCC--CchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEE
Q 016103 269 AQIFL-Y-ANG----N-NKPPTAIDLDKSLLKELLFNQ--SPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYI 339 (395)
Q Consensus 269 ~~~~~-~-~~~----~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI 339 (395)
..... . ... . ..... .......+...+... ................+.... ...+++|+|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------L~~I~~PvLvI 298 (360)
T PRK06489 228 ANPMFAIATSGGTLAYQAQAPT-RAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPD--------LEKIKAPVLAI 298 (360)
T ss_pred HHHHHHHHHhCCHHHHHHhcCC-hHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHH--------HHhCCCCEEEE
Confidence 00000 0 000 0 00000 000011111111000 001111111111111122222 23457999999
Q ss_pred EcCCCCccCHHHH--HHHHhhCCCCeEEEecCC----CCCCcccChHHHHHHHHHHhcCCC
Q 016103 340 ETPEDNAIPIALQ--QSMINSSPPEKVFRLKGA----DHSPFFSKPQALHKLLVEISKLPS 394 (395)
Q Consensus 340 ~G~~D~~vp~~~~--~~l~~~l~~~~~~~i~~~----GH~~~~e~p~~v~~~I~~fl~~~~ 394 (395)
+|++|.++|++.. +.+++.+|++++++++++ ||+++ ++|++|++.|.+||+..+
T Consensus 299 ~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 299 NSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred ecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhcc
Confidence 9999999998865 789999999999999996 99997 899999999999998754
No 21
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=1.2e-27 Score=217.15 Aligned_cols=229 Identities=14% Similarity=0.110 Sum_probs=145.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChh
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFG 220 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 220 (395)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+.. .+++++++++.+++++++.+ +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV--DGFADVSRLLSQTLQSYNIL-PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc--cCHHHHHHHHHHHHHHcCCC-CeEEEEECHH
Confidence 578999999999999999999988 3 59999999999999986543 48999999999999999986 9999999999
Q ss_pred HHHHHHHHHHCCCC-cceEEEEcccccCCCcchh-HHhhhcCCc------hHHHHHHHHHHhhcCCCCCCcchhhhHHHH
Q 016103 221 GACISYAMELFPFK-ISKAVFIAAAMLTNGQNLL-DMFSQQTGS------TDLMRQAQIFLYANGNNKPPTAIDLDKSLL 292 (395)
Q Consensus 221 g~~a~~~a~~~p~~-V~~lVli~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (395)
|.+|+.+|.++|+. |+++|++++.......... ........+ .........++....... ..........
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 154 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFAS--LNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhc--cCccHHHHHH
Confidence 99999999999764 9999999876432211100 000000000 000000000000000000 0000000000
Q ss_pred HHHhcCCCchHHHHHHhhhc---ccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecC
Q 016103 293 KELLFNQSPAKDIALASVSM---RHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKG 369 (395)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~ 369 (395)
. ..... ............ ...+... ....+++|+++|+|++|..+. .+.+. .+++++++++
T Consensus 155 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~ 218 (242)
T PRK11126 155 A-KRSNN-NGAAVAAMLEATSLAKQPDLRP--------ALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPN 218 (242)
T ss_pred H-hcccC-CHHHHHHHHHhcCcccCCcHHH--------HhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCC
Confidence 0 00000 000000000000 0011111 123457999999999998652 23333 3789999999
Q ss_pred CCCCCcccChHHHHHHHHHHhcC
Q 016103 370 ADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 370 ~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+||++++|+|+++++.|.+|+++
T Consensus 219 ~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 219 AGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCchhhhChHHHHHHHHHHHhh
Confidence 99999999999999999999974
No 22
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4.8e-28 Score=231.85 Aligned_cols=244 Identities=15% Similarity=0.128 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCCCCChh-hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC-----CcE
Q 016103 139 LETNHFVLVHGGGFGAW-CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA-----EKV 212 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~-~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-----~~v 212 (395)
...++|||+||++++.. .|..++..|+++||+|+++|+||||.|+.+.....+++++++|+.++++.+... .++
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~ 164 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPS 164 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCE
Confidence 34678999999988865 468899999988999999999999999865444458899999999999876431 279
Q ss_pred EEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhc-CCCC---CCc-chhh
Q 016103 213 ILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYAN-GNNK---PPT-AIDL 287 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~ 287 (395)
+|+||||||++++.++.++|++|.++|++++............. ............... .... ... ....
T Consensus 165 ~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPL-----VLQILILLANLLPKAKLVPQKDLAELAFRDL 239 (349)
T ss_pred EEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchH-----HHHHHHHHHHHCCCceecCCCccccccccCH
Confidence 99999999999999999999999999999986532111000000 000000000000000 0000 000 0000
Q ss_pred hHHHHHHHhc-CCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC--CCCeE
Q 016103 288 DKSLLKELLF-NQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS--PPEKV 364 (395)
Q Consensus 288 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l--~~~~~ 364 (395)
.......... ..............+. ....+ ......+++|+|+|+|++|.++|++..+.+.+.+ ++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~------~~~~~-~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l 312 (349)
T PLN02385 240 KKRKMAEYNVIAYKDKPRLRTAVELLR------TTQEI-EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKL 312 (349)
T ss_pred HHHHHhhcCcceeCCCcchHHHHHHHH------HHHHH-HHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceE
Confidence 0000000000 0000000000000000 00000 1123456899999999999999999999998887 56899
Q ss_pred EEecCCCCCCcccChHH----HHHHHHHHhcCCC
Q 016103 365 FRLKGADHSPFFSKPQA----LHKLLVEISKLPS 394 (395)
Q Consensus 365 ~~i~~~GH~~~~e~p~~----v~~~I~~fl~~~~ 394 (395)
++++++||++++|+|++ +.+.|.+||+.+.
T Consensus 313 ~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 313 KLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 99999999999999987 8888999998653
No 23
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=1.7e-28 Score=218.17 Aligned_cols=221 Identities=21% Similarity=0.308 Sum_probs=150.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.+.. ..++++++++++.+++++++.+ +++|+|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-KVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-SEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-cccccccccccc
Confidence 7999999999999999999996 689999999999999986553 4578999999999999999995 999999999999
Q ss_pred HHHHHHHHCCCCcceEEEEcccccCCCcc---hhHHhhh-cCCch-HHHHHHH-HHHhhcCCCCCCcchhhhHHHHHHHh
Q 016103 223 CISYAMELFPFKISKAVFIAAAMLTNGQN---LLDMFSQ-QTGST-DLMRQAQ-IFLYANGNNKPPTAIDLDKSLLKELL 296 (395)
Q Consensus 223 ~a~~~a~~~p~~V~~lVli~~~~~~~~~~---~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (395)
+++.++.++|++|+++|++++........ ....+.. ..... ....... ..+.. ..........+
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 148 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR----------WFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHTHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccc----------ccccccccccc
Confidence 99999999999999999999986422110 0000000 00000 0000000 00000 00000011111
Q ss_pred cCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcc
Q 016103 297 FNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFF 376 (395)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~ 376 (395)
.. ............ ............+++|+++|+|++|.+++.+..+.+.+.++++++++++++||++++
T Consensus 149 ~~--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 219 (228)
T PF12697_consen 149 RS--SRRALAEYLRSN-------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLFL 219 (228)
T ss_dssp HH--HHHHHHHHHHHH-------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHHH
T ss_pred cc--cccccccccccc-------cccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccHH
Confidence 00 000000000000 000011122234479999999999999999999999999999999999999999999
Q ss_pred cChHHHHHH
Q 016103 377 SKPQALHKL 385 (395)
Q Consensus 377 e~p~~v~~~ 385 (395)
|+|++|+++
T Consensus 220 ~~p~~~~~a 228 (228)
T PF12697_consen 220 EQPDEVAEA 228 (228)
T ss_dssp HSHHHHHHH
T ss_pred HCHHHHhcC
Confidence 999999874
No 24
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.95 E-value=2e-26 Score=213.05 Aligned_cols=248 Identities=16% Similarity=0.180 Sum_probs=152.5
Q ss_pred CCCeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC--ccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 140 ETNHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNG--ITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
.+++|||+||++++. ..|..+...|.+.||+|+++|+||+|.|..+... .++++++++++.+++++++.. +++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLD-KFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 468999999985554 4566666677766899999999999999765433 378999999999999999986 899999
Q ss_pred eChhHHHHHHHHHHCCCCcceEEEEcccccCCCcch-hHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHH
Q 016103 217 HDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNL-LDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKEL 295 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (395)
|||||.+++.+|.++|++|.++|++++......... ......... ............ ....................
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 180 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELP-PEVRAAIKRCEA-SGDYDNPEYQEAVEVFYHHL 180 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcC-hhHHHHHHHHHh-ccCcchHHHHHHHHHHHHHh
Confidence 999999999999999999999999987543211100 000000000 000111100000 00000000000000000000
Q ss_pred hc-CCCchHHHHHHh---------hhcccCCCh--hhHhhhh-ccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCC
Q 016103 296 LF-NQSPAKDIALAS---------VSMRHIPFA--PVLEKLS-LSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPE 362 (395)
Q Consensus 296 ~~-~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~~-~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~ 362 (395)
.. ............ .......+. ..+...+ ......+++|+++++|++|.+ +++..+.+.+.+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~ 259 (288)
T TIGR01250 181 LCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS 259 (288)
T ss_pred hcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC
Confidence 00 000000000000 000000000 0000000 112345689999999999985 667788899999999
Q ss_pred eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 363 KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 363 ~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
++++++++||++++|+|+++++.|.+||+
T Consensus 260 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 260 RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999985
No 25
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=6.4e-28 Score=226.31 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=161.6
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhC-CCEEEEEcCCCCC-CCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEG-GFKVTAIDLTGAG-IHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G-~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
..+++||++|||+++...|+.++..|... |+.|+++|++|+| .|..+....|+..++++.+..+..+.+.. +++|+|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-PVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc-ceEEEE
Confidence 47899999999999999999999999876 5999999999999 55555556699999999999999999885 899999
Q ss_pred eChhHHHHHHHHHHCCCCcceEE---EEcccccCCCcchhHHhhhc---CCchHHHH-----HHHHHHhhc-C--CCCCC
Q 016103 217 HDFGGACISYAMELFPFKISKAV---FIAAAMLTNGQNLLDMFSQQ---TGSTDLMR-----QAQIFLYAN-G--NNKPP 282 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p~~V~~lV---li~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~-~--~~~~~ 282 (395)
||+||.+|+.+|+.+|+.|+++| ++++................ ........ .....+... . .....
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY 214 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeec
Confidence 99999999999999999999999 55554432221111100000 00000000 000000000 0 00000
Q ss_pred cchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccC-CccEEEEEcCCCCccCHHHHHHHHhhCCC
Q 016103 283 TAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYG-SVRRFYIETPEDNAIPIALQQSMINSSPP 361 (395)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~PvliI~G~~D~~vp~~~~~~l~~~l~~ 361 (395)
.............................+...-.. . +.........+ ++|+|+|+|++|+++|.+..+.+.+.+|+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn 292 (326)
T KOG1454|consen 215 TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLG-F-DENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPN 292 (326)
T ss_pred cccccchhhhhhheecccccchhhhheeeEEEeccC-c-cchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCC
Confidence 000000111111110000000000000000000000 0 01111112233 49999999999999999999999999999
Q ss_pred CeEEEecCCCCCCcccChHHHHHHHHHHhcCCC
Q 016103 362 EKVFRLKGADHSPFFSKPQALHKLLVEISKLPS 394 (395)
Q Consensus 362 ~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~~ 394 (395)
+++++++++||.+++|.|+++++.|..|+.+..
T Consensus 293 ~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 293 AELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred ceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999998754
No 26
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=2.2e-26 Score=207.62 Aligned_cols=241 Identities=16% Similarity=0.181 Sum_probs=154.1
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHH-HHHHHHHCCCCCcEEEEEeC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKP-LTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~-l~~~l~~l~~~~~v~lvGhS 218 (395)
+|+|||+||++++...|..+++.|+ .||+|+++|+||+|.|+.+.. ...++++++++ +..+++.++.+ +++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-PFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-eEEEEEec
Confidence 4789999999999999999999998 689999999999999976543 45788999988 78888888875 99999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcchh-HHhhhcCCchHHH-----HHHHHHHhhcC-CCCCC-cchhhhHH
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNLL-DMFSQQTGSTDLM-----RQAQIFLYANG-NNKPP-TAIDLDKS 290 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~-~~~~~~~~ 290 (395)
+||.+++.+|.++|+.|.++|++++.......... ............. ......+.... ..... ........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 99999999999999999999999986432211100 0000000000000 00000000000 00000 00000001
Q ss_pred HHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCC
Q 016103 291 LLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGA 370 (395)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~ 370 (395)
...... ........... ............ .....+++|+++|+|++|..++ +..+.+.+.+++.++++++++
T Consensus 159 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~ 230 (251)
T TIGR03695 159 LRAKRL-ANNPEGLAKML-RATGLGKQPSLW-----PKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANA 230 (251)
T ss_pred HHHhcc-cccchHHHHHH-HHhhhhcccchH-----HHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCC
Confidence 111111 11110000000 000000000001 1123457999999999998774 566778888899999999999
Q ss_pred CCCCcccChHHHHHHHHHHhc
Q 016103 371 DHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 371 GH~~~~e~p~~v~~~I~~fl~ 391 (395)
||++++++|+++++.|.+|++
T Consensus 231 gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 231 GHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCCcCccChHHHHHHHHHHhC
Confidence 999999999999999999984
No 27
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=2.2e-26 Score=213.14 Aligned_cols=238 Identities=13% Similarity=0.136 Sum_probs=152.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCCcEEE
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAEKVIL 214 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~l 214 (395)
...+.|+++||++.+...|..+++.|+++||+|+++|+||||.|+.......++.++++|+.+.++.+ .. .+++|
T Consensus 23 ~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~-~~~~l 101 (276)
T PHA02857 23 YPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPG-VPVFL 101 (276)
T ss_pred CCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCC-CCEEE
Confidence 34467777799999999999999999999999999999999999754333346666777777777653 33 38999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCC--CcchhhhHHHH
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKP--PTAIDLDKSLL 292 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 292 (395)
+||||||++|+.+|.++|++|+++|++++........... .+................ +..........
T Consensus 102 vG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T PHA02857 102 LGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLN---------LLAAKLMGIFYPNKIVGKLCPESVSRDMDEV 172 (276)
T ss_pred EEcCchHHHHHHHHHhCccccceEEEeccccccccccHHH---------HHHHHHHHHhCCCCccCCCCHhhccCCHHHH
Confidence 9999999999999999999999999999865321111000 000011111111000000 00000000000
Q ss_pred HHHhcCCCc---hHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC-CCCeEEEec
Q 016103 293 KELLFNQSP---AKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS-PPEKVFRLK 368 (395)
Q Consensus 293 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l-~~~~~~~i~ 368 (395)
......... .....+...... .... .......+++|+|+|+|++|.++|++..+.+.+.+ ++.++.+++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~ 245 (276)
T PHA02857 173 YKYQYDPLVNHEKIKAGFASQVLK------ATNK-VRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYE 245 (276)
T ss_pred HHHhcCCCccCCCccHHHHHHHHH------HHHH-HHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeC
Confidence 111110000 000000000000 0000 01223456899999999999999999999998877 468999999
Q ss_pred CCCCCCcccCh---HHHHHHHHHHhcCC
Q 016103 369 GADHSPFFSKP---QALHKLLVEISKLP 393 (395)
Q Consensus 369 ~~GH~~~~e~p---~~v~~~I~~fl~~~ 393 (395)
++||.++.|++ +++.+.|.+||+..
T Consensus 246 ~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 246 GAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 99999999977 46889999999864
No 28
>PRK07581 hypothetical protein; Validated
Probab=99.95 E-value=1.2e-26 Score=221.30 Aligned_cols=246 Identities=13% Similarity=0.096 Sum_probs=148.8
Q ss_pred CCCeEEEEcCCCCChhhHHHHH---HHHHhCCCEEEEEcCCCCCCCCCCCC--CccChhh-----hHHHHHH----HHHH
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTI---ALLEEGGFKVTAIDLTGAGIHSFDTN--GITSLSQ-----YVKPLTD----FLEK 205 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~---~~L~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~-----~~~~l~~----~l~~ 205 (395)
..|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+.. ..+++++ +++++.. ++++
T Consensus 40 ~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 119 (339)
T PRK07581 40 KDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEK 119 (339)
T ss_pred CCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHH
Confidence 3466777777777766776554 36765579999999999999976542 2345443 4566655 7788
Q ss_pred CCCCCc-EEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcch--hHH----hhhcCCc---------hHHHHHH
Q 016103 206 LPDAEK-VILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNL--LDM----FSQQTGS---------TDLMRQA 269 (395)
Q Consensus 206 l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~--~~~----~~~~~~~---------~~~~~~~ 269 (395)
++++ + ++||||||||++|+.+|.++|++|++||++++......... ... +.....+ .......
T Consensus 120 lgi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 198 (339)
T PRK07581 120 FGIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAH 198 (339)
T ss_pred hCCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHH
Confidence 9996 8 58999999999999999999999999999987654221100 000 0000000 0000000
Q ss_pred -HHHH--------hhcCCCCCCcc---hhhhHHHHHHHhcCCCchHHHHHHhhhcccCCC-------hhhHhhhhccccc
Q 016103 270 -QIFL--------YANGNNKPPTA---IDLDKSLLKELLFNQSPAKDIALASVSMRHIPF-------APVLEKLSLSDMK 330 (395)
Q Consensus 270 -~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 330 (395)
..+. ........... ...........+...... ........+..... .... ....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~d~~-----~~L~ 272 (339)
T PRK07581 199 ARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPN-NLLAMLWTWQRGDISRNPAYGGDLA-----AALG 272 (339)
T ss_pred HHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcc-cHHHHHHHhhhcccccCcccCCCHH-----HHHh
Confidence 0000 00000000000 000011111111111111 11110000000000 0111 1123
Q ss_pred cCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecC-CCCCCcccChHHHHHHHHHHhcC
Q 016103 331 YGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKG-ADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 331 ~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~-~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
.+++|+|+|+|++|.++|++..+.+.+.+++++++++++ +||++++++|++++..|.+||++
T Consensus 273 ~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 273 SITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred cCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 457999999999999999999999999999999999998 99999999999999999999874
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.95 E-value=1.5e-25 Score=202.95 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=158.8
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC---CccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN---GITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
.....++||+||+|.+...|..-.+.|++ .+.|+++|++|+|+|+.|.- .......+++.|.++-...++. +.+|
T Consensus 87 ~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~-Kmil 164 (365)
T KOG4409|consen 87 SANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE-KMIL 164 (365)
T ss_pred ccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc-ceeE
Confidence 46678999999999999999999999999 59999999999999988653 2344568899999999999996 9999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCc-ch-------hHHh---hh---cCCchHHHHHHHHH-------H
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQ-NL-------LDMF---SQ---QTGSTDLMRQAQIF-------L 273 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~-~~-------~~~~---~~---~~~~~~~~~~~~~~-------~ 273 (395)
+|||+||++|..+|.+||++|+.|||++|....... .. ..++ .. .......++....+ +
T Consensus 165 vGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~ 244 (365)
T KOG4409|consen 165 VGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVSRL 244 (365)
T ss_pred eeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHhhh
Confidence 999999999999999999999999999998754421 00 0000 00 00000011100000 0
Q ss_pred hhcCCCCCCcchhhhHHHHHHHhcCCC----chHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCH
Q 016103 274 YANGNNKPPTAIDLDKSLLKELLFNQS----PAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPI 349 (395)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~ 349 (395)
........+. ....+.+-++++... ..+.............-.++.+++.. -..+||+++|+|++|-+-.
T Consensus 245 ~~d~~~k~~~--~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~---l~~~~pv~fiyG~~dWmD~- 318 (365)
T KOG4409|consen 245 RPDRFRKFPS--LIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRE---LKKDVPVTFIYGDRDWMDK- 318 (365)
T ss_pred hHHHHHhccc--cchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHh---hccCCCEEEEecCcccccc-
Confidence 0000000000 011222222222211 11111111111122233344444321 1225999999999987543
Q ss_pred HHHHHHHhh--CCCCeEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 350 ALQQSMINS--SPPEKVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 350 ~~~~~l~~~--l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
.....+.+. ...+++++++++||++++++|+.|++.+.++++.
T Consensus 319 ~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 319 NAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred hhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 333444442 3357999999999999999999999999999875
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=1.3e-26 Score=221.29 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=149.2
Q ss_pred CCeEEEEcCCCCChh------------hHHHHHH---HHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH
Q 016103 141 TNHFVLVHGGGFGAW------------CWYKTIA---LLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~------------~~~~~~~---~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 205 (395)
++++||+||++++.. .|..++. .|...+|+||++|+||||.|.. ..++++++++++.+++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ll~~ 133 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDTADQADAIALLLDA 133 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 446777777666555 6888886 5743369999999999998742 246889999999999999
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcc--hhHHhhh---cC---C-chHHHHHHHHHHhh-
Q 016103 206 LPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQN--LLDMFSQ---QT---G-STDLMRQAQIFLYA- 275 (395)
Q Consensus 206 l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~--~~~~~~~---~~---~-~~~~~~~~~~~~~~- 275 (395)
+++++.++||||||||++|+.+|.++|++|.++|++++........ ....... .. . ..............
T Consensus 134 l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
T PRK08775 134 LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLS 213 (343)
T ss_pred cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHH
Confidence 9996235799999999999999999999999999999865322110 0000000 00 0 00000000000000
Q ss_pred --------cCCCCCCc-----chhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhc--cccccCCccEEEEE
Q 016103 276 --------NGNNKPPT-----AIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSL--SDMKYGSVRRFYIE 340 (395)
Q Consensus 276 --------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~PvliI~ 340 (395)
........ ........+.... ...........+......+.. .....+++|+|+|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~ 284 (343)
T PRK08775 214 YRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAG---------AQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVA 284 (343)
T ss_pred cCCHHHHHHHhCCCccccCCCccchHHHHHHHHH---------HHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEE
Confidence 00000000 0000000000000 000000000001111111111 11345689999999
Q ss_pred cCCCCccCHHHHHHHHhhC-CCCeEEEecC-CCCCCcccChHHHHHHHHHHhcCC
Q 016103 341 TPEDNAIPIALQQSMINSS-PPEKVFRLKG-ADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 341 G~~D~~vp~~~~~~l~~~l-~~~~~~~i~~-~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
|++|.++|++..+.+.+.+ ++++++++++ +||++++|+|++|++.|.+||++.
T Consensus 285 G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 285 VEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred eCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 9999999999888898887 6999999985 999999999999999999999753
No 31
>PRK10749 lysophospholipase L2; Provisional
Probab=99.94 E-value=3.6e-26 Score=217.13 Aligned_cols=240 Identities=15% Similarity=0.139 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-----CccChhhhHHHHHHHHHHC----CCC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-----GITSLSQYVKPLTDFLEKL----PDA 209 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~l~~~l~~l----~~~ 209 (395)
..+++||++||++.+...|..++..|.+.||+|+++|+||||.|+.+.. ...+++++++++..+++++ +..
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 131 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYR 131 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCC
Confidence 3457999999999999999999999999999999999999999975422 2257899999999999876 554
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhh-----c--C-CCCC
Q 016103 210 EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYA-----N--G-NNKP 281 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~-~~~~ 281 (395)
+++++||||||.+++.++.++|++|+++|++++......... ... .............. . . ....
T Consensus 132 -~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (330)
T PRK10749 132 -KRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLP-SWM-----ARRILNWAEGHPRIRDGYAIGTGRWRPL 204 (330)
T ss_pred -CeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCC-cHH-----HHHHHHHHHHhcCCCCcCCCCCCCCCCC
Confidence 999999999999999999999999999999988643211000 000 00000000000000 0 0 0000
Q ss_pred Cc-------chhhhHHHHHHHhcCCCch----HHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHH
Q 016103 282 PT-------AIDLDKSLLKELLFNQSPA----KDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIA 350 (395)
Q Consensus 282 ~~-------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~ 350 (395)
+. ......... +.+...... ....+....+. .... .......+++|+|+|+|++|.+++++
T Consensus 205 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~i~~P~Lii~G~~D~vv~~~ 276 (330)
T PRK10749 205 PFAINVLTHSRERYRRNL-RFYADDPELRVGGPTYHWVRESIL------AGEQ-VLAGAGDITTPLLLLQAEEERVVDNR 276 (330)
T ss_pred CcCCCCCCCCHHHHHHHH-HHHHhCCCcccCCCcHHHHHHHHH------HHHH-HHhhccCCCCCEEEEEeCCCeeeCHH
Confidence 00 000000111 111000000 00000000000 0000 01223456799999999999999999
Q ss_pred HHHHHHhhC-------CCCeEEEecCCCCCCcccCh---HHHHHHHHHHhcCC
Q 016103 351 LQQSMINSS-------PPEKVFRLKGADHSPFFSKP---QALHKLLVEISKLP 393 (395)
Q Consensus 351 ~~~~l~~~l-------~~~~~~~i~~~GH~~~~e~p---~~v~~~I~~fl~~~ 393 (395)
..+.+++.+ +++++++++++||.++.|.+ +.+.+.|.+||+++
T Consensus 277 ~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 277 MHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 888887765 34589999999999999986 56889999999764
No 32
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=6e-25 Score=213.40 Aligned_cols=245 Identities=16% Similarity=0.239 Sum_probs=147.3
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccCh----hhhHHHHHHHHHHCCCCCcEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSL----SQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~----~~~~~~l~~~l~~l~~~~~v~ 213 (395)
..++|+|||+||++.+...|...+..|.++ |+|+++|+||||.|+.+.....+. +.+++++.++++.+++. +++
T Consensus 102 ~~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~ 179 (402)
T PLN02894 102 KEDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS-NFI 179 (402)
T ss_pred CCCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC-CeE
Confidence 346789999999999999999999999885 999999999999997653221222 23567788888889986 999
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcch-hHHhhhcCC-ch---------------HHHHH--------
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNL-LDMFSQQTG-ST---------------DLMRQ-------- 268 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~-~~~~~~~~~-~~---------------~~~~~-------- 268 (395)
|+||||||++|+.+|.++|++|+++|++++......... ......... .. ...+.
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l 259 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNL 259 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHH
Confidence 999999999999999999999999999998654322111 000000000 00 00000
Q ss_pred HHHHH---hhcCCCCCCcchhhhHHHHHHHhcC----CCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEc
Q 016103 269 AQIFL---YANGNNKPPTAIDLDKSLLKELLFN----QSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIET 341 (395)
Q Consensus 269 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G 341 (395)
...+. +........ ........+.+.++. ....................+.. .....+++|+++|+|
T Consensus 260 ~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~I~vP~liI~G 333 (402)
T PLN02894 260 VRRYTTARFGAHSTGDI-LSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLL-----ESASEWKVPTTFIYG 333 (402)
T ss_pred HHHHHHHHhhhcccccc-cCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHh-----hhcccCCCCEEEEEe
Confidence 00000 000000000 000000111111100 00000000000000000001111 123345799999999
Q ss_pred CCCCccCHHHHHHHHhhC-CCCeEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 342 PEDNAIPIALQQSMINSS-PPEKVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 342 ~~D~~vp~~~~~~l~~~l-~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
++|.+.+ .....+.+.. +.+++++++++||++++|+|++|++.|.+|++
T Consensus 334 ~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~ 383 (402)
T PLN02894 334 RHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACR 383 (402)
T ss_pred CCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHH
Confidence 9998776 4444455544 46899999999999999999999999997765
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=3.4e-26 Score=217.46 Aligned_cols=240 Identities=17% Similarity=0.210 Sum_probs=151.1
Q ss_pred CCCeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC-----CCcEE
Q 016103 140 ETNHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD-----AEKVI 213 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~-----~~~v~ 213 (395)
..++|||+||++.+. +.|..++..|.++||+|+++|+||||.|+.......+++.+++|+..+++.+.. +.+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 356799999998654 457778888999999999999999999975444346788999999999998743 13799
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcch----hh-h
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAI----DL-D 288 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~ 288 (395)
|+||||||++++.++.++|++|+++|++++............ ...........+............. .. .
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW-----PIPQILTFVARFLPTLAIVPTADLLEKSVKVPA 212 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch-----HHHHHHHHHHHHCCCCccccCCCcccccccCHH
Confidence 999999999999999999999999999998653211000000 0000111111110000000000000 00 0
Q ss_pred HHHHHHH---hcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--CCe
Q 016103 289 KSLLKEL---LFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP--PEK 363 (395)
Q Consensus 289 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~--~~~ 363 (395)
...+... .+..... .......+. .... .......+++|+|+|+|++|.++|++..+.+++.++ +.+
T Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~-~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~ 283 (330)
T PLN02298 213 KKIIAKRNPMRYNGKPR--LGTVVELLR------VTDY-LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKT 283 (330)
T ss_pred HHHHHHhCccccCCCcc--HHHHHHHHH------HHHH-HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCce
Confidence 0000000 0000000 000000000 0000 011234557999999999999999999999988764 789
Q ss_pred EEEecCCCCCCcccChH----HHHHHHHHHhcCC
Q 016103 364 VFRLKGADHSPFFSKPQ----ALHKLLVEISKLP 393 (395)
Q Consensus 364 ~~~i~~~GH~~~~e~p~----~v~~~I~~fl~~~ 393 (395)
+++++++||.+++++|+ .+.+.|.+||.+.
T Consensus 284 l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 284 IKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999886 4677888888753
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.8e-25 Score=216.03 Aligned_cols=244 Identities=13% Similarity=0.173 Sum_probs=152.8
Q ss_pred CCeEEEEcCCCCChhh-------------HHHHHH---HHHhCCCEEEEEcCCCC-CCCCCCCC-------------Ccc
Q 016103 141 TNHFVLVHGGGFGAWC-------------WYKTIA---LLEEGGFKVTAIDLTGA-GIHSFDTN-------------GIT 190 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~-------------~~~~~~---~L~~~G~~v~~~d~~G~-G~s~~~~~-------------~~~ 190 (395)
+|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+.+.. ..+
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 6899999999999985 666652 34344699999999983 54432210 147
Q ss_pred ChhhhHHHHHHHHHHCCCCCc-EEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcc--hh----HHhhhcCC--
Q 016103 191 SLSQYVKPLTDFLEKLPDAEK-VILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQN--LL----DMFSQQTG-- 261 (395)
Q Consensus 191 ~~~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~--~~----~~~~~~~~-- 261 (395)
+++++++++.+++++++++ + ++|+||||||++++.+|.++|++|+++|++++........ +. ........
T Consensus 128 ~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 206 (379)
T PRK00175 128 TIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDWH 206 (379)
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCC
Confidence 8999999999999999997 7 5999999999999999999999999999999876432211 11 00000000
Q ss_pred --------ch---HH--HHHHHH--------H--HhhcCCCCCCc----ch-hhhHHHHH---HHhcCCCchHHHHHHhh
Q 016103 262 --------ST---DL--MRQAQI--------F--LYANGNNKPPT----AI-DLDKSLLK---ELLFNQSPAKDIALASV 310 (395)
Q Consensus 262 --------~~---~~--~~~~~~--------~--~~~~~~~~~~~----~~-~~~~~~~~---~~~~~~~~~~~~~~~~~ 310 (395)
.. .. .+.... + .+......... .. .....++. ..+..............
T Consensus 207 ~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~ 286 (379)
T PRK00175 207 GGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTR 286 (379)
T ss_pred CCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHH
Confidence 00 00 000000 0 00000000000 00 00000000 00111111111111111
Q ss_pred hcccCC--------ChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCC----eEEEec-CCCCCCccc
Q 016103 311 SMRHIP--------FAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPE----KVFRLK-GADHSPFFS 377 (395)
Q Consensus 311 ~~~~~~--------~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~----~~~~i~-~~GH~~~~e 377 (395)
.+...+ +... ...+++|+|+|+|++|.++|++..+.+++.++++ ++++++ ++||++++|
T Consensus 287 ~~~~~d~~~~~~~d~~~~--------l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le 358 (379)
T PRK00175 287 ALDYFDPARGRGGDLAAA--------LARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLL 358 (379)
T ss_pred HHHhccccCCCCCCHHHH--------HhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhc
Confidence 111111 1222 2345799999999999999999999999999887 677775 899999999
Q ss_pred ChHHHHHHHHHHhcCC
Q 016103 378 KPQALHKLLVEISKLP 393 (395)
Q Consensus 378 ~p~~v~~~I~~fl~~~ 393 (395)
+|++|++.|.+||++.
T Consensus 359 ~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 359 DDPRYGRLVRAFLERA 374 (379)
T ss_pred CHHHHHHHHHHHHHhh
Confidence 9999999999999864
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.94 E-value=8.9e-26 Score=216.28 Aligned_cols=249 Identities=12% Similarity=0.119 Sum_probs=151.9
Q ss_pred CCCeEEEEcCCCCChh-----------hHHHHH---HHHHhCCCEEEEEcCCC--CCCCCCC----C-------CCccCh
Q 016103 140 ETNHFVLVHGGGFGAW-----------CWYKTI---ALLEEGGFKVTAIDLTG--AGIHSFD----T-------NGITSL 192 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~-----------~~~~~~---~~L~~~G~~v~~~d~~G--~G~s~~~----~-------~~~~~~ 192 (395)
.+++|||+||++++.. .|..++ ..|...+|+|+++|+|| +|.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 4579999999998763 377775 25655679999999999 5554321 1 124789
Q ss_pred hhhHHHHHHHHHHCCCCCc-EEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcc--hhH----HhhhcCC----
Q 016103 193 SQYVKPLTDFLEKLPDAEK-VILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQN--LLD----MFSQQTG---- 261 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~~~~~-v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~--~~~----~~~~~~~---- 261 (395)
+++++++..++++++++ + ++|+||||||++++.+|.++|++|+++|++++........ +.. .......
T Consensus 110 ~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDG 188 (351)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999996 7 9999999999999999999999999999999876433211 110 0000000
Q ss_pred -c-----h-HHH---HHHHHHH----------hhcCCCCC--Cc-------chhhhH-HHHHHHhcCCCchHHHHHHhhh
Q 016103 262 -S-----T-DLM---RQAQIFL----------YANGNNKP--PT-------AIDLDK-SLLKELLFNQSPAKDIALASVS 311 (395)
Q Consensus 262 -~-----~-~~~---~~~~~~~----------~~~~~~~~--~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 311 (395)
. . ... ....... +....... +. ...... ......+... ...........
T Consensus 189 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~ 267 (351)
T TIGR01392 189 DYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRF-DANSYLYLTRA 267 (351)
T ss_pred CCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhc-CcchHHHHHHH
Confidence 0 0 000 0000000 00000000 00 000000 0000111110 01111111111
Q ss_pred cccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEE-----EecCCCCCCcccChHHHHHHH
Q 016103 312 MRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVF-----RLKGADHSPFFSKPQALHKLL 386 (395)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~-----~i~~~GH~~~~e~p~~v~~~I 386 (395)
+...+....... .......+++|+|+|+|++|.++|++..+.+++.++++++. +++++||++++++|++|++.|
T Consensus 268 l~~~d~~~~~~~-~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 268 LDTHDLGRGRGS-LTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred HHhcCCcCCCCC-HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 111111000000 00123345799999999999999999999999999988765 567899999999999999999
Q ss_pred HHHhc
Q 016103 387 VEISK 391 (395)
Q Consensus 387 ~~fl~ 391 (395)
.+||+
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99985
No 36
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=5.1e-25 Score=212.61 Aligned_cols=237 Identities=24% Similarity=0.307 Sum_probs=156.3
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
.+++++|||+||++++...|..++..|... |+|+++|+||||.|.... ...+++++++++..+++.++.. +++|+||
T Consensus 128 ~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~lvG~ 204 (371)
T PRK14875 128 EGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDALGIE-RAHLVGH 204 (371)
T ss_pred CCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCc-cEEEEee
Confidence 345789999999999999999999999885 999999999999996433 3478999999999999999986 9999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCC--cchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHH
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNG--QNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKEL 295 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (395)
|+||++++.+|..+|++|.++|++++...... ..+...+........+....... ..... ..........
T Consensus 205 S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~~ 276 (371)
T PRK14875 205 SMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELL-FADPA-------LVTRQMVEDL 276 (371)
T ss_pred chHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHH-hcChh-------hCCHHHHHHH
Confidence 99999999999999999999999987643221 11111111111111111111111 10000 0111111111
Q ss_pred hcC---CCchHHHH-HHhhhcccC-CChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCC
Q 016103 296 LFN---QSPAKDIA-LASVSMRHI-PFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGA 370 (395)
Q Consensus 296 ~~~---~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~ 370 (395)
+.. ........ .....+... ....... ....+++|+|+|+|++|.++|.+..+.+. ++.++.+++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~i~~Pvlii~g~~D~~vp~~~~~~l~---~~~~~~~~~~~ 348 (371)
T PRK14875 277 LKYKRLDGVDDALRALADALFAGGRQRVDLRD-----RLASLAIPVLVIWGEQDRIIPAAHAQGLP---DGVAVHVLPGA 348 (371)
T ss_pred HHHhccccHHHHHHHHHHHhccCcccchhHHH-----HHhcCCCCEEEEEECCCCccCHHHHhhcc---CCCeEEEeCCC
Confidence 110 00000000 000001100 0011111 12245799999999999999987765543 46799999999
Q ss_pred CCCCcccChHHHHHHHHHHhcCC
Q 016103 371 DHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 371 GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
||++++++|+++++.|.+||+++
T Consensus 349 gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 349 GHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCChhhhCHHHHHHHHHHHhccC
Confidence 99999999999999999999763
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1e-24 Score=210.29 Aligned_cols=237 Identities=16% Similarity=0.166 Sum_probs=152.6
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC---CCcEEEEE
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD---AEKVILVG 216 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~lvG 216 (395)
..++|||+||++++...|..++..|+++||+|+++|+||||.|+.......+++.+++|+..+++.+.. ..+++|+|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 456899999999999999999999999999999999999999986544446788889999999888742 13799999
Q ss_pred eChhHHHHHHHHHHCCC---CcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcC-CCC-CCc--chhhhH
Q 016103 217 HDFGGACISYAMELFPF---KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANG-NNK-PPT--AIDLDK 289 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p~---~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~ 289 (395)
|||||.+++.++. +|+ +|+++|+.++........... .........+.... ... ... ......
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~---------~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~ 284 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIV---------GAVAPIFSLVAPRFQFKGANKRGIPVSRDP 284 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHH---------HHHHHHHHHhCCCCcccCcccccCCcCCCH
Confidence 9999999998765 664 799999998864322110000 00000000010000 000 000 000001
Q ss_pred HHHHHHhcCCCc---hHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--CCeE
Q 016103 290 SLLKELLFNQSP---AKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP--PEKV 364 (395)
Q Consensus 290 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~--~~~~ 364 (395)
......+..... ......... ....... .......+++|+|+|+|++|.++|++..+.+++.++ +.++
T Consensus 285 ~~~~~~~~dp~~~~g~i~~~~~~~------~~~~~~~-l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l 357 (395)
T PLN02652 285 AALLAKYSDPLVYTGPIRVRTGHE------ILRISSY-LTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDI 357 (395)
T ss_pred HHHHHHhcCCCcccCCchHHHHHH------HHHHHHH-HHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceE
Confidence 111111100000 000000000 0000000 012234567999999999999999999999988765 4689
Q ss_pred EEecCCCCCCccc-ChHHHHHHHHHHhcCC
Q 016103 365 FRLKGADHSPFFS-KPQALHKLLVEISKLP 393 (395)
Q Consensus 365 ~~i~~~GH~~~~e-~p~~v~~~I~~fl~~~ 393 (395)
+++++++|.+++| +++++.+.|.+||..+
T Consensus 358 ~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~ 387 (395)
T PLN02652 358 KLYDGFLHDLLFEPEREEVGRDIIDWMEKR 387 (395)
T ss_pred EEECCCeEEeccCCCHHHHHHHHHHHHHHH
Confidence 9999999998877 7899999999999753
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.92 E-value=4.5e-24 Score=236.84 Aligned_cols=241 Identities=17% Similarity=0.194 Sum_probs=156.0
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCccChhhhHHHHHHHHHHCCCCCcE
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT-------NGITSLSQYVKPLTDFLEKLPDAEKV 212 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~l~~~l~~l~~~~~v 212 (395)
.+++|||+||++++...|..++..|.+. |+|+++|+||||.|.... ...++++++++++..++++++.+ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-KV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-CE
Confidence 4689999999999999999999999875 999999999999997532 13468999999999999999986 99
Q ss_pred EEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcC--CchHHH-H-HHHHHH---hhcCCCCCCcch
Q 016103 213 ILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQT--GSTDLM-R-QAQIFL---YANGNNKPPTAI 285 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~--~~~~~~-~-~~~~~~---~~~~~~~~~~~~ 285 (395)
+|+||||||.+++.++.++|++|+++|++++.+....... ..+.... ...... . ....+. +...........
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1526 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNH 1526 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccC
Confidence 9999999999999999999999999999987543221111 1110000 000000 0 000000 000000000000
Q ss_pred hhhHHHHHHHhcCCCchHHHHHHhhhc---ccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC-
Q 016103 286 DLDKSLLKELLFNQSPAKDIALASVSM---RHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP- 361 (395)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~- 361 (395)
......+...+..... .........+ ...++... ...+++|+|+|+|++|.+++ +..+.+.+.+++
T Consensus 1527 ~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~dl~~~--------L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1527 PHFNKIVASRLLHKDV-PSLAKLLSDLSIGRQPSLWED--------LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HHHHHHHHHHHhcCCH-HHHHHHHHHhhhcccchHHHH--------HhhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0000111111111111 1111110001 11111222 23457999999999999875 566677777765
Q ss_pred -----------CeEEEecCCCCCCcccChHHHHHHHHHHhcCC
Q 016103 362 -----------EKVFRLKGADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 362 -----------~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
+++++++++||++++|+|+++++.|.+||++.
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 48999999999999999999999999999864
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.92 E-value=2.2e-23 Score=196.08 Aligned_cols=106 Identities=15% Similarity=0.180 Sum_probs=88.4
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
.++++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.. ..++.+++++++..++++++++ +++++||
T Consensus 25 ~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~-~~~lvG~ 102 (306)
T TIGR01249 25 PDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIK-NWLVFGG 102 (306)
T ss_pred CCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 3467899999987766544 34445555679999999999999985432 2467889999999999999986 9999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
||||.+++.++.++|++|+++|++++...
T Consensus 103 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 103 SWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 99999999999999999999999988654
No 40
>PLN02511 hydrolase
Probab=99.91 E-value=4.8e-24 Score=206.26 Aligned_cols=245 Identities=12% Similarity=0.102 Sum_probs=144.8
Q ss_pred CCCCeEEEEcCCCCChhh-H-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC---CCcEE
Q 016103 139 LETNHFVLVHGGGFGAWC-W-YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD---AEKVI 213 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~-~-~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~---~~~v~ 213 (395)
..+|+||++||++++... | ..++..+.++||+|+++|+||||.|...... .....+++|+.++++++.. +.+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 457899999999766543 4 5677777788999999999999999754332 2335667788888877644 13899
Q ss_pred EEEeChhHHHHHHHHHHCCCC--cceEEEEcccccCCCcchhHHhhhcC--Cch-HHHHHHHHHHhhc--CCCCCCcchh
Q 016103 214 LVGHDFGGACISYAMELFPFK--ISKAVFIAAAMLTNGQNLLDMFSQQT--GST-DLMRQAQIFLYAN--GNNKPPTAID 286 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~--V~~lVli~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~--~~~~~~~~~~ 286 (395)
++||||||.+++.++.++|++ |.++++++++..... ....+.... ... .+...+....... .....+..
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~--~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~-- 252 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVI--ADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGE-- 252 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc--
Confidence 999999999999999999987 889988877542100 000000000 000 0111111111000 00000000
Q ss_pred hhHHHHHHHhcCCCchHHHHH-HhhhcccC-CChhhHhh-hhccccccCCccEEEEEcCCCCccCHHHH-HHHHhhCCCC
Q 016103 287 LDKSLLKELLFNQSPAKDIAL-ASVSMRHI-PFAPVLEK-LSLSDMKYGSVRRFYIETPEDNAIPIALQ-QSMINSSPPE 362 (395)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~~~PvliI~G~~D~~vp~~~~-~~l~~~l~~~ 362 (395)
+....+.. .....+... ........ .....+.. .....+..+++|+|+|+|++|+++|.+.. ..+.+.++++
T Consensus 253 ~~~~~~~~----~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~ 328 (388)
T PLN02511 253 YNIPLVAN----AKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNC 328 (388)
T ss_pred cCHHHHHh----CCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCE
Confidence 00000000 000000000 00000000 00000110 01122445689999999999999997754 4567788999
Q ss_pred eEEEecCCCCCCcccChHH------HHHHHHHHhcC
Q 016103 363 KVFRLKGADHSPFFSKPQA------LHKLLVEISKL 392 (395)
Q Consensus 363 ~~~~i~~~GH~~~~e~p~~------v~~~I~~fl~~ 392 (395)
++++++++||+.++|+|+. +.+.|.+||+.
T Consensus 329 ~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 329 LLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEA 364 (388)
T ss_pred EEEECCCcceeccccCCCCCCCCccHHHHHHHHHHH
Confidence 9999999999999999976 48888898863
No 41
>PRK05855 short chain dehydrogenase; Validated
Probab=99.91 E-value=1.2e-23 Score=214.95 Aligned_cols=253 Identities=21% Similarity=0.154 Sum_probs=150.9
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
+.++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|+.+.. ..++++++++|+..++++++...+++|+|
T Consensus 22 ~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvG 100 (582)
T PRK05855 22 DPDRPTVVLVHGYPDNHEVWDGVAPLLAD-RFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLA 100 (582)
T ss_pred CCCCCeEEEEcCCCchHHHHHHHHHHhhc-ceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 34578999999999999999999999954 79999999999999976432 45789999999999999998764599999
Q ss_pred eChhHHHHHHHHHH--CCCCcceEEEEcccccCCCcchhHHhhh---cCCchHHHHHHHHHHhh---cCCCCCCcch-hh
Q 016103 217 HDFGGACISYAMEL--FPFKISKAVFIAAAMLTNGQNLLDMFSQ---QTGSTDLMRQAQIFLYA---NGNNKPPTAI-DL 287 (395)
Q Consensus 217 hS~Gg~~a~~~a~~--~p~~V~~lVli~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~ 287 (395)
|||||.+++.++.+ +++++..++.++++.......+...... ...............+. .......... ..
T Consensus 101 hS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (582)
T PRK05855 101 HDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLG 180 (582)
T ss_pred cChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccc
Confidence 99999999888775 3445666665554321100000000000 00000000000000000 0000000000 00
Q ss_pred hHHHHHHHhc--CCCchHHHHHHhh-hcccCCChhh----HhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC
Q 016103 288 DKSLLKELLF--NQSPAKDIALASV-SMRHIPFAPV----LEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP 360 (395)
Q Consensus 288 ~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~ 360 (395)
....+...+. ............. .......... ..........++++|+++|+|++|.++|....+.+.+.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~ 260 (582)
T PRK05855 181 LGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVP 260 (582)
T ss_pred hhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCC
Confidence 0000001000 0000000000000 0000000000 0000011123468999999999999999999999998888
Q ss_pred CCeEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 361 PEKVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 361 ~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+.++++++ +||++++|+|+++++.|.+|+..
T Consensus 261 ~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 261 RLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred cceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 88888887 69999999999999999999975
No 42
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=4.4e-23 Score=191.73 Aligned_cols=245 Identities=18% Similarity=0.197 Sum_probs=156.7
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCC-CCCCCccChhhhHHHHHHHHHHCC---CCCcEEEEEe
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHS-FDTNGITSLSQYVKPLTDFLEKLP---DAEKVILVGH 217 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~l~~~l~~l~---~~~~v~lvGh 217 (395)
.+||++||++.+...|..++..|..+||.|+++|+||||.|. .......++.++.+|+..+++... .+.+++|+||
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gH 114 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGH 114 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEe
Confidence 799999999999999999999999999999999999999997 455555678999999999998874 3469999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhc--CCCCCCcchhhhHHHHHHH
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYAN--GNNKPPTAIDLDKSLLKEL 295 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 295 (395)
||||.+++.++.+++.+|.++||.+|............+... ......+....+.... ..........-+......+
T Consensus 115 SmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~ 193 (298)
T COG2267 115 SMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARL-ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAY 193 (298)
T ss_pred CcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHH-hcccccccccccccCcccccCcCcchhhcCHHHHHHH
Confidence 999999999999999999999999998754430000000000 0000000000000000 0000000000111111111
Q ss_pred hcCCC---chHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccC-HHHHHHHHhhC--CCCeEEEecC
Q 016103 296 LFNQS---PAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIP-IALQQSMINSS--PPEKVFRLKG 369 (395)
Q Consensus 296 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp-~~~~~~l~~~l--~~~~~~~i~~ 369 (395)
..... ......+....+.... .........+++|+|+++|++|.+++ .+...++.+.. ++.++.+++|
T Consensus 194 ~~dP~~~~~~~~~~w~~~~~~a~~------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g 267 (298)
T COG2267 194 EADPLIGVGGPVSRWVDLALLAGR------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPG 267 (298)
T ss_pred hcCCccccCCccHHHHHHHHHhhc------ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCC
Confidence 11000 0000011100000000 01111234457999999999999999 67777766654 5678999999
Q ss_pred CCCCCcccCh---HHHHHHHHHHhcCC
Q 016103 370 ADHSPFFSKP---QALHKLLVEISKLP 393 (395)
Q Consensus 370 ~GH~~~~e~p---~~v~~~I~~fl~~~ 393 (395)
+-|.++.|.+ +++.+.+.+|+...
T Consensus 268 ~~He~~~E~~~~r~~~~~~~~~~l~~~ 294 (298)
T COG2267 268 AYHELLNEPDRAREEVLKDILAWLAEA 294 (298)
T ss_pred cchhhhcCcchHHHHHHHHHHHHHHhh
Confidence 9999988854 67899999998764
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.89 E-value=1.1e-22 Score=181.01 Aligned_cols=238 Identities=16% Similarity=0.177 Sum_probs=157.6
Q ss_pred CCCCeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-----CCCCcE
Q 016103 139 LETNHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-----PDAEKV 212 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-----~~~~~v 212 (395)
...-.|+++||++... +.|..++..|+..||.|+++|++|||.|++-.....+++..++|+..+++.. ..+-+.
T Consensus 52 ~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~ 131 (313)
T KOG1455|consen 52 EPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPR 131 (313)
T ss_pred CCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCe
Confidence 3345899999998776 7889999999999999999999999999987777789999999999999863 222489
Q ss_pred EEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcc----hhhh
Q 016103 213 ILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTA----IDLD 288 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 288 (395)
.|+||||||++++.++.+.|+...++|+++|...-......... ...+...+..++ .... ..+.. ..+.
T Consensus 132 FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~-----v~~~l~~l~~li-P~wk-~vp~~d~~~~~~k 204 (313)
T KOG1455|consen 132 FLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPP-----VISILTLLSKLI-PTWK-IVPTKDIIDVAFK 204 (313)
T ss_pred eeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcH-----HHHHHHHHHHhC-Ccee-ecCCccccccccC
Confidence 99999999999999999999999999999998754322100000 000111111110 0000 00000 0011
Q ss_pred HHHHHHHhc------CCCchHHHHHHhhhcc-cCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC-
Q 016103 289 KSLLKELLF------NQSPAKDIALASVSMR-HIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP- 360 (395)
Q Consensus 289 ~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~- 360 (395)
....+.... ...+... .....++ ..++. ..+..+++|.+++||+.|.++.+..++.+++..+
T Consensus 205 dp~~r~~~~~npl~y~g~pRl~--T~~ElLr~~~~le--------~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S 274 (313)
T KOG1455|consen 205 DPEKRKILRSDPLCYTGKPRLK--TAYELLRVTADLE--------KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASS 274 (313)
T ss_pred CHHHHHHhhcCCceecCCccHH--HHHHHHHHHHHHH--------HhcccccccEEEEecCCCcccCcHHHHHHHHhccC
Confidence 111111111 1111110 0000000 01111 1234567999999999999999999999998775
Q ss_pred -CCeEEEecCCCCCCcc-c---ChHHHHHHHHHHhcCC
Q 016103 361 -PEKVFRLKGADHSPFF-S---KPQALHKLLVEISKLP 393 (395)
Q Consensus 361 -~~~~~~i~~~GH~~~~-e---~p~~v~~~I~~fl~~~ 393 (395)
+.++.++||.-|.++. | +-+.|...|.+||+..
T Consensus 275 ~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 275 SDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 5689999999998886 3 2356788889998764
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.89 E-value=3.2e-22 Score=169.78 Aligned_cols=221 Identities=14% Similarity=0.124 Sum_probs=147.9
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH---CCCCCcEEEEEe
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK---LPDAEKVILVGH 217 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~lvGh 217 (395)
+..|+||||+.++....+.+.+.|.++||.|.+|.+||||...... -..+.++|.+++.+..++ .+.+ .|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~-eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYD-EIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCC-eEEEEee
Confidence 3899999999999999999999999999999999999999764221 125677777666655554 4665 9999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhc
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLF 297 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (395)
||||.+++.+|.++| ++++|.+|++........ ....+......+-.. . ........+.+.
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~--------iie~~l~y~~~~kk~-----e----~k~~e~~~~e~~ 153 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRI--------IIEGLLEYFRNAKKY-----E----GKDQEQIDKEMK 153 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccchh--------hhHHHHHHHHHhhhc-----c----CCCHHHHHHHHH
Confidence 999999999999999 999999999864322110 011111111111000 0 001111111111
Q ss_pred CCC--chHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--CCeEEEecCCCCC
Q 016103 298 NQS--PAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP--PEKVFRLKGADHS 373 (395)
Q Consensus 298 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~--~~~~~~i~~~GH~ 373 (395)
... ........ ..+... .......+..|+++++|.+|+++|.+.+..+.+.+- ..++.+++++||.
T Consensus 154 ~~~~~~~~~~~~~---------~~~i~~-~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 154 SYKDTPMTTTAQL---------KKLIKD-ARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred HhhcchHHHHHHH---------HHHHHH-HHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 100 00000000 000000 112233456999999999999999999999988764 4589999999999
Q ss_pred CcccC-hHHHHHHHHHHhcC
Q 016103 374 PFFSK-PQALHKLLVEISKL 392 (395)
Q Consensus 374 ~~~e~-p~~v~~~I~~fl~~ 392 (395)
+..+. -+.+.+.+..||+.
T Consensus 224 It~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 224 ITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred eecchhHHHHHHHHHHHhhC
Confidence 88765 57899999999963
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.89 E-value=2.1e-21 Score=175.77 Aligned_cols=237 Identities=17% Similarity=0.170 Sum_probs=160.3
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCC----CCCcE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLP----DAEKV 212 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~----~~~~v 212 (395)
....|++|++||+.++...|..+...|+.. |-.|+++|.|.||.|.... ..+..++++|+..+++..+ . .++
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~--~h~~~~ma~dv~~Fi~~v~~~~~~-~~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT--VHNYEAMAEDVKLFIDGVGGSTRL-DPV 125 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc--ccCHHHHHHHHHHHHHHccccccc-CCc
Confidence 346799999999999999999999999875 6789999999999997643 4679999999999999984 4 499
Q ss_pred EEEEeChhH-HHHHHHHHHCCCCcceEEEEcccccCCCcc------hhHHhhhcCCc-------hHHHHHHHHHHhhcCC
Q 016103 213 ILVGHDFGG-ACISYAMELFPFKISKAVFIAAAMLTNGQN------LLDMFSQQTGS-------TDLMRQAQIFLYANGN 278 (395)
Q Consensus 213 ~lvGhS~Gg-~~a~~~a~~~p~~V~~lVli~~~~~~~~~~------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 278 (395)
+|+|||||| .+++..+..+|+.+..+|+++..+...+.. .+..+...... ....+.+.....
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~---- 201 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGF---- 201 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhc----
Confidence 999999999 788888889999999999999876322211 11111111111 111111111000
Q ss_pred CCCCcchhhhHHHHHHHhcCCC---------chHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCH
Q 016103 279 NKPPTAIDLDKSLLKELLFNQS---------PAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPI 349 (395)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~ 349 (395)
......++...+.... ...........+....+...+ .. ..-..||++|.|.++..++.
T Consensus 202 ------d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l-----~~-~~~~~pvlfi~g~~S~fv~~ 269 (315)
T KOG2382|consen 202 ------DNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADL-----ED-GPYTGPVLFIKGLQSKFVPD 269 (315)
T ss_pred ------chHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccc-----cc-cccccceeEEecCCCCCcCh
Confidence 0000011111111000 000000000000000111111 11 22358999999999999999
Q ss_pred HHHHHHHhhCCCCeEEEecCCCCCCcccChHHHHHHHHHHhcCC
Q 016103 350 ALQQSMINSSPPEKVFRLKGADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 350 ~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
+.-..+.+.+|++++.+++++|||+++|+|++|.+.|.+|+..+
T Consensus 270 ~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 270 EHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred hHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999875
No 46
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.88 E-value=1.5e-21 Score=187.65 Aligned_cols=252 Identities=10% Similarity=0.078 Sum_probs=153.9
Q ss_pred CCCCeEEEEcCCCCChhh-------------HHHHHH---HHHhCCCEEEEEcCCCCCCCCCC-----------C-----
Q 016103 139 LETNHFVLVHGGGFGAWC-------------WYKTIA---LLEEGGFKVTAIDLTGAGIHSFD-----------T----- 186 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~-------------~~~~~~---~L~~~G~~v~~~d~~G~G~s~~~-----------~----- 186 (395)
...++||++|++.++... |..++- .|.-.-|.||++|..|.|.|+.| +
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 446899999999775421 555543 34333499999999998763221 1
Q ss_pred ----CCccChhhhHHHHHHHHHHCCCCCcEE-EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcc---hhHHhh-
Q 016103 187 ----NGITSLSQYVKPLTDFLEKLPDAEKVI-LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQN---LLDMFS- 257 (395)
Q Consensus 187 ----~~~~~~~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~---~~~~~~- 257 (395)
...++++++++++..++++++++ ++. +|||||||++|+++|.++|++|.++|++++........ +.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ 212 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAE 212 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHH
Confidence 12378999999999999999996 886 99999999999999999999999999999876543321 111110
Q ss_pred ---hcCC-----------chHHHHHHHH---HHh------hcCCCCC-Ccc--------hhhh-HHHHHHH---hcCCCc
Q 016103 258 ---QQTG-----------STDLMRQAQI---FLY------ANGNNKP-PTA--------IDLD-KSLLKEL---LFNQSP 301 (395)
Q Consensus 258 ---~~~~-----------~~~~~~~~~~---~~~------~~~~~~~-~~~--------~~~~-~~~~~~~---~~~~~~ 301 (395)
.... ...-+..... ..+ ...+... ... ..+. ..++... +.....
T Consensus 213 ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 213 AIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred HHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 1100 0000011100 000 0000000 000 0000 0111111 111111
Q ss_pred hHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC----CCeEEEecC-CCCCCcc
Q 016103 302 AKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP----PEKVFRLKG-ADHSPFF 376 (395)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~----~~~~~~i~~-~GH~~~~ 376 (395)
...+......+...+...... .....+..+++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||++++
T Consensus 293 an~~l~l~~a~~~~d~g~~~~-dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l 371 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFS-SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV 371 (389)
T ss_pred hhhHHHHHHHHHhcCCccccC-CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh
Confidence 122222222222221110000 0011233457999999999999999999999998886 689999985 8999999
Q ss_pred cChHHHHHHHHHHhcC
Q 016103 377 SKPQALHKLLVEISKL 392 (395)
Q Consensus 377 e~p~~v~~~I~~fl~~ 392 (395)
++|+++++.|.+||++
T Consensus 372 e~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 372 FDIHLFEKKIYEFLNR 387 (389)
T ss_pred cCHHHHHHHHHHHHcc
Confidence 9999999999999976
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.88 E-value=1.7e-21 Score=184.86 Aligned_cols=243 Identities=15% Similarity=0.194 Sum_probs=145.1
Q ss_pred CCCeEEEEcCCCCChh-hH-------------------------HHHHHHHHhCCCEEEEEcCCCCCCCCCCC---CCcc
Q 016103 140 ETNHFVLVHGGGFGAW-CW-------------------------YKTIALLEEGGFKVTAIDLTGAGIHSFDT---NGIT 190 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~-~~-------------------------~~~~~~L~~~G~~v~~~d~~G~G~s~~~~---~~~~ 190 (395)
.+.+||++||++.+.. .+ ..+++.|.++||.|+++|+||||.|.... ....
T Consensus 20 ~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~ 99 (332)
T TIGR01607 20 AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHIN 99 (332)
T ss_pred CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchh
Confidence 4569999999988885 21 36799999999999999999999987542 2224
Q ss_pred ChhhhHHHHHHHHHHCC----------------------C-CCcEEEEEeChhHHHHHHHHHHCCC--------CcceEE
Q 016103 191 SLSQYVKPLTDFLEKLP----------------------D-AEKVILVGHDFGGACISYAMELFPF--------KISKAV 239 (395)
Q Consensus 191 ~~~~~~~~l~~~l~~l~----------------------~-~~~v~lvGhS~Gg~~a~~~a~~~p~--------~V~~lV 239 (395)
+++++++|+..+++... . +.+++|+||||||.+++.++..+++ .++++|
T Consensus 100 ~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i 179 (332)
T TIGR01607 100 CFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCI 179 (332)
T ss_pred hHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEE
Confidence 78999999999987642 1 2489999999999999999876643 589999
Q ss_pred EEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCC----chHHHHHHhhhcccC
Q 016103 240 FIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQS----PAKDIALASVSMRHI 315 (395)
Q Consensus 240 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 315 (395)
+++++....................+...+..+ ................. ..+...... ......+....+
T Consensus 180 ~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-~p~~~~~~~~~~~~~~~-~~~~~~~Dp~~~~~~~s~~~~~~l~--- 254 (332)
T TIGR01607 180 SLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRV-FPTFRISKKIRYEKSPY-VNDIIKFDKFRYDGGITFNLASELI--- 254 (332)
T ss_pred EeccceEEecccCCCcchhhhhHHHHHHHHHHH-CCcccccCccccccChh-hhhHHhcCccccCCcccHHHHHHHH---
Confidence 998875211000000000000000111111111 10000000000000001 111110000 000000000000
Q ss_pred CChhhHhhhhccccccC--CccEEEEEcCCCCccCHHHHHHHHhhC--CCCeEEEecCCCCCCcccC-hHHHHHHHHHHh
Q 016103 316 PFAPVLEKLSLSDMKYG--SVRRFYIETPEDNAIPIALQQSMINSS--PPEKVFRLKGADHSPFFSK-PQALHKLLVEIS 390 (395)
Q Consensus 316 ~~~~~~~~~~~~~~~~~--~~PvliI~G~~D~~vp~~~~~~l~~~l--~~~~~~~i~~~GH~~~~e~-p~~v~~~I~~fl 390 (395)
.....+. .....+ ++|+|+|+|++|.+++++..+.+.+.+ ++.++.++++++|.++.|. .+++.+.|.+||
T Consensus 255 ---~~~~~~~-~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL 330 (332)
T TIGR01607 255 ---KATDTLD-CDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWI 330 (332)
T ss_pred ---HHHHHHH-hhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHh
Confidence 0000010 011112 689999999999999999988887765 5689999999999999885 688999999998
Q ss_pred c
Q 016103 391 K 391 (395)
Q Consensus 391 ~ 391 (395)
.
T Consensus 331 ~ 331 (332)
T TIGR01607 331 S 331 (332)
T ss_pred h
Confidence 6
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.88 E-value=9.6e-21 Score=184.19 Aligned_cols=217 Identities=12% Similarity=0.034 Sum_probs=140.8
Q ss_pred CCCCeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcEEE
Q 016103 139 LETNHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKVIL 214 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~l 214 (395)
...|+||++||+++.. ..|..+++.|+++||.|+++|+||+|.|..... ..+......++.+++... +. +++++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~-~~d~~~~~~avld~l~~~~~vd~-~ri~l 269 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKL-TQDSSLLHQAVLNALPNVPWVDH-TRVAA 269 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCc-cccHHHHHHHHHHHHHhCcccCc-ccEEE
Confidence 3456777777766553 578889999999999999999999999864321 133444556666666655 44 49999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
+||||||++|+.+|..+|++|+++|+++++...... ...... ...... ...+... ...... ....+..
T Consensus 270 ~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~-~~~~~~---~~p~~~---~~~la~~-lg~~~~----~~~~l~~ 337 (414)
T PRK05077 270 FGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT-DPKRQQ---QVPEMY---LDVLASR-LGMHDA----SDEALRV 337 (414)
T ss_pred EEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc-chhhhh---hchHHH---HHHHHHH-hCCCCC----ChHHHHH
Confidence 999999999999999999999999999887521000 000000 000000 0000000 000000 0000000
Q ss_pred HhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCC
Q 016103 295 LLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSP 374 (395)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~ 374 (395)
.+ ....+... ..+ ...+++|+|+|+|++|.++|++..+.+.+..++.++++++++ +
T Consensus 338 ~l-----------~~~sl~~~---~~l-------~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~ 393 (414)
T PRK05077 338 EL-----------NRYSLKVQ---GLL-------GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---P 393 (414)
T ss_pred Hh-----------hhccchhh---hhh-------ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---C
Confidence 00 00000000 000 123579999999999999999999999999999999999985 5
Q ss_pred cccChHHHHHHHHHHhcCC
Q 016103 375 FFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 375 ~~e~p~~v~~~I~~fl~~~ 393 (395)
+++.++++.+.|.+||+.+
T Consensus 394 ~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 394 VYRNFDKALQEISDWLEDR 412 (414)
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 6789999999999999753
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.87 E-value=5e-21 Score=181.33 Aligned_cols=240 Identities=13% Similarity=0.060 Sum_probs=134.7
Q ss_pred CCCCeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCcc---ChhhhHHHHHHHHHHCCCCCcEE
Q 016103 139 LETNHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGIT---SLSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
...|+||++||++++.. .+..++..|.++||+|+++|+||+|.+.......+ ..++....+..+.+.++.. +++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~~ 134 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHV-PTA 134 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCC-CEE
Confidence 34689999999977644 34678899999999999999999997753222212 2333333333344445664 899
Q ss_pred EEEeChhHHHHHHHHHHCCCC--cceEEEEcccccCCCcc-hhHHhhhcCCchH-HHHHHHH----HHhhcCCCCCCcch
Q 016103 214 LVGHDFGGACISYAMELFPFK--ISKAVFIAAAMLTNGQN-LLDMFSQQTGSTD-LMRQAQI----FLYANGNNKPPTAI 285 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~--V~~lVli~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~ 285 (395)
++||||||.+++.++.++++. |.++|+++++....... ........ .... +...+.. ..... ........
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~-~~~~~~~~ 212 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSR-VYQRYLLNLLKANAARKLAAY-PGTLPINL 212 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHHhc-cccccCCH
Confidence 999999999888888777643 89999999875321100 00000000 0000 0011110 00000 00000000
Q ss_pred h-hh----HHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC
Q 016103 286 D-LD----KSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP 360 (395)
Q Consensus 286 ~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~ 360 (395)
. .. ...+.+.+..... .+......+...+.. .....+++|+++|+|++|++++.+....+.+..+
T Consensus 213 ~~~~~~~~~~~fd~~~~~~~~--g~~~~~~~y~~~~~~--------~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~ 282 (324)
T PRK10985 213 AQLKSVRRLREFDDLITARIH--GFADAIDYYRQCSAL--------PLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP 282 (324)
T ss_pred HHHhcCCcHHHHhhhheeccC--CCCCHHHHHHHCChH--------HHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC
Confidence 0 00 0000000000000 000000000001111 1224557999999999999999988888878888
Q ss_pred CCeEEEecCCCCCCcccCh-----HHHHHHHHHHhc
Q 016103 361 PEKVFRLKGADHSPFFSKP-----QALHKLLVEISK 391 (395)
Q Consensus 361 ~~~~~~i~~~GH~~~~e~p-----~~v~~~I~~fl~ 391 (395)
+.++++++++||+.++|.. .-..+.+.+|+.
T Consensus 283 ~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 283 NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 9999999999999999852 245566666664
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.87 E-value=1.1e-20 Score=174.68 Aligned_cols=231 Identities=12% Similarity=0.069 Sum_probs=135.3
Q ss_pred CCCeEEEEcCCCC----ChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-----CCCC
Q 016103 140 ETNHFVLVHGGGF----GAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-----PDAE 210 (395)
Q Consensus 140 ~~~~vv~~HG~~~----~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-----~~~~ 210 (395)
.++.||++||+.. +...|..+++.|+++||.|+++|+||||.|.... .+++++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~- 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR- 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 4567888887653 3345778899999999999999999999986432 46667777777777765 454
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHH
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKS 290 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (395)
+++++|||+||.+++.+|.. +.+|+++|++++................ ........ .++.. .............
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~-~~~g~~~~~~~~~- 174 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHY-YLGQLLSA--DFWRK-LLSGEVNLGSSLR- 174 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHH-HHHHHhCh--HHHHH-hcCCCccHHHHHH-
Confidence 89999999999999999865 4689999999987542221111100000 00000000 00000 0000000000001
Q ss_pred HHHHHhcCCCchHHHHHHhhhcccC-CChhhHhhhhccccccCCccEEEEEcCCCCccCHHHH------HHHHhhC--CC
Q 016103 291 LLKELLFNQSPAKDIALASVSMRHI-PFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQ------QSMINSS--PP 361 (395)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~------~~l~~~l--~~ 361 (395)
.+...+. .. ...... ........+ ......+++|+++++|+.|...+ ... ..+.+.+ ++
T Consensus 175 ~~~~~~~--------~~--~~~~~~~~~~~~~~~~-~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~ 242 (274)
T TIGR03100 175 GLGDALL--------KA--RQKGDEVAHGGLAERM-KAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPG 242 (274)
T ss_pred HHHHHHH--------hh--hhcCCCcccchHHHHH-HHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCC
Confidence 1111000 00 000000 000011111 11122347999999999999864 322 4445544 78
Q ss_pred CeEEEecCCCCCCcccC-hHHHHHHHHHHhcC
Q 016103 362 EKVFRLKGADHSPFFSK-PQALHKLLVEISKL 392 (395)
Q Consensus 362 ~~~~~i~~~GH~~~~e~-p~~v~~~I~~fl~~ 392 (395)
++++++++++|++..+. ++++.+.|.+||++
T Consensus 243 v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 243 IERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred eEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 99999999999986665 48999999999964
No 51
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=3.7e-20 Score=161.33 Aligned_cols=184 Identities=13% Similarity=0.156 Sum_probs=127.6
Q ss_pred CeEEEEcCCCCChhhHHH--HHHHHHhC--CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 142 NHFVLVHGGGFGAWCWYK--TIALLEEG--GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~--~~~~L~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
|+|||+||++++...|.. +...|.+. +|+|+++|+||++ ++.++++.+++++++.+ +++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-PLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 689999999999999984 45666553 6999999999874 46788999999999886 9999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhc
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLF 297 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (395)
||||++++.+|.++|. .+|+++++..+ ..... .+..............+....+.+..
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~d~~- 126 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRP-----FELLT-------------DYLGENENPYTGQQYVLESRHIYDLK- 126 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCH-----HHHHH-------------HhcCCcccccCCCcEEEcHHHHHHHH-
Confidence 9999999999999983 46888886431 11111 00000000000000111112221110
Q ss_pred CCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCccc
Q 016103 298 NQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFS 377 (395)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e 377 (395)
.+..... ...+|+++|+|++|.+||++.+..+.+. +++.+++|++|.. +
T Consensus 127 -------------------------~~~~~~i-~~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~ 175 (190)
T PRK11071 127 -------------------------VMQIDPL-ESPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--V 175 (190)
T ss_pred -------------------------hcCCccC-CChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--h
Confidence 0000111 1357899999999999999999998884 4777889999987 5
Q ss_pred ChHHHHHHHHHHhc
Q 016103 378 KPQALHKLLVEISK 391 (395)
Q Consensus 378 ~p~~v~~~I~~fl~ 391 (395)
..+++.+.|.+|++
T Consensus 176 ~~~~~~~~i~~fl~ 189 (190)
T PRK11071 176 GFERYFNQIVDFLG 189 (190)
T ss_pred hHHHhHHHHHHHhc
Confidence 55889999999985
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.85 E-value=1e-21 Score=175.88 Aligned_cols=214 Identities=16% Similarity=0.154 Sum_probs=130.0
Q ss_pred CEEEEEcCCCCCCCCC---CCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 169 FKVTAIDLTGAGIHSF---DTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 169 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
|+|+++|+||+|.|+. .....++.+++++++..+++.++.+ +++++||||||.+++.+|..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999995 4556789999999999999999997 89999999999999999999999999999999962
Q ss_pred --c--CCCcchhH-HhhhcC--CchH-HHHHHHHHHhhcC----CCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcc
Q 016103 246 --L--TNGQNLLD-MFSQQT--GSTD-LMRQAQIFLYANG----NNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMR 313 (395)
Q Consensus 246 --~--~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (395)
. ........ .+.... .... ............. ..................+............ ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 156 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNM---FW 156 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHH---HH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhh---cc
Confidence 0 00000000 000000 0000 0000000000000 0000000000000000000000000000000 00
Q ss_pred cCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccChHHHHHHHH
Q 016103 314 HIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKPQALHKLLV 387 (395)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~ 387 (395)
.........-.......+++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 157 -~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 157 -NALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp -HHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred -ccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0000000000011234578999999999999999999999999999999999999999999999999999885
No 53
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=2.4e-19 Score=164.17 Aligned_cols=199 Identities=15% Similarity=0.139 Sum_probs=125.2
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcEEE
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA-GIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKVIL 214 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~l 214 (395)
.+.++||++||++.....+..+++.|+++||.|+.+|++|+ |.|+..... .+......|+..+++++ +. +++.|
T Consensus 35 ~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~-~t~s~g~~Dl~aaid~lk~~~~-~~I~L 112 (307)
T PRK13604 35 KKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDE-FTMSIGKNSLLTVVDWLNTRGI-NNLGL 112 (307)
T ss_pred CCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcccc-CcccccHHHHHHHHHHHHhcCC-CceEE
Confidence 34579999999999887899999999999999999999987 888654321 23333455665444443 55 49999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhh-cCCCCCCcchh-----h-
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYA-NGNNKPPTAID-----L- 287 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~- 287 (395)
+||||||.+|+..|... .++.+|+.+|+.... +.+.. ...+.+. ......+...+ +
T Consensus 113 iG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----d~l~~----------~~~~~~~~~p~~~lp~~~d~~g~~l~ 175 (307)
T PRK13604 113 IAASLSARIAYEVINEI--DLSFLITAVGVVNLR-----DTLER----------ALGYDYLSLPIDELPEDLDFEGHNLG 175 (307)
T ss_pred EEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----HHHHH----------hhhcccccCccccccccccccccccc
Confidence 99999999997777643 399999999875311 11110 0000000 00000000000 0
Q ss_pred hHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--CCeEE
Q 016103 288 DKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP--PEKVF 365 (395)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~--~~~~~ 365 (395)
...++...+ ...........+. ....++|+|+|||++|.+||.+.++.+.+.++ +.+++
T Consensus 176 ~~~f~~~~~--------------~~~~~~~~s~i~~-----~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~ 236 (307)
T PRK13604 176 SEVFVTDCF--------------KHGWDTLDSTINK-----MKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLY 236 (307)
T ss_pred HHHHHHHHH--------------hcCccccccHHHH-----HhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEE
Confidence 011111100 0000000000111 11235899999999999999999999999775 68999
Q ss_pred EecCCCCCCc
Q 016103 366 RLKGADHSPF 375 (395)
Q Consensus 366 ~i~~~GH~~~ 375 (395)
+++|++|.+.
T Consensus 237 ~i~Ga~H~l~ 246 (307)
T PRK13604 237 SLIGSSHDLG 246 (307)
T ss_pred EeCCCccccC
Confidence 9999999875
No 54
>PRK10566 esterase; Provisional
Probab=99.84 E-value=1.7e-19 Score=164.35 Aligned_cols=206 Identities=13% Similarity=0.134 Sum_probs=124.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccCh-------hhhHHHHHHHHHH---CC-
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSL-------SQYVKPLTDFLEK---LP- 207 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~-------~~~~~~l~~~l~~---l~- 207 (395)
+..|+||++||++++...|..++..|+++||.|+++|+||+|.+...... ..+ ....+++..+++. .+
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEA-RRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccc-cchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34689999999999998999999999999999999999999976322111 111 1122333333333 22
Q ss_pred CC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchh
Q 016103 208 DA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAID 286 (395)
Q Consensus 208 ~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (395)
++ ++++++|||+||.+++.++.++|+....++++++.. ...+. ...+.......+.
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~-------~~~~~-------------~~~~~~~~~~~~~--- 160 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGY-------FTSLA-------------RTLFPPLIPETAA--- 160 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHH-------HHHHH-------------HHhcccccccccc---
Confidence 22 489999999999999999998887443444443321 00000 0000000000000
Q ss_pred hhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC-----
Q 016103 287 LDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP----- 361 (395)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~----- 361 (395)
....+...+ ......+.......+ .++|+|+|+|++|.++|++..+.+.+.++.
T Consensus 161 -~~~~~~~~~-------------~~~~~~~~~~~~~~i-------~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~ 219 (249)
T PRK10566 161 -QQAEFNNIV-------------APLAEWEVTHQLEQL-------ADRPLLLWHGLADDVVPAAESLRLQQALRERGLDK 219 (249)
T ss_pred -cHHHHHHHH-------------HHHhhcChhhhhhhc-------CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 000000000 000000111111111 158999999999999999998888876642
Q ss_pred -CeEEEecCCCCCCcccChHHHHHHHHHHhcCC
Q 016103 362 -EKVFRLKGADHSPFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 362 -~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~~ 393 (395)
.++++++++||.+. + ...+.+.+||+++
T Consensus 220 ~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 220 NLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred ceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 46778899999863 3 4678888888764
No 55
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=3e-19 Score=176.46 Aligned_cols=238 Identities=16% Similarity=0.057 Sum_probs=143.7
Q ss_pred CCCeEEEEcCCCCChhhHH-----HHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEE
Q 016103 140 ETNHFVLVHGGGFGAWCWY-----KTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~-----~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
..++|||+||+.....+|. .+++.|.++||+|+++|++|+|.+..... ..+..+.+.+.|..+++.++.+ +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~-kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK-QVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC-CeE
Confidence 4689999999998888885 79999999999999999999998864322 2233444556677777778885 999
Q ss_pred EEEeChhHHHH---H-HHHHHC-CCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHh------hcCCCCCC
Q 016103 214 LVGHDFGGACI---S-YAMELF-PFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLY------ANGNNKPP 282 (395)
Q Consensus 214 lvGhS~Gg~~a---~-~~a~~~-p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 282 (395)
++||||||.++ + .++... +++|++++++++............+........+.+.....-+ ...+....
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 99999999985 2 245554 7899999999998765543333322211111111000000000 00000000
Q ss_pred cchhhhHHHHHHHhcCCC-------------c---hHHHHHHh-hhcccCCChhhHhhhh----ccccccCCccEEEEEc
Q 016103 283 TAIDLDKSLLKELLFNQS-------------P---AKDIALAS-VSMRHIPFAPVLEKLS----LSDMKYGSVRRFYIET 341 (395)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~PvliI~G 341 (395)
....+....+..++.... . ........ ..+....+.. ..+. ...+..+++|+++|+|
T Consensus 346 p~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~--G~~~v~g~~~dL~~I~vPvLvV~G 423 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTT--GGLEVCGVRLDLSKVKVPVYIIAT 423 (532)
T ss_pred hhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcC--CeeEECCEecchhhCCCCEEEEee
Confidence 000000011111111111 0 00000000 0111111110 1111 1234567899999999
Q ss_pred CCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccChH
Q 016103 342 PEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKPQ 380 (395)
Q Consensus 342 ~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~ 380 (395)
++|.++|.+....+.+.+++.+.++++++||.+++++|.
T Consensus 424 ~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 424 REDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 999999999999999999999999999999999999874
No 56
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.82 E-value=2.9e-20 Score=162.72 Aligned_cols=106 Identities=26% Similarity=0.372 Sum_probs=92.0
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCC--CCCcEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLP--DAEKVIL 214 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~--~~~~v~l 214 (395)
...+|.++++||.|.+.-+|..++..|... ..+|+++|+||||.+........+.+.++.|+.++++.+- ...+++|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 558999999999999999999999998764 4678889999999998877777999999999999998872 2259999
Q ss_pred EEeChhHHHHHHHHHH--CCCCcceEEEEccc
Q 016103 215 VGHDFGGACISYAMEL--FPFKISKAVFIAAA 244 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~--~p~~V~~lVli~~~ 244 (395)
|||||||.+|.+.|.. .|. +.+|+.|+-.
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999887764 566 9999999875
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=9.7e-19 Score=157.84 Aligned_cols=242 Identities=23% Similarity=0.273 Sum_probs=145.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGG--FKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
.|+||++||++.+...|......+.... |+|+++|+||||.|. .. .+....+++++..++++++.. +++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE-KVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC-ceEEEEec
Confidence 5599999999999999988444444321 899999999999997 11 245566699999999999996 79999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcc-----------hhHHhhhcCCchHHHHHHHHHHhhcC-CCCCCcchh
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQN-----------LLDMFSQQTGSTDLMRQAQIFLYANG-NNKPPTAID 286 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 286 (395)
+||.+++.++.++|+++.++|++++........ ............ ............ .......
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 172 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD--AAAFAALLAALGLLAALAAA-- 172 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc--hhhhhhhhhccccccccccc--
Confidence 999999999999999999999999865311000 000000000000 000000000000 0000000
Q ss_pred hhHHHHHHHhcCCCchHHHHHHhhhc---ccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC-C
Q 016103 287 LDKSLLKELLFNQSPAKDIALASVSM---RHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP-E 362 (395)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~-~ 362 (395)
......................... ...................+++|+++++|++|.+.|......+.+.+++ .
T Consensus 173 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~ 251 (282)
T COG0596 173 -ARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDA 251 (282)
T ss_pred -chhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCc
Confidence 0000000000000000000000000 0000000000011112334579999999999977777766777778885 8
Q ss_pred eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 363 KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 363 ~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
++.+++++||++++++|+.+++.+.+|+.
T Consensus 252 ~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 252 RLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred eEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 99999999999999999999999988654
No 58
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.81 E-value=4.5e-20 Score=153.97 Aligned_cols=232 Identities=14% Similarity=0.068 Sum_probs=154.7
Q ss_pred CCCCCeEEEEcCC-CCChhhHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccC---hhhhHHHHHHHHHHCCCCCcE
Q 016103 138 DLETNHFVLVHGG-GFGAWCWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITS---LSQYVKPLTDFLEKLPDAEKV 212 (395)
Q Consensus 138 ~~~~~~vv~~HG~-~~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~---~~~~~~~l~~~l~~l~~~~~v 212 (395)
+.+...|+++.|. |+....|.+....|.+. -+.|+++|-||+|.|..|.. .+. ....+++...+++.|... ++
T Consensus 39 G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~~~ff~~Da~~avdLM~aLk~~-~f 116 (277)
T KOG2984|consen 39 GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFEVQFFMKDAEYAVDLMEALKLE-PF 116 (277)
T ss_pred CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cchHHHHHHhHHHHHHHHHHhCCC-Ce
Confidence 3344578888987 55666898888777653 38999999999999975443 233 445567788888999996 99
Q ss_pred EEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHH
Q 016103 213 ILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLL 292 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (395)
.|+|||=||.+|+..|+++++.|.++|..++.........+. +.. ++....+.... ..+...-...+.+
T Consensus 117 svlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma-~kg-------iRdv~kWs~r~---R~P~e~~Yg~e~f 185 (277)
T KOG2984|consen 117 SVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMA-FKG-------IRDVNKWSARG---RQPYEDHYGPETF 185 (277)
T ss_pred eEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHH-Hhc-------hHHHhhhhhhh---cchHHHhcCHHHH
Confidence 999999999999999999999999999998865432211110 000 01111110000 0000000111111
Q ss_pred HHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCC
Q 016103 293 KELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADH 372 (395)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH 372 (395)
...+... .+.......+...++.. ..+..++||+|+++|+.|++++......+....+.+++.+++.++|
T Consensus 186 ~~~wa~w---vD~v~qf~~~~dG~fCr-------~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkH 255 (277)
T KOG2984|consen 186 RTQWAAW---VDVVDQFHSFCDGRFCR-------LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKH 255 (277)
T ss_pred HHHHHHH---HHHHHHHhhcCCCchHh-------hhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCc
Confidence 1111000 01111111222222211 1234568999999999999999999999999999999999999999
Q ss_pred CCcccChHHHHHHHHHHhcC
Q 016103 373 SPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 373 ~~~~e~p~~v~~~I~~fl~~ 392 (395)
.+++..+++|+..+.+||++
T Consensus 256 n~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 256 NFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred ceeeechHHHHHHHHHHHhc
Confidence 99999999999999999986
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.81 E-value=1.6e-18 Score=166.10 Aligned_cols=244 Identities=12% Similarity=0.094 Sum_probs=140.8
Q ss_pred CCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHH-----HHHHHHHCCCCC
Q 016103 141 TNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKP-----LTDFLEKLPDAE 210 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-----l~~~l~~l~~~~ 210 (395)
+++||++||+..+...| +.+++.|.++||+|+++|++|+|.+... .++++++.+ +..+++..+.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~----~~~~d~~~~~~~~~v~~l~~~~~~~- 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY----LTLDDYINGYIDKCVDYICRTSKLD- 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc----CCHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 45799999987665554 6899999999999999999999977532 356665532 33444555665
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcc-hhHHhhhcCCchHHHHH-------H--HHHHhhcCCCC
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQN-LLDMFSQQTGSTDLMRQ-------A--QIFLYANGNNK 280 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~ 280 (395)
+++++||||||.+++.++..+|++|+++|+++++....... ................. . ..+........
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSL 216 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchh
Confidence 99999999999999999999999999999999877543211 11111111110000000 0 00000000000
Q ss_pred CC----------cchhhhHHHH--HHHhcCCC--chHHHHHH-hhhcccCCChhhHhhhh----ccccccCCccEEEEEc
Q 016103 281 PP----------TAIDLDKSLL--KELLFNQS--PAKDIALA-SVSMRHIPFAPVLEKLS----LSDMKYGSVRRFYIET 341 (395)
Q Consensus 281 ~~----------~~~~~~~~~~--~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~PvliI~G 341 (395)
.. .........+ ..+..... ........ ...+....+.. ..+. ......+++|+++++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~--g~~~~~~~~~~l~~i~~Pvliv~G 294 (350)
T TIGR01836 217 GYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN--GEVEIGGRKVDLKNIKMPILNIYA 294 (350)
T ss_pred hhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC--CeeEECCEEccHHhCCCCeEEEec
Confidence 00 0000000000 00000000 00000000 00000000000 0000 0113356799999999
Q ss_pred CCCCccCHHHHHHHHhhCCC--CeEEEecCCCCCCcccCh---HHHHHHHHHHhcC
Q 016103 342 PEDNAIPIALQQSMINSSPP--EKVFRLKGADHSPFFSKP---QALHKLLVEISKL 392 (395)
Q Consensus 342 ~~D~~vp~~~~~~l~~~l~~--~~~~~i~~~GH~~~~e~p---~~v~~~I~~fl~~ 392 (395)
++|.++|++..+.+.+.+++ .++++++ +||+.++..+ +++...|.+||..
T Consensus 295 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 295 ERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 99999999999999998874 4566777 7999877654 7899999999875
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=7e-19 Score=146.37 Aligned_cols=144 Identities=21% Similarity=0.314 Sum_probs=111.0
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
+||++||++.+...|..+++.|+++||.|+.+|+||+|.+.. ....+++.+++. ....+.+ +++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~-~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG----ADAVERVLADIR--AGYPDPD-RIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH----SHHHHHHHHHHH--HHHCTCC-EEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch----hHHHHHHHHHHH--hhcCCCC-cEEEEEEccCcH
Confidence 699999999999999999999999999999999999997621 112222222222 1123554 999999999999
Q ss_pred HHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCch
Q 016103 223 CISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPA 302 (395)
Q Consensus 223 ~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (395)
+++.++.+. .+|+++|++++... .
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~--~----------------------------------------------------- 97 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD--S----------------------------------------------------- 97 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG--C-----------------------------------------------------
T ss_pred HHHHHhhhc-cceeEEEEecCccc--h-----------------------------------------------------
Confidence 999999988 67999999998210 0
Q ss_pred HHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC-CCeEEEecCCCCC
Q 016103 303 KDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP-PEKVFRLKGADHS 373 (395)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~-~~~~~~i~~~GH~ 373 (395)
..+. ..++|+++++|++|.++|.+..+.+.+.++ +.+++++++++|+
T Consensus 98 ----------------~~~~--------~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 98 ----------------EDLA--------KIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------HHHT--------TTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------hhhh--------ccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0000 114799999999999999999999888777 5799999999996
No 61
>PLN02872 triacylglycerol lipase
Probab=99.80 E-value=1.2e-18 Score=167.72 Aligned_cols=247 Identities=14% Similarity=0.138 Sum_probs=148.9
Q ss_pred CCCeEEEEcCCCCChhhHH------HHHHHHHhCCCEEEEEcCCCCCCCCC----CC-C---CccChhhhH-HHHHHHHH
Q 016103 140 ETNHFVLVHGGGFGAWCWY------KTIALLEEGGFKVTAIDLTGAGIHSF----DT-N---GITSLSQYV-KPLTDFLE 204 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~------~~~~~L~~~G~~v~~~d~~G~G~s~~----~~-~---~~~~~~~~~-~~l~~~l~ 204 (395)
.+|+|||+||++.++..|. .++..|+++||+|+++|+||++.+.. .. . ..+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4689999999999988883 46667899999999999999876532 11 1 136788888 78988888
Q ss_pred HC---CCCCcEEEEEeChhHHHHHHHHHHCCC---CcceEEEEcccccCCC-cc-hhHHhhh--------------cCCc
Q 016103 205 KL---PDAEKVILVGHDFGGACISYAMELFPF---KISKAVFIAAAMLTNG-QN-LLDMFSQ--------------QTGS 262 (395)
Q Consensus 205 ~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~V~~lVli~~~~~~~~-~~-~~~~~~~--------------~~~~ 262 (395)
++ .. +++++||||+||.+++.++ .+|+ +|+.+++++|...... .. ....+.. ....
T Consensus 153 ~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 76 33 4999999999999998655 5776 6888999988754221 11 1111000 0000
Q ss_pred hHHHHHHHHHHh------------hcCCCCCCcchhhhHHHHHHHhc---CCCchHHHHHHhh-----hcccCCChhhHh
Q 016103 263 TDLMRQAQIFLY------------ANGNNKPPTAIDLDKSLLKELLF---NQSPAKDIALASV-----SMRHIPFAPVLE 322 (395)
Q Consensus 263 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~~~~~~~~~ 322 (395)
......+...+. ..+.. . .+....+...+. ............. .++..++.....
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~----~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n 305 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITGTN-C----CFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKN 305 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhCCC-c----ccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhh
Confidence 111111111000 00000 0 011111111111 1111111111111 122233321111
Q ss_pred hhhc-----c--ccccC--CccEEEEEcCCCCccCHHHHHHHHhhCCC-CeEEEecCCCCCC---cccChHHHHHHHHHH
Q 016103 323 KLSL-----S--DMKYG--SVRRFYIETPEDNAIPIALQQSMINSSPP-EKVFRLKGADHSP---FFSKPQALHKLLVEI 389 (395)
Q Consensus 323 ~~~~-----~--~~~~~--~~PvliI~G~~D~~vp~~~~~~l~~~l~~-~~~~~i~~~GH~~---~~e~p~~v~~~I~~f 389 (395)
.... . ....+ ++|+++++|++|.+++++..+.+.+.+++ .+++.++++||.. ..+.|+++.+.|.+|
T Consensus 306 ~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~f 385 (395)
T PLN02872 306 LKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQF 385 (395)
T ss_pred HHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHH
Confidence 1000 0 12333 57999999999999999999999999887 5888999999963 458899999999999
Q ss_pred hcCC
Q 016103 390 SKLP 393 (395)
Q Consensus 390 l~~~ 393 (395)
+++.
T Consensus 386 L~~~ 389 (395)
T PLN02872 386 FRSL 389 (395)
T ss_pred HHHh
Confidence 9864
No 62
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.78 E-value=4.8e-17 Score=144.21 Aligned_cols=233 Identities=15% Similarity=0.107 Sum_probs=160.9
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
.+||-+||.+++..+|.++...|.+.|+|+|.+++||+|.+..+....++-++....+.++|+.++++++++++|||.|+
T Consensus 36 gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 36 GTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 38999999999999999999999999999999999999999988888899999999999999999999899999999999
Q ss_pred HHHHHHHHHCCCCcceEEEEcccccCCC--cchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCC
Q 016103 222 ACISYAMELFPFKISKAVFIAAAMLTNG--QNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQ 299 (395)
Q Consensus 222 ~~a~~~a~~~p~~V~~lVli~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (395)
-.|+.++..+| +.++++++++..... ......+........+ +..++ ...+.....+..-+..
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~---lp~~~----------~~~i~~~~y~~iG~KV 180 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDL---LPRFI----------INAIMYFYYRMIGFKV 180 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHH---hhHHH----------HHHHHHHHHHHhCeee
Confidence 99999999986 779999999875432 2222121111000000 00000 0001111122222222
Q ss_pred CchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC------------------
Q 016103 300 SPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP------------------ 361 (395)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~------------------ 361 (395)
...+....+...+...++....+.+.. ....++|+++++|.+|.++-.+...+++..+.+
T Consensus 181 ~~GeeA~na~r~m~~~df~~q~~~I~~--ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI 258 (297)
T PF06342_consen 181 SDGEEAINAMRSMQNCDFEEQKEYIDK--LNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKI 258 (297)
T ss_pred cChHHHHHHHHHHHhcCHHHHHHHHHH--hccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHH
Confidence 233444444444555555554444432 223358999999999999877665555433211
Q ss_pred ---------CeEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 362 ---------EKVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 362 ---------~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
..-+.+...||+..-.+++-+++.+...|+
T Consensus 259 ~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 259 LKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 123455566999999999999888877653
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.77 E-value=2e-17 Score=178.03 Aligned_cols=248 Identities=15% Similarity=0.103 Sum_probs=144.6
Q ss_pred CCCCeEEEEcCCCCChhhHHHH-----HHHHHhCCCEEEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHH---CCCC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKT-----IALLEEGGFKVTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEK---LPDA 209 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~-----~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~---l~~~ 209 (395)
..+++|||+||++.+...|... ++.|.++||+|+++|+ |.++.+.. ...++.+++..+.+.++. +..+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 3568999999999999999864 8899999999999995 55544322 135677777766666654 3444
Q ss_pred CcEEEEEeChhHHHHHHHHHHC-CCCcceEEEEcccccCCCc---chhH------------HhhhcCCchHH-H------
Q 016103 210 EKVILVGHDFGGACISYAMELF-PFKISKAVFIAAAMLTNGQ---NLLD------------MFSQQTGSTDL-M------ 266 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~-p~~V~~lVli~~~~~~~~~---~~~~------------~~~~~~~~~~~-~------ 266 (395)
+++|+||||||.+++.++..+ +++|+++|+++++...... .... .+......... .
T Consensus 142 -~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 142 -DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred -ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 899999999999999988755 5689999999887543211 0000 00000010000 0
Q ss_pred -------HHHHHHHhhcCCCCCCcchhhhHHHHHHH-hcCCCchHHHHHHhhhcccCCChhhHhhhhc----cccccCCc
Q 016103 267 -------RQAQIFLYANGNNKPPTAIDLDKSLLKEL-LFNQSPAKDIALASVSMRHIPFAPVLEKLSL----SDMKYGSV 334 (395)
Q Consensus 267 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 334 (395)
.....++............+....++... +...................... ...+.. ..+..+++
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~--~g~~~~~~~~~~L~~i~~ 298 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMM--TGGFAINGQMVTLADITC 298 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCccc--CceEEECCEEcchhhCCC
Confidence 00000000000000000000000111110 00000000000000000000000 000000 12456689
Q ss_pred cEEEEEcCCCCccCHHHHHHHHhhCCCCeE-EEecCCCCCCccc---ChHHHHHHHHHHhcC
Q 016103 335 RRFYIETPEDNAIPIALQQSMINSSPPEKV-FRLKGADHSPFFS---KPQALHKLLVEISKL 392 (395)
Q Consensus 335 PvliI~G~~D~~vp~~~~~~l~~~l~~~~~-~~i~~~GH~~~~e---~p~~v~~~I~~fl~~ 392 (395)
|+|+|+|++|.++|++..+.+.+.++++++ .+++++||+.++- -++++...|.+||..
T Consensus 299 P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 299 PVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 999999999999999999999999999987 6789999998765 467888999999875
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=1e-16 Score=144.36 Aligned_cols=176 Identities=11% Similarity=0.007 Sum_probs=120.0
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCC----------CCCcc---ChhhhHHHHHHH--
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFD----------TNGIT---SLSQYVKPLTDF-- 202 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~----------~~~~~---~~~~~~~~l~~~-- 202 (395)
....|.|||+||+|++...|..+++.|...++.+.+++.+|....... ..... .+.+..+.+.++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999876655555555554322100 00001 112222233333
Q ss_pred --HHHCCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCC
Q 016103 203 --LEKLPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNN 279 (395)
Q Consensus 203 --l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
.+.++++ ++++|+|||+||.+++.++.++|+.+.++|.+++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------------- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------------- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc-------------------------------
Confidence 3344443 489999999999999999999998888887776532100
Q ss_pred CCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC
Q 016103 280 KPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS 359 (395)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l 359 (395)
+. ......|+++++|++|.++|.+..+.+.+.+
T Consensus 142 --~~---------------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L 174 (232)
T PRK11460 142 --PE---------------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEAL 174 (232)
T ss_pred --cc---------------------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHH
Confidence 00 0001479999999999999999888777765
Q ss_pred C----CCeEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 360 P----PEKVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 360 ~----~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
. ++++++++++||.+..+.-+.+.+.|.++|.
T Consensus 175 ~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 175 ISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred HHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 3 4578889999999876666667777766664
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=5.3e-16 Score=135.13 Aligned_cols=228 Identities=11% Similarity=-0.003 Sum_probs=149.2
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
...+..++++|=.|+++..|+.|...|... +.++++++||+|.--.. ....+++++++.|...+...-.+.++.++||
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~e-p~~~di~~Lad~la~el~~~~~d~P~alfGH 81 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGE-PLLTDIESLADELANELLPPLLDAPFALFGH 81 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCC-cccccHHHHHHHHHHHhccccCCCCeeeccc
Confidence 345678999999999999999999999885 99999999999976432 2346899999999988884222359999999
Q ss_pred ChhHHHHHHHHHHCCC---CcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 218 DFGGACISYAMELFPF---KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~---~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
||||++|.++|.++-. .+..+.+.+...+.... ...........+++.+..+-. .. + ..+....+..
T Consensus 82 SmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~---~~~i~~~~D~~~l~~l~~lgG---~p--~--e~led~El~~ 151 (244)
T COG3208 82 SMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR---GKQIHHLDDADFLADLVDLGG---TP--P--ELLEDPELMA 151 (244)
T ss_pred chhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc---cCCccCCCHHHHHHHHHHhCC---CC--h--HHhcCHHHHH
Confidence 9999999999987422 25566666655441100 000111111222222222111 00 0 0111112222
Q ss_pred HhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC-CCeEEEecCCCCC
Q 016103 295 LLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP-PEKVFRLKGADHS 373 (395)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~-~~~~~~i~~~GH~ 373 (395)
++......+.. ..+..........+||+.++.|++|..+..+....+.++.. ..++.+++| ||+
T Consensus 152 l~LPilRAD~~--------------~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHF 216 (244)
T COG3208 152 LFLPILRADFR--------------ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHF 216 (244)
T ss_pred HHHHHHHHHHH--------------HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-cce
Confidence 22111111111 11111122223457999999999999999999999998877 568999995 999
Q ss_pred CcccChHHHHHHHHHHhcC
Q 016103 374 PFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 374 ~~~e~p~~v~~~I~~fl~~ 392 (395)
...++.+++.+.|.+.+..
T Consensus 217 fl~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 217 FLNQQREEVLARLEQHLAH 235 (244)
T ss_pred ehhhhHHHHHHHHHHHhhh
Confidence 9999999999999998864
No 66
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.70 E-value=5.3e-16 Score=135.98 Aligned_cols=189 Identities=16% Similarity=0.190 Sum_probs=131.8
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-CCCCcEEEEEeC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-PDAEKVILVGHD 218 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS 218 (395)
.++|+++||...+...-..+...|.. -+++|+.+|+.|+|.|...+.+. .+-+.++.+.++|..- |.+++++|+|+|
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~-n~y~Di~avye~Lr~~~g~~~~Iil~G~S 138 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER-NLYADIKAVYEWLRNRYGSPERIILYGQS 138 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc-cchhhHHHHHHHHHhhcCCCceEEEEEec
Confidence 48999999996666644445555554 25999999999999998776553 4444444555555443 333699999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcC
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFN 298 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (395)
+|...++.+|.++| +.++||.+|.... ++.+..... .. +++
T Consensus 139 iGt~~tv~Lasr~~--~~alVL~SPf~S~-----~rv~~~~~~---------------------~~----------~~~- 179 (258)
T KOG1552|consen 139 IGTVPTVDLASRYP--LAAVVLHSPFTSG-----MRVAFPDTK---------------------TT----------YCF- 179 (258)
T ss_pred CCchhhhhHhhcCC--cceEEEeccchhh-----hhhhccCcc---------------------eE----------Eee-
Confidence 99999999999998 9999999987421 000000000 00 000
Q ss_pred CCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCC-eEEEecCCCCCCccc
Q 016103 299 QSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPE-KVFRLKGADHSPFFS 377 (395)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~-~~~~i~~~GH~~~~e 377 (395)
+.... ......++||+|++||++|.+++......+.+..++. +-.++.|+||.-..-
T Consensus 180 -----------------d~f~~-----i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~ 237 (258)
T KOG1552|consen 180 -----------------DAFPN-----IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL 237 (258)
T ss_pred -----------------ccccc-----cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccccc
Confidence 00000 1223456899999999999999999999999999875 888999999987554
Q ss_pred ChHHHHHHHHHHhcC
Q 016103 378 KPQALHKLLVEISKL 392 (395)
Q Consensus 378 ~p~~v~~~I~~fl~~ 392 (395)
.| ++.+.|..|+..
T Consensus 238 ~~-~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 238 YP-EYIEHLRRFISS 251 (258)
T ss_pred CH-HHHHHHHHHHHH
Confidence 44 577777777653
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.69 E-value=3.9e-16 Score=142.20 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=85.9
Q ss_pred CCeEEEEcCCCCC----hhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHH---HHHCCCCCcEE
Q 016103 141 TNHFVLVHGGGFG----AWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDF---LEKLPDAEKVI 213 (395)
Q Consensus 141 ~~~vv~~HG~~~~----~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~---l~~l~~~~~v~ 213 (395)
.++|||+||++.. ...|..+++.|+++||.|+++|+||||.|..... ..+++.+++|+..+ +++.+.. +++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~-~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHP-PVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCC-CEE
Confidence 5789999999864 3567888999999999999999999999975433 34677777777665 4455664 999
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
|+||||||.+++.++.++|+++.++|++++..
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 99999999999999999999999999999764
No 68
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.68 E-value=1.3e-15 Score=137.99 Aligned_cols=248 Identities=17% Similarity=0.125 Sum_probs=130.7
Q ss_pred CCCCCeEEEEcCCCCCh-h-hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcE
Q 016103 138 DLETNHFVLVHGGGFGA-W-CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKV 212 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~-~-~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v 212 (395)
....|.||++||+.++. + .-+.+.+.+.++||.|+++++|||+.+.......++.-+ .+|+..+++.+ ....++
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~-t~D~~~~l~~l~~~~~~r~~ 150 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGE-TEDIRFFLDWLKARFPPRPL 150 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccc-hhHHHHHHHHHHHhCCCCce
Confidence 55679999999994444 3 346788999999999999999999988653333222211 14454444443 444699
Q ss_pred EEEEeChhH-HHHHHHHHHCCC-CcceEEEEcccccCCC-cchhH-HhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhh
Q 016103 213 ILVGHDFGG-ACISYAMELFPF-KISKAVFIAAAMLTNG-QNLLD-MFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLD 288 (395)
Q Consensus 213 ~lvGhS~Gg-~~a~~~a~~~p~-~V~~lVli~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (395)
..+|.|+|| +++..++.+--+ .+.+.+.++.+..... ...++ .+....-...+.+.+......+.....+......
T Consensus 151 ~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~ 230 (345)
T COG0429 151 YAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV 230 (345)
T ss_pred EEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH
Confidence 999999999 566666654222 4666666666542210 00000 0000000011111111111111110100000000
Q ss_pred HHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhh----ccccccCCccEEEEEcCCCCccCHHHHHHHHh-hCCCCe
Q 016103 289 KSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLS----LSDMKYGSVRRFYIETPEDNAIPIALQQSMIN-SSPPEK 363 (395)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~-~l~~~~ 363 (395)
...++..-. ...-+... ......+.+..+... ...+..|.+|+|+|++.+|++++++....... ..|++.
T Consensus 231 ~~~ik~~~t--i~eFD~~~---Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~ 305 (345)
T COG0429 231 LAAIKRCRT--IREFDDLL---TAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVL 305 (345)
T ss_pred HHHHHhhch--HHhcccee---eecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceE
Confidence 000000000 00000000 000011111111111 12245668999999999999999988766655 778899
Q ss_pred EEEecCCCCCCccc----ChH-HHHHHHHHHhc
Q 016103 364 VFRLKGADHSPFFS----KPQ-ALHKLLVEISK 391 (395)
Q Consensus 364 ~~~i~~~GH~~~~e----~p~-~v~~~I~~fl~ 391 (395)
+.+-+.+||..++. +|. -..+.|.+|++
T Consensus 306 l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 306 LQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred EEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 99999999999988 343 34556666654
No 69
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.68 E-value=9.3e-16 Score=136.47 Aligned_cols=192 Identities=15% Similarity=0.107 Sum_probs=113.0
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCCCCCCCC-------CCCccChhhhHHHHHHHHHHCCCC-CcEEEEEeChhHHHHHHH
Q 016103 156 CWYKTIALLEEGGFKVTAIDLTGAGIHSFD-------TNGITSLSQYVKPLTDFLEKLPDA-EKVILVGHDFGGACISYA 227 (395)
Q Consensus 156 ~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~ 227 (395)
.|......|+++||.|+.+|+||.+..... ......++|..+.+..+++...++ +++.|+|||+||++++.+
T Consensus 2 ~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~ 81 (213)
T PF00326_consen 2 SFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLA 81 (213)
T ss_dssp --SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchh
Confidence 355677889999999999999998753211 111123344444444444443332 599999999999999999
Q ss_pred HHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHH
Q 016103 228 MELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIAL 307 (395)
Q Consensus 228 a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (395)
+.++|++++++|..++............. ... ......-...........
T Consensus 82 ~~~~~~~f~a~v~~~g~~d~~~~~~~~~~---------~~~---------------------~~~~~~~~~~~~~~~~~~ 131 (213)
T PF00326_consen 82 ATQHPDRFKAAVAGAGVSDLFSYYGTTDI---------YTK---------------------AEYLEYGDPWDNPEFYRE 131 (213)
T ss_dssp HHHTCCGSSEEEEESE-SSTTCSBHHTCC---------HHH---------------------GHHHHHSSTTTSHHHHHH
T ss_pred hcccceeeeeeeccceecchhcccccccc---------ccc---------------------ccccccCccchhhhhhhh
Confidence 99999999999999987543221100000 000 000000000000111100
Q ss_pred HhhhcccCCChhhHhhhhcccccc--CCccEEEEEcCCCCccCHHHHHHHHhhC----CCCeEEEecCCCCCCc-ccChH
Q 016103 308 ASVSMRHIPFAPVLEKLSLSDMKY--GSVRRFYIETPEDNAIPIALQQSMINSS----PPEKVFRLKGADHSPF-FSKPQ 380 (395)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~PvliI~G~~D~~vp~~~~~~l~~~l----~~~~~~~i~~~GH~~~-~e~p~ 380 (395)
... ...... .++|+|+++|++|..||++....+.+.+ ...+++++|++||.+. .+...
T Consensus 132 ~s~---------------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~ 196 (213)
T PF00326_consen 132 LSP---------------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRR 196 (213)
T ss_dssp HHH---------------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHH
T ss_pred hcc---------------ccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHH
Confidence 000 000111 3699999999999999998877766554 3579999999999544 34455
Q ss_pred HHHHHHHHHhcC
Q 016103 381 ALHKLLVEISKL 392 (395)
Q Consensus 381 ~v~~~I~~fl~~ 392 (395)
++.+.+.+|+++
T Consensus 197 ~~~~~~~~f~~~ 208 (213)
T PF00326_consen 197 DWYERILDFFDK 208 (213)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 778888888875
No 70
>PLN02442 S-formylglutathione hydrolase
Probab=99.67 E-value=6.7e-15 Score=136.56 Aligned_cols=108 Identities=16% Similarity=0.129 Sum_probs=77.7
Q ss_pred CCCCCeEEEEcCCCCChhhHHH---HHHHHHhCCCEEEEEcCCCCCCC-----CC-----C-------C-C-----C--c
Q 016103 138 DLETNHFVLVHGGGFGAWCWYK---TIALLEEGGFKVTAIDLTGAGIH-----SF-----D-------T-N-----G--I 189 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~---~~~~L~~~G~~v~~~d~~G~G~s-----~~-----~-------~-~-----~--~ 189 (395)
....|+|+|+||++++...|.. +...+...|+.|+.+|..++|.. .. . . . . .
T Consensus 44 ~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (283)
T PLN02442 44 SGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYD 123 (283)
T ss_pred CCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhh
Confidence 3457999999999988887744 44667778999999998876611 00 0 0 0 0 0
Q ss_pred cChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 190 TSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 190 ~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+-.+++.+.+...++.++.+ +++|+||||||++|+.++.++|+++++++.+++...
T Consensus 124 ~~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 124 YVVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred hHHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 11233333444444556665 899999999999999999999999999999998753
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.66 E-value=1.2e-14 Score=134.41 Aligned_cols=108 Identities=18% Similarity=0.157 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHH--HHHH-HhCCCEEEEEcC--CCCCCCCCC-------------------CCCccChhh
Q 016103 139 LETNHFVLVHGGGFGAWCWYKT--IALL-EEGGFKVTAIDL--TGAGIHSFD-------------------TNGITSLSQ 194 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~--~~~L-~~~G~~v~~~d~--~G~G~s~~~-------------------~~~~~~~~~ 194 (395)
.+.|+|||+||++++...|... +..+ .+.||.|++||. +|+|.+... ....+...+
T Consensus 40 ~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~ 119 (275)
T TIGR02821 40 GPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYS 119 (275)
T ss_pred CCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHH
Confidence 3469999999999998888543 3344 456999999998 555432210 000122333
Q ss_pred -hHHHHHHHHHH-CCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 195 -YVKPLTDFLEK-LPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 195 -~~~~l~~~l~~-l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++++|..+++. ++++ ++++|+||||||++|+.++.++|+.+.+++++++...
T Consensus 120 ~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 120 YIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 35778787876 3332 4899999999999999999999999999999988753
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.66 E-value=3.4e-15 Score=126.27 Aligned_cols=219 Identities=16% Similarity=0.162 Sum_probs=140.9
Q ss_pred CCCCCCCeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCc--
Q 016103 136 LPDLETNHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEK-- 211 (395)
Q Consensus 136 ~~~~~~~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~-- 211 (395)
...++...||++||+-++.. ....++..|++.|+.++.+|++|.|.|+..-. .......++|+..+++++.-..+
T Consensus 28 h~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~~eadDL~sV~q~~s~~nr~v 106 (269)
T KOG4667|consen 28 HETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYNTEADDLHSVIQYFSNSNRVV 106 (269)
T ss_pred eccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCcccchHHHHHHHHHHhccCceEE
Confidence 34667889999999976554 45678899999999999999999999975432 12344556999999998843223
Q ss_pred EEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCC-CC----cchh
Q 016103 212 VILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNK-PP----TAID 286 (395)
Q Consensus 212 v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~ 286 (395)
-+++|||-||.+++.+|.++.+ +.-+|-+++...... .... ..-+....++...++.. .+ ....
T Consensus 107 ~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~--~I~e--------Rlg~~~l~~ike~Gfid~~~rkG~y~~r 175 (269)
T KOG4667|consen 107 PVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN--GINE--------RLGEDYLERIKEQGFIDVGPRKGKYGYR 175 (269)
T ss_pred EEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc--chhh--------hhcccHHHHHHhCCceecCcccCCcCce
Confidence 3788999999999999999988 777887776543211 0100 00011111111111111 11 0111
Q ss_pred hhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEE
Q 016103 287 LDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFR 366 (395)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~ 366 (395)
+....+.+.+. .+..+....+ ..+||||-+||..|.+||.+.+..+++.+|+-++.+
T Consensus 176 vt~eSlmdrLn-----------------td~h~aclkI------d~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L~i 232 (269)
T KOG4667|consen 176 VTEESLMDRLN-----------------TDIHEACLKI------DKQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKLEI 232 (269)
T ss_pred ecHHHHHHHHh-----------------chhhhhhcCc------CccCceEEEeccCCceeechhHHHHHHhccCCceEE
Confidence 11111111110 0111111112 236999999999999999999999999999999999
Q ss_pred ecCCCCCCcccChHHHHHHHHHHh
Q 016103 367 LKGADHSPFFSKPQALHKLLVEIS 390 (395)
Q Consensus 367 i~~~GH~~~~e~p~~v~~~I~~fl 390 (395)
++|++|.....+ .++......|.
T Consensus 233 IEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 233 IEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred ecCCCcCccchh-hhHhhhcceeE
Confidence 999999876543 33444444444
No 73
>PLN00021 chlorophyllase
Probab=99.63 E-value=1.2e-14 Score=135.98 Aligned_cols=106 Identities=18% Similarity=0.073 Sum_probs=77.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH-------CCCCC
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK-------LPDAE 210 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-------l~~~~ 210 (395)
.+..|+|||+||++.+...|..++++|+++||.|+++|++|++.... .....+..+..+.+.+.++. .+. +
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~-~ 126 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-TDEIKDAAAVINWLSSGLAAVLPEGVRPDL-S 126 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc-hhhHHHHHHHHHHHHhhhhhhcccccccCh-h
Confidence 45578999999999999999999999999999999999998753321 11111122222333332222 233 3
Q ss_pred cEEEEEeChhHHHHHHHHHHCCC-----CcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMELFPF-----KISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~-----~V~~lVli~~~~ 245 (395)
+++|+|||+||.+|+.+|..+++ +++++|++++..
T Consensus 127 ~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 127 KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred heEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 89999999999999999998874 578999998853
No 74
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.8e-14 Score=132.60 Aligned_cols=253 Identities=14% Similarity=0.123 Sum_probs=151.4
Q ss_pred CCCCCeEEEEcCCCCChhhHH-------HHHHHHH-------hCCCEEEEEcCCCCC-CCCCCC----C--------Ccc
Q 016103 138 DLETNHFVLVHGGGFGAWCWY-------KTIALLE-------EGGFKVTAIDLTGAG-IHSFDT----N--------GIT 190 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~-------~~~~~L~-------~~G~~v~~~d~~G~G-~s~~~~----~--------~~~ 190 (395)
....+.|+++||+.++..... .|.+.|. -..|.||++|-.|.+ .|+.|. . ...
T Consensus 48 ~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ 127 (368)
T COG2021 48 AEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVI 127 (368)
T ss_pred ccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcc
Confidence 344679999999988654332 1333332 234999999999986 343322 1 236
Q ss_pred ChhhhHHHHHHHHHHCCCCCcEE-EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhH------HhhhcCCc-
Q 016103 191 SLSQYVKPLTDFLEKLPDAEKVI-LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLD------MFSQQTGS- 262 (395)
Q Consensus 191 ~~~~~~~~l~~~l~~l~~~~~v~-lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~------~~~~~~~~- 262 (395)
+++|++..-..++++||++ ++. +||.||||+.|++++..||++|..+|.+++........... .....+.+
T Consensus 128 ti~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n 206 (368)
T COG2021 128 TIRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWN 206 (368)
T ss_pred cHHHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 7889998888999999997 655 99999999999999999999999999999976544322110 00000111
Q ss_pred ----------hHHHHHHHHHHhhcCC---------C----CCCcc---hhhhHHHHH----HHhcCCCchHHHHHHhhhc
Q 016103 263 ----------TDLMRQAQIFLYANGN---------N----KPPTA---IDLDKSLLK----ELLFNQSPAKDIALASVSM 312 (395)
Q Consensus 263 ----------~~~~~~~~~~~~~~~~---------~----~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 312 (395)
..-++........... . ..+.. ..+..+.+. +.+........+......+
T Consensus 207 ~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~al 286 (368)
T COG2021 207 GGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRAL 286 (368)
T ss_pred CCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 1111111111110000 0 00000 001111110 0111111122222222222
Q ss_pred ccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCe-EEEec-CCCCCCcccChHHHHHHHHHHh
Q 016103 313 RHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEK-VFRLK-GADHSPFFSKPQALHKLLVEIS 390 (395)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~-~~~i~-~~GH~~~~e~p~~v~~~I~~fl 390 (395)
...+...-...+ ...+..+++|++++.-+.|.++|++.++.+.+.++.+. +++|+ ..||-.|+...+.+...|..||
T Consensus 287 d~~D~s~~~~~l-~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL 365 (368)
T COG2021 287 DYHDVSRGRGDL-TAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFL 365 (368)
T ss_pred HhcCCCCCcCcH-HHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHh
Confidence 222221111000 11234567999999999999999999999999998876 65664 6799999999999999999999
Q ss_pred cC
Q 016103 391 KL 392 (395)
Q Consensus 391 ~~ 392 (395)
+.
T Consensus 366 ~~ 367 (368)
T COG2021 366 AL 367 (368)
T ss_pred hc
Confidence 74
No 75
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.62 E-value=7.7e-15 Score=150.16 Aligned_cols=206 Identities=18% Similarity=0.202 Sum_probs=131.8
Q ss_pred CeEEEEcCCCCChhh--HHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCccChhhhHHHHHHHHHHCCCC--C
Q 016103 142 NHFVLVHGGGFGAWC--WYKTIALLEEGGFKVTAIDLTGAGIHSF-------DTNGITSLSQYVKPLTDFLEKLPDA--E 210 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~--~~~~~~~L~~~G~~v~~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~l~~~--~ 210 (395)
|+||++||.+..... |....+.|+.+||.|+.+++||++.-.. ........+++.+.+. ++...+.- +
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 899999999755544 6778889999999999999998765311 1112245666666666 66555432 4
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHH
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKS 290 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (395)
++.|.|||+||++++.++.+.| .+++.|...+.... ...+... ...+...
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~-----~~~~~~~--~~~~~~~---------------------- 523 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW-----LLYFGES--TEGLRFD---------------------- 523 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh-----hhhcccc--chhhcCC----------------------
Confidence 9999999999999999999888 67777776664321 0000000 0000000
Q ss_pred HHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC----CCeEEE
Q 016103 291 LLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP----PEKVFR 366 (395)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~----~~~~~~ 366 (395)
.......... +...+...........+++|+|+|||++|..||.+.+..+.+.+. .+++++
T Consensus 524 -~~~~~~~~~~--------------~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~ 588 (620)
T COG1506 524 -PEENGGGPPE--------------DREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVV 588 (620)
T ss_pred -HHHhCCCccc--------------ChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEE
Confidence 0000000000 000011111112233457999999999999999998877776553 568999
Q ss_pred ecCCCCCCcc-cChHHHHHHHHHHhcCC
Q 016103 367 LKGADHSPFF-SKPQALHKLLVEISKLP 393 (395)
Q Consensus 367 i~~~GH~~~~-e~p~~v~~~I~~fl~~~ 393 (395)
+|+.||.+.- ++-..+.+.+.+|++++
T Consensus 589 ~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 589 FPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred eCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 9999998776 44556778888888764
No 76
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=2.7e-14 Score=126.95 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=76.8
Q ss_pred CCCCeEEEEcCCCCChhhHH---HHHHHHHhCCCEEEEEcCCCCCCCCCCCC---------CccChhhhHHHHHHHHHHC
Q 016103 139 LETNHFVLVHGGGFGAWCWY---KTIALLEEGGFKVTAIDLTGAGIHSFDTN---------GITSLSQYVKPLTDFLEKL 206 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~---~~~~~L~~~G~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~~l~~~l~~l 206 (395)
...|+||++||.+.+...|. .+...+.+.||.|++||++|++.+..... ......++.+.+..+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 45789999999998887775 35566666799999999999875432110 0011122222333333334
Q ss_pred CCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 207 PDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 207 ~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 443 4899999999999999999999999999999988653
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.59 E-value=1.7e-14 Score=128.67 Aligned_cols=179 Identities=14% Similarity=0.137 Sum_probs=105.9
Q ss_pred CCCCCCeEEEEcCCCCChhhHHHHHH-HHHhCCCEEEEEcCCC------CCC---CCCC-----CCC---ccChhhhHHH
Q 016103 137 PDLETNHFVLVHGGGFGAWCWYKTIA-LLEEGGFKVTAIDLTG------AGI---HSFD-----TNG---ITSLSQYVKP 198 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~~~~~~-~L~~~G~~v~~~d~~G------~G~---s~~~-----~~~---~~~~~~~~~~ 198 (395)
.....++|||+||+|.+...|..+.. .+......++.++-|- .|. +..+ ... ...+.+.++.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 35667899999999999987777666 2333357788776542 232 2111 111 1223334445
Q ss_pred HHHHHHHC---CCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHh
Q 016103 199 LTDFLEKL---PDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLY 274 (395)
Q Consensus 199 l~~~l~~l---~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (395)
|.++++.. +++ ++++|+|+|.||++|+.++.++|+.+.++|.+++..+.....
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~----------------------- 146 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL----------------------- 146 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC-----------------------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc-----------------------
Confidence 55555532 332 589999999999999999999999999999999875421100
Q ss_pred hcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHH
Q 016103 275 ANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQS 354 (395)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~ 354 (395)
.... ....++|++++||++|+++|.+..+.
T Consensus 147 -------------------------------------------~~~~-------~~~~~~pi~~~hG~~D~vvp~~~~~~ 176 (216)
T PF02230_consen 147 -------------------------------------------EDRP-------EALAKTPILIIHGDEDPVVPFEWAEK 176 (216)
T ss_dssp -------------------------------------------HCCH-------CCCCTS-EEEEEETT-SSSTHHHHHH
T ss_pred -------------------------------------------cccc-------cccCCCcEEEEecCCCCcccHHHHHH
Confidence 0000 00014899999999999999887766
Q ss_pred HHhhC----CCCeEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 355 MINSS----PPEKVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 355 l~~~l----~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
..+.+ .+.++..++++||.+.. +....+.+||++
T Consensus 177 ~~~~L~~~~~~v~~~~~~g~gH~i~~----~~~~~~~~~l~~ 214 (216)
T PF02230_consen 177 TAEFLKAAGANVEFHEYPGGGHEISP----EELRDLREFLEK 214 (216)
T ss_dssp HHHHHHCTT-GEEEEEETT-SSS--H----HHHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEEcCCCCCCCCH----HHHHHHHHHHhh
Confidence 55544 35789999999998753 444556666653
No 78
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.58 E-value=2.9e-13 Score=127.14 Aligned_cols=219 Identities=14% Similarity=0.156 Sum_probs=123.6
Q ss_pred CCCCeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH----CCCCCcE
Q 016103 139 LETNHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK----LPDAEKV 212 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~----l~~~~~v 212 (395)
...|.||++||+.+++. .-+.++..+.++||+|++++.||+|.+.-.....++ .-..+|+.+++++ ... .+.
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P~-a~l 200 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFT-AGWTEDLREVVNHIKKRYPQ-APL 200 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceee-cCCHHHHHHHHHHHHHhCCC-Cce
Confidence 45699999999955543 346788888889999999999999998765543332 2233344444444 344 489
Q ss_pred EEEEeChhHHHHHHHHHHCCC--CcceEEEEcccccCCCcchhHHhhhcCCchHHH-----HHHHHHH-------hhcCC
Q 016103 213 ILVGHDFGGACISYAMELFPF--KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLM-----RQAQIFL-------YANGN 278 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~ 278 (395)
..+|.||||++...+..+..+ .+.+.+.++.+.... ............... ..+...+ .....
T Consensus 201 ~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~---~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~v 277 (409)
T KOG1838|consen 201 FAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLL---AASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPV 277 (409)
T ss_pred EEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhh---hhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccc
Confidence 999999999999998887544 345555555443211 011111111111111 0111010 00000
Q ss_pred C-----CCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhh-hccccccCCccEEEEEcCCCCccCHHHH
Q 016103 279 N-----KPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKL-SLSDMKYGSVRRFYIETPEDNAIPIALQ 352 (395)
Q Consensus 279 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~PvliI~G~~D~~vp~~~~ 352 (395)
. ......+++.......+... +..+.+..- .......+++|+|+|++.+|+++|.+..
T Consensus 278 d~d~~~~~~SvreFD~~~t~~~~gf~----------------~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~i 341 (409)
T KOG1838|consen 278 DFDVILKSRSVREFDEALTRPMFGFK----------------SVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAI 341 (409)
T ss_pred hhhhhhhcCcHHHHHhhhhhhhcCCC----------------cHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccC
Confidence 0 00111111111111111111 111111111 1112345689999999999999998643
Q ss_pred -HHHHhhCCCCeEEEecCCCCCCcccC
Q 016103 353 -QSMINSSPPEKVFRLKGADHSPFFSK 378 (395)
Q Consensus 353 -~~l~~~l~~~~~~~i~~~GH~~~~e~ 378 (395)
.......|+.-+++-..+||..++|.
T Consensus 342 p~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 342 PIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred CHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 55566778888888899999999987
No 79
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.58 E-value=1.3e-14 Score=122.72 Aligned_cols=203 Identities=12% Similarity=0.146 Sum_probs=134.4
Q ss_pred CCCCCCeEEEEcCCCCChhhHHHHHHHH-HhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-CC-CCcEE
Q 016103 137 PDLETNHFVLVHGGGFGAWCWYKTIALL-EEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-PD-AEKVI 213 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~~~~~~~L-~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~-~~~v~ 213 (395)
.....|+++++||..++-...-.++..+ ..-+..|+.+++||+|.|...+.+ ..+...++.+.+.+..- .. +.+++
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE-~GL~lDs~avldyl~t~~~~dktkiv 152 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE-EGLKLDSEAVLDYLMTRPDLDKTKIV 152 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc-cceeccHHHHHHHHhcCccCCcceEE
Confidence 4568899999999999988887777654 344789999999999999876543 23444444444433322 11 24899
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHH
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLK 293 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (395)
|.|-|+||++|+.+|+.+.+++.++|+-+++..-+.. ..... ..-..+....+.+ +
T Consensus 153 lfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~-----~i~~v-~p~~~k~i~~lc~------------------k 208 (300)
T KOG4391|consen 153 LFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHM-----AIPLV-FPFPMKYIPLLCY------------------K 208 (300)
T ss_pred EEecccCCeeEEEeeccchhheeeeeeechhccchhh-----hhhee-ccchhhHHHHHHH------------------H
Confidence 9999999999999999999999999999886431100 00000 0000000000000 0
Q ss_pred HHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC--CeEEEecCCC
Q 016103 294 ELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP--EKVFRLKGAD 371 (395)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~--~~~~~i~~~G 371 (395)
..+. .. ..+ ...+.|.|+|.|..|.+||+.+.+.+.+.+|. .++.++|++.
T Consensus 209 n~~~------------------S~----~ki-----~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gt 261 (300)
T KOG4391|consen 209 NKWL------------------SY----RKI-----GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGT 261 (300)
T ss_pred hhhc------------------ch----hhh-----ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCc
Confidence 0000 00 000 12258999999999999999999999999874 4899999999
Q ss_pred CCCcccChHHHHHHHHHHhcC
Q 016103 372 HSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 372 H~~~~e~p~~v~~~I~~fl~~ 392 (395)
|.--+- -+-..++|.+||..
T Consensus 262 HNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 262 HNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred cCceEE-eccHHHHHHHHHHH
Confidence 974432 24567777877753
No 80
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.57 E-value=1.5e-13 Score=114.79 Aligned_cols=175 Identities=15% Similarity=0.100 Sum_probs=127.8
Q ss_pred CCCCCeEEEEcCC-----CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcE
Q 016103 138 DLETNHFVLVHGG-----GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKV 212 (395)
Q Consensus 138 ~~~~~~vv~~HG~-----~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v 212 (395)
....|..|++|.- ..+...-+.++..|.++||.++.+|+||.|.|....+....-.+.+..+.+++.....+.+.
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~ 104 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSAS 104 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchh
Confidence 3456788888854 33444678888999999999999999999999876655444444555566666666554343
Q ss_pred -EEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHH
Q 016103 213 -ILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSL 291 (395)
Q Consensus 213 -~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (395)
.|.|+|+|+++++.+|.+.|+ +...+.+.+..-. ..
T Consensus 105 ~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~------~d------------------------------------ 141 (210)
T COG2945 105 CWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA------YD------------------------------------ 141 (210)
T ss_pred hhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc------hh------------------------------------
Confidence 688999999999999999887 5555555544210 00
Q ss_pred HHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCC
Q 016103 292 LKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGAD 371 (395)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~G 371 (395)
+. . .....+|.++|+|+.|.+++.....++++. ...+++++++++
T Consensus 142 -------------------------fs-~--------l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~ 186 (210)
T COG2945 142 -------------------------FS-F--------LAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGAD 186 (210)
T ss_pred -------------------------hh-h--------ccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCC
Confidence 00 0 001137899999999999998888888877 456889999999
Q ss_pred CCCcccChHHHHHHHHHHhc
Q 016103 372 HSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 372 H~~~~e~p~~v~~~I~~fl~ 391 (395)
||++- +-..+.+.|.+||.
T Consensus 187 HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 187 HFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred ceecc-cHHHHHHHHHHHhh
Confidence 99764 66779999999984
No 81
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.56 E-value=1.5e-12 Score=115.51 Aligned_cols=242 Identities=13% Similarity=0.086 Sum_probs=157.7
Q ss_pred CCCeEEEEcCCCCChhh-HHHH-----HHHHHhCCCEEEEEcCCCCCCCCC--CCC-CccChhhhHHHHHHHHHHCCCCC
Q 016103 140 ETNHFVLVHGGGFGAWC-WYKT-----IALLEEGGFKVTAIDLTGAGIHSF--DTN-GITSLSQYVKPLTDFLEKLPDAE 210 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~-~~~~-----~~~L~~~G~~v~~~d~~G~G~s~~--~~~-~~~~~~~~~~~l~~~l~~l~~~~ 210 (395)
++|+||-.|.+|.+..+ |..+ +..+.++ |.|+-+|-||+-.... +.+ ...++++++++|..++++++++
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk- 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK- 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc-
Confidence 58899999999988875 7654 3467777 9999999999855432 222 3568999999999999999996
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCC-----chHHHHHHHHHHhhcCCCCCCc--
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTG-----STDLMRQAQIFLYANGNNKPPT-- 283 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-- 283 (395)
.|+-+|--.|++|...+|..||++|.+||||++.+...+ |.+++..... ...+......++....+.....
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~ 200 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN 200 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc
Confidence 999999999999999999999999999999998775444 3444332211 1122222223322222211111
Q ss_pred chhhhHHHHHHHhcCCCchHHHHHHhhh-cccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--
Q 016103 284 AIDLDKSLLKELLFNQSPAKDIALASVS-MRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP-- 360 (395)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~-- 360 (395)
..++... .+..+............... ....++........ ...+||+|++.|++.+.+. ....+...+.
T Consensus 201 ~~diVq~-Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~----~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~ 273 (326)
T KOG2931|consen 201 NSDIVQE-YRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLG----TTLKCPVLLVVGDNSPHVS--AVVECNSKLDPT 273 (326)
T ss_pred cHHHHHH-HHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcC----ccccccEEEEecCCCchhh--hhhhhhcccCcc
Confidence 1122222 22233333332333322222 22222222111111 0336999999999988663 3444555543
Q ss_pred CCeEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 361 PEKVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 361 ~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
+..+..+.++|-.+..++|..+++.+.=|+.-
T Consensus 274 ~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 274 YTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred cceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 56788889999999999999999999999863
No 82
>PRK10162 acetyl esterase; Provisional
Probab=99.56 E-value=4.2e-13 Score=126.64 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=75.2
Q ss_pred CCCeEEEEcCCC---CChhhHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC-CcEEE
Q 016103 140 ETNHFVLVHGGG---FGAWCWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA-EKVIL 214 (395)
Q Consensus 140 ~~~~vv~~HG~~---~~~~~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~l 214 (395)
..|+||++||.| ++...|..++..|+. .|+.|+.+|+|.......+. ...+..+.++.+.+..+.++++ ++++|
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~l 158 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDYGINMSRIGF 158 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHhCCChhHEEE
Confidence 468999999976 455678888888887 49999999999765432221 1112222333444444556653 58999
Q ss_pred EEeChhHHHHHHHHHHC------CCCcceEEEEccccc
Q 016103 215 VGHDFGGACISYAMELF------PFKISKAVFIAAAML 246 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~------p~~V~~lVli~~~~~ 246 (395)
+|+|+||.+|+.++... +.++.++|++.+...
T Consensus 159 ~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 159 AGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999988753 357899999988653
No 83
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.55 E-value=4.4e-14 Score=136.18 Aligned_cols=107 Identities=21% Similarity=0.283 Sum_probs=83.2
Q ss_pred CCCCCeEEEEcCCCCCh--hhHHH-HHHHHHh--CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC------
Q 016103 138 DLETNHFVLVHGGGFGA--WCWYK-TIALLEE--GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL------ 206 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~L~~--~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l------ 206 (395)
+..+|++|++|||+.+. ..|.. ++..|.. ..|+||++|++|+|.+..+... .....+++++.++++.+
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 45679999999998654 45765 6666542 2599999999999988654332 33456666777777654
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 207 PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 207 ~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+++ +++||||||||++|..++.++|++|.++++++|+.+
T Consensus 117 ~l~-~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWD-NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCC-cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 354 999999999999999999999999999999999754
No 84
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.53 E-value=2.9e-13 Score=121.88 Aligned_cols=235 Identities=12% Similarity=0.112 Sum_probs=131.3
Q ss_pred CCCeEEEEcCCCCChhh-HHHHH-----HHHHhCCCEEEEEcCCCCCCCCCC--CC-CccChhhhHHHHHHHHHHCCCCC
Q 016103 140 ETNHFVLVHGGGFGAWC-WYKTI-----ALLEEGGFKVTAIDLTGAGIHSFD--TN-GITSLSQYVKPLTDFLEKLPDAE 210 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~-~~~~~-----~~L~~~G~~v~~~d~~G~G~s~~~--~~-~~~~~~~~~~~l~~~l~~l~~~~ 210 (395)
++|+||-.|-.|.+... |..+. +.+.++ |.|+-+|.||+..-... .. ...++++++++|..++++++++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk- 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK- 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc-
Confidence 58999999999998875 76654 456665 99999999999765432 22 3468999999999999999996
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCC--------chHH-HHHHHHHHhhcCCCCC
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTG--------STDL-MRQAQIFLYANGNNKP 281 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~ 281 (395)
.|+-+|--.|++|...+|..+|++|.+|||+++.....+ +.+++..... .... ...+....+......
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g--w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~- 176 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG--WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEE- 176 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHH-
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc--HHHHHHHHHhcccccccccccchHHhhhhccccccccc-
Confidence 999999999999999999999999999999999875444 3333322111 1111 111111111000000
Q ss_pred CcchhhhHHHHHHHhcCCCchHHHHHH-hhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC
Q 016103 282 PTAIDLDKSLLKELLFNQSPAKDIALA-SVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP 360 (395)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~ 360 (395)
...++ ...++..+.....+...... .......++.... ....||+|+|.|+..+.+ +....+..++.
T Consensus 177 -~n~Dl-v~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~--------~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ld 244 (283)
T PF03096_consen 177 -NNSDL-VQTYRQHLDERINPKNLALFLNSYNSRTDLSIER--------PSLGCPVLLVVGDNSPHV--DDVVEMNSKLD 244 (283)
T ss_dssp -CT-HH-HHHHHHHHHT-TTHHHHHHHHHHHHT-----SEC--------TTCCS-EEEEEETTSTTH--HHHHHHHHHS-
T ss_pred -ccHHH-HHHHHHHHhcCCCHHHHHHHHHHHhccccchhhc--------CCCCCCeEEEEecCCcch--hhHHHHHhhcC
Confidence 00111 11122222222222222222 1112222222111 223599999999998865 44456666663
Q ss_pred --CCeEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 361 --PEKVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 361 --~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
..++..+++||=.+..|+|+.+++.+.=||+
T Consensus 245 p~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 245 PTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred cccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 4588999999999999999999999999986
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.53 E-value=1.4e-13 Score=122.81 Aligned_cols=179 Identities=17% Similarity=0.044 Sum_probs=112.0
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCC-CCCCCCC-cc--------ChhhhHHHHHHHHHHC--
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGI-HSFDTNG-IT--------SLSQYVKPLTDFLEKL-- 206 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~-s~~~~~~-~~--------~~~~~~~~l~~~l~~l-- 206 (395)
++.|.||++|++.+-....+.+++.|+++||.|++||+-+-.. ....... .. ..+...+++...++.+
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 4578999999997766777889999999999999999864433 1111100 00 1234455665555554
Q ss_pred -C-C-CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCc
Q 016103 207 -P-D-AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPT 283 (395)
Q Consensus 207 -~-~-~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (395)
. . .++|.++|+||||.+++.++... ..+++.|..-+.....
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~----------------------------------- 135 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPP----------------------------------- 135 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGG-----------------------------------
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCC-----------------------------------
Confidence 3 1 14999999999999999999876 5689888877610000
Q ss_pred chhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC----
Q 016103 284 AIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS---- 359 (395)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l---- 359 (395)
..... ...+++|+++++|++|+.++.+..+.+.+.+
T Consensus 136 --------------------------------~~~~~--------~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 175 (218)
T PF01738_consen 136 --------------------------------PPLED--------APKIKAPVLILFGENDPFFPPEEVEALEEALKAAG 175 (218)
T ss_dssp --------------------------------GHHHH--------GGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTT
T ss_pred --------------------------------cchhh--------hcccCCCEeecCccCCCCCChHHHHHHHHHHHhcC
Confidence 00000 1123699999999999999988766555444
Q ss_pred CCCeEEEecCCCCCCcccCh--------HHHHHHHHHHhcCC
Q 016103 360 PPEKVFRLKGADHSPFFSKP--------QALHKLLVEISKLP 393 (395)
Q Consensus 360 ~~~~~~~i~~~GH~~~~e~p--------~~v~~~I~~fl~~~ 393 (395)
...++++++|++|.++.... ++-.+.+.+||+++
T Consensus 176 ~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 176 VDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 56799999999998776532 23456778888764
No 86
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.52 E-value=1.8e-13 Score=116.66 Aligned_cols=155 Identities=20% Similarity=0.247 Sum_probs=103.2
Q ss_pred EEEEcCCCCCh-hhHHHHHH-HHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 144 FVLVHGGGFGA-WCWYKTIA-LLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 144 vv~~HG~~~~~-~~~~~~~~-~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
|+++||++++. ..|..+.+ .|... ++|..+|+ ...+.+++...+.+.+.... ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 78999997665 57877655 56665 77877776 12467888888888888654 589999999999
Q ss_pred HHHHHHH-HHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCC
Q 016103 222 ACISYAM-ELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQS 300 (395)
Q Consensus 222 ~~a~~~a-~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (395)
.+++.++ .....+|.+++|++++-..........+
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~~~~~-------------------------------------------- 102 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPDDPEPFPPEL-------------------------------------------- 102 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCGCHHCCTCGG--------------------------------------------
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcccccchhhhc--------------------------------------------
Confidence 9999999 7778899999999997532000000000
Q ss_pred chHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccC
Q 016103 301 PAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSK 378 (395)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~ 378 (395)
......+ ... ..+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 103 ------------~~f~~~p-~~~--------l~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 103 ------------DGFTPLP-RDP--------LPFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASG 158 (171)
T ss_dssp ------------CCCTTSH-CCH--------HHCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGT
T ss_pred ------------cccccCc-ccc--------cCCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccC
Confidence 0000000 001 1367799999999999999999999998 889999999999977654
No 87
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.52 E-value=7.4e-13 Score=119.01 Aligned_cols=221 Identities=15% Similarity=0.154 Sum_probs=133.7
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
++|+|+|+.+++...|..+++.|...++.|+.++++|.+... ....+++++++...+.|.....+.+++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~---~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE---PPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS---HEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC---CCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 479999999999999999999999855899999999998332 23468999999888888776554599999999999
Q ss_pred HHHHHHHHHC---CCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcC
Q 016103 222 ACISYAMELF---PFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFN 298 (395)
Q Consensus 222 ~~a~~~a~~~---p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (395)
.+|+++|.+. -..|..+++++++.+........... ........+...... +.........+...+..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 148 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREP---SDEQFIEELRRIGGT------PDASLEDEELLARLLRA 148 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHC---HHHHHHHHHHHHCHH------HHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhh---hHHHHHHHHHHhcCC------chhhhcCHHHHHHHHHH
Confidence 9999999863 34599999999865432111100000 000011111100000 00000000001100000
Q ss_pred CCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHH---HHHHHHhhCCC-CeEEEecCCCCCC
Q 016103 299 QSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIA---LQQSMINSSPP-EKVFRLKGADHSP 374 (395)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~---~~~~l~~~l~~-~~~~~i~~~GH~~ 374 (395)
. ..... ..............+|.++.....|...... ....+.+...+ .+++.++| +|+.
T Consensus 149 -~-~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~ 212 (229)
T PF00975_consen 149 -L-RDDFQ-------------ALENYSIRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFS 212 (229)
T ss_dssp -H-HHHHH-------------HHHTCS-TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTG
T ss_pred -H-HHHHH-------------HHhhccCCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcE
Confidence 0 00000 0000000000001467889999999988766 34446666654 47888885 9999
Q ss_pred ccc-ChHHHHHHHHHHh
Q 016103 375 FFS-KPQALHKLLVEIS 390 (395)
Q Consensus 375 ~~e-~p~~v~~~I~~fl 390 (395)
++. +..++++.|.++|
T Consensus 213 ~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 213 MLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHSTTHHHHHHHHHHHH
T ss_pred ecchHHHHHHHHHhccC
Confidence 987 6788999998875
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.48 E-value=1.3e-12 Score=123.60 Aligned_cols=214 Identities=16% Similarity=0.132 Sum_probs=116.5
Q ss_pred CCCCCeEEEEcCCCCChhhHH-HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC-C-CcEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWY-KTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD-A-EKVIL 214 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~-~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~-~-~~v~l 214 (395)
..+.|+||++-|+-+-...+. .+.+.|..+|+.++++|.||.|.|...+-. .+.+.+...|.+.|..... + .+|.+
T Consensus 187 ~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~~RV~~ 265 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDHTRVGA 265 (411)
T ss_dssp SS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEEEEEEE
T ss_pred CCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccChhheEE
Confidence 444577888888877666654 455679999999999999999998643322 2335566677777766532 1 49999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
+|.|+||++|+.+|..+++||+++|.++++... ++............. ...+..
T Consensus 266 ~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~----~ft~~~~~~~~P~my----------------------~d~LA~ 319 (411)
T PF06500_consen 266 WGFSFGGYYAVRLAALEDPRLKAVVALGAPVHH----FFTDPEWQQRVPDMY----------------------LDVLAS 319 (411)
T ss_dssp EEETHHHHHHHHHHHHTTTT-SEEEEES---SC----GGH-HHHHTTS-HHH----------------------HHHHHH
T ss_pred EEeccchHHHHHHHHhcccceeeEeeeCchHhh----hhccHHHHhcCCHHH----------------------HHHHHH
Confidence 999999999999999999999999999997521 111111101111111 111111
Q ss_pred HhcCCCchH-HHHHHh--hhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCC
Q 016103 295 LLFNQSPAK-DIALAS--VSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGAD 371 (395)
Q Consensus 295 ~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~G 371 (395)
.+....... ...... ..+.... ++ ......+|+|.|.|++|+++|.+..+-++..-.+.+...++...
T Consensus 320 rlG~~~~~~~~l~~el~~~SLk~qG---lL------~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~ 390 (411)
T PF06500_consen 320 RLGMAAVSDESLRGELNKFSLKTQG---LL------SGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKP 390 (411)
T ss_dssp HCT-SCE-HHHHHHHGGGGSTTTTT---TT------TSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSS
T ss_pred HhCCccCCHHHHHHHHHhcCcchhc---cc------cCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCc
Confidence 111111111 111111 1111111 11 01234689999999999999999999999887778888888544
Q ss_pred -CCCcccChHHHHHHHHHHhc
Q 016103 372 -HSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 372 -H~~~~e~p~~v~~~I~~fl~ 391 (395)
|..+ +.-...+.+||+
T Consensus 391 ~~~gy----~~al~~~~~Wl~ 407 (411)
T PF06500_consen 391 LHMGY----PQALDEIYKWLE 407 (411)
T ss_dssp HHHHH----HHHHHHHHHHHH
T ss_pred cccch----HHHHHHHHHHHH
Confidence 3332 244455556654
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.48 E-value=1.5e-13 Score=126.72 Aligned_cols=107 Identities=18% Similarity=0.261 Sum_probs=78.9
Q ss_pred CCCCCeEEEEcCCCCCh-hhHHH-HHHHH-HhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC------CC
Q 016103 138 DLETNHFVLVHGGGFGA-WCWYK-TIALL-EEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL------PD 208 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~-~~~~~-~~~~L-~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l------~~ 208 (395)
..++|++|++|||+++. ..|.. +...| ...+|+|+++|++|++....+ ....+....++++..+++.+ +.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 45678999999998887 67755 44444 445799999999987433211 12234444455555555543 34
Q ss_pred CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 209 AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 209 ~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++++||||||||++|..++.++|++|.++|+++|..+
T Consensus 112 -~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 112 -ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred -HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 4999999999999999999999999999999998754
No 90
>COG0400 Predicted esterase [General function prediction only]
Probab=99.47 E-value=9.5e-13 Score=114.85 Aligned_cols=173 Identities=15% Similarity=0.107 Sum_probs=117.9
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC--CCC---CCCCCCccC-------hhhhHHHHHHHHHH
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA--GIH---SFDTNGITS-------LSQYVKPLTDFLEK 205 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~--G~s---~~~~~~~~~-------~~~~~~~l~~~l~~ 205 (395)
.+..|+||++||+|++...+-++...+..+ +.++.+.-+=. |.- .......++ .+.+++.|..+.+.
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 445678999999999999998877776665 66665542210 000 000011122 33344555566666
Q ss_pred CCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcc
Q 016103 206 LPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTA 284 (395)
Q Consensus 206 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
.+++ ++++++|+|-||++++.+..++|+.++++|++++..+.....
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------------
Confidence 6763 599999999999999999999999999999999976533210
Q ss_pred hhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC----C
Q 016103 285 IDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS----P 360 (395)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l----~ 360 (395)
.......|+++++|+.|++||.....++.+.+ -
T Consensus 141 -------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~ 177 (207)
T COG0400 141 -------------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGA 177 (207)
T ss_pred -------------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC
Confidence 00012589999999999999988876666544 3
Q ss_pred CCeEEEecCCCCCCcccChHHHHHHHHH
Q 016103 361 PEKVFRLKGADHSPFFSKPQALHKLLVE 388 (395)
Q Consensus 361 ~~~~~~i~~~GH~~~~e~p~~v~~~I~~ 388 (395)
++++.+++ .||.+..+.-+.+.+.|.+
T Consensus 178 ~v~~~~~~-~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 178 DVEVRWHE-GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred CEEEEEec-CCCcCCHHHHHHHHHHHHh
Confidence 56888888 7999876655555444433
No 91
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.44 E-value=1.7e-11 Score=105.64 Aligned_cols=182 Identities=17% Similarity=0.249 Sum_probs=113.6
Q ss_pred EEEEcCCCCChhhHH--HHHHHHHhCC--CEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 144 FVLVHGGGFGAWCWY--KTIALLEEGG--FKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 144 vv~~HG~~~~~~~~~--~~~~~L~~~G--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
|+++||+.+++.+.. .+.+.+++++ ..++++|++ ....+..+.+.++++....+ .+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-NVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-CeEEEEECh
Confidence 799999999887764 4566777764 456666664 45777788899999998775 799999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCC
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQ 299 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (395)
||+.|..+|.+++ +.. |+++|...+.. .+ ..++.............+....+..
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~~-----~l-------------~~~iG~~~~~~~~e~~~~~~~~~~~----- 122 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPYE-----LL-------------QDYIGEQTNPYTGESYELTEEHIEE----- 122 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHHH-----HH-------------HHhhCccccCCCCccceechHhhhh-----
Confidence 9999999999986 434 99998764211 00 0111000000000000000000000
Q ss_pred CchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccCh
Q 016103 300 SPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKP 379 (395)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p 379 (395)
+..+.... .....+++++.++.|.+++.+.+ .+...++..++.+|++|-+ ++-
T Consensus 123 ---------------------l~~l~~~~-~~~~~~~lvll~~~DEvLd~~~a---~~~~~~~~~~i~~ggdH~f--~~f 175 (187)
T PF05728_consen 123 ---------------------LKALEVPY-PTNPERYLVLLQTGDEVLDYREA---VAKYRGCAQIIEEGGDHSF--QDF 175 (187)
T ss_pred ---------------------cceEeccc-cCCCccEEEEEecCCcccCHHHH---HHHhcCceEEEEeCCCCCC--ccH
Confidence 00000000 11247899999999999998544 3334456666778889974 456
Q ss_pred HHHHHHHHHHhc
Q 016103 380 QALHKLLVEISK 391 (395)
Q Consensus 380 ~~v~~~I~~fl~ 391 (395)
++....|.+|+.
T Consensus 176 ~~~l~~i~~f~~ 187 (187)
T PF05728_consen 176 EEYLPQIIAFLQ 187 (187)
T ss_pred HHHHHHHHHhhC
Confidence 778888888863
No 92
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.42 E-value=3.1e-11 Score=115.38 Aligned_cols=245 Identities=11% Similarity=0.127 Sum_probs=147.4
Q ss_pred CeEEEEcCCCCChhhH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChh
Q 016103 142 NHFVLVHGGGFGAWCW-YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFG 220 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~-~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 220 (395)
|+||++..+.+..... +.+++.|.. |+.|+..||.--+.... .....+++++++.|.++++++|. +++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~-~~~~f~ldDYi~~l~~~i~~~G~--~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPL-SAGKFDLEDYIDYLIEFIRFLGP--DIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCch-hcCCCCHHHHHHHHHHHHHHhCC--CCcEEEEchh
Confidence 7999999987666544 678899999 99999999976553321 12457899999999999999985 4999999999
Q ss_pred HHHHHHHHHHC-----CCCcceEEEEcccccCCCc-chhHHhhhcCCchHHHHHH--------------------HHHHh
Q 016103 221 GACISYAMELF-----PFKISKAVFIAAAMLTNGQ-NLLDMFSQQTGSTDLMRQA--------------------QIFLY 274 (395)
Q Consensus 221 g~~a~~~a~~~-----p~~V~~lVli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 274 (395)
|..++.+++.. |.+++.+++++++...... .....+........+.+.. ....+
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F 258 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGF 258 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHH
Confidence 99987766654 6679999999998876542 3333322211111111100 00000
Q ss_pred hcCCCCCCcchhhhHHHHHHHhcCCCchH-HHH-HHhhhcccCC-----ChhhHhhhhc---------------cccccC
Q 016103 275 ANGNNKPPTAIDLDKSLLKELLFNQSPAK-DIA-LASVSMRHIP-----FAPVLEKLSL---------------SDMKYG 332 (395)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~-----~~~~~~~~~~---------------~~~~~~ 332 (395)
... .+........+++..+........ +.. .........+ +.+.++.+.. -.+..+
T Consensus 259 ~~m--np~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 259 ISM--NLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAI 336 (406)
T ss_pred HHc--CcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHC
Confidence 000 011111112222222221121111 111 1110011111 1111111111 123456
Q ss_pred C-ccEEEEEcCCCCccCHHHHHHHHhhC---CC--CeEEEecCCCCCCcccC---hHHHHHHHHHHhcC
Q 016103 333 S-VRRFYIETPEDNAIPIALQQSMINSS---PP--EKVFRLKGADHSPFFSK---PQALHKLLVEISKL 392 (395)
Q Consensus 333 ~-~PvliI~G~~D~~vp~~~~~~l~~~l---~~--~~~~~i~~~GH~~~~e~---p~~v~~~I~~fl~~ 392 (395)
+ +|+|.|.|+.|.++|+.....+.+.+ +. .+.+..+++||+..+.- .+++...|.+||.+
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 7 99999999999999999988888864 43 34667778999987764 46788999999875
No 93
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.42 E-value=1e-11 Score=122.07 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=85.9
Q ss_pred CCCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCC
Q 016103 140 ETNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAE 210 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~ 210 (395)
...|||+++.+......| ..++++|.++||.|+++|+++-+... ...++++|++.|.+.++.. |..
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~- 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSR- 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCC-
Confidence 357999999998777777 67999999999999999999866553 3367888887777777664 554
Q ss_pred cEEEEEeChhHHHHHH----HHHHCCC-CcceEEEEcccccCC
Q 016103 211 KVILVGHDFGGACISY----AMELFPF-KISKAVFIAAAMLTN 248 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~----~a~~~p~-~V~~lVli~~~~~~~ 248 (395)
++.++|||+||.+++. +++++++ +|+.++++.++....
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999999886 7788886 899999999987654
No 94
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.41 E-value=1.4e-11 Score=112.92 Aligned_cols=108 Identities=19% Similarity=0.318 Sum_probs=91.7
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhC---CCEEEEEcCCCCCCCCCC-----CCCccChhhhHHHHHHHHHHCC-----
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEG---GFKVTAIDLTGAGIHSFD-----TNGITSLSQYVKPLTDFLEKLP----- 207 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~---G~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~~l~~~l~~l~----- 207 (395)
+..|||++|.++-...|..+.+.|.+. .|.|+++.+.||-.++.. ....++++++++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999888744 699999999999877654 3467899999998887777652
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHCC---CCcceEEEEcccccCC
Q 016103 208 DAEKVILVGHDFGGACISYAMELFP---FKISKAVFIAAAMLTN 248 (395)
Q Consensus 208 ~~~~v~lvGhS~Gg~~a~~~a~~~p---~~V~~lVli~~~~~~~ 248 (395)
.+.+++|+|||.|++++++++.+++ .+|.+++++-|....-
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 3468999999999999999999999 7899999999986543
No 95
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.41 E-value=1.3e-11 Score=115.65 Aligned_cols=214 Identities=14% Similarity=0.132 Sum_probs=112.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------------CCccC------hhhhHHH
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT-------------NGITS------LSQYVKP 198 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~-------------~~~~~------~~~~~~~ 198 (395)
.+.-|.||.+||.+.....|...+. ++..||.|+.+|.+|.|...... .+..+ ...+..|
T Consensus 80 ~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D 158 (320)
T PF05448_consen 80 KGKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLD 158 (320)
T ss_dssp SSSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHH
T ss_pred CCCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHH
Confidence 3455799999999999888876554 67779999999999999332110 00111 1223345
Q ss_pred HHHHHHHC----CCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHH
Q 016103 199 LTDFLEKL----PDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFL 273 (395)
Q Consensus 199 l~~~l~~l----~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (395)
....++.+ .++ +++.+.|.|+||.+++.+|+..| +|++++...|+....... +..-........+ ..++
T Consensus 159 ~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~-~~~~~~~~~y~~~----~~~~ 232 (320)
T PF05448_consen 159 AVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRA-LELRADEGPYPEI----RRYF 232 (320)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHH-HHHT--STTTHHH----HHHH
T ss_pred HHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhh-hhcCCccccHHHH----HHHH
Confidence 44444443 111 48999999999999999999876 599999998865321100 0000000111111 1111
Q ss_pred hhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHH
Q 016103 274 YANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQ 353 (395)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~ 353 (395)
... ............ .+.-.+...+ ...+++|+++-.|-.|.+||+..+-
T Consensus 233 ~~~--------------------d~~~~~~~~v~~--~L~Y~D~~nf--------A~ri~~pvl~~~gl~D~~cPP~t~f 282 (320)
T PF05448_consen 233 RWR--------------------DPHHEREPEVFE--TLSYFDAVNF--------ARRIKCPVLFSVGLQDPVCPPSTQF 282 (320)
T ss_dssp HHH--------------------SCTHCHHHHHHH--HHHTT-HHHH--------GGG--SEEEEEEETT-SSS-HHHHH
T ss_pred hcc--------------------CCCcccHHHHHH--HHhhhhHHHH--------HHHcCCCEEEEEecCCCCCCchhHH
Confidence 000 000000000000 0011122222 2345799999999999999999999
Q ss_pred HHHhhCC-CCeEEEecCCCCCCcccChHHH-HHHHHHHhcC
Q 016103 354 SMINSSP-PEKVFRLKGADHSPFFSKPQAL-HKLLVEISKL 392 (395)
Q Consensus 354 ~l~~~l~-~~~~~~i~~~GH~~~~e~p~~v-~~~I~~fl~~ 392 (395)
.+.+.++ ..++.+++..||...- ++ .+...+||.+
T Consensus 283 A~yN~i~~~K~l~vyp~~~He~~~----~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 283 AAYNAIPGPKELVVYPEYGHEYGP----EFQEDKQLNFLKE 319 (320)
T ss_dssp HHHCC--SSEEEEEETT--SSTTH----HHHHHHHHHHHHH
T ss_pred HHHhccCCCeeEEeccCcCCCchh----hHHHHHHHHHHhc
Confidence 9999887 4589999999997543 33 5666666654
No 96
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.37 E-value=2.7e-11 Score=122.91 Aligned_cols=105 Identities=14% Similarity=0.031 Sum_probs=82.3
Q ss_pred CCCCeEEEEcCCCCChh---hH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC----CC
Q 016103 139 LETNHFVLVHGGGFGAW---CW-YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD----AE 210 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~---~~-~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~----~~ 210 (395)
...|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|...... .+ ...++|+.++++++.. +.
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~ 97 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDG 97 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCC
Confidence 35689999999987653 22 2355678889999999999999999864322 22 5566777777776521 24
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+|.++|||+||.+++.+|..+|++++++|..++..
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 99999999999999999999999999999988764
No 97
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.34 E-value=1.2e-12 Score=120.96 Aligned_cols=254 Identities=18% Similarity=0.114 Sum_probs=142.3
Q ss_pred CCccccccccccCCCCCC-CCCCCCCCccccccccCCccCCCccccccccccCCCCCCCeEEEEcCCCCChhhHHHHHHH
Q 016103 85 LPFDRSASLRYPNGSSSK-KTQLPRSSSSRARSLTDPLLQPHQLLNLNRDEKLPDLETNHFVLVHGGGFGAWCWYKTIAL 163 (395)
Q Consensus 85 ~~f~~~~~~r~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~ 163 (395)
..|...++++.|+..++. ...+...+..|.+........++.... .......|.||+.||.|.....|..++++
T Consensus 19 ~~~~~~~~~~~pg~~g~~~~~~i~~~~~~r~~~~~v~~~~p~~~~~-----~~~~~~~PlvvlshG~Gs~~~~f~~~A~~ 93 (365)
T COG4188 19 ANLLADADLRQPGPEGVALFVTITLNDPQRDRERPVDLRLPQGGTG-----TVALYLLPLVVLSHGSGSYVTGFAWLAEH 93 (365)
T ss_pred cccccChhhhcccccCcceEEEEeccCcccCCccccceeccCCCcc-----ccccCcCCeEEecCCCCCCccchhhhHHH
Confidence 456777778888775555 445555555666666555555543221 12335679999999999999999999999
Q ss_pred HHhCCCEEEEEcCCCCCCCCCCCC--Cc--cC---hhhhHHHHHHHHHH-------------CCCCCcEEEEEeChhHHH
Q 016103 164 LEEGGFKVTAIDLTGAGIHSFDTN--GI--TS---LSQYVKPLTDFLEK-------------LPDAEKVILVGHDFGGAC 223 (395)
Q Consensus 164 L~~~G~~v~~~d~~G~G~s~~~~~--~~--~~---~~~~~~~l~~~l~~-------------l~~~~~v~lvGhS~Gg~~ 223 (395)
|++.||.|.++|+||...-..+.. .. +. +.+...|+..+|+. ++. .+|.++|||+||+.
T Consensus 94 lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~-~~Vgv~GhS~GG~T 172 (365)
T COG4188 94 LASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDP-QRVGVLGHSFGGYT 172 (365)
T ss_pred HhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCc-cceEEEecccccHH
Confidence 999999999999999543322111 10 11 12223333333333 233 38999999999999
Q ss_pred HHHHHHHCCCCcceEEE------EcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhc
Q 016103 224 ISYAMELFPFKISKAVF------IAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLF 297 (395)
Q Consensus 224 a~~~a~~~p~~V~~lVl------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (395)
+++++....+-...+.- ++............. ....... ...+.+
T Consensus 173 ~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~~~l~q-------------------~~av~~~----------~~~~~~ 223 (365)
T COG4188 173 AMELAGAELDAEALLQHCESASRICLDPPGLNGRLLNQ-------------------CAAVWLP----------RQAYDL 223 (365)
T ss_pred HHHhccccccHHHHHHHhhhhhhcccCCCCcChhhhcc-------------------ccccccc----------hhhhcc
Confidence 99998755431111000 001000000000000 0000000 000000
Q ss_pred CCCchHHHHHHhhhcccCCChhhHhhh-hccccccCCccEEEEEcCCCCccCHH-HHHHHHhhCCCC--eEEEecCCCCC
Q 016103 298 NQSPAKDIALASVSMRHIPFAPVLEKL-SLSDMKYGSVRRFYIETPEDNAIPIA-LQQSMINSSPPE--KVFRLKGADHS 373 (395)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~PvliI~G~~D~~vp~~-~~~~l~~~l~~~--~~~~i~~~GH~ 373 (395)
.+.. ....... .+.+... ......++++|++++.|..|.+.|.. .+......+++. -+..++++.|+
T Consensus 224 rDpr----iravvA~-----~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~ 294 (365)
T COG4188 224 RDPR----IRAVVAI-----NPALGMIFGTTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHF 294 (365)
T ss_pred cccc----ceeeeec-----cCCcccccccccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccc
Confidence 0000 0000000 0000000 01224456799999999999987754 455666777776 67889999999
Q ss_pred CcccChHHH
Q 016103 374 PFFSKPQAL 382 (395)
Q Consensus 374 ~~~e~p~~v 382 (395)
-+++-.++.
T Consensus 295 sfl~~~~~~ 303 (365)
T COG4188 295 SFLELCKEG 303 (365)
T ss_pred cccccCccc
Confidence 999877663
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.33 E-value=4.8e-11 Score=108.64 Aligned_cols=234 Identities=17% Similarity=0.175 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCCCChh---hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC--------CC
Q 016103 140 ETNHFVLVHGGGFGAW---CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL--------PD 208 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~---~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l--------~~ 208 (395)
....||||.|++.+.. ....+++.|.+.||.|+-+-+.- +...-+..+++..+++|.++++++ +.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsS----Sy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSS----SYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GG----GBTTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecC----ccCCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 4568999999987664 46789999988899999998752 111122346788888877777754 23
Q ss_pred CCcEEEEEeChhHHHHHHHHHHCC-----CCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCC-CCC
Q 016103 209 AEKVILVGHDFGGACISYAMELFP-----FKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNN-KPP 282 (395)
Q Consensus 209 ~~~v~lvGhS~Gg~~a~~~a~~~p-----~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 282 (395)
++|+|+|||.|+.-+++++.... ..|.++||-+|........... ............+...+...... ..+
T Consensus 108 -~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~--~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 108 -EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFL--GEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp -S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSH--HH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred -ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcc--cchHHHHHHHHHHHHHHHcCCCCceee
Confidence 49999999999999999988642 5699999999976543322111 11123334444444443221111 000
Q ss_pred c-c-------hhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHH-H
Q 016103 283 T-A-------IDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQ-Q 353 (395)
Q Consensus 283 ~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~-~ 353 (395)
. . ..+....+..+.... ..++ +....+....+...+ ..++.|+|++.+.+|..||...- +
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~-gdDD--~FSSDL~de~l~~tf--------G~v~~plLvl~Sg~DEyvP~~vdk~ 253 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPG-GDDD--YFSSDLSDERLKKTF--------GKVSKPLLVLYSGKDEYVPPWVDKE 253 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SS-HHHH--THHHHHTT-HHHHTG--------GG--S-EEEEEE--TT---------
T ss_pred ccccccccCCCcccHHHHHhccCCC-Cccc--ccCCCCCHHHHHHHh--------ccCCCceEEEecCCCceeccccccc
Confidence 0 0 001111111111111 1111 111111111222222 23457999999999999986542 2
Q ss_pred HHHhh----CCC----CeEEEecCCCCCCcccChH----HHHHHHHHHhc
Q 016103 354 SMINS----SPP----EKVFRLKGADHSPFFSKPQ----ALHKLLVEISK 391 (395)
Q Consensus 354 ~l~~~----l~~----~~~~~i~~~GH~~~~e~p~----~v~~~I~~fl~ 391 (395)
.+.++ .+. ..--+|||++|.+--+..+ .+.+.+..||+
T Consensus 254 ~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 254 ALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 23332 221 1245899999987654432 47777778874
No 99
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.32 E-value=3.3e-11 Score=110.13 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=92.2
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhC---C------CEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCc
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEG---G------FKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEK 211 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~---G------~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 211 (395)
-.|++++|||+++-+.|..++..|... | |.||+|.+||+|.|+.+.....+..+.|.-+..++-.+|.+ +
T Consensus 152 v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~n-k 230 (469)
T KOG2565|consen 152 VKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYN-K 230 (469)
T ss_pred ccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcc-e
Confidence 348999999999999999999999754 3 78999999999999998888889999999999999999997 9
Q ss_pred EEEEEeChhHHHHHHHHHHCCCCcceEEEEcc
Q 016103 212 VILVGHDFGGACISYAMELFPFKISKAVFIAA 243 (395)
Q Consensus 212 v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~ 243 (395)
+.|-|-.||..|+..+|..+|++|.++-+-.+
T Consensus 231 ffiqGgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 231 FFIQGGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred eEeecCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 99999999999999999999999988765433
No 100
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.32 E-value=9.4e-11 Score=105.41 Aligned_cols=174 Identities=18% Similarity=0.154 Sum_probs=124.7
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-C----------ccChhhhHHHHHHHHHHCC---
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-G----------ITSLSQYVKPLTDFLEKLP--- 207 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~----------~~~~~~~~~~l~~~l~~l~--- 207 (395)
|.||++|++.+-....+.+++.|+..||.|+++|+-+......... . ..+..+...|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 8999999998888899999999999999999999976432211111 0 1222556667777777662
Q ss_pred --CCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcch
Q 016103 208 --DAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAI 285 (395)
Q Consensus 208 --~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (395)
..++|.++|+||||.+++.++...| .|++.|..-+........
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~---------------------------------- 152 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA---------------------------------- 152 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc----------------------------------
Confidence 1248999999999999999999887 588888877654311100
Q ss_pred hhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC----C
Q 016103 286 DLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP----P 361 (395)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~----~ 361 (395)
....+++|+|+++|+.|..+|......+.+.+. .
T Consensus 153 ------------------------------------------~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~ 190 (236)
T COG0412 153 ------------------------------------------DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVK 190 (236)
T ss_pred ------------------------------------------ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCC
Confidence 011236999999999999999887766665542 5
Q ss_pred CeEEEecCCCCCCcccC----h-------HHHHHHHHHHhcC
Q 016103 362 EKVFRLKGADHSPFFSK----P-------QALHKLLVEISKL 392 (395)
Q Consensus 362 ~~~~~i~~~GH~~~~e~----p-------~~v~~~I~~fl~~ 392 (395)
.++.+++++.|.++-+. + +.-.+.+.+|+++
T Consensus 191 ~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 191 VDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred eeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 67899999889877442 1 2344556666654
No 101
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.30 E-value=1.1e-10 Score=130.52 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=89.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+.+++++|+||++++...|..++..|... +.|+++|.+|++... ...++++++++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 34578999999999999999999999874 999999999998653 23479999999999999887654589999999
Q ss_pred hhHHHHHHHHHH---CCCCcceEEEEcccc
Q 016103 219 FGGACISYAMEL---FPFKISKAVFIAAAM 245 (395)
Q Consensus 219 ~Gg~~a~~~a~~---~p~~V~~lVli~~~~ 245 (395)
|||.+|.++|.+ .++++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999986 578899999998754
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.30 E-value=2e-11 Score=124.89 Aligned_cols=90 Identities=23% Similarity=0.199 Sum_probs=76.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCC---------CCC-------------ccChhhhHHH
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFD---------TNG-------------ITSLSQYVKP 198 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~---------~~~-------------~~~~~~~~~~ 198 (395)
.|+|||+||++++...|..+++.|.++||+|+++|+||||.+... ... ..++++.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 479999999999999999999999988999999999999999443 111 1267888899
Q ss_pred HHHHHHHCC--------------C-CCcEEEEEeChhHHHHHHHHHH
Q 016103 199 LTDFLEKLP--------------D-AEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 199 l~~~l~~l~--------------~-~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+..+...++ . ..+++++||||||.+++.++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888776 1 1489999999999999999975
No 103
>PRK10115 protease 2; Provisional
Probab=99.26 E-value=2.4e-10 Score=118.10 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=82.9
Q ss_pred CCCCCeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCccChhhhHHHHHHHHHHCCC
Q 016103 138 DLETNHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSF-------DTNGITSLSQYVKPLTDFLEKLPD 208 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~l~~ 208 (395)
.+..|+||++||..+... .|......|.++||.|+.++.||.|.-.. ......+++|+++.+..+++.--.
T Consensus 442 ~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~ 521 (686)
T PRK10115 442 KGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYG 521 (686)
T ss_pred CCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCC
Confidence 345699999999866553 47777788999999999999999765432 112235677777766666655212
Q ss_pred -CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 209 -AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 209 -~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
.+++.+.|.|.||+++..++.++|++++++|...+..
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 2599999999999999999999999999999998864
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.25 E-value=2.2e-10 Score=98.52 Aligned_cols=228 Identities=17% Similarity=0.181 Sum_probs=126.0
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CccChhhhHH-HHHHHHHHCC---CCCcEEEEE
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN--GITSLSQYVK-PLTDFLEKLP---DAEKVILVG 216 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~-~l~~~l~~l~---~~~~v~lvG 216 (395)
.|+.-.+.|.....+++++..++..||.|+.+|+||.|.|..... ..+...|++. |+...|+.+. ...+.+.||
T Consensus 32 ~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vg 111 (281)
T COG4757 32 RLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVG 111 (281)
T ss_pred cEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEee
Confidence 455555667777888999999999999999999999999975432 2345555553 4555554432 225899999
Q ss_pred eChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchh-HHhhhcC-------CchHHHHHHHHHHhhcCCCCCCcchhhh
Q 016103 217 HDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLL-DMFSQQT-------GSTDLMRQAQIFLYANGNNKPPTAIDLD 288 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (395)
||+||.+.-.+.. ++ ++......+...-..+.... ....... ....+.......+...+.+.+.....--
T Consensus 112 HS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW 189 (281)
T COG4757 112 HSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDW 189 (281)
T ss_pred ccccceeeccccc-Cc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchHHHHH
Confidence 9999997665554 44 45554444443322211110 0000000 0000000001111111111111111101
Q ss_pred HHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCe--EEE
Q 016103 289 KSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEK--VFR 366 (395)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~--~~~ 366 (395)
..+.+..-+....+.. ..+....+ .+++||+++...+|+.+|+...+.+....+|+. ...
T Consensus 190 ~RwcR~p~y~fddp~~----------~~~~q~ya--------aVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~ 251 (281)
T COG4757 190 ARWCRHPRYYFDDPAM----------RNYRQVYA--------AVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRD 251 (281)
T ss_pred HHHhcCccccccChhH----------hHHHHHHH--------HhcCceeeeccCCCCcCCHHHHHHHHHhhhcCccccee
Confidence 1111100000000000 01112222 346999999999999999999999999888774 444
Q ss_pred ecC----CCCCCcccCh-HHHHHHHHHHh
Q 016103 367 LKG----ADHSPFFSKP-QALHKLLVEIS 390 (395)
Q Consensus 367 i~~----~GH~~~~e~p-~~v~~~I~~fl 390 (395)
++. -||+-.+-+| |.+.+.+.+|+
T Consensus 252 ~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 252 LPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred cCcccCcccchhhhccchHHHHHHHHHhh
Confidence 443 3999999888 77888877775
No 105
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.24 E-value=4.2e-10 Score=101.31 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=88.5
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
|+|+++|+.++...+|..++..|... ..|+.++.||++.-. ....+++++++...+.|.......+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~---~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGE---QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCcccccc---cccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999997 999999999998633 23468999999988888888666799999999999
Q ss_pred HHHHHHHHHC---CCCcceEEEEccccc
Q 016103 222 ACISYAMELF---PFKISKAVFIAAAML 246 (395)
Q Consensus 222 ~~a~~~a~~~---p~~V~~lVli~~~~~ 246 (395)
.+|..+|.+. -+.|..|+++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999863 457999999999876
No 106
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.24 E-value=2.3e-11 Score=89.57 Aligned_cols=65 Identities=29% Similarity=0.397 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHH
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLE 204 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~ 204 (395)
.+.+|+++||++.+...|..+++.|+++||.|+++|+||||.|........+++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 36799999999999999999999999999999999999999998766667789999999998864
No 107
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.23 E-value=2.1e-10 Score=102.58 Aligned_cols=106 Identities=21% Similarity=0.193 Sum_probs=75.3
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH-C------CCCC
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK-L------PDAE 210 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-l------~~~~ 210 (395)
.+.-|+|||+||+......|..+.++++++||.|+.+|+...+... ...+.....+.++.+.+-++. + +. .
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~-s 91 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESKLPLGVKPDF-S 91 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhhccccccccc-c
Confidence 4456899999999988888999999999999999999976543211 111111222222222221111 1 33 3
Q ss_pred cEEEEEeChhHHHHHHHHHHC-----CCCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMELF-----PFKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~-----p~~V~~lVli~~~~ 245 (395)
++.|.|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 899999999999999999887 55899999999974
No 108
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.22 E-value=8.4e-10 Score=102.06 Aligned_cols=243 Identities=13% Similarity=0.145 Sum_probs=135.6
Q ss_pred CCCCCeEEEEcCCCCChhhHH-H-HHHHHHhCCCEEEEEcCCCCCCCCCCCC---CccChhhh----------HHHHHHH
Q 016103 138 DLETNHFVLVHGGGFGAWCWY-K-TIALLEEGGFKVTAIDLTGAGIHSFDTN---GITSLSQY----------VKPLTDF 202 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~-~-~~~~L~~~G~~v~~~d~~G~G~s~~~~~---~~~~~~~~----------~~~l~~~ 202 (395)
...+|.+|.++|.|+.....+ . ++..|.++|+..+.+..|-||.-..... ...+..++ +..+..+
T Consensus 89 ~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 89 SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 456889999999887443332 2 3778888899999999999987643211 11122222 2345556
Q ss_pred HHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhH-HhhhcCCchHHHHHHHHHHhhcCCCCC
Q 016103 203 LEKLPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLD-MFSQQTGSTDLMRQAQIFLYANGNNKP 281 (395)
Q Consensus 203 l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (395)
++..|.. ++.|.|.||||.+|...|..+|..|..+-.+++.... ..+.+ .+.....+..+.+......+.......
T Consensus 169 l~~~G~~-~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs--~vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~ 245 (348)
T PF09752_consen 169 LEREGYG-PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS--VVFTEGVLSNSINWDALEKQFEDTVYEEEISDI 245 (348)
T ss_pred HHhcCCC-ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC--cchhhhhhhcCCCHHHHHHHhcccchhhhhccc
Confidence 6666886 9999999999999999999999877766666554321 11111 122222222222221111100000000
Q ss_pred CcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCC
Q 016103 282 PTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPP 361 (395)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~ 361 (395)
..... .......-......+........+ +....+..+ ......--+++|.+++|.+||......+.+..|+
T Consensus 246 ~~~~~--~~~~~~~~~~~~~~Ea~~~m~~~m---d~~T~l~nf---~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WPG 317 (348)
T PF09752_consen 246 PAQNK--SLPLDSMEERRRDREALRFMRGVM---DSFTHLTNF---PVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWPG 317 (348)
T ss_pred ccCcc--cccchhhccccchHHHHHHHHHHH---Hhhcccccc---CCCCCCCcEEEEEecCceEechhhcchHHHhCCC
Confidence 00000 000000000000011111110000 000000110 0111123579999999999999888899999999
Q ss_pred CeEEEecCCCCC-CcccChHHHHHHHHHHhcC
Q 016103 362 EKVFRLKGADHS-PFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 362 ~~~~~i~~~GH~-~~~e~p~~v~~~I~~fl~~ 392 (395)
+++.++++ ||. .++-+.+.+.++|.+-+++
T Consensus 318 sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 318 SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred CeEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 99999996 996 5677889999999987764
No 109
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.21 E-value=1.3e-09 Score=90.33 Aligned_cols=173 Identities=14% Similarity=0.165 Sum_probs=117.0
Q ss_pred CCeEEEEcCCCCC-hhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 141 TNHFVLVHGGGFG-AWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 141 ~~~vv~~HG~~~~-~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
.+.+|++||+.++ ...|+...+.=.. .+-.+++. .......+++++.|.+.+... . ++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQD--------DWEAPVLDDWIARLEKEVNAA-E-GPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhCc---cchhcccC--------CCCCCCHHHHHHHHHHHHhcc-C-CCeEEEEecc
Confidence 3579999999554 4678775543221 13333332 123357899999999888887 3 4799999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCC
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQ 299 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (395)
|+.+++.++.+.-..|.|++|++++-...........
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~~~~------------------------------------------- 105 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRPKHL------------------------------------------- 105 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccchhhc-------------------------------------------
Confidence 9999999999877789999999997532210000000
Q ss_pred CchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCc---c
Q 016103 300 SPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPF---F 376 (395)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~---~ 376 (395)
..+...+. . ..--|.+++...+|++++++.++.+++.. ++.++.+.++||+-- +
T Consensus 106 ----------~tf~~~p~----~--------~lpfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~ 162 (181)
T COG3545 106 ----------MTFDPIPR----E--------PLPFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGF 162 (181)
T ss_pred ----------cccCCCcc----c--------cCCCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcC
Confidence 00000000 0 11368999999999999999999999988 457788888899754 3
Q ss_pred cChHHHHHHHHHHhcC
Q 016103 377 SKPQALHKLLVEISKL 392 (395)
Q Consensus 377 e~p~~v~~~I~~fl~~ 392 (395)
....+....+.+|+.+
T Consensus 163 g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 163 GPWPEGYALLAQLLSR 178 (181)
T ss_pred CCcHHHHHHHHHHhhh
Confidence 3445667777777654
No 110
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.21 E-value=5.6e-11 Score=114.08 Aligned_cols=105 Identities=21% Similarity=0.264 Sum_probs=60.8
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCC-CCCCCCC---C--------------------CCccC---
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTG-AGIHSFD---T--------------------NGITS--- 191 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G-~G~s~~~---~--------------------~~~~~--- 191 (395)
..-|+|||.||+++++..+..++..|+++||-|+++|||. ++-.... . .....
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 4468999999999999999999999999999999999994 3221000 0 00000
Q ss_pred -------hhhhHHHHHHHHHHC--------------------------CCCCcEEEEEeChhHHHHHHHHHHCCCCcceE
Q 016103 192 -------LSQYVKPLTDFLEKL--------------------------PDAEKVILVGHDFGGACISYAMELFPFKISKA 238 (395)
Q Consensus 192 -------~~~~~~~l~~~l~~l--------------------------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~l 238 (395)
++.-++++..+++.+ +.+ +|.++|||+||++++.++... .+++..
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhhc-cCcceE
Confidence 011122333333221 133 799999999999999988876 679999
Q ss_pred EEEcccc
Q 016103 239 VFIAAAM 245 (395)
Q Consensus 239 Vli~~~~ 245 (395)
|++++..
T Consensus 256 I~LD~W~ 262 (379)
T PF03403_consen 256 ILLDPWM 262 (379)
T ss_dssp EEES---
T ss_pred EEeCCcc
Confidence 9999875
No 111
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.20 E-value=1.3e-09 Score=88.39 Aligned_cols=179 Identities=16% Similarity=0.153 Sum_probs=123.6
Q ss_pred CeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCC-----CCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 142 NHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGA-----GIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 142 ~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~-----G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
-+||+-||.|.+.+ ....++..|+.+|+.|..+++|-. |....++....-..++...+.++...+... +.++
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g-pLi~ 93 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG-PLII 93 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-ceee
Confidence 37899999977665 578899999999999999999753 322222333344567777788888877664 9999
Q ss_pred EEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 215 VGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
-||||||-++...+...-..|.+|++++-+..+.+.+..-.
T Consensus 94 GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~~R--------------------------------------- 134 (213)
T COG3571 94 GGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQLR--------------------------------------- 134 (213)
T ss_pred ccccccchHHHHHHHhhcCCcceEEEecCccCCCCCcccch---------------------------------------
Confidence 99999999999988875556999999987654443210000
Q ss_pred HhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCC
Q 016103 295 LLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSP 374 (395)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~ 374 (395)
...+.-+++|++|.+|+.|.+-..+..... ...+..++++++++.|..
T Consensus 135 -------------------------------t~HL~gl~tPtli~qGtrD~fGtr~~Va~y-~ls~~iev~wl~~adHDL 182 (213)
T COG3571 135 -------------------------------TEHLTGLKTPTLITQGTRDEFGTRDEVAGY-ALSDPIEVVWLEDADHDL 182 (213)
T ss_pred -------------------------------hhhccCCCCCeEEeecccccccCHHHHHhh-hcCCceEEEEeccCcccc
Confidence 000111258999999999998876655322 233567999999999975
Q ss_pred ccc----------ChHHHHHHHHHHhcC
Q 016103 375 FFS----------KPQALHKLLVEISKL 392 (395)
Q Consensus 375 ~~e----------~p~~v~~~I~~fl~~ 392 (395)
--. +-...++.|..|+.+
T Consensus 183 kp~k~vsgls~~~hL~~~A~~va~~~~~ 210 (213)
T COG3571 183 KPRKLVSGLSTADHLKTLAEQVAGWARR 210 (213)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHhh
Confidence 321 123456666777654
No 112
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.18 E-value=1.4e-10 Score=102.92 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=90.6
Q ss_pred CCCeEEEEcCCCCChhhHHH----HHHHHHhCCCEEEEEcCCC-----CCCCCC------------C------C----CC
Q 016103 140 ETNHFVLVHGGGFGAWCWYK----TIALLEEGGFKVTAIDLTG-----AGIHSF------------D------T----NG 188 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~----~~~~L~~~G~~v~~~d~~G-----~G~s~~------------~------~----~~ 188 (395)
.++.|+||||++.++..|+. +...|.+.++.++.+|-|- -|.... + . ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 46789999999999998865 4455555359999998652 111110 0 0 01
Q ss_pred ccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC--------CCCcceEEEEcccccCCCcchhHHhhhcC
Q 016103 189 ITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF--------PFKISKAVFIAAAMLTNGQNLLDMFSQQT 260 (395)
Q Consensus 189 ~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~--------p~~V~~lVli~~~~~~~~~~~~~~~~~~~ 260 (395)
...+++..+.|.++++..+. -..|+|+|.||.+|..++... ...++-+|+++++.+....
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 23456666777777777662 458999999999998887532 1247889999887542110
Q ss_pred CchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEE
Q 016103 261 GSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIE 340 (395)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~ 340 (395)
+.... ....+++|+|.|+
T Consensus 151 --------------------------------------------------------~~~~~------~~~~i~iPtlHv~ 168 (212)
T PF03959_consen 151 --------------------------------------------------------YQELY------DEPKISIPTLHVI 168 (212)
T ss_dssp --------------------------------------------------------GTTTT--------TT---EEEEEE
T ss_pred --------------------------------------------------------hhhhh------ccccCCCCeEEEE
Confidence 00000 1122369999999
Q ss_pred cCCCCccCHHHHHHHHhhCCC-CeEEEecCCCCCCcccCh
Q 016103 341 TPEDNAIPIALQQSMINSSPP-EKVFRLKGADHSPFFSKP 379 (395)
Q Consensus 341 G~~D~~vp~~~~~~l~~~l~~-~~~~~i~~~GH~~~~e~p 379 (395)
|++|.+++++..+.+.+.+.+ .+++..+ +||.++....
T Consensus 169 G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 169 GENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp ETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred eCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 999999999999999888877 7888887 5999876543
No 113
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.17 E-value=2.2e-10 Score=107.23 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=82.1
Q ss_pred CCCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhH-----HHHHHHHHHCCCC
Q 016103 140 ETNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYV-----KPLTDFLEKLPDA 209 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~-----~~l~~~l~~l~~~ 209 (395)
-++|++++|-+-.....| ..++..|.++|+.|+.+++++-..+.. ..++++++ +.|..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 467899999988777665 468889999999999999987665543 34566666 3445555556775
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCCC-cceEEEEcccccCC
Q 016103 210 EKVILVGHDFGGACISYAMELFPFK-ISKAVFIAAAMLTN 248 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~~-V~~lVli~~~~~~~ 248 (395)
+|.++|||.||+++..+++.++.+ |+.++++.+...+.
T Consensus 182 -~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 -DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred -ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999999988887 99999998876544
No 114
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.16 E-value=6.8e-10 Score=102.54 Aligned_cols=107 Identities=18% Similarity=0.052 Sum_probs=72.0
Q ss_pred CCCCCeEEEEcCCCCCh-hhHHHH---------HHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH--
Q 016103 138 DLETNHFVLVHGGGFGA-WCWYKT---------IALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK-- 205 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~-~~~~~~---------~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-- 205 (395)
...-|+||..|+++.+. ...... ...++++||.|+.+|.||.|.|....... ...-++|..++|+.
T Consensus 17 ~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~ 94 (272)
T PF02129_consen 17 GGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIA 94 (272)
T ss_dssp SSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHH
T ss_pred CCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHH
Confidence 44568999999998654 222211 12389999999999999999998654331 33344444444444
Q ss_pred -CCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 206 -LPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 206 -l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
.... .+|.++|.|++|.+++.+|...|..+++++...+...
T Consensus 95 ~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 95 AQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp HCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred hCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 3321 4999999999999999999988888999999887653
No 115
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.15 E-value=1.9e-10 Score=102.00 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=61.1
Q ss_pred EEEEcCCCCCh---hhHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH-----CCCCCcEEE
Q 016103 144 FVLVHGGGFGA---WCWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK-----LPDAEKVIL 214 (395)
Q Consensus 144 vv~~HG~~~~~---~~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-----l~~~~~v~l 214 (395)
||++||.+... .....++..|++ .|+.|+.+|+|=..... ....+++..+.+..++++ .+. ++|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~----~p~~~~D~~~a~~~l~~~~~~~~~d~-~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP----FPAALEDVKAAYRWLLKNADKLGIDP-ERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS----TTHHHHHHHHHHHHHHHTHHHHTEEE-EEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc----ccccccccccceeeeccccccccccc-cceEE
Confidence 79999986543 334455566654 79999999998432111 112234444444444444 334 49999
Q ss_pred EEeChhHHHHHHHHHHCCC----CcceEEEEccccc
Q 016103 215 VGHDFGGACISYAMELFPF----KISKAVFIAAAML 246 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~----~V~~lVli~~~~~ 246 (395)
+|+|.||.+|+.++.+..+ .++++++++|...
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTD 111 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSS
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhccccccc
Confidence 9999999999999876433 3899999999653
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.13 E-value=1.6e-09 Score=97.88 Aligned_cols=203 Identities=24% Similarity=0.261 Sum_probs=115.6
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHH-hCCCE----EEEEcCCCC----CCCC---CCC--------CCccChhhhHHH
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLE-EGGFK----VTAIDLTGA----GIHS---FDT--------NGITSLSQYVKP 198 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~-~~G~~----v~~~d~~G~----G~s~---~~~--------~~~~~~~~~~~~ 198 (395)
...-|.||+||++++...+..++..+. ++|.. ++-++--|. |.=. ..+ ....+....+..
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 345689999999999999999999997 66542 333443332 2111 111 111246666776
Q ss_pred HHHHHHHC----CCCCcEEEEEeChhHHHHHHHHHHCCC-----CcceEEEEcccccCCCcchhHHhhhcCCchHHHHHH
Q 016103 199 LTDFLEKL----PDAEKVILVGHDFGGACISYAMELFPF-----KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQA 269 (395)
Q Consensus 199 l~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (395)
+..+|..| +++ ++.+|||||||..++.++..+-. +|.++|.|+++...........-...
T Consensus 89 l~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~---------- 157 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQND---------- 157 (255)
T ss_dssp HHHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-----------
T ss_pred HHHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhh----------
Confidence 66666654 775 99999999999999999988532 48999999997643211000000000
Q ss_pred HHHHhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhh-HhhhhccccccCCccEEEEEcC------
Q 016103 270 QIFLYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPV-LEKLSLSDMKYGSVRRFYIETP------ 342 (395)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~PvliI~G~------ 342 (395)
+... . +. .....+..++ .. ...+ ..++.+|-|+|+
T Consensus 158 ---~~~~---g-p~---~~~~~y~~l~----------------------~~~~~~~------p~~i~VLnI~G~~~~g~~ 199 (255)
T PF06028_consen 158 ---LNKN---G-PK---SMTPMYQDLL----------------------KNRRKNF------PKNIQVLNIYGDLEDGSN 199 (255)
T ss_dssp ---CSTT-----BS---S--HHHHHHH----------------------HTHGGGS------TTT-EEEEEEEESBTTCS
T ss_pred ---hccc---C-Cc---ccCHHHHHHH----------------------HHHHhhC------CCCeEEEEEecccCCCCC
Confidence 0000 0 00 0011111110 00 0011 125889999998
Q ss_pred CCCccCHHHHHHHHhhCCC----CeEEEecC--CCCCCcccChHHHHHHHHHHhc
Q 016103 343 EDNAIPIALQQSMINSSPP----EKVFRLKG--ADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 343 ~D~~vp~~~~~~l~~~l~~----~~~~~i~~--~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
.|..||...+..+...+.+ .+-.++.| +.|.-..|++ +|.+.|.+||=
T Consensus 200 sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 200 SDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp BTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 7999999988877776643 35556654 5788777776 57899999973
No 117
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.12 E-value=3.5e-10 Score=95.45 Aligned_cols=201 Identities=12% Similarity=0.147 Sum_probs=121.2
Q ss_pred ccCCCCCCCeEEEEcCC---CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCC
Q 016103 134 EKLPDLETNHFVLVHGG---GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAE 210 (395)
Q Consensus 134 ~~~~~~~~~~vv~~HG~---~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~ 210 (395)
+.......+..||+||. -++...--.++..+..+||+|..+++ +.+.....-..++.++..-+..+++...-.+
T Consensus 60 Iwg~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k 136 (270)
T KOG4627|consen 60 IWGSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTK 136 (270)
T ss_pred EecCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccce
Confidence 34446678999999996 23333334455666777999999876 3433211111344555555666666654334
Q ss_pred cEEEEEeChhHHHHHHHHHH-CCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhH
Q 016103 211 KVILVGHDFGGACISYAMEL-FPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDK 289 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~-~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (395)
.+.+-|||.|+.+|+.+..+ +..+|.+++++++..... .+..... .+ ...+.
T Consensus 137 ~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~------EL~~te~-------------g~-------dlgLt- 189 (270)
T KOG4627|consen 137 VLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR------ELSNTES-------------GN-------DLGLT- 189 (270)
T ss_pred eEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH------HHhCCcc-------------cc-------ccCcc-
Confidence 67777999999999987765 445799999998864210 0000000 00 00000
Q ss_pred HHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecC
Q 016103 290 SLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKG 369 (395)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~ 369 (395)
.. ... .....+. .....++|+|++.|++|.---.+..+.++..+..+.+..+++
T Consensus 190 -----------~~-~ae---------~~Scdl~-----~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n 243 (270)
T KOG4627|consen 190 -----------ER-NAE---------SVSCDLW-----EYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKN 243 (270)
T ss_pred -----------cc-hhh---------hcCccHH-----HhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCC
Confidence 00 000 0000111 112236899999999998666788888999888999999999
Q ss_pred CCCCCcccCh----HHHHHHHHHHh
Q 016103 370 ADHSPFFSKP----QALHKLLVEIS 390 (395)
Q Consensus 370 ~GH~~~~e~p----~~v~~~I~~fl 390 (395)
.+|+-.++.- ..+...+.+|+
T Consensus 244 ~~hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 244 YDHYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred cchhhHHHHhccccchHHHHHHHHh
Confidence 9999766542 34555555554
No 118
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.12 E-value=4.5e-09 Score=92.83 Aligned_cols=107 Identities=14% Similarity=0.114 Sum_probs=72.4
Q ss_pred CCCeEEEEcCCCCChhhHHHH--HHHHH-hCCCEEEEEcCCCCCCCCC-----C---CCCccChhhhHHHHHHHHHHCCC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKT--IALLE-EGGFKVTAIDLTGAGIHSF-----D---TNGITSLSQYVKPLTDFLEKLPD 208 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~--~~~L~-~~G~~v~~~d~~G~G~s~~-----~---~~~~~~~~~~~~~l~~~l~~l~~ 208 (395)
..|.||++||.+.+...+... ...|+ ++||.|+.|+......... . .....+...++..|..+..+.++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 468999999999999876542 22444 4689999998642211100 0 01111222233344444555555
Q ss_pred C-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 209 A-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 209 ~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+ .+|++.|+|.||+++..++..+|+.+.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 4 5999999999999999999999999999888887653
No 119
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.11 E-value=8.2e-10 Score=97.27 Aligned_cols=208 Identities=17% Similarity=0.140 Sum_probs=124.9
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----CC----------------ccChhhhHHH
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT----NG----------------ITSLSQYVKP 198 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~----~~----------------~~~~~~~~~~ 198 (395)
+.-|.||-.||++++.+.|..+.. ++..||.|+.+|.||.|.++..+ .. .+-......|
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred CccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 556899999999999998877764 45559999999999999884311 11 0111122334
Q ss_pred HHHHHHHC------CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHH
Q 016103 199 LTDFLEKL------PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIF 272 (395)
Q Consensus 199 l~~~l~~l------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (395)
+..+++.+ .. ++|.+.|.|.||.+++.+++..| +|++++.+-|+...-.. . ... ....-...+..+
T Consensus 160 ~~~ave~~~sl~~vde-~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-~----i~~-~~~~~ydei~~y 231 (321)
T COG3458 160 AVRAVEILASLDEVDE-ERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-A----IEL-ATEGPYDEIQTY 231 (321)
T ss_pred HHHHHHHHhccCccch-hheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-h----eee-cccCcHHHHHHH
Confidence 44444432 33 59999999999999999998765 69999888776532110 0 000 111111122222
Q ss_pred HhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHH
Q 016103 273 LYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQ 352 (395)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~ 352 (395)
+... .+.+..... .+.-.+...+ ...+++|+|+..|-.|++||+..+
T Consensus 232 ~k~h-----------------------~~~e~~v~~--TL~yfD~~n~--------A~RiK~pvL~svgL~D~vcpPstq 278 (321)
T COG3458 232 FKRH-----------------------DPKEAEVFE--TLSYFDIVNL--------AARIKVPVLMSVGLMDPVCPPSTQ 278 (321)
T ss_pred HHhc-----------------------CchHHHHHH--HHhhhhhhhH--------HHhhccceEEeecccCCCCCChhh
Confidence 2111 111000000 0111111222 223479999999999999999999
Q ss_pred HHHHhhCCCC-eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 353 QSMINSSPPE-KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 353 ~~l~~~l~~~-~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
-.+++.++.. ++.+++.-+|.-. |.-..+.+..|++
T Consensus 279 FA~yN~l~~~K~i~iy~~~aHe~~---p~~~~~~~~~~l~ 315 (321)
T COG3458 279 FAAYNALTTSKTIEIYPYFAHEGG---PGFQSRQQVHFLK 315 (321)
T ss_pred HHHhhcccCCceEEEeeccccccC---cchhHHHHHHHHH
Confidence 9999988754 5677776667543 3334444555554
No 120
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.10 E-value=5.8e-09 Score=89.63 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=116.5
Q ss_pred CCCeEEEEcCCCCChhhHHH----HHHHHHhCCCEEEEEcCCCC----CCC--C------CCC-----------------
Q 016103 140 ETNHFVLVHGGGFGAWCWYK----TIALLEEGGFKVTAIDLTGA----GIH--S------FDT----------------- 186 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~----~~~~L~~~G~~v~~~d~~G~----G~s--~------~~~----------------- 186 (395)
.++.|+|+||+-.+...|.. +.+.|.+. +..+.+|-|-- +.+ . .+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 46789999999988887743 55566665 77888887720 000 0 000
Q ss_pred CCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC------CC--CcceEEEEcccccCCCcchhHHhhh
Q 016103 187 NGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF------PF--KISKAVFIAAAMLTNGQNLLDMFSQ 258 (395)
Q Consensus 187 ~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~------p~--~V~~lVli~~~~~~~~~~~~~~~~~ 258 (395)
......++-.+-|.+.+.+.|. --.|+|+|.|+.++..++..- .+ .++-+|+++++......
T Consensus 83 ~~~~~~eesl~yl~~~i~enGP--FDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGP--FDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCC--CccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 1112344456677777777763 348999999999999888721 11 26778888876432100
Q ss_pred cCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEE
Q 016103 259 QTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFY 338 (395)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 338 (395)
+.... . ...+++|.|.
T Consensus 153 ---------------------------------~~~~~-----------------------~--------~~~i~~PSLH 168 (230)
T KOG2551|consen 153 ---------------------------------LDESA-----------------------Y--------KRPLSTPSLH 168 (230)
T ss_pred ---------------------------------hhhhh-----------------------h--------ccCCCCCeeE
Confidence 00000 0 1123699999
Q ss_pred EEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccCh--HHHHHHHHHHhc
Q 016103 339 IETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKP--QALHKLLVEISK 391 (395)
Q Consensus 339 I~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p--~~v~~~I~~fl~ 391 (395)
|.|+.|.++|.+....+++.+++..++..+ +||+++-.++ +.+.+.|..|++
T Consensus 169 i~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 169 IFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred EecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999777777 5999887664 345555555544
No 121
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.10 E-value=2.2e-09 Score=111.90 Aligned_cols=85 Identities=14% Similarity=0.060 Sum_probs=65.8
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC-------------------CCcEEEEEeCh
Q 016103 159 KTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD-------------------AEKVILVGHDF 219 (395)
Q Consensus 159 ~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~-------------------~~~v~lvGhS~ 219 (395)
.+.+.|..+||.|+.+|.||+|.|++.... .. .+-.+|..++|+++.- +.+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-GD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-CC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 456789999999999999999999864321 11 3344555555555530 25999999999
Q ss_pred hHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 220 GGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 220 Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
||++++.+|...|..++++|.+++..
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 99999999999888899999987763
No 122
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.08 E-value=1.4e-09 Score=95.45 Aligned_cols=106 Identities=20% Similarity=0.155 Sum_probs=75.5
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-------CCCC
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-------PDAE 210 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-------~~~~ 210 (395)
.+.-|+|+|+||+......|..+..+++++||-|+++++-..-. .....+..+....++.+..-|.++ ++.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~- 120 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP-PDGQDEIKSAASVINWLPEGLQHVLPENVEANLS- 120 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC-CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccc-
Confidence 55669999999999999999999999999999999999864211 000011112222233333333332 344
Q ss_pred cEEEEEeChhHHHHHHHHHHCC--CCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMELFP--FKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p--~~V~~lVli~~~~ 245 (395)
++.++|||.||-+|..+|..+. -++.+||-++|..
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 9999999999999999998773 2588999999864
No 123
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.07 E-value=1.7e-09 Score=96.55 Aligned_cols=104 Identities=18% Similarity=0.203 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHh--------CCCEEEEEcCCCCCCCCCCCCCccChhhhH----HHHHHHHHHC-
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEE--------GGFKVTAIDLTGAGIHSFDTNGITSLSQYV----KPLTDFLEKL- 206 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~--------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~----~~l~~~l~~l- 206 (395)
.+.+|||+||.+++...|+.+...+.. ..++++++|+......- ....+.+.+ +.+..+++.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~----~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF----HGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc----ccccHHHHHHHHHHHHHHHHHhhh
Confidence 568999999999999988888776632 24889999987643221 112233333 3444444444
Q ss_pred ---CCCCcEEEEEeChhHHHHHHHHHHCC---CCcceEEEEcccccC
Q 016103 207 ---PDAEKVILVGHDFGGACISYAMELFP---FKISKAVFIAAAMLT 247 (395)
Q Consensus 207 ---~~~~~v~lvGhS~Gg~~a~~~a~~~p---~~V~~lVli~~~~~~ 247 (395)
...++|+||||||||.+|..++...+ +.|+.+|.++++...
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 22359999999999999988876543 479999999988643
No 124
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.05 E-value=5e-09 Score=100.14 Aligned_cols=107 Identities=22% Similarity=0.190 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCCCChhhH------HHHHHHHHhCCCEEEEEcCCCCCCCCC----CC-----CCccChhhhHH-HHHH-
Q 016103 139 LETNHFVLVHGGGFGAWCW------YKTIALLEEGGFKVTAIDLTGAGIHSF----DT-----NGITSLSQYVK-PLTD- 201 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~------~~~~~~L~~~G~~v~~~d~~G~G~s~~----~~-----~~~~~~~~~~~-~l~~- 201 (395)
+.+|+|++.||+.+++..| ..++-.|++.||.|..-+.||.-.|.. .+ -..+++.+++. ||-+
T Consensus 71 ~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~ 150 (403)
T KOG2624|consen 71 KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAM 150 (403)
T ss_pred CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHH
Confidence 7789999999999999999 346678899999999999999766632 11 12356666553 4444
Q ss_pred ---HHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC---CcceEEEEccccc
Q 016103 202 ---FLEKLPDAEKVILVGHDFGGACISYAMELFPF---KISKAVFIAAAML 246 (395)
Q Consensus 202 ---~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~V~~lVli~~~~~ 246 (395)
+++.-+.. +++.||||.|+.+...++...|+ +|+.+++++|...
T Consensus 151 IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 151 IDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred HHHHHHhcccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 44445664 99999999999999998888765 7999999999873
No 125
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.05 E-value=4.9e-09 Score=91.12 Aligned_cols=209 Identities=14% Similarity=0.124 Sum_probs=104.1
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC-CCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA-GIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKVI 213 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~ 213 (395)
....++||+..|++..-..|..++.+|+..||+|+.+|.-.| |.|++... .+++....+++..+++++ |.. ++.
T Consensus 27 ~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~-eftms~g~~sL~~V~dwl~~~g~~-~~G 104 (294)
T PF02273_consen 27 PKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDIN-EFTMSIGKASLLTVIDWLATRGIR-RIG 104 (294)
T ss_dssp ---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT----EE
T ss_pred cccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChh-hcchHHhHHHHHHHHHHHHhcCCC-cch
Confidence 345689999999999999999999999999999999998866 77876544 478888888777777665 775 999
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhc-CCCCCCcchhhhHHHH
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYAN-GNNKPPTAIDLDKSLL 292 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 292 (395)
||.-|+.|-+|+..|.+. .+.-||+.-+.... +..+ .....+-+.. .....+...++.
T Consensus 105 LIAaSLSaRIAy~Va~~i--~lsfLitaVGVVnl--r~TL-------------e~al~~Dyl~~~i~~lp~dldfe---- 163 (294)
T PF02273_consen 105 LIAASLSARIAYEVAADI--NLSFLITAVGVVNL--RDTL-------------EKALGYDYLQLPIEQLPEDLDFE---- 163 (294)
T ss_dssp EEEETTHHHHHHHHTTTS----SEEEEES--S-H--HHHH-------------HHHHSS-GGGS-GGG--SEEEET----
T ss_pred hhhhhhhHHHHHHHhhcc--CcceEEEEeeeeeH--HHHH-------------HHHhccchhhcchhhCCCccccc----
Confidence 999999999999999853 47777777654321 0000 0000000000 000001111100
Q ss_pred HHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC--CCeEEEecCC
Q 016103 293 KELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP--PEKVFRLKGA 370 (395)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~--~~~~~~i~~~ 370 (395)
......+.+...+....-.++...... ....++|++.+++++|.+|......++...+. ..+++.++|+
T Consensus 164 ----Gh~l~~~vFv~dc~e~~w~~l~ST~~~-----~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs 234 (294)
T PF02273_consen 164 ----GHNLGAEVFVTDCFEHGWDDLDSTIND-----MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGS 234 (294)
T ss_dssp ----TEEEEHHHHHHHHHHTT-SSHHHHHHH-----HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-
T ss_pred ----ccccchHHHHHHHHHcCCccchhHHHH-----HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCc
Confidence 000001111111111111122222222 22347999999999999999888888887553 5689999999
Q ss_pred CCCCcccCh
Q 016103 371 DHSPFFSKP 379 (395)
Q Consensus 371 GH~~~~e~p 379 (395)
.|-.- |+|
T Consensus 235 ~HdL~-enl 242 (294)
T PF02273_consen 235 SHDLG-ENL 242 (294)
T ss_dssp SS-TT-SSH
T ss_pred cchhh-hCh
Confidence 99864 444
No 126
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.03 E-value=5.9e-08 Score=84.56 Aligned_cols=249 Identities=15% Similarity=0.160 Sum_probs=145.1
Q ss_pred cccccCCCCCCCeEEEEcCCCCChhhHHHHHHHHHhC-C--CEEEEEcCCCCCCCCC--------CCCCccChhhhHHHH
Q 016103 131 NRDEKLPDLETNHFVLVHGGGFGAWCWYKTIALLEEG-G--FKVTAIDLTGAGIHSF--------DTNGITSLSQYVKPL 199 (395)
Q Consensus 131 ~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~-G--~~v~~~d~~G~G~s~~--------~~~~~~~~~~~~~~l 199 (395)
...+.....+.+.|++++|.++....|..++.+|... + +.++.+-+.||-.-.. ...+.++++++++.=
T Consensus 19 ~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HK 98 (301)
T KOG3975|consen 19 KPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHK 98 (301)
T ss_pred eeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHH
Confidence 3334444577889999999999999999998887653 1 5688888888865431 123557899999987
Q ss_pred HHHHHHC-CCCCcEEEEEeChhHHHHHHHHHHCC--CCcceEEEEcccccC-----CCcchh------H---H---hhhc
Q 016103 200 TDFLEKL-PDAEKVILVGHDFGGACISYAMELFP--FKISKAVFIAAAMLT-----NGQNLL------D---M---FSQQ 259 (395)
Q Consensus 200 ~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~p--~~V~~lVli~~~~~~-----~~~~~~------~---~---~~~~ 259 (395)
.++++.. .-+.+++++|||.|+++.+.+..... -.|.+++++-|.... .+.... . . +.-.
T Consensus 99 laFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~ 178 (301)
T KOG3975|consen 99 LAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYW 178 (301)
T ss_pred HHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeee
Confidence 7777654 44579999999999999999887422 258888888775421 111100 0 0 0001
Q ss_pred CCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEE
Q 016103 260 TGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYI 339 (395)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI 339 (395)
.......+....-+.......++......-..... .+......+......... ..+........+-+.+.
T Consensus 179 ~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l~h~---------~v~rn~v~la~qEm~eV~-~~d~e~~een~d~l~Fy 248 (301)
T KOG3975|consen 179 ILLPGFIRFILIKFMLCGSNGPQEFLSTALFLTHP---------QVVRNSVGLAAQEMEEVT-TRDIEYCEENLDSLWFY 248 (301)
T ss_pred ecChHHHHHHHHHHhcccCCCcHHHHhhHHHhhcH---------HHHHHHhhhchHHHHHHH-HhHHHHHHhcCcEEEEE
Confidence 11112222222222211111111111000000000 000000011111111110 11111111223678999
Q ss_pred EcCCCCccCHHHHHHHHhhCCCCe--EEEecCCCCCCcccChHHHHHHHHHHh
Q 016103 340 ETPEDNAIPIALQQSMINSSPPEK--VFRLKGADHSPFFSKPQALHKLLVEIS 390 (395)
Q Consensus 340 ~G~~D~~vp~~~~~~l~~~l~~~~--~~~i~~~GH~~~~e~p~~v~~~I~~fl 390 (395)
+|..|..||.+....+.+.+|..+ +-+ ++..|.+...+.+..+..+.+.+
T Consensus 249 ygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 249 YGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred ccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 999999999999999999998654 444 67899999999998888887765
No 127
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.02 E-value=7e-09 Score=87.95 Aligned_cols=180 Identities=18% Similarity=0.204 Sum_probs=117.0
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCCcEEEEEeC
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAEKVILVGHD 218 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lvGhS 218 (395)
.+||+-|=|+-...=..+++.|+++|+.|+.+|-+-+=.+ ..+.++.+.|+..++++. +.+ +++|||+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~w~~~-~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRARWGRK-RVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHHhCCc-eEEEEeec
Confidence 5788888776665557799999999999999997644333 246777788888777665 564 99999999
Q ss_pred hhHHHHHHHHHHCCC----CcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHH
Q 016103 219 FGGACISYAMELFPF----KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKE 294 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~----~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (395)
+|+-+.-....+.|. +|..++|+++.....-+-....+
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~w-------------------------------------- 118 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGW-------------------------------------- 118 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhh--------------------------------------
Confidence 999988888887775 79999999886432211100000
Q ss_pred HhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCC
Q 016103 295 LLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSP 374 (395)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~ 374 (395)
+...... ...+..+...++. ..|++.|+|+++.-.... .+ ..++.+++.+|| ||++
T Consensus 119 -lg~~~~~----------~~~~~~pei~~l~-------~~~v~CiyG~~E~d~~cp---~l--~~~~~~~i~lpG-gHHf 174 (192)
T PF06057_consen 119 -LGMGGDD----------AAYPVIPEIAKLP-------PAPVQCIYGEDEDDSLCP---SL--RQPGVEVIALPG-GHHF 174 (192)
T ss_pred -cCCCCCc----------ccCCchHHHHhCC-------CCeEEEEEcCCCCCCcCc---cc--cCCCcEEEEcCC-CcCC
Confidence 0000000 0001222333332 479999999876642211 11 125789999996 7876
Q ss_pred cccChHHHHHHHHHHhcC
Q 016103 375 FFSKPQALHKLLVEISKL 392 (395)
Q Consensus 375 ~~e~p~~v~~~I~~fl~~ 392 (395)
- ++.+.+++.|.+-+++
T Consensus 175 d-~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 175 D-GDYDALAKRILDALKA 191 (192)
T ss_pred C-CCHHHHHHHHHHHHhc
Confidence 4 4567788887776653
No 128
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.01 E-value=2.7e-08 Score=93.78 Aligned_cols=107 Identities=17% Similarity=0.137 Sum_probs=71.8
Q ss_pred CCCCCeEEEEcCCCCCh---hhH-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH---CCCC-
Q 016103 138 DLETNHFVLVHGGGFGA---WCW-YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK---LPDA- 209 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~---~~~-~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~---l~~~- 209 (395)
....|+||++||.+... ... ..+...+...|+.|+.+|+|-.-+-.. ...+++..+.+..+.++ ++.+
T Consensus 76 ~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~----p~~~~d~~~a~~~l~~~~~~~g~dp 151 (312)
T COG0657 76 AATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF----PAALEDAYAAYRWLRANAAELGIDP 151 (312)
T ss_pred CCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC----CchHHHHHHHHHHHHhhhHhhCCCc
Confidence 33579999999985433 333 556666677899999999985433321 12344444444444433 3443
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCC----CcceEEEEcccccCC
Q 016103 210 EKVILVGHDFGGACISYAMELFPF----KISKAVFIAAAMLTN 248 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~----~V~~lVli~~~~~~~ 248 (395)
+++.++|+|.||.+++.++..-.+ .....+++.+.....
T Consensus 152 ~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 152 SRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred cceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 589999999999999998876443 468889998876543
No 129
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.99 E-value=5.2e-09 Score=93.88 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=73.7
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCC------CCCCCc--------------c-------
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHS------FDTNGI--------------T------- 190 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~------~~~~~~--------------~------- 190 (395)
+.+-|+|||.||+|+++..|..+.-.|+++||.|.++++|.+-... ...++. .
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 4456899999999999999999999999999999999998764331 100000 0
Q ss_pred -ChhhhHHHH---HHHHHHC------------------------CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEc
Q 016103 191 -SLSQYVKPL---TDFLEKL------------------------PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIA 242 (395)
Q Consensus 191 -~~~~~~~~l---~~~l~~l------------------------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~ 242 (395)
.+...+..+ ..+|+.+ .. .++.++|||+||++++.....+. .++..|+++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~-s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD 272 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDT-SQAAVIGHSFGGATSIASSSSHT-DFRCAIALD 272 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhh-hhhhheeccccchhhhhhhcccc-ceeeeeeee
Confidence 011112222 2222222 11 37899999999999998877654 488888888
Q ss_pred cccc
Q 016103 243 AAML 246 (395)
Q Consensus 243 ~~~~ 246 (395)
+.+.
T Consensus 273 ~WM~ 276 (399)
T KOG3847|consen 273 AWMF 276 (399)
T ss_pred eeec
Confidence 8653
No 130
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.98 E-value=9e-08 Score=94.56 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=74.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHH------------------HHHhCCCEEEEEcCC-CCCCCCCCCC-CccChhhhHH
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIA------------------LLEEGGFKVTAIDLT-GAGIHSFDTN-GITSLSQYVK 197 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~------------------~L~~~G~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~ 197 (395)
..+.|+||+++|.++.+..+..+.+ .+.+. ..++.+|.| |+|.|..... ...+.++.++
T Consensus 74 ~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~ 152 (462)
T PTZ00472 74 NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVSE 152 (462)
T ss_pred CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHHH
Confidence 4567999999999888776533221 12222 679999986 8888854322 2345677888
Q ss_pred HHHHHHHHC-------CCCCcEEEEEeChhHHHHHHHHHHCC----------CCcceEEEEccccc
Q 016103 198 PLTDFLEKL-------PDAEKVILVGHDFGGACISYAMELFP----------FKISKAVFIAAAML 246 (395)
Q Consensus 198 ~l~~~l~~l-------~~~~~v~lvGhS~Gg~~a~~~a~~~p----------~~V~~lVli~~~~~ 246 (395)
|+.++++.. .. .+++|+|||+||.++..+|.+.- -.++++++-++...
T Consensus 153 d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 153 DMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccC
Confidence 888888743 33 49999999999999888876521 13678888887653
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.91 E-value=8.6e-09 Score=88.02 Aligned_cols=176 Identities=13% Similarity=0.124 Sum_probs=118.8
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCC-----------------CCCCccChhhhHHHHHHHH
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSF-----------------DTNGITSLSQYVKPLTDFL 203 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~-----------------~~~~~~~~~~~~~~l~~~l 203 (395)
...||++||++++...|..+++.|.......|+|.-|-.-.+.. ......++...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 35799999999999999988888877778888886553211100 0112234555666777777
Q ss_pred HHC---CCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCC
Q 016103 204 EKL---PDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNN 279 (395)
Q Consensus 204 ~~l---~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
++. ++. +++.+-|.|+||+++++.+..+|..+.+.+-..+..+.....
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~---------------------------- 134 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG---------------------------- 134 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------------------------
Confidence 764 332 488999999999999999999988888887777654311000
Q ss_pred CCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC
Q 016103 280 KPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS 359 (395)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l 359 (395)
+..... . ....|++..||+.|++||....+...+.+
T Consensus 135 ------------~~~~~~----------------------~----------~~~~~i~~~Hg~~d~~vp~~~g~~s~~~l 170 (206)
T KOG2112|consen 135 ------------LPGWLP----------------------G----------VNYTPILLCHGTADPLVPFRFGEKSAQFL 170 (206)
T ss_pred ------------ccCCcc----------------------c----------cCcchhheecccCCceeehHHHHHHHHHH
Confidence 000000 0 00379999999999999987765544433
Q ss_pred ----CCCeEEEecCCCCCCcccChHHHHHHHHH
Q 016103 360 ----PPEKVFRLKGADHSPFFSKPQALHKLLVE 388 (395)
Q Consensus 360 ----~~~~~~~i~~~GH~~~~e~p~~v~~~I~~ 388 (395)
...++..+++-+|...-+.-+++...|..
T Consensus 171 ~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 171 KSLGVRVTFKPYPGLGHSTSPQELDDLKSWIKT 203 (206)
T ss_pred HHcCCceeeeecCCccccccHHHHHHHHHHHHH
Confidence 34688899999998766555555555443
No 132
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.88 E-value=2e-07 Score=87.36 Aligned_cols=221 Identities=19% Similarity=0.174 Sum_probs=122.5
Q ss_pred CCCCeEEEEcCCCCC-----hhhHHHHHHHHH-hCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH------C
Q 016103 139 LETNHFVLVHGGGFG-----AWCWYKTIALLE-EGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK------L 206 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~-----~~~~~~~~~~L~-~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~------l 206 (395)
...|.|||+||.|.- ...+..+...++ +.+..|+.+|+|=.-+...| ...+|-.+.+..++++ .
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P----a~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP----AAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----ccchHHHHHHHHHHHhHHHHhCC
Confidence 567899999998643 335677777774 45789999999844333322 3455555555555553 2
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHC------CCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCC
Q 016103 207 PDAEKVILVGHDFGGACISYAMELF------PFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNK 280 (395)
Q Consensus 207 ~~~~~v~lvGhS~Gg~~a~~~a~~~------p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (395)
+. .+|.|+|-|.||.+|..+|.+. +-++++.|++-|..........+...............
T Consensus 164 D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~----------- 231 (336)
T KOG1515|consen 164 DP-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPK----------- 231 (336)
T ss_pred Cc-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHH-----------
Confidence 44 4899999999999999888753 34799999999976433221111110011100000000
Q ss_pred CCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCC-ccEEEEEcCCCCccCH--HHHHHHHh
Q 016103 281 PPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGS-VRRFYIETPEDNAIPI--ALQQSMIN 357 (395)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~PvliI~G~~D~~vp~--~~~~~l~~ 357 (395)
...+.. .+...... .+..++.............-.. .|+|++.++.|.+... ...+++.+
T Consensus 232 -------~~~~w~-~~lP~~~~---------~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk 294 (336)
T KOG1515|consen 232 -------IDKWWR-LLLPNGKT---------DLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKK 294 (336)
T ss_pred -------HHHHHH-HhCCCCCC---------CcCCccccccccccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHH
Confidence 000111 11110000 0000000000000000011112 4599999999998743 23455555
Q ss_pred hCCCCeEEEecCCCCCCcccChH-----HHHHHHHHHhcC
Q 016103 358 SSPPEKVFRLKGADHSPFFSKPQ-----ALHKLLVEISKL 392 (395)
Q Consensus 358 ~l~~~~~~~i~~~GH~~~~e~p~-----~v~~~I~~fl~~ 392 (395)
.--..++..++++.|.+++-.|. ++.+.|.+|+..
T Consensus 295 ~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 295 AGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred cCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 44455677899999987766553 577778888764
No 133
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=5.7e-08 Score=101.15 Aligned_cols=200 Identities=17% Similarity=0.187 Sum_probs=126.8
Q ss_pred CCCCeEEEEcCCCCChh-------hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-------CCccChhhhHHHHHHHHH
Q 016103 139 LETNHFVLVHGGGFGAW-------CWYKTIALLEEGGFKVTAIDLTGAGIHSFDT-------NGITSLSQYVKPLTDFLE 204 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~-------~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~l~~~l~ 204 (395)
.+-|.||.+||.+++.. .|... .....|+.|+.+|.||.|...... -+...+++....+..+++
T Consensus 524 ~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~ 601 (755)
T KOG2100|consen 524 KKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLK 601 (755)
T ss_pred CCCCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHh
Confidence 35688999999886322 34433 566789999999999988764321 133567777778888887
Q ss_pred HCCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceE-EEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCC
Q 016103 205 KLPDA-EKVILVGHDFGGACISYAMELFPFKISKA-VFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPP 282 (395)
Q Consensus 205 ~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~l-Vli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (395)
..-++ +++.|+|+|+||++++.++...|+.+.+. |.++|..... ..+... .+.
T Consensus 602 ~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~~----ter------------------ 656 (755)
T KOG2100|consen 602 LPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDSTY----TER------------------ 656 (755)
T ss_pred cccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eecccc----cHh------------------
Confidence 76444 59999999999999999999998655555 8888875321 000000 000
Q ss_pred cchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCcc-EEEEEcCCCCccCHHHHHHHHhhCC-
Q 016103 283 TAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVR-RFYIETPEDNAIPIALQQSMINSSP- 360 (395)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-vliI~G~~D~~vp~~~~~~l~~~l~- 360 (395)
+............ ....... ...++.| .|+|||+.|.-|+.+....+.+.+.
T Consensus 657 -------------ymg~p~~~~~~y~-----e~~~~~~--------~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~ 710 (755)
T KOG2100|consen 657 -------------YMGLPSENDKGYE-----ESSVSSP--------ANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQN 710 (755)
T ss_pred -------------hcCCCccccchhh-----hccccch--------hhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHH
Confidence 0000000000000 0000011 1112334 4999999999999888777766543
Q ss_pred ---CCeEEEecCCCCCCcccCh-HHHHHHHHHHhc
Q 016103 361 ---PEKVFRLKGADHSPFFSKP-QALHKLLVEISK 391 (395)
Q Consensus 361 ---~~~~~~i~~~GH~~~~e~p-~~v~~~I~~fl~ 391 (395)
..++.++|+.+|.+..-.. ..+...+..|+.
T Consensus 711 ~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 711 AGVPFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred CCCceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 2689999999999876543 557777777776
No 134
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.81 E-value=3.8e-07 Score=80.06 Aligned_cols=97 Identities=18% Similarity=0.147 Sum_probs=73.0
Q ss_pred EEcCCC--CChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHH
Q 016103 146 LVHGGG--FGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGAC 223 (395)
Q Consensus 146 ~~HG~~--~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 223 (395)
++|+.+ ++...|..+...|... +.|+++|++|++.+.... .+++++++.+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP---ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC---CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 455544 6778899999999874 999999999998765322 4677777766555544322248999999999999
Q ss_pred HHHHHHH---CCCCcceEEEEccccc
Q 016103 224 ISYAMEL---FPFKISKAVFIAAAML 246 (395)
Q Consensus 224 a~~~a~~---~p~~V~~lVli~~~~~ 246 (395)
+..++.+ .++.+.+++++++..+
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 9988886 4567999999987654
No 135
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.77 E-value=3e-08 Score=96.61 Aligned_cols=95 Identities=21% Similarity=0.237 Sum_probs=72.4
Q ss_pred CChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC-ccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH
Q 016103 152 FGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNG-ITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 152 ~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
.....|..+++.|.+.||.+ ..|++|+|.+.+.... ...++++.+.|.++.+..+.. +|+||||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGK-KVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhHHHHHHHHHH
Confidence 45689999999999999765 8899999998765321 122344444555555556664 99999999999999999998
Q ss_pred CCCC----cceEEEEcccccCC
Q 016103 231 FPFK----ISKAVFIAAAMLTN 248 (395)
Q Consensus 231 ~p~~----V~~lVli~~~~~~~ 248 (395)
+|+. |+++|+++++....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCC
Confidence 8863 78999998876543
No 136
>PRK04940 hypothetical protein; Provisional
Probab=98.77 E-value=1e-06 Score=74.68 Aligned_cols=171 Identities=12% Similarity=0.139 Sum_probs=98.0
Q ss_pred EEEEcCCCCChhh--HHHH-HHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcEEEEEe
Q 016103 144 FVLVHGGGFGAWC--WYKT-IALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKVILVGH 217 (395)
Q Consensus 144 vv~~HG~~~~~~~--~~~~-~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGh 217 (395)
||++||+.+++.+ .... ...+ .-+++++ +++ .....+.++.+.+.+..+ +..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999988887 4221 1122 1123433 332 123444455555555432 11138999999
Q ss_pred ChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHHHHHHHhc
Q 016103 218 DFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKSLLKELLF 297 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (395)
|+||+.|..++.++. + ..|+++|...+.. .+..+ +.. ......+....+.++.
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~~--~L~~~----------------ig~-----~~~y~~~~~~h~~eL~- 120 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPEE--NMEGK----------------IDR-----PEEYADIATKCVTNFR- 120 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChHH--HHHHH----------------hCC-----CcchhhhhHHHHHHhh-
Confidence 999999999999975 3 7889999864310 00000 000 0000011111111110
Q ss_pred CCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCCCC-eEEEecCCCCCCcc
Q 016103 298 NQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSPPE-KVFRLKGADHSPFF 376 (395)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~~~-~~~~i~~~GH~~~~ 376 (395)
+ ...-..+++..+.|.+.....+.... .+. ++.+.+|++|-+
T Consensus 121 --------------------------~------~~p~r~~vllq~gDEvLDyr~a~~~y---~~~y~~~v~~GGdH~f-- 163 (180)
T PRK04940 121 --------------------------E------KNRDRCLVILSRNDEVLDSQRTAEEL---HPYYEIVWDEEQTHKF-- 163 (180)
T ss_pred --------------------------h------cCcccEEEEEeCCCcccCHHHHHHHh---ccCceEEEECCCCCCC--
Confidence 0 01234689999999999876654433 344 688888877763
Q ss_pred cChHHHHHHHHHHhcC
Q 016103 377 SKPQALHKLLVEISKL 392 (395)
Q Consensus 377 e~p~~v~~~I~~fl~~ 392 (395)
++-+.....|.+|++.
T Consensus 164 ~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 164 KNISPHLQRIKAFKTL 179 (180)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 4566788888888853
No 137
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.76 E-value=2.7e-08 Score=93.13 Aligned_cols=106 Identities=18% Similarity=0.084 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcCCCCChhh--------------H----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC----ccChhhh
Q 016103 138 DLETNHFVLVHGGGFGAWC--------------W----YKTIALLEEGGFKVTAIDLTGAGIHSFDTNG----ITSLSQY 195 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~--------------~----~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~----~~~~~~~ 195 (395)
.++-|.||++||-+.+.+. + ..++..|+++||.|+++|.+|+|+....... .++...+
T Consensus 112 ~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~l 191 (390)
T PF12715_consen 112 KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQAL 191 (390)
T ss_dssp -S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHH
T ss_pred CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHH
Confidence 3456799999998766532 1 2357789999999999999999987543211 1111111
Q ss_pred H---------------HHHHHHHHHC------CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 196 V---------------KPLTDFLEKL------PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 196 ~---------------~~l~~~l~~l------~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+ -+....++.| .. ++|.++|+||||+.++.+|+.. ++|+..|..+...
T Consensus 192 a~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~-~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 192 ARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDP-DRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEE-EEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCc-cceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 1 1222234433 22 4999999999999999999975 5798888776543
No 138
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.76 E-value=3.8e-08 Score=87.85 Aligned_cols=102 Identities=19% Similarity=0.078 Sum_probs=66.6
Q ss_pred CeEEEEcCCCCChhhHHH--------HHHHHHhCCCEEEEEcCCC-CCCCCCCCCCccChhhhHHHHH-HHHHHCCCC-C
Q 016103 142 NHFVLVHGGGFGAWCWYK--------TIALLEEGGFKVTAIDLTG-AGIHSFDTNGITSLSQYVKPLT-DFLEKLPDA-E 210 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~--------~~~~L~~~G~~v~~~d~~G-~G~s~~~~~~~~~~~~~~~~l~-~~l~~l~~~-~ 210 (395)
|.|||+||.|.....-.. ++....+.++-|++|.+-- +..++. ....-+...++.+. .+.++.+++ .
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~--~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE--KTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc--ccchhHHHHHHHHHHHHhhccCcccc
Confidence 899999999877764332 2223334445566666321 111111 11122334445555 344556665 5
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+++++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 99999999999999999999999999999999853
No 139
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.74 E-value=8.9e-09 Score=90.81 Aligned_cols=88 Identities=26% Similarity=0.287 Sum_probs=53.9
Q ss_pred CeEEEEcCCCC-ChhhHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCC---CccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 142 NHFVLVHGGGF-GAWCWYKTIALLEEGGFK---VTAIDLTGAGIHSFDTN---GITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 142 ~~vv~~HG~~~-~~~~~~~~~~~L~~~G~~---v~~~d~~G~G~s~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
.||||+||.+. ....|..+++.|.++||. |+++++-.......... ...+..++.+.|..++..-+. +|.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa--kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA--KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT----EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC--EEEE
Confidence 48999999988 567899999999999999 89999854332111000 011223444455555555564 9999
Q ss_pred EEeChhHHHHHHHHHHC
Q 016103 215 VGHDFGGACISYAMELF 231 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~ 231 (395)
|||||||.++.++....
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999999988754
No 140
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.72 E-value=1.5e-07 Score=81.09 Aligned_cols=172 Identities=15% Similarity=0.161 Sum_probs=111.4
Q ss_pred CeEEEEcCC-CCChhhHHHHHHHHHhCCCEEEEEcCC-CCCCCCC-CCC------CccChhhhHHHHHHHH---HHCCCC
Q 016103 142 NHFVLVHGG-GFGAWCWYKTIALLEEGGFKVTAIDLT-GAGIHSF-DTN------GITSLSQYVKPLTDFL---EKLPDA 209 (395)
Q Consensus 142 ~~vv~~HG~-~~~~~~~~~~~~~L~~~G~~v~~~d~~-G~G~s~~-~~~------~~~~~~~~~~~l~~~l---~~l~~~ 209 (395)
..||++--+ |.....-+..+..++..||.|++||+- |--.+.. +.. ...+.+....++..++ +..+..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 356666554 445555788999999999999999975 3111111 000 0122233333444444 444644
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhH
Q 016103 210 EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDK 289 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (395)
.++.++|.+|||.++..+....| .+.+.+.+-+.....
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~----------------------------------------- 157 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS----------------------------------------- 157 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh-----------------------------------------
Confidence 69999999999999999888877 577777765543210
Q ss_pred HHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC-----CCeE
Q 016103 290 SLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP-----PEKV 364 (395)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~-----~~~~ 364 (395)
.....+++|++++.++.|.++|+.....+.+.+. +.++
T Consensus 158 -------------------------------------~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v 200 (242)
T KOG3043|consen 158 -------------------------------------ADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQV 200 (242)
T ss_pred -------------------------------------hHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeE
Confidence 0011236999999999999999988777766553 2469
Q ss_pred EEecCCCCCCcc-----cChH------HHHHHHHHHhcC
Q 016103 365 FRLKGADHSPFF-----SKPQ------ALHKLLVEISKL 392 (395)
Q Consensus 365 ~~i~~~GH~~~~-----e~p~------~v~~~I~~fl~~ 392 (395)
.++++-+|-.+. +.|+ +..+.+.+|+..
T Consensus 201 ~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~ 239 (242)
T KOG3043|consen 201 KTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKH 239 (242)
T ss_pred EEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 999999997663 4443 344555666543
No 141
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.69 E-value=2.5e-06 Score=79.31 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=43.0
Q ss_pred CCccEEEEEcCCCCccCHHHHHHHHh----hC-CCCeEEEecCCCCCCc-ccChHHHHHHHHHHhcC
Q 016103 332 GSVRRFYIETPEDNAIPIALQQSMIN----SS-PPEKVFRLKGADHSPF-FSKPQALHKLLVEISKL 392 (395)
Q Consensus 332 ~~~PvliI~G~~D~~vp~~~~~~l~~----~l-~~~~~~~i~~~GH~~~-~e~p~~v~~~I~~fl~~ 392 (395)
.++|+++.+|..|.++|....+.+.+ .- .++++..+++.+|... ...-......|.+-+..
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRFAG 284 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHHCC
Confidence 36899999999999999887765544 33 3567888899999754 23334455666655543
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.67 E-value=2.2e-08 Score=94.37 Aligned_cols=108 Identities=19% Similarity=0.322 Sum_probs=63.5
Q ss_pred CCCCCeEEEEcCCCCCh--hhH-HHHHHHHH-h--CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH----CC
Q 016103 138 DLETNHFVLVHGGGFGA--WCW-YKTIALLE-E--GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK----LP 207 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~--~~~-~~~~~~L~-~--~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~----l~ 207 (395)
+...|++|++|||..+. ..| ..+.+.|. . .++.||++||...-.... ...........+.|..+|.. .+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y-~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNY-PQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-H-HHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccc-cchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 55789999999997777 345 44555444 3 479999999953211100 00001122233333333333 23
Q ss_pred CC-CcEEEEEeChhHHHHHHHHHHCCC--CcceEEEEccccc
Q 016103 208 DA-EKVILVGHDFGGACISYAMELFPF--KISKAVFIAAAML 246 (395)
Q Consensus 208 ~~-~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~~ 246 (395)
++ ++++|||||+||++|-.++..... +|..++.++|+.+
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 32 599999999999999999999887 8999999999865
No 143
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=4.8e-07 Score=88.49 Aligned_cols=205 Identities=15% Similarity=0.108 Sum_probs=127.2
Q ss_pred CCCCCeEEEEcCCCCCh-----hhHHHH--HHHHHhCCCEEEEEcCCCCCCCCCC-------CCCccChhhhHHHHHHHH
Q 016103 138 DLETNHFVLVHGGGFGA-----WCWYKT--IALLEEGGFKVTAIDLTGAGIHSFD-------TNGITSLSQYVKPLTDFL 203 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~-----~~~~~~--~~~L~~~G~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~l~~~l 203 (395)
+.+-|+|+++-|.++-. ..|-.. ...|++.||.|+++|-||.-..... .-+...++|.++-+..+.
T Consensus 639 gkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 639 GKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 34468999999987533 223222 3478899999999999997554321 123457889999999888
Q ss_pred HHCCCC--CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCC--cchhHHhhhcCCchHHHHHHHHHHhhcCCC
Q 016103 204 EKLPDA--EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNG--QNLLDMFSQQTGSTDLMRQAQIFLYANGNN 279 (395)
Q Consensus 204 ~~l~~~--~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
++.|.- .+|.|-|||+||++++....++|+.++..|.=+|...... ....+.+...+
T Consensus 719 eq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYMg~P------------------- 779 (867)
T KOG2281|consen 719 EQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYMGYP------------------- 779 (867)
T ss_pred HhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhcCCC-------------------
Confidence 887431 3999999999999999999999997666665444322110 00000000000
Q ss_pred CCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHH---
Q 016103 280 KPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMI--- 356 (395)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~--- 356 (395)
......+ .........+++. ...-..|++||--|.-|.......+.
T Consensus 780 -------------------~~nE~gY-------~agSV~~~Veklp-----depnRLlLvHGliDENVHF~Hts~Lvs~l 828 (867)
T KOG2281|consen 780 -------------------DNNEHGY-------GAGSVAGHVEKLP-----DEPNRLLLVHGLIDENVHFAHTSRLVSAL 828 (867)
T ss_pred -------------------ccchhcc-------cchhHHHHHhhCC-----CCCceEEEEecccccchhhhhHHHHHHHH
Confidence 0000000 0001111222222 11245799999999999876655444
Q ss_pred -hhCCCCeEEEecCCCCCCcc-cChHHHHHHHHHHhcC
Q 016103 357 -NSSPPEKVFRLKGADHSPFF-SKPQALHKLLVEISKL 392 (395)
Q Consensus 357 -~~l~~~~~~~i~~~GH~~~~-e~p~~v~~~I~~fl~~ 392 (395)
+..+..++.++|+--|.+-- |.-.-....|..||++
T Consensus 829 vkagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 829 VKAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred HhCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 44456699999999998753 3334566778888764
No 144
>PLN02606 palmitoyl-protein thioesterase
Probab=98.59 E-value=2.7e-06 Score=77.70 Aligned_cols=102 Identities=18% Similarity=0.192 Sum_probs=72.9
Q ss_pred CCCeEEEEcCCC--CChhhHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-CCCCcEEEE
Q 016103 140 ETNHFVLVHGGG--FGAWCWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-PDAEKVILV 215 (395)
Q Consensus 140 ~~~~vv~~HG~~--~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lv 215 (395)
..-|||+.||+| ++...+..+.+.+.+. |+.+..+. .|-+.. ......+.+.++.+.+.|... .+..-+++|
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~---~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ---DSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc---cccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 345899999999 5556788888888633 67666665 333321 112245667777666666543 122479999
Q ss_pred EeChhHHHHHHHHHHCCC--CcceEEEEcccc
Q 016103 216 GHDFGGACISYAMELFPF--KISKAVFIAAAM 245 (395)
Q Consensus 216 GhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~ 245 (395)
|+|.||.++-.++.++|+ .|+.+|.++++.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 999999999999999987 599999999874
No 145
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.58 E-value=6.3e-08 Score=85.87 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHC-CCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 195 YVKPLTDFLEKL-PDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 195 ~~~~l~~~l~~l-~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+.+...++|... .++ ++|.|+|.|.||-+|+.+|..+| .|+.+|.+++...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344455555544 332 59999999999999999999999 6999999998754
No 146
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.57 E-value=8.3e-06 Score=78.75 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=59.9
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC---CCC-CcEEEEEeChhHHHHHHHHHHCCCCc
Q 016103 160 TIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---PDA-EKVILVGHDFGGACISYAMELFPFKI 235 (395)
Q Consensus 160 ~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V 235 (395)
+--.|.. |+.|+.+.+.- .+....++++.+.....+++.+ ..+ .+++|||.|.||..++.+|+.+|+.+
T Consensus 93 vG~AL~~-GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHc-CCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 4445655 89999887741 2223368888887777777654 221 38999999999999999999999999
Q ss_pred ceEEEEccccc
Q 016103 236 SKAVFIAAAML 246 (395)
Q Consensus 236 ~~lVli~~~~~ 246 (395)
.-+|+-+++..
T Consensus 166 gplvlaGaPls 176 (581)
T PF11339_consen 166 GPLVLAGAPLS 176 (581)
T ss_pred CceeecCCCcc
Confidence 88888877654
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.53 E-value=3.9e-06 Score=73.71 Aligned_cols=104 Identities=23% Similarity=0.220 Sum_probs=72.9
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCC-----CEEEEEcCCCC----CCCCCCC----------CCccChhhhHHHHHHH
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGG-----FKVTAIDLTGA----GIHSFDT----------NGITSLSQYVKPLTDF 202 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G-----~~v~~~d~~G~----G~s~~~~----------~~~~~~~~~~~~l~~~ 202 (395)
-|.||+||.++++.+...++..|...+ --++.+|--|. |.-+... ....+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378999999999999999999998863 13666666662 1111110 1123445555555555
Q ss_pred HH----HCCCCCcEEEEEeChhHHHHHHHHHHCCC-----CcceEEEEccccc
Q 016103 203 LE----KLPDAEKVILVGHDFGGACISYAMELFPF-----KISKAVFIAAAML 246 (395)
Q Consensus 203 l~----~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-----~V~~lVli~~~~~ 246 (395)
+. +.+++ ++.+|||||||.....++..+.. .+.++|.++++.-
T Consensus 126 msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 54 45786 99999999999999998887532 3899999998753
No 148
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.52 E-value=2e-05 Score=71.34 Aligned_cols=216 Identities=14% Similarity=0.175 Sum_probs=119.9
Q ss_pred EEEEcCC-CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCC--cEEEEEeChh
Q 016103 144 FVLVHGG-GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAE--KVILVGHDFG 220 (395)
Q Consensus 144 vv~~HG~-~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~--~v~lvGhS~G 220 (395)
+|++=|| +..........+...+.|+.++.+-.+-....... ..+...++.+...+......+ ++++-.+|.|
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnG 77 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS----KRLAPAADKLLELLSDSQSASPPPILFHSFSNG 77 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec----cchHHHHHHHHHHhhhhccCCCCCEEEEEEECc
Confidence 5555577 55556777777777778999999987643222111 345566666666666554322 7999999998
Q ss_pred HHHHHHHHHH-----C-----CCCcceEEEEcccccCCCcchhHHhhhcCCchH---H--HHHHHHHHhhcCCCCCCcch
Q 016103 221 GACISYAMEL-----F-----PFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTD---L--MRQAQIFLYANGNNKPPTAI 285 (395)
Q Consensus 221 g~~a~~~a~~-----~-----p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~ 285 (395)
|...+..... . -.+++++|+-+++...........+........ . .......+.
T Consensus 78 G~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 146 (240)
T PF05705_consen 78 GSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLL----------- 146 (240)
T ss_pred hHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHH-----------
Confidence 8876655431 1 123889998888765443333333322211110 0 000000000
Q ss_pred hhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC----C
Q 016103 286 DLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP----P 361 (395)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~----~ 361 (395)
................. . ..+.+.........+|.|+|+++.|.+++.+..++..+... .
T Consensus 147 --~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~ 210 (240)
T PF05705_consen 147 --RLSIISYFIFGYPDVQE--Y------------YRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWD 210 (240)
T ss_pred --HHHHHHHHHhcCCcHHH--H------------HHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCe
Confidence 00000000000000000 0 00001111112235899999999999999887766654332 3
Q ss_pred CeEEEecCCCCCCcc-cChHHHHHHHHHHh
Q 016103 362 EKVFRLKGADHSPFF-SKPQALHKLLVEIS 390 (395)
Q Consensus 362 ~~~~~i~~~GH~~~~-e~p~~v~~~I~~fl 390 (395)
++...++++.|..++ ++|++..+.+.+|+
T Consensus 211 V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 211 VRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred EEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 677888999998775 57999999999885
No 149
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.50 E-value=1.2e-06 Score=78.72 Aligned_cols=107 Identities=17% Similarity=0.149 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcCCCCChhhH-HHHHHHHHhCCC--EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCC
Q 016103 138 DLETNHFVLVHGGGFGAWCW-YKTIALLEEGGF--KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAE 210 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~-~~~~~~L~~~G~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~ 210 (395)
..++..+||+||+..+...- ...++.....|| .++++.||..|.-..-.....+...-...+..+|..+ +. .
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~-~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI-K 93 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-c
Confidence 35678999999998876543 333333333233 7999999988753221111122333334555555543 45 4
Q ss_pred cEEEEEeChhHHHHHHHHHH----CC-----CCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMEL----FP-----FKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~----~p-----~~V~~lVli~~~~ 245 (395)
+|+|++||||+.+.+.+... .+ .++..+||++|-.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 99999999999999887654 11 2578888888754
No 150
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.41 E-value=1.2e-05 Score=78.81 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=69.8
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHH-------------------HHHhCCCEEEEEcCC-CCCCCCCCCCC--ccChhhh
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIA-------------------LLEEGGFKVTAIDLT-GAGIHSFDTNG--ITSLSQY 195 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~-------------------~L~~~G~~v~~~d~~-G~G~s~~~~~~--~~~~~~~ 195 (395)
..+.|+||++.|.++.+..|..+.+ .+.+. ..++.+|.| |.|.|...... ..+.++.
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~ 115 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQA 115 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHH
Confidence 4567999999999988888754432 11222 679999977 99999654332 3467778
Q ss_pred HHHHHHHHHHC-------CCCCcEEEEEeChhHHHHHHHHHH----C------CCCcceEEEEccccc
Q 016103 196 VKPLTDFLEKL-------PDAEKVILVGHDFGGACISYAMEL----F------PFKISKAVFIAAAML 246 (395)
Q Consensus 196 ~~~l~~~l~~l-------~~~~~v~lvGhS~Gg~~a~~~a~~----~------p~~V~~lVli~~~~~ 246 (395)
++++..+|... .- .+++|.|-|+||..+-.+|.. . +-.++++++.++...
T Consensus 116 a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~d 182 (415)
T PF00450_consen 116 AEDLYEFLQQFFQKFPEYRS-NPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWID 182 (415)
T ss_dssp HHHHHHHHHHHHHHSGGGTT-SEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SB
T ss_pred HHHHHHHHHHhhhhhhhccC-CCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccc
Confidence 88777777653 22 499999999999977666543 3 234789999888764
No 151
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.41 E-value=7.7e-07 Score=84.46 Aligned_cols=102 Identities=25% Similarity=0.261 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFK---VTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
.-++|++||++.+...|..+...+...|+. ++.+++++... ........+++...|.+++.+.+.. ++.|+||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~ql~~~V~~~l~~~ga~-~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDG---TYSLAVRGEQLFAYVDEVLAKTGAK-KVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCC---CccccccHHHHHHHHHHHHhhcCCC-ceEEEee
Confidence 348999999988999999988888888887 99999986621 1122345666777888888888885 9999999
Q ss_pred ChhHHHHHHHHHHCC--CCcceEEEEccccc
Q 016103 218 DFGGACISYAMELFP--FKISKAVFIAAAML 246 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p--~~V~~lVli~~~~~ 246 (395)
|+||.+...++..++ .+|+.++.++++-.
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 999999999999988 78999999998753
No 152
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.40 E-value=1.1e-06 Score=80.15 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=73.5
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC-CcEEEEEeC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA-EKVILVGHD 218 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS 218 (395)
+...|||+-|..+--+. .+...=++.||.|+.+++||++.|...+....+....-.-+...+..|+.. +.++|.|||
T Consensus 242 gq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred CceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 35678888886443221 122223344899999999999999876544444444333445556777764 689999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEccc
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAA 244 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~ 244 (395)
.||..++.+|..||+ |+++||-+++
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecch
Confidence 999999999999998 9999998775
No 153
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.37 E-value=1.5e-06 Score=77.42 Aligned_cols=88 Identities=18% Similarity=0.232 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhC--CCEEEEEcCCCCCCCCCCCCCccChhhhHH----HHHHHHHHCCCC-CcE
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEG--GFKVTAIDLTGAGIHSFDTNGITSLSQYVK----PLTDFLEKLPDA-EKV 212 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~--G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~----~l~~~l~~l~~~-~~v 212 (395)
+...|||+||+.++...|..+...|... .+.-..+...++..... ....+++..++ .|.+.++..... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~--~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEF--KTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhccccccc--ccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 4458999999999999999888877761 12212222222221111 11234555444 444444333332 489
Q ss_pred EEEEeChhHHHHHHHHH
Q 016103 213 ILVGHDFGGACISYAME 229 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~ 229 (395)
.+|||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999876655
No 154
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.35 E-value=2.5e-05 Score=76.07 Aligned_cols=107 Identities=16% Similarity=0.166 Sum_probs=66.1
Q ss_pred CCCCeEEEEcCCCCCh-hhHHHHHHHHHhCC----CEEEEEcCCCC-CCCCCCCCCccChhhhHHHHHHHHHHC-CC---
Q 016103 139 LETNHFVLVHGGGFGA-WCWYKTIALLEEGG----FKVTAIDLTGA-GIHSFDTNGITSLSQYVKPLTDFLEKL-PD--- 208 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~-~~~~~~~~~L~~~G----~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~--- 208 (395)
..-|+|+++||-.... .....++..|...| ..|+.+|..+. .++..-.....-...++++|.-++++. ..
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 4568999999953211 11233445555555 34677775321 111100111111233445666666653 21
Q ss_pred CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 209 AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 209 ~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
.++.+|+|+||||+.|+.++.++|+.+.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 1478999999999999999999999999999999864
No 155
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.35 E-value=9.1e-06 Score=69.90 Aligned_cols=102 Identities=26% Similarity=0.298 Sum_probs=79.0
Q ss_pred CCeEEEEcCCCCChh---hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC---CcEEE
Q 016103 141 TNHFVLVHGGGFGAW---CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA---EKVIL 214 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~---~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~---~~v~l 214 (395)
.-.|||+-|++..-- .-..+...|.+.+|.++-+.++- +....+..++.+.++|+..+++|++.. ..|+|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~S----sy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRS----SYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccc----cccccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 457999999987664 34678889999999999998863 222234468899999999999987442 48999
Q ss_pred EEeChhHHHHHHHHH--HCCCCcceEEEEccccc
Q 016103 215 VGHDFGGACISYAME--LFPFKISKAVFIAAAML 246 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~--~~p~~V~~lVli~~~~~ 246 (395)
+|||.|+.-.+++.. ..+..|...|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 999999998888873 24667888888887653
No 156
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.31 E-value=6.1e-05 Score=68.98 Aligned_cols=103 Identities=16% Similarity=0.182 Sum_probs=72.5
Q ss_pred CCCCeEEEEcCCCCChh--hHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-CCCCcEEE
Q 016103 139 LETNHFVLVHGGGFGAW--CWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-PDAEKVIL 214 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~--~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~l 214 (395)
...-|||+.||+|++.. ....+.+.+.+. |..+.++.. |-+. .......+.+.++.+.+.+... .+..-+++
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~---~~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGV---GDSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCc---cccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 34468999999988765 445555555442 677777765 3221 1223345677777776666553 12247999
Q ss_pred EEeChhHHHHHHHHHHCCC--CcceEEEEcccc
Q 016103 215 VGHDFGGACISYAMELFPF--KISKAVFIAAAM 245 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~ 245 (395)
||+|.||.++-.++.+.|+ .|+.+|.++++.
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999999987 599999999864
No 157
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.28 E-value=1e-05 Score=78.92 Aligned_cols=174 Identities=16% Similarity=0.185 Sum_probs=108.0
Q ss_pred CCCeEEEEcCCC----CChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH--------
Q 016103 140 ETNHFVLVHGGG----FGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK-------- 205 (395)
Q Consensus 140 ~~~~vv~~HG~~----~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~-------- 205 (395)
..|.+|++||.+ .+.+ .|+.......+. ..|.++|++.- .+..++...++.+..+...
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gev-vev~tfdl~n~-------igG~nI~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEV-VEVPTFDLNNP-------IGGANIKHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhcee-eeeccccccCC-------CCCcchHHHHHHHHHHhhhhhhhhhcc
Confidence 357899999987 1112 344444433333 56777887621 1113555555555555442
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHHCC-CCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcc
Q 016103 206 LPDAEKVILVGHDFGGACISYAMELFP-FKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTA 284 (395)
Q Consensus 206 l~~~~~v~lvGhS~Gg~~a~~~a~~~p-~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (395)
+.. .+++|+|.|||+.++........ ..|.++|.++-+....... .
T Consensus 247 fph-a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp-------------------------------r- 293 (784)
T KOG3253|consen 247 FPH-APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP-------------------------------R- 293 (784)
T ss_pred CCC-CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-------------------------------c-
Confidence 233 59999999999888877766433 2388888887554221100 0
Q ss_pred hhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhCC-CCe
Q 016103 285 IDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSSP-PEK 363 (395)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l~-~~~ 363 (395)
.+.++.+ - ..+.|+|||.|..|..+++...++++++.. ..+
T Consensus 294 -girDE~L-----------------------------l--------dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~e 335 (784)
T KOG3253|consen 294 -GIRDEAL-----------------------------L--------DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVE 335 (784)
T ss_pred -CCcchhh-----------------------------H--------hcCCceEEEecCCcccCCHHHHHHHHHHhhccce
Confidence 0000000 0 125899999999999999999999988775 458
Q ss_pred EEEecCCCCCCcccC---------hH----HHHHHHHHHhcC
Q 016103 364 VFRLKGADHSPFFSK---------PQ----ALHKLLVEISKL 392 (395)
Q Consensus 364 ~~~i~~~GH~~~~e~---------p~----~v~~~I~~fl~~ 392 (395)
++++.+++|.+-.-. .. .+.++|.+|+..
T Consensus 336 lhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~efvt~ 377 (784)
T KOG3253|consen 336 LHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEFVTI 377 (784)
T ss_pred EEEecCCCccccCCccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999876643 12 355666666543
No 158
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.25 E-value=5.2e-05 Score=66.29 Aligned_cols=82 Identities=16% Similarity=0.231 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCE-EEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFK-VTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+...|||..|||.+...+.++. +.+ ++. ++++|++... ++. + + -+. +.+.|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~~-~~D~l~~yDYr~l~-----------~d~---~----~--~~y-~~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LPE-NYDVLICYDYRDLD-----------FDF---D----L--SGY-REIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CCC-CccEEEEecCcccc-----------ccc---c----c--ccC-ceEEEEEEe
Confidence 3579999999999999887663 122 344 5677876321 110 1 1 133 499999999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEcccccC
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAMLT 247 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~~ 247 (395)
||-.+|..+....| ++..|.|++...+
T Consensus 66 mGVw~A~~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 66 MGVWAANRVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHHhccCC--cceeEEEECCCCC
Confidence 99999988766543 7788888887643
No 159
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.18 E-value=1.5e-05 Score=71.93 Aligned_cols=107 Identities=17% Similarity=0.160 Sum_probs=75.4
Q ss_pred CCCCeEEEEcCCCCChhhHHHHH--HHHHh-CCCEEEEEcC-CCC------CCCCCCC---CCccChhhhHHHHHHHHHH
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTI--ALLEE-GGFKVTAIDL-TGA------GIHSFDT---NGITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~--~~L~~-~G~~v~~~d~-~G~------G~s~~~~---~~~~~~~~~~~~l~~~l~~ 205 (395)
...|.||++||..++........ +.|++ .||-|+.+|- +++ +.+..+. ....+...+.+.+..++.+
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~ 138 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNE 138 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHh
Confidence 34489999999998887655543 44444 5899999952 222 2221111 1223344455566666666
Q ss_pred CCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 206 LPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 206 l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
.+++ ++|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 139 ~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 139 YGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 6775 699999999999999999999999999999988865
No 160
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.15 E-value=0.00032 Score=65.77 Aligned_cols=105 Identities=13% Similarity=0.121 Sum_probs=71.2
Q ss_pred CCeEEEEcCCCCChh---hHHHHHHHHHhCCCEEEEEcCCCC--CCCCC--------------CCCCc------------
Q 016103 141 TNHFVLVHGGGFGAW---CWYKTIALLEEGGFKVTAIDLTGA--GIHSF--------------DTNGI------------ 189 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~---~~~~~~~~L~~~G~~v~~~d~~G~--G~s~~--------------~~~~~------------ 189 (395)
.-.||++||.+.++. ....+...|.++|+.++.+.+|.- ..... .....
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 348999999987763 567788899999999999999871 10000 00000
Q ss_pred cCh----hhh---HHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC-CcceEEEEccccc
Q 016103 190 TSL----SQY---VKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF-KISKAVFIAAAML 246 (395)
Q Consensus 190 ~~~----~~~---~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-~V~~lVli~~~~~ 246 (395)
... +.+ .+.+..++...+.. +++||||+.|++.++.+....+. .+.+||+|++..+
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 001 112 22333344444543 69999999999999999888764 5999999999754
No 161
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.14 E-value=0.00015 Score=68.59 Aligned_cols=106 Identities=19% Similarity=0.247 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCCCChhh-------HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCc
Q 016103 139 LETNHFVLVHGGGFGAWC-------WYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEK 211 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~-------~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~ 211 (395)
...|+||++||+|..-.. ...+...|. ...++++|+.-...-.....-+..+.+.++....+++..|.+ +
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~-n 196 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK-N 196 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC-e
Confidence 356999999998654432 222333444 368999998644311111122345777777778888777875 9
Q ss_pred EEEEEeChhHHHHHHHHHHC--CC---CcceEEEEcccccC
Q 016103 212 VILVGHDFGGACISYAMELF--PF---KISKAVFIAAAMLT 247 (395)
Q Consensus 212 v~lvGhS~Gg~~a~~~a~~~--p~---~V~~lVli~~~~~~ 247 (395)
++|+|-|.||.+++.+.... ++ .-+++|+++|....
T Consensus 197 I~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 197 IILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999999999887642 11 24799999998654
No 162
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.11 E-value=2.9e-05 Score=76.81 Aligned_cols=118 Identities=15% Similarity=0.065 Sum_probs=80.7
Q ss_pred cccccccCCC--CCCCeEEEEcCCCCChh---hH--HHHHH---HHHhCCCEEEEEcCCCCCCCCCCCCCccC-hhhhHH
Q 016103 129 NLNRDEKLPD--LETNHFVLVHGGGFGAW---CW--YKTIA---LLEEGGFKVTAIDLTGAGIHSFDTNGITS-LSQYVK 197 (395)
Q Consensus 129 ~~~~~~~~~~--~~~~~vv~~HG~~~~~~---~~--~~~~~---~L~~~G~~v~~~d~~G~G~s~~~~~~~~~-~~~~~~ 197 (395)
.|..+++... +..|+++..+=++-... .+ ..... .++.+||.|+..|.||.|.|+.......+ -.+..-
T Consensus 31 rL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~ 110 (563)
T COG2936 31 RLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAEDGY 110 (563)
T ss_pred EEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceeccccccchh
Confidence 3355555554 56688888882222222 11 22233 57888999999999999999876655444 222333
Q ss_pred HHHHHHHHCCC-CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 198 PLTDFLEKLPD-AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 198 ~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
|+.++|..... +.+|..+|.|++|...+++|+..|..++.++...+...
T Consensus 111 D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 111 DTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred HHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 66666665532 25999999999999999999998887888887777643
No 163
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.05 E-value=1.6e-05 Score=72.39 Aligned_cols=110 Identities=14% Similarity=0.124 Sum_probs=67.2
Q ss_pred CCCCCCeEEEEcCCCCChhhH--HHHHHHHHhCC----CEEEEEcCCCCCCCCC--C--------CCCc---cCh-hhhH
Q 016103 137 PDLETNHFVLVHGGGFGAWCW--YKTIALLEEGG----FKVTAIDLTGAGIHSF--D--------TNGI---TSL-SQYV 196 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~--~~~~~~L~~~G----~~v~~~d~~G~G~s~~--~--------~~~~---~~~-~~~~ 196 (395)
....-|+|+++||.......+ ...+..+...| .-+|+++..+.+.... . .... ... ..+.
T Consensus 20 ~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 99 (251)
T PF00756_consen 20 PSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLT 99 (251)
T ss_dssp TTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHH
T ss_pred CCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehh
Confidence 345568999999972222222 22333333332 4567777655541110 0 0011 112 2334
Q ss_pred HHHHHHHHH-CCCCC-cEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 197 KPLTDFLEK-LPDAE-KVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 197 ~~l~~~l~~-l~~~~-~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++|..+|+. +.... +..|+|+||||+.|+.++.++|+.+.+++.+++...
T Consensus 100 ~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALD 151 (251)
T ss_dssp THHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESE
T ss_pred ccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccc
Confidence 566666654 34331 379999999999999999999999999999998754
No 164
>PLN02209 serine carboxypeptidase
Probab=98.05 E-value=0.0004 Score=68.15 Aligned_cols=61 Identities=16% Similarity=0.182 Sum_probs=49.0
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhC------------------------CC-CeEEEecCCCCCCcccChHHHHHHHH
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSS------------------------PP-EKVFRLKGADHSPFFSKPQALHKLLV 387 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l------------------------~~-~~~~~i~~~GH~~~~e~p~~v~~~I~ 387 (395)
.++||+..|+.|.+|+.-..+.+.+.+ .+ .+++.|.+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 489999999999999976665555443 12 46777889999996 69999999999
Q ss_pred HHhcCCC
Q 016103 388 EISKLPS 394 (395)
Q Consensus 388 ~fl~~~~ 394 (395)
.|+...+
T Consensus 430 ~fi~~~~ 436 (437)
T PLN02209 430 RWISGQP 436 (437)
T ss_pred HHHcCCC
Confidence 9997643
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.00 E-value=5.1e-05 Score=74.96 Aligned_cols=107 Identities=19% Similarity=0.152 Sum_probs=69.0
Q ss_pred CCCeEEEEcCCCCChhhH--HHHHHHHHh-CCCEEEEEcCCCCCCCCCCC------CCccChhhhHHHHHHHHHHCC---
Q 016103 140 ETNHFVLVHGGGFGAWCW--YKTIALLEE-GGFKVTAIDLTGAGIHSFDT------NGITSLSQYVKPLTDFLEKLP--- 207 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~--~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~l~~~l~~l~--- 207 (395)
++|++|++-|=+.-...| ..+...|++ .|-.|++++||-+|.|.... -...+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 377777775544332222 224444544 47789999999999996421 134677888888888887652
Q ss_pred ---CCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 208 ---DAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 208 ---~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
.+.+++++|-|+||++|..+-.+||+.|.+.+..+++..
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 224899999999999999999999999999999988764
No 166
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.94 E-value=6.2e-05 Score=69.46 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=61.6
Q ss_pred CCCCCeEEEEcCCCCChhhH-------HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----
Q 016103 138 DLETNHFVLVHGGGFGAWCW-------YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---- 206 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~-------~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---- 206 (395)
..+...||++-|.++.-+.. ..+.+...+.|.+|+++++||.|.|.+.. +.++++.+-.+.++.|
T Consensus 134 a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~ 209 (365)
T PF05677_consen 134 AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEE 209 (365)
T ss_pred CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhcc
Confidence 45677999999987665541 12333333457899999999999997655 3455555443333333
Q ss_pred -CCC-CcEEEEEeChhHHHHHHHHHHC
Q 016103 207 -PDA-EKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 207 -~~~-~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
|++ +++++.|||+||.++.+++..+
T Consensus 210 ~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 210 QGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCChheEEEeeccccHHHHHHHHHhc
Confidence 332 4899999999999998876654
No 167
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.93 E-value=3.4e-05 Score=59.90 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=54.9
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccChHHHHHHHHHHhcC
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSKPQALHKLLVEISKL 392 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~p~~v~~~I~~fl~~ 392 (395)
..|+|+|.++.|+++|.+..+.+++.+++++++++++.||..+...-.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 489999999999999999999999999999999999999999875567788999999864
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.91 E-value=9.8e-05 Score=68.26 Aligned_cols=225 Identities=20% Similarity=0.199 Sum_probs=116.1
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC---------ccC--------hhhhHHHHHH
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNG---------ITS--------LSQYVKPLTD 201 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~---------~~~--------~~~~~~~l~~ 201 (395)
..-|.+++.||++.....-...+..++..++.++..+...+|.+...... ... ......+...
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred ccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 45678999999998888766677888888888888875333322111100 000 0000111111
Q ss_pred HHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--CcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCC
Q 016103 202 FLEKLPDAEKVILVGHDFGGACISYAMELFPF--KISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNN 279 (395)
Q Consensus 202 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (395)
... .. .+....|+++|+..+..++...+. ....++.+........ ......... .........+......
T Consensus 127 ~~~--~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~ 198 (299)
T COG1073 127 LGA--SL-GPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGAL--ALLLLGANP---ELARELIDYLITPGGF 198 (299)
T ss_pred Hhh--hc-CcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCcee--eccccccch---HHHHhhhhhhccCCCC
Confidence 111 12 388999999999999999887763 2333333333221100 000000000 0011111111110000
Q ss_pred CCC--cchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHh
Q 016103 280 KPP--TAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMIN 357 (395)
Q Consensus 280 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~ 357 (395)
... ........ . .. ...+...+.......+. .+|+|+++|.+|.++|......+.+
T Consensus 199 ~~~~~~~~~~~~~----------~----~~-~~~~~~~d~~~~~~~i~-------~~P~l~~~G~~D~~vp~~~~~~~~~ 256 (299)
T COG1073 199 APLPAPEAPLDTL----------P----LR-AVLLLLLDPFDDAEKIS-------PRPVLLVHGERDEVVPLRDAEDLYE 256 (299)
T ss_pred CCCCccccccccc----------c----cc-hhhhccCcchhhHhhcC-------CcceEEEecCCCcccchhhhHHHHh
Confidence 000 00000000 0 00 00011112222222221 2799999999999999999888887
Q ss_pred hCCC--CeEEEecCCCCCCcccChH---HHHHHHHHHhcCC
Q 016103 358 SSPP--EKVFRLKGADHSPFFSKPQ---ALHKLLVEISKLP 393 (395)
Q Consensus 358 ~l~~--~~~~~i~~~GH~~~~e~p~---~v~~~I~~fl~~~ 393 (395)
.... .+..++++++|......+. +....+.+|+.+.
T Consensus 257 ~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 257 AARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred hhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 7665 5778888899988865444 6778888888653
No 169
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.90 E-value=0.0023 Score=62.80 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=48.9
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhCC------------------------C-CeEEEecCCCCCCcccChHHHHHHHH
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSSP------------------------P-EKVFRLKGADHSPFFSKPQALHKLLV 387 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l~------------------------~-~~~~~i~~~GH~~~~e~p~~v~~~I~ 387 (395)
.++||+..|+.|.+||.-..+.+.+.+. + .++++|.++||+++ .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 5899999999999999776665554431 2 45778889999996 59999999999
Q ss_pred HHhcCCC
Q 016103 388 EISKLPS 394 (395)
Q Consensus 388 ~fl~~~~ 394 (395)
.|+...+
T Consensus 426 ~Fi~~~~ 432 (433)
T PLN03016 426 RWISGQP 432 (433)
T ss_pred HHHcCCC
Confidence 9997653
No 170
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.90 E-value=8.2e-05 Score=63.66 Aligned_cols=109 Identities=19% Similarity=0.156 Sum_probs=72.4
Q ss_pred CCCCCeEEEEcCCCCChhhHHH---HHHHHHhCCCEEEEEcCCCCCCCCCCC---------------------CCccChh
Q 016103 138 DLETNHFVLVHGGGFGAWCWYK---TIALLEEGGFKVTAIDLTGAGIHSFDT---------------------NGITSLS 193 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~---~~~~L~~~G~~v~~~d~~G~G~s~~~~---------------------~~~~~~~ 193 (395)
+..-|++.++-|+.++.+.|-. +-+.-.++|+.|++||---.|-.-... ...+.+-
T Consensus 41 ~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMY 120 (283)
T KOG3101|consen 41 GKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMY 120 (283)
T ss_pred CCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHH
Confidence 4446899999999999887632 444556789999999964333221000 0001222
Q ss_pred hh-HHHHHHHHHH----CCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccC
Q 016103 194 QY-VKPLTDFLEK----LPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLT 247 (395)
Q Consensus 194 ~~-~~~l~~~l~~----l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~ 247 (395)
++ ++.+.++++. +.. .++.|.||||||+-|+..+.+.|.+.+++-.++|...+
T Consensus 121 dYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 121 DYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 22 2345555542 233 38999999999999999999999988888887776543
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.87 E-value=5.6e-05 Score=73.31 Aligned_cols=83 Identities=24% Similarity=0.412 Sum_probs=61.6
Q ss_pred hHHHHHHHHHhCCCE-----EEE-EcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC---CCCCcEEEEEeChhHHHHHH
Q 016103 156 CWYKTIALLEEGGFK-----VTA-IDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL---PDAEKVILVGHDFGGACISY 226 (395)
Q Consensus 156 ~~~~~~~~L~~~G~~-----v~~-~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~ 226 (395)
.|..+++.|.+.||. ..+ +|+|=. . ...+++...+...++.. . +++|+||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~-------~--~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLS-------P--AERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhc-------h--hhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHH
Confidence 899999999998875 223 788721 1 13446666666666553 3 369999999999999999
Q ss_pred HHHHCCC------CcceEEEEcccccCC
Q 016103 227 AMELFPF------KISKAVFIAAAMLTN 248 (395)
Q Consensus 227 ~a~~~p~------~V~~lVli~~~~~~~ 248 (395)
+....+. .|+++|.++++....
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9988753 599999999986543
No 172
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.84 E-value=0.00013 Score=67.84 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=67.7
Q ss_pred CCCCCeEEEEcCCCCChh-hHHHHHHHHHhCC--CEEEEEcCCCCCCCCCCCC----CccChhhhHHHHHHHHHHCCCCC
Q 016103 138 DLETNHFVLVHGGGFGAW-CWYKTIALLEEGG--FKVTAIDLTGAGIHSFDTN----GITSLSQYVKPLTDFLEKLPDAE 210 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~-~~~~~~~~L~~~G--~~v~~~d~~G~G~s~~~~~----~~~~~~~~~~~l~~~l~~l~~~~ 210 (395)
...+.++||+||+..+-. .-+..++.....| ...+++.||-.|.--.-.. ..++-.++...|..+.+....+
T Consensus 113 s~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~- 191 (377)
T COG4782 113 SSAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVK- 191 (377)
T ss_pred cCCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCc-
Confidence 356779999999976554 3444555554444 5788999996664311111 1233344444444444444564
Q ss_pred cEEEEEeChhHHHHHHHHHH--------CCCCcceEEEEcccc
Q 016103 211 KVILVGHDFGGACISYAMEL--------FPFKISKAVFIAAAM 245 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~--------~p~~V~~lVli~~~~ 245 (395)
+|+|++||||..++++...+ .+.+++-+||-+|-.
T Consensus 192 ~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 192 RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999999987764 234577777776643
No 173
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.81 E-value=0.00014 Score=64.28 Aligned_cols=230 Identities=13% Similarity=0.139 Sum_probs=121.1
Q ss_pred CCCCCeEEEEcCCCCChhhHH-HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHH--------HHHHHH----
Q 016103 138 DLETNHFVLVHGGGFGAWCWY-KTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKP--------LTDFLE---- 204 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~-~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~--------l~~~l~---- 204 (395)
.+.++.-+++-|-|++...=+ .+...+.++|...++++-|-+|....+.. ....-+++.| |.+...
T Consensus 110 QK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q-~~~~Le~vtDlf~mG~A~I~E~~~lf~W 188 (371)
T KOG1551|consen 110 QKMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQ-IIHMLEYVTDLFKMGRATIQEFVKLFTW 188 (371)
T ss_pred cCcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHH-HHHHHHHHHHHHHhhHHHHHHHHHhccc
Confidence 334454455555454443322 35566777789999999999987643221 1111111111 122221
Q ss_pred --HCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCC----C-----cchhHHhhhcCCchHHHHHHHHHH
Q 016103 205 --KLPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTN----G-----QNLLDMFSQQTGSTDLMRQAQIFL 273 (395)
Q Consensus 205 --~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~ 273 (395)
..|.+ +..|+|-||||.+|-.....++..|.-+=++++..... + .+.+..+.+............
T Consensus 189 s~~~g~g-~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p--- 264 (371)
T KOG1551|consen 189 SSADGLG-NLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNP--- 264 (371)
T ss_pred ccccCcc-cceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCc---
Confidence 23665 99999999999999999998887776665555432110 0 000011111111111100000
Q ss_pred hhcCCCCCCcchhhhHHHHH--HHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHH
Q 016103 274 YANGNNKPPTAIDLDKSLLK--ELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIAL 351 (395)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~ 351 (395)
...+.. +........+........+.. ...++.+. .....-=++++.+++|.++|...
T Consensus 265 --------------~Q~~~~~~~~~srn~~~E~~~~Mr~vmd~---~T~v~~fp---~Pvdpsl~ivv~A~~D~Yipr~g 324 (371)
T KOG1551|consen 265 --------------AQSYHLLSKEQSRNSRKESLIFMRGVMDE---CTHVANFP---VPVDPSLIIVVQAKEDAYIPRTG 324 (371)
T ss_pred --------------hhhHHHHHHHhhhcchHHHHHHHHHHHHh---hchhhcCC---CCCCCCeEEEEEecCCccccccC
Confidence 000000 000011111111111111100 00011110 00001125888999999999988
Q ss_pred HHHHHhhCCCCeEEEecCCCCC-CcccChHHHHHHHHHHhcCC
Q 016103 352 QQSMINSSPPEKVFRLKGADHS-PFFSKPQALHKLLVEISKLP 393 (395)
Q Consensus 352 ~~~l~~~l~~~~~~~i~~~GH~-~~~e~p~~v~~~I~~fl~~~ 393 (395)
...+.+..|++++..++ +||. .++.+-+.+...|.+-|++.
T Consensus 325 v~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 325 VRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred cHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 89999999999999999 6996 66778899999999988763
No 174
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.79 E-value=2.7e-05 Score=70.63 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCCCCh---hhHHHHHHHHHhC--CCEEEEEcCCCCCCC-CCCCCCccChhhhHHHHHHHHHHCC-CCCcE
Q 016103 140 ETNHFVLVHGGGFGA---WCWYKTIALLEEG--GFKVTAIDLTGAGIH-SFDTNGITSLSQYVKPLTDFLEKLP-DAEKV 212 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~---~~~~~~~~~L~~~--G~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~l~~~l~~l~-~~~~v 212 (395)
...|||+.||+|++. ..+..+.+.+.+. |..|..++.- -+.+ +....-...+.+.++.+.+.+.... +.+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 445899999999754 3565555544432 7788888872 2211 0000111345666677777776532 22489
Q ss_pred EEEEeChhHHHHHHHHHHCCC-CcceEEEEcccc
Q 016103 213 ILVGHDFGGACISYAMELFPF-KISKAVFIAAAM 245 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~-~V~~lVli~~~~ 245 (395)
++||+|.||.++-.++.++|+ .|..+|.++++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 999999999999999999875 699999999864
No 175
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.79 E-value=0.00022 Score=63.40 Aligned_cols=100 Identities=18% Similarity=0.239 Sum_probs=73.4
Q ss_pred CeEEEEcCCCCChhh--HHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC-CCCCcEEEEEe
Q 016103 142 NHFVLVHGGGFGAWC--WYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL-PDAEKVILVGH 217 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~--~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGh 217 (395)
.|+|++||+++.... ...+.+.+.+. |..|+++|. |-|.- ......+.+.++.+.+.+... .+.+-++++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~---~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIK---DSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcc---hhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 689999999988876 77777777765 788999997 44411 112234566666666555533 22358999999
Q ss_pred ChhHHHHHHHHHHCCC-CcceEEEEcccc
Q 016103 218 DFGGACISYAMELFPF-KISKAVFIAAAM 245 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~-~V~~lVli~~~~ 245 (395)
|.||.++-.++...++ .|..+|.++++.
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 9999999999998765 599999998864
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.78 E-value=3.3e-05 Score=77.59 Aligned_cols=107 Identities=21% Similarity=0.179 Sum_probs=65.5
Q ss_pred CCCCCeEEEEcCCCCCh---hhHHHHHHHHHhC--CCEEEEEcCC-C---CCCCCCC-CCCccChhhhH---HHHHHHHH
Q 016103 138 DLETNHFVLVHGGGFGA---WCWYKTIALLEEG--GFKVTAIDLT-G---AGIHSFD-TNGITSLSQYV---KPLTDFLE 204 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~---~~~~~~~~~L~~~--G~~v~~~d~~-G---~G~s~~~-~~~~~~~~~~~---~~l~~~l~ 204 (395)
....|+||++||.+... ..+ ....|+.. |+.|+.+++| | +...... ......+.|.. +.|.+.++
T Consensus 92 ~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~ 169 (493)
T cd00312 92 GNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIA 169 (493)
T ss_pred CCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 34569999999964322 111 22334433 3899999999 3 3222111 11122333433 44555555
Q ss_pred HCCCC-CcEEEEEeChhHHHHHHHHHH--CCCCcceEEEEccccc
Q 016103 205 KLPDA-EKVILVGHDFGGACISYAMEL--FPFKISKAVFIAAAML 246 (395)
Q Consensus 205 ~l~~~-~~v~lvGhS~Gg~~a~~~a~~--~p~~V~~lVli~~~~~ 246 (395)
..+.+ ++|.|+|+|.||..+..++.. .+..++++|+.++...
T Consensus 170 ~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 170 AFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 55443 599999999999998887764 2346888998887543
No 177
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.75 E-value=0.00013 Score=70.60 Aligned_cols=108 Identities=24% Similarity=0.324 Sum_probs=69.4
Q ss_pred CCCCCeEEEEcCCCC---ChhhHHHHHHHHHhCC-CEEEEEcCC-C-CCCC---CCCCC----CccChhhhH---HHHHH
Q 016103 138 DLETNHFVLVHGGGF---GAWCWYKTIALLEEGG-FKVTAIDLT-G-AGIH---SFDTN----GITSLSQYV---KPLTD 201 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~---~~~~~~~~~~~L~~~G-~~v~~~d~~-G-~G~s---~~~~~----~~~~~~~~~---~~l~~ 201 (395)
..+.|++|+|||.+. +...-..--..|+++| +-|+.+++| | .|.- +.... ....+.|++ +.|.+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 445699999999733 2233233345788887 999999998 2 1211 11100 112344443 46666
Q ss_pred HHHHCCCC-CcEEEEEeChhHHHHHHHHHHCCC---CcceEEEEccccc
Q 016103 202 FLEKLPDA-EKVILVGHDFGGACISYAMELFPF---KISKAVFIAAAML 246 (395)
Q Consensus 202 ~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~---~V~~lVli~~~~~ 246 (395)
-|++.|-+ ++|.|+|+|.||+.++.+.+ .|. .+.++|+.++...
T Consensus 171 NIe~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 77777543 69999999999998887776 354 5778888887664
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.58 E-value=0.0003 Score=71.05 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHh----------------CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHH
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEE----------------GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTD 201 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~----------------~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~ 201 (395)
...+-||+|++|..++-..-+.++..... ..|+..++|+-+ +...-...++.+.++-+.+
T Consensus 86 elsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE----e~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 86 ELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE----EFTAMHGHILLDQTEYVND 161 (973)
T ss_pred cCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc----hhhhhccHhHHHHHHHHHH
Confidence 33467999999998888776666554431 136777777743 1111122456666654444
Q ss_pred HHHH----C-C-------CCCcEEEEEeChhHHHHHHHHHH---CCCCcceEEEEcccc
Q 016103 202 FLEK----L-P-------DAEKVILVGHDFGGACISYAMEL---FPFKISKAVFIAAAM 245 (395)
Q Consensus 202 ~l~~----l-~-------~~~~v~lvGhS~Gg~~a~~~a~~---~p~~V~~lVli~~~~ 245 (395)
.+.. . + ....|+||||||||.+|..++.. .++.|.-++..+++.
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 4433 2 2 12359999999999999887763 345677777777764
No 179
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.54 E-value=0.014 Score=52.79 Aligned_cols=106 Identities=12% Similarity=0.001 Sum_probs=74.4
Q ss_pred CCCCCeEEEEcCCCCC-hhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 138 DLETNHFVLVHGGGFG-AWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~-~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
....|.|+++-...++ +.-.+...+.|... ..|+.-||-.--.-. -..+.++++++++-|.+.+..+|. .+++++
T Consensus 100 r~pdPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp-~~~G~FdldDYIdyvie~~~~~Gp--~~hv~a 175 (415)
T COG4553 100 RKPDPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVP-LEAGHFDLDDYIDYVIEMINFLGP--DAHVMA 175 (415)
T ss_pred cCCCCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceee-cccCCccHHHHHHHHHHHHHHhCC--CCcEEE
Confidence 3345677777766444 45567788888775 789999986432222 123458999999999999999996 477777
Q ss_pred eChhHH-----HHHHHHHHCCCCcceEEEEcccccC
Q 016103 217 HDFGGA-----CISYAMELFPFKISKAVFIAAAMLT 247 (395)
Q Consensus 217 hS~Gg~-----~a~~~a~~~p~~V~~lVli~~~~~~ 247 (395)
.+.=+. +++..+...|..-..+++++++...
T Consensus 176 VCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 176 VCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred EecCCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 776544 4444445567778899999988754
No 180
>COG3150 Predicted esterase [General function prediction only]
Probab=97.52 E-value=0.00059 Score=56.40 Aligned_cols=88 Identities=19% Similarity=0.253 Sum_probs=62.7
Q ss_pred EEEEcCCCCChhhHHHHH--HHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 144 FVLVHGGGFGAWCWYKTI--ALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~--~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
||++||+-+++.+..... +.+... .+.+.+ +.. .-..++...++.|..++..++.. ...|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~i~y-------~~p--~l~h~p~~a~~ele~~i~~~~~~-~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRDIEY-------STP--HLPHDPQQALKELEKAVQELGDE-SPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccceee-------ecC--CCCCCHHHHHHHHHHHHHHcCCC-CceEEeecchH
Confidence 899999998888876533 344443 222222 211 12257888999999999999875 79999999999
Q ss_pred HHHHHHHHHCCCCcceEEEEcccc
Q 016103 222 ACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 222 ~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+.|..++.++- + ..|+++|..
T Consensus 71 Y~At~l~~~~G--i-rav~~NPav 91 (191)
T COG3150 71 YYATWLGFLCG--I-RAVVFNPAV 91 (191)
T ss_pred HHHHHHHHHhC--C-hhhhcCCCc
Confidence 99999999874 3 345566654
No 181
>COG0627 Predicted esterase [General function prediction only]
Probab=97.38 E-value=0.00065 Score=63.52 Aligned_cols=111 Identities=16% Similarity=0.192 Sum_probs=72.6
Q ss_pred CCCCCeEEEEcCCCCChhhH---HHHHHHHHhCCCEEEEEcCC--------------CCCCCCC------CCC-CccChh
Q 016103 138 DLETNHFVLVHGGGFGAWCW---YKTIALLEEGGFKVTAIDLT--------------GAGIHSF------DTN-GITSLS 193 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~---~~~~~~L~~~G~~v~~~d~~--------------G~G~s~~------~~~-~~~~~~ 193 (395)
+..-|+++++||..++...| ..+-....+.|+.++.+|-. |-+.|-. +.. ..+.++
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 34568899999998876443 33445556667888877432 3222210 000 114455
Q ss_pred hhH-HHHHHHHH-HCCCCC---cEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCC
Q 016103 194 QYV-KPLTDFLE-KLPDAE---KVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTN 248 (395)
Q Consensus 194 ~~~-~~l~~~l~-~l~~~~---~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~ 248 (395)
+++ +++-..++ +..... +..|+||||||+-|+.+|.++|+++..+..+++...+.
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 544 45554444 343222 68999999999999999999999999999999876544
No 182
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.38 E-value=0.025 Score=55.47 Aligned_cols=61 Identities=20% Similarity=0.238 Sum_probs=48.8
Q ss_pred ccEEEEEcCCCCccCHHHHHHHHhhC---------C----------------CCeEEEecCCCCCCcccChHHHHHHHHH
Q 016103 334 VRRFYIETPEDNAIPIALQQSMINSS---------P----------------PEKVFRLKGADHSPFFSKPQALHKLLVE 388 (395)
Q Consensus 334 ~PvliI~G~~D~~vp~~~~~~l~~~l---------~----------------~~~~~~i~~~GH~~~~e~p~~v~~~I~~ 388 (395)
.+++|..|+.|.+||.-..+.+.+.+ | +..+..+.|+||++..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999976655543322 1 1345788899999999999999999999
Q ss_pred HhcCCC
Q 016103 389 ISKLPS 394 (395)
Q Consensus 389 fl~~~~ 394 (395)
||...+
T Consensus 444 fl~g~~ 449 (454)
T KOG1282|consen 444 FLNGQP 449 (454)
T ss_pred HHcCCC
Confidence 998643
No 183
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.37 E-value=0.013 Score=55.36 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=47.8
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhCC------------------------C-CeEEEecCCCCCCcccChHHHHHHHH
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSSP------------------------P-EKVFRLKGADHSPFFSKPQALHKLLV 387 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l~------------------------~-~~~~~i~~~GH~~~~e~p~~v~~~I~ 387 (395)
.++||+..|+.|.+|+.-..+.+.+.+. + .+++++.++||+++ .+|+...+.|.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999999999766555544331 2 46777889999996 59999999999
Q ss_pred HHhcCC
Q 016103 388 EISKLP 393 (395)
Q Consensus 388 ~fl~~~ 393 (395)
.|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999764
No 184
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.26 E-value=0.0033 Score=54.10 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=65.9
Q ss_pred CCCCeEEEEcCCCCCh-hhHHH---------------HHHHHHhCCCEEEEEcCCC---CCCC-CCCCCCccChhhhHHH
Q 016103 139 LETNHFVLVHGGGFGA-WCWYK---------------TIALLEEGGFKVTAIDLTG---AGIH-SFDTNGITSLSQYVKP 198 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~-~~~~~---------------~~~~L~~~G~~v~~~d~~G---~G~s-~~~~~~~~~~~~~~~~ 198 (395)
.....+|+|||.|--. ..|.. .++.-.+.||.|++.+--- +-.+ ..+.....+..+.+.-
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3456899999987544 35632 3444556699999987531 1111 1111112233333332
Q ss_pred H-HHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--CcceEEEEcccc
Q 016103 199 L-TDFLEKLPDAEKVILVGHDFGGACISYAMELFPF--KISKAVFIAAAM 245 (395)
Q Consensus 199 l-~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~lVli~~~~ 245 (395)
+ ..++.-... +.|.+|.||+||...+.+..++|+ +|.++.+-++++
T Consensus 179 vw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 2 233333445 499999999999999999999985 677777777664
No 185
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.16 E-value=0.0043 Score=59.11 Aligned_cols=158 Identities=15% Similarity=0.109 Sum_probs=92.2
Q ss_pred HHHHHHHHHC---CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHH
Q 016103 197 KPLTDFLEKL---PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFL 273 (395)
Q Consensus 197 ~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (395)
+.+.+++.+. .++ ++++.|.|==|.++...|+ ...||.+++-+.-........+...+....
T Consensus 157 D~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~yG------------- 221 (367)
T PF10142_consen 157 DAVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSYG------------- 221 (367)
T ss_pred HHHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHhC-------------
Confidence 3445555544 564 9999999999999999888 567899888776554322211111111111
Q ss_pred hhcCCCCCCcchhhhHHHHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHH
Q 016103 274 YANGNNKPPTAIDLDKSLLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQ 353 (395)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~ 353 (395)
...+... ..+...-+................ +-....+++ ++|.++|.|..|.+..++...
T Consensus 222 ----~~ws~a~----~dY~~~gi~~~l~tp~f~~L~~iv---DP~~Y~~rL--------~~PK~ii~atgDeFf~pD~~~ 282 (367)
T PF10142_consen 222 ----GNWSFAF----QDYYNEGITQQLDTPEFDKLMQIV---DPYSYRDRL--------TMPKYIINATGDEFFVPDSSN 282 (367)
T ss_pred ----CCCccch----hhhhHhCchhhcCCHHHHHHHHhc---CHHHHHHhc--------CccEEEEecCCCceeccCchH
Confidence 0000000 011111111111111111111111 112222333 599999999999999999999
Q ss_pred HHHhhCCCC-eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 354 SMINSSPPE-KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 354 ~l~~~l~~~-~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
.+...+|+. .+.++|+++|..-. ..+.+.|..|+.
T Consensus 283 ~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~ 318 (367)
T PF10142_consen 283 FYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYN 318 (367)
T ss_pred HHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHH
Confidence 999999865 67889999998766 556666777764
No 186
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.16 E-value=0.033 Score=53.29 Aligned_cols=36 Identities=17% Similarity=0.282 Sum_probs=31.8
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
+++++|+|.||++|..+|.-.|..+.+++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999998988877666543
No 187
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.10 E-value=0.0049 Score=61.74 Aligned_cols=109 Identities=11% Similarity=0.119 Sum_probs=78.4
Q ss_pred CCCCCeEEEEcCCCCCh-h-hHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCccChhhhHHHHHHHHHHC-C
Q 016103 138 DLETNHFVLVHGGGFGA-W-CWYKTIALLEEGGFKVTAIDLTGAGIHSF-------DTNGITSLSQYVKPLTDFLEKL-P 207 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~-~-~~~~~~~~L~~~G~~v~~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~l-~ 207 (395)
.++.|.+++.-|.-+.. . .|....-.|.++||-.....-||=|.-.. ......++.++++....+++.- +
T Consensus 445 ~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~ 524 (682)
T COG1770 445 DGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT 524 (682)
T ss_pred CCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC
Confidence 45567777776653222 2 35544456788898877777788664422 1233467888888887777653 2
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 208 DAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 208 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
-.+.++++|-|.||+++...+...|+.++++|+--|+..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 225899999999999999999999999999999888753
No 188
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.02 E-value=0.0033 Score=59.45 Aligned_cols=104 Identities=16% Similarity=0.112 Sum_probs=71.0
Q ss_pred CeEEEEcCCCCChhhHHH---HHHHH-HhCCCEEEEEcCCCCCCCCCCCC---------CccChhhhHHHHHHHHHHC--
Q 016103 142 NHFVLVHGGGFGAWCWYK---TIALL-EEGGFKVTAIDLTGAGIHSFDTN---------GITSLSQYVKPLTDFLEKL-- 206 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~---~~~~L-~~~G~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~~l~~~l~~l-- 206 (395)
-+|+|--|.-++-+.|.. ++-.+ .+.+--+|.++||-+|+|..-.. +..+.++..+|...+|.++
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 567888888766665532 22223 23356799999999999954221 1234444455555555554
Q ss_pred --CC-CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 207 --PD-AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 207 --~~-~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+. ..+|+.+|-|+||++|..+=.+||..|.|...-+++.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 22 1489999999999999999999999888877766654
No 189
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.01 E-value=0.0055 Score=59.43 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=83.4
Q ss_pred CCCCCCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCCCCCCCCCC------CccChhhhHHHHHHHHHH
Q 016103 137 PDLETNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGAGIHSFDTN------GITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~l~~~l~~ 205 (395)
...++|..++|-|=|.-...| ..+...-.+.|-.|+.++||-+|.|..... ...+..+...||..+|+.
T Consensus 82 ~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 82 AKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred ccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 366788888888866555445 223344455688999999999998854222 224667777888888888
Q ss_pred CCC----C--CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 206 LPD----A--EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 206 l~~----~--~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++. . .+++.+|-|+-|.++..+=..||+.|.+.|..+++..
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 632 2 2899999999999999999999999999998888754
No 190
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.01 E-value=0.0011 Score=67.16 Aligned_cols=106 Identities=20% Similarity=0.168 Sum_probs=61.3
Q ss_pred CCCeEEEEcCCCCChh----hHHHHHHHHHhCCCEEEEEcCC----CCCCCCCCC-C-CccChhhhHH---HHHHHHHHC
Q 016103 140 ETNHFVLVHGGGFGAW----CWYKTIALLEEGGFKVTAIDLT----GAGIHSFDT-N-GITSLSQYVK---PLTDFLEKL 206 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~----~~~~~~~~L~~~G~~v~~~d~~----G~G~s~~~~-~-~~~~~~~~~~---~l~~~l~~l 206 (395)
.-|++|+|||.+.... ....-...++++++-||.+++| |+-.+.... . ..+.+.|+.. .|.+-|...
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 4599999999743321 2333344556678999999998 332221111 1 3344555554 444444445
Q ss_pred CCC-CcEEEEEeChhHHHHHHHHHH--CCCCcceEEEEcccc
Q 016103 207 PDA-EKVILVGHDFGGACISYAMEL--FPFKISKAVFIAAAM 245 (395)
Q Consensus 207 ~~~-~~v~lvGhS~Gg~~a~~~a~~--~p~~V~~lVli~~~~ 245 (395)
|-+ ++|.|+|||.||..+..++.. ....++++|+.++..
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred ccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 432 599999999999988776664 234799999999854
No 191
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.98 E-value=0.0015 Score=64.86 Aligned_cols=91 Identities=20% Similarity=0.222 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC-CCccChhhhHHHHHHHHHHC---CCCCcEEEEEeChhHHHHHHHHHH
Q 016103 155 WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT-NGITSLSQYVKPLTDFLEKL---PDAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 155 ~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
..|..+++.|++.||. -.|+.|....-+.. ......+++-..+..+++.. +-+++|+||||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3679999999999986 34444333222111 11112355555666666643 323599999999999999998764
Q ss_pred CC---------------CCcceEEEEcccccC
Q 016103 231 FP---------------FKISKAVFIAAAMLT 247 (395)
Q Consensus 231 ~p---------------~~V~~lVli~~~~~~ 247 (395)
.. ..|++.|.++++...
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCC
Confidence 21 148899999987543
No 192
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.80 E-value=0.0034 Score=52.40 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHC----CCCCcEEEEEeChhHHHHHHHHHHCCC----CcceEEEEccccc
Q 016103 195 YVKPLTDFLEKL----PDAEKVILVGHDFGGACISYAMELFPF----KISKAVFIAAAML 246 (395)
Q Consensus 195 ~~~~l~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~----~V~~lVli~~~~~ 246 (395)
....+...++.. .. .+++++|||+||.+|..++..+.. .+..++.++++..
T Consensus 10 ~~~~i~~~~~~~~~~~p~-~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 10 LANLVLPLLKSALAQYPD-YKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHCCC-CeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 334444444433 44 599999999999999999887654 5677888877653
No 193
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.76 E-value=0.039 Score=52.05 Aligned_cols=238 Identities=17% Similarity=0.133 Sum_probs=121.3
Q ss_pred CCeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC-CcEEEEEeC
Q 016103 141 TNHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA-EKVILVGHD 218 (395)
Q Consensus 141 ~~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~lvGhS 218 (395)
..+||++=||.+.. ......+....+.||.++.+-.|-+-..........+.......+..++...+.+ .++++--+|
T Consensus 38 ~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS 117 (350)
T KOG2521|consen 38 EKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFS 117 (350)
T ss_pred cccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEec
Confidence 33555555665444 4446677777888999999998876544333334455666667777777777632 377777999
Q ss_pred hhHHHHHHHH---H-HC-C---CCcceEEEEcccccCCCcchhHHhhhcCCchHHHHHHHHHHhhcCCCCCCcchhhhHH
Q 016103 219 FGGACISYAM---E-LF-P---FKISKAVFIAAAMLTNGQNLLDMFSQQTGSTDLMRQAQIFLYANGNNKPPTAIDLDKS 290 (395)
Q Consensus 219 ~Gg~~a~~~a---~-~~-p---~~V~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (395)
+||...+... . ++ | +.+.++++.+.+........................+....+..... ..........
T Consensus 118 ~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~ 196 (350)
T KOG2521|consen 118 GNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLL-TMAGNEGGAY 196 (350)
T ss_pred CCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEE-Eeeecccchh
Confidence 9998665543 1 12 3 24566777776654322111111111110011100000000000000 0000000000
Q ss_pred HHHHHhcCCCchHHHHHHhhhcccCCChhhHhhhhccccccCCccEEEEEcCCCCccCHHHHHHHHhhC----CCCeEEE
Q 016103 291 LLKELLFNQSPAKDIALASVSMRHIPFAPVLEKLSLSDMKYGSVRRFYIETPEDNAIPIALQQSMINSS----PPEKVFR 366 (395)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PvliI~G~~D~~vp~~~~~~l~~~l----~~~~~~~ 366 (395)
.+...+.... ..+...+.+.+..- ....-.+.+++++..|.++|.+..+.+.+.. -+++.+-
T Consensus 197 ~~~~~~~~~~----------~~r~~~~~~r~~~~----~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~ 262 (350)
T KOG2521|consen 197 LLGPLAEKIS----------MSRKYHFLDRYEEQ----RNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVK 262 (350)
T ss_pred hhhhhhhccc----------cccchHHHHHHHhh----hhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEee
Confidence 0000000000 00000111111000 0011367899999999999998887774432 3456666
Q ss_pred ecCCCCCCccc-ChHHHHHHHHHHhcCC
Q 016103 367 LKGADHSPFFS-KPQALHKLLVEISKLP 393 (395)
Q Consensus 367 i~~~GH~~~~e-~p~~v~~~I~~fl~~~ 393 (395)
+.++-|..++. .|..+.+...+|++..
T Consensus 263 ~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 263 FKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred ccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 77889987765 6889999999998753
No 194
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.72 E-value=0.016 Score=51.67 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=59.2
Q ss_pred CCCeEEEEcCC--CCChh-hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHH--------HHHHHCCC
Q 016103 140 ETNHFVLVHGG--GFGAW-CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLT--------DFLEKLPD 208 (395)
Q Consensus 140 ~~~~vv~~HG~--~~~~~-~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~--------~~l~~l~~ 208 (395)
+.-+|=|+-|. |..+. .|+.+.+.|+++||.|++.-+.- ..+-...|+.+. .+.+..+.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~ 85 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV----------TFDHQAIAREVWERFERCLRALQKRGGL 85 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC----------CCcHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33456666665 33333 68889999999999999987641 122222222221 22222222
Q ss_pred C---CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcc
Q 016103 209 A---EKVILVGHDFGGACISYAMELFPFKISKAVFIAA 243 (395)
Q Consensus 209 ~---~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~ 243 (395)
. -+++-||||+|+-+-+.+...++..-++.|+++-
T Consensus 86 ~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 86 DPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred CcccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 1 2678899999999998888877655567777764
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.68 E-value=0.027 Score=48.09 Aligned_cols=107 Identities=18% Similarity=0.200 Sum_probs=67.7
Q ss_pred CCCeEEEEcCCCCChhhH----H----HHHH----HH--HhCCCEEEEEcCCCCCCCCCCC---CCccChhhhHHHHHHH
Q 016103 140 ETNHFVLVHGGGFGAWCW----Y----KTIA----LL--EEGGFKVTAIDLTGAGIHSFDT---NGITSLSQYVKPLTDF 202 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~----~----~~~~----~L--~~~G~~v~~~d~~G~G~s~~~~---~~~~~~~~~~~~l~~~ 202 (395)
-..+.++++|.+.+.... . .+.+ .+ ...+=.|-++.|.||..-.... .....-++-+.+|..+
T Consensus 18 A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f 97 (177)
T PF06259_consen 18 ADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARF 97 (177)
T ss_pred cCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHH
Confidence 456889999987766421 1 1111 11 1123356677776664331110 1112234555677777
Q ss_pred HHHCC----CCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 203 LEKLP----DAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 203 l~~l~----~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++.|. .+..+.++|||+|+.++-.++...+..+..+|+++++..
T Consensus 98 ~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 98 LDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 77663 234899999999999999988876778999999998753
No 196
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.61 E-value=0.0065 Score=57.35 Aligned_cols=85 Identities=19% Similarity=0.201 Sum_probs=64.6
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCCcEEEEEe
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAEKVILVGH 217 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lvGh 217 (395)
-.-||+.|=|+-+..=..+.++|.++|+.|+-+|-.-|-.+ ..+.++.++|+..+++.. +.. ++.|+|+
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~------~rtPe~~a~Dl~r~i~~y~~~w~~~-~~~liGy 333 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS------ERTPEQIAADLSRLIRFYARRWGAK-RVLLIGY 333 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc------cCCHHHHHHHHHHHHHHHHHhhCcc-eEEEEee
Confidence 45677777666666667789999999999999995433323 247788888888888765 554 9999999
Q ss_pred ChhHHHHHHHHHHCCC
Q 016103 218 DFGGACISYAMELFPF 233 (395)
Q Consensus 218 S~Gg~~a~~~a~~~p~ 233 (395)
|+|+=+.-..-.+.|.
T Consensus 334 SfGADvlP~~~n~L~~ 349 (456)
T COG3946 334 SFGADVLPFAYNRLPP 349 (456)
T ss_pred cccchhhHHHHHhCCH
Confidence 9999987776666654
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.44 E-value=0.0063 Score=49.78 Aligned_cols=37 Identities=35% Similarity=0.626 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH
Q 016103 193 SQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+...+.|..+++.... .++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPD-YSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHh
Confidence 3455667776666665 499999999999999888875
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.22 E-value=0.012 Score=52.43 Aligned_cols=52 Identities=25% Similarity=0.317 Sum_probs=39.0
Q ss_pred hhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC----CCCcceEEEEccccc
Q 016103 193 SQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF----PFKISKAVFIAAAML 246 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~----p~~V~~lVli~~~~~ 246 (395)
...++-+..+++..+ .++++.|||.||.+|.+++... .++|.+++..+++..
T Consensus 69 ~~A~~yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 69 KSALAYLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 334445555555554 3799999999999999999874 357899999988754
No 199
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.16 E-value=0.014 Score=47.94 Aligned_cols=81 Identities=17% Similarity=0.123 Sum_probs=56.7
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS 218 (395)
+...||+.-|||..+..+..++ |.+. + -++++|+..... ..++.. . +.+-||++|
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi--lpeN-~dl~lcYDY~dl~l-------dfDfsA-------------y-~hirlvAwS 65 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI--LPEN-HDLLLCYDYQDLNL-------DFDFSA-------------Y-RHIRLVAWS 65 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc--CCCC-CcEEEEeehhhcCc-------ccchhh-------------h-hhhhhhhhh
Confidence 3348999999999988876653 3443 4 477888864321 122222 2 378899999
Q ss_pred hhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 219 FGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 219 ~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
||-.+|-.+....+ ++..+.+++...
T Consensus 66 MGVwvAeR~lqg~~--lksatAiNGTgL 91 (214)
T COG2830 66 MGVWVAERVLQGIR--LKSATAINGTGL 91 (214)
T ss_pred HHHHHHHHHHhhcc--ccceeeecCCCC
Confidence 99999999988765 788888888654
No 200
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.12 E-value=0.027 Score=56.32 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=73.9
Q ss_pred CCCCeEEEEcCCCC-Chh-hHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCccChhhhHHHHHHHHHHCC-C
Q 016103 139 LETNHFVLVHGGGF-GAW-CWYKTIALLEEGGFKVTAIDLTGAGIHSF-------DTNGITSLSQYVKPLTDFLEKLP-D 208 (395)
Q Consensus 139 ~~~~~vv~~HG~~~-~~~-~~~~~~~~L~~~G~~v~~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~l~-~ 208 (395)
++.|.+|+.+|.-+ +-. .|..--..|..+|+.....|.||=|.-.. -.....++++++.-...+++.-- .
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~ 547 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQ 547 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCC
Confidence 35676666666422 211 35444445666899999999999765422 11234567777777777666431 1
Q ss_pred CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 209 AEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 209 ~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
.++..+.|.|.||.++..++..+|+.+..+|+--|++
T Consensus 548 ~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 548 PSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred ccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 2589999999999999999999999998888876654
No 201
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.04 E-value=0.011 Score=53.26 Aligned_cols=51 Identities=22% Similarity=0.473 Sum_probs=40.0
Q ss_pred HHHHHHHH-CCCC-CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcccccCC
Q 016103 198 PLTDFLEK-LPDA-EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAMLTN 248 (395)
Q Consensus 198 ~l~~~l~~-l~~~-~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~~~ 248 (395)
.|.-+++. ..++ ++-.++|||+||.+++.....+|+.+...++++|.....
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~ 175 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWH 175 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhC
Confidence 44444444 2222 479999999999999999999999999999999976543
No 202
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.90 E-value=0.013 Score=56.55 Aligned_cols=84 Identities=25% Similarity=0.401 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHhCCCE------EEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHC----CCCCcEEEEEeChhHHHH
Q 016103 155 WCWYKTIALLEEGGFK------VTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKL----PDAEKVILVGHDFGGACI 224 (395)
Q Consensus 155 ~~~~~~~~~L~~~G~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~v~lvGhS~Gg~~a 224 (395)
+.|..+++.|..-||. -..+|+|=.- .. ....+++...+...++.. |- ++|+||+|||||.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~---~~---~e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSY---HN---SEERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhcc---CC---hhHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHH
Confidence 6899999999998887 5567777211 11 123455555555555543 44 499999999999999
Q ss_pred HHHHHHCCC--------CcceEEEEcccc
Q 016103 225 SYAMELFPF--------KISKAVFIAAAM 245 (395)
Q Consensus 225 ~~~a~~~p~--------~V~~lVli~~~~ 245 (395)
+.+...+++ .|++.|-++++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchh
Confidence 999998877 366777776654
No 203
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.55 E-value=0.052 Score=57.82 Aligned_cols=99 Identities=11% Similarity=0.070 Sum_probs=72.8
Q ss_pred CCCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 137 PDLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
...+.|+++|+|..-+....+..++..|. .|-+|.-........++++.+.....-+.++....++.|+|
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 46678999999998777777777666553 23344332222334688998888888888887767999999
Q ss_pred eChhHHHHHHHHHHCC--CCcceEEEEcccc
Q 016103 217 HDFGGACISYAMELFP--FKISKAVFIAAAM 245 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p--~~V~~lVli~~~~ 245 (395)
+|+|+.++.++|.... +....+|++++.+
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999999887543 3456699998865
No 204
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.51 E-value=0.04 Score=53.83 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=70.7
Q ss_pred CCCCeEEEEcCCCCChhhHHHHHHH-------------------HHhCCCEEEEEcCC-CCCCCCC-CCCCccChhhhHH
Q 016103 139 LETNHFVLVHGGGFGAWCWYKTIAL-------------------LEEGGFKVTAIDLT-GAGIHSF-DTNGITSLSQYVK 197 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~~~~~~~~-------------------L~~~G~~v~~~d~~-G~G~s~~-~~~~~~~~~~~~~ 197 (395)
.+.|.|+++.|.++.+..|..+.+. +.+. -.++.+|+| |.|.|.. ......+.....+
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccch
Confidence 3578999999999999888766431 1111 368999955 8888864 2222334444445
Q ss_pred HHHHHHHHC--------CCCCcEEEEEeChhHHHHHHHHHHCCC---CcceEEEEcccccCCC
Q 016103 198 PLTDFLEKL--------PDAEKVILVGHDFGGACISYAMELFPF---KISKAVFIAAAMLTNG 249 (395)
Q Consensus 198 ~l~~~l~~l--------~~~~~v~lvGhS~Gg~~a~~~a~~~p~---~V~~lVli~~~~~~~~ 249 (395)
|+..+++.. ....+.+|+|-|+||.-+..+|...-+ ..+++|++.+.....+
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 555444432 222489999999999988887765433 3667777776554433
No 205
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=95.49 E-value=0.035 Score=56.59 Aligned_cols=105 Identities=21% Similarity=0.203 Sum_probs=61.3
Q ss_pred CCeEEEEcCCCCChhh---H--HHHHHHHHhCCCEEEEEcCC----CCCCCC-CCCCCccChhhhHH---HHHHHHHHCC
Q 016103 141 TNHFVLVHGGGFGAWC---W--YKTIALLEEGGFKVTAIDLT----GAGIHS-FDTNGITSLSQYVK---PLTDFLEKLP 207 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~---~--~~~~~~L~~~G~~v~~~d~~----G~G~s~-~~~~~~~~~~~~~~---~l~~~l~~l~ 207 (395)
-|++|++||.+..... + ......+..+..-|+.+.+| |+.... ....+.+.+.|++. .|..-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6999999998543322 2 22333444445778888887 332221 11123345555554 4445555554
Q ss_pred C-CCcEEEEEeChhHHHHHHHHHH--CCCCcceEEEEcccc
Q 016103 208 D-AEKVILVGHDFGGACISYAMEL--FPFKISKAVFIAAAM 245 (395)
Q Consensus 208 ~-~~~v~lvGhS~Gg~~a~~~a~~--~p~~V~~lVli~~~~ 245 (395)
- .++|.|+|||.||..+..+... ....+.++|.+++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 2 2699999999999988776642 113456666666643
No 206
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.35 E-value=0.032 Score=52.99 Aligned_cols=91 Identities=22% Similarity=0.299 Sum_probs=56.6
Q ss_pred CCCCCCeEEEEcCCCC-ChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-CccC-hhhhHHHHHHHHHHCCCCCcEE
Q 016103 137 PDLETNHFVLVHGGGF-GAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-GITS-LSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~-~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-~~~~-~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
....+-.||++||+.+ +...|...+...... +.=..+..+|+-.....+. +... -...++++.+.+....++ ++-
T Consensus 76 ~~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~-kIS 153 (405)
T KOG4372|consen 76 PTKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE-KIS 153 (405)
T ss_pred ccCCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc-eee
Confidence 3555678999999976 667788777776664 3222444444433322111 1111 133455566666666675 999
Q ss_pred EEEeChhHHHHHHHHH
Q 016103 214 LVGHDFGGACISYAME 229 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~ 229 (395)
.||||+||.++..+..
T Consensus 154 fvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 154 FVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeecCCeeeeEEEE
Confidence 9999999998876544
No 207
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.33 E-value=0.034 Score=50.90 Aligned_cols=109 Identities=16% Similarity=0.109 Sum_probs=62.7
Q ss_pred CCCCCeEEEEcCCC--CChhhHHHHHHHHHhC---CCEEEEEcCCCCCCC-CCCCCCccChhhhHHHHHHHHHHC----C
Q 016103 138 DLETNHFVLVHGGG--FGAWCWYKTIALLEEG---GFKVTAIDLTGAGIH-SFDTNGITSLSQYVKPLTDFLEKL----P 207 (395)
Q Consensus 138 ~~~~~~vv~~HG~~--~~~~~~~~~~~~L~~~---G~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~l~~~l~~l----~ 207 (395)
..+-|++++.||-- .+...++.+...+++. .-.++.+|.----.- ..-.........++++|.=+++.. .
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~ 174 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSA 174 (299)
T ss_pred cccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCcccc
Confidence 44568999999842 2222344343333331 245666665310000 000011112333444444444442 1
Q ss_pred CCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 208 DAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 208 ~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
....-+|+|.|+||.+++..+.++|+.+..++..++...
T Consensus 175 ~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 175 DADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred cCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 123679999999999999999999999999998888654
No 208
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.28 E-value=0.037 Score=49.54 Aligned_cols=21 Identities=38% Similarity=0.498 Sum_probs=18.7
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 016103 210 EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
.++++.|||+||.+|..++..
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 489999999999999888775
No 209
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.28 E-value=0.039 Score=48.13 Aligned_cols=68 Identities=18% Similarity=0.127 Sum_probs=45.1
Q ss_pred HHHhCCCEEEEEcCCCCCCCCCC-C-------CCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 163 LLEEGGFKVTAIDLTGAGIHSFD-T-------NGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 163 ~L~~~G~~v~~~d~~G~G~s~~~-~-------~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
.+... .+|++|=+|=....... . .......|..+....+|++.+-+++++|+|||.|+.+.+++...+
T Consensus 41 ~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 41 AFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44444 57788777632221111 0 011234556667777888887778999999999999999998864
No 210
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.16 E-value=0.041 Score=47.23 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=43.7
Q ss_pred CEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHH----HHCCCCCcEEEEEeChhHHHHHHHHHH--C----CCCcceE
Q 016103 169 FKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFL----EKLPDAEKVILVGHDFGGACISYAMEL--F----PFKISKA 238 (395)
Q Consensus 169 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l----~~l~~~~~v~lvGhS~Gg~~a~~~a~~--~----p~~V~~l 238 (395)
..+..+++|-..... ....+..+-++.+...+ ..-. +.+++|+|+|.|+.++..++.. . .++|.++
T Consensus 40 ~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP-~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCP-NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHST-TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCC-CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 556667777432211 11123333344444444 4433 3599999999999999998877 2 3478999
Q ss_pred EEEcccccCC
Q 016103 239 VFIAAAMLTN 248 (395)
Q Consensus 239 Vli~~~~~~~ 248 (395)
|+++-+....
T Consensus 116 vlfGdP~~~~ 125 (179)
T PF01083_consen 116 VLFGDPRRGA 125 (179)
T ss_dssp EEES-TTTBT
T ss_pred EEecCCcccC
Confidence 9998876543
No 211
>PLN02162 triacylglycerol lipase
Probab=94.77 E-value=0.078 Score=51.65 Aligned_cols=50 Identities=24% Similarity=0.240 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH---C-----CCCcceEEEEcccc
Q 016103 195 YVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMEL---F-----PFKISKAVFIAAAM 245 (395)
Q Consensus 195 ~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~V~~lVli~~~~ 245 (395)
..+.+..++..... .++++.|||+||++|..+|.. + .+++.+++..+.+-
T Consensus 264 I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPR 321 (475)
T PLN02162 264 IRQMLRDKLARNKN-LKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPR 321 (475)
T ss_pred HHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCC
Confidence 34455566665544 489999999999999887652 1 12345666666553
No 212
>PLN00413 triacylglycerol lipase
Probab=94.73 E-value=0.082 Score=51.66 Aligned_cols=51 Identities=20% Similarity=0.343 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH---C-----CCCcceEEEEcccc
Q 016103 194 QYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMEL---F-----PFKISKAVFIAAAM 245 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~---~-----p~~V~~lVli~~~~ 245 (395)
+..+.|..+++.... .++++.|||+||++|..+|.. + ..++.+++..+++-
T Consensus 269 ~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 269 TILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 345667777777655 489999999999999988752 1 22455666766643
No 213
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=94.32 E-value=0.18 Score=50.29 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=65.9
Q ss_pred CCCeEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCC-------CCCCccChhhhHHHHHHHHHHCCC--
Q 016103 140 ETNHFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSF-------DTNGITSLSQYVKPLTDFLEKLPD-- 208 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~-------~~~~~~~~~~~~~~l~~~l~~l~~-- 208 (395)
+.|++|+--|...-+. .|........++|...+..+.||=|+-.. ..+.....+++++-...+++. ++
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gits 498 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITS 498 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCC
Confidence 4666665554322221 35555577778899999999999775421 111223344554444444433 33
Q ss_pred CCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEcc
Q 016103 209 AEKVILVGHDFGGACISYAMELFPFKISKAVFIAA 243 (395)
Q Consensus 209 ~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~ 243 (395)
.+++.+.|-|=||.+.-.+..++|+.+.++|.--|
T Consensus 499 pe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 499 PEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred HHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 25899999999999999999999997766665444
No 214
>PLN02310 triacylglycerol lipase
Probab=94.19 E-value=0.12 Score=49.73 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHCC---CCCcEEEEEeChhHHHHHHHHHH----CCCCcceEEEEccc
Q 016103 193 SQYVKPLTDFLEKLP---DAEKVILVGHDFGGACISYAMEL----FPFKISKAVFIAAA 244 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~----~p~~V~~lVli~~~ 244 (395)
++..+.|..+++.+. .+-++.+.|||+||.+|+.+|.. .+...-.++.++++
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsP 247 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAP 247 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCC
Confidence 344556777776552 22379999999999999888753 23322235555544
No 215
>PLN02454 triacylglycerol lipase
Probab=93.72 E-value=0.12 Score=49.96 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=24.6
Q ss_pred HHHHHHHHHHCCCC-CcEEEEEeChhHHHHHHHHHH
Q 016103 196 VKPLTDFLEKLPDA-EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 196 ~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
...|..+++..... -+|++.|||+||.+|+.+|..
T Consensus 213 l~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 213 LAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 34555555554332 149999999999999998854
No 216
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.71 E-value=0.15 Score=48.24 Aligned_cols=39 Identities=26% Similarity=0.502 Sum_probs=31.6
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCCC-----cceEEEEcccccCC
Q 016103 210 EKVILVGHDFGGACISYAMELFPFK-----ISKAVFIAAAMLTN 248 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~~-----V~~lVli~~~~~~~ 248 (395)
++|.|||||+|+.+...+.....++ |..+++++++...+
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 4899999999999988877654443 89999999876544
No 217
>PLN02571 triacylglycerol lipase
Probab=93.59 E-value=0.12 Score=50.01 Aligned_cols=38 Identities=21% Similarity=0.343 Sum_probs=28.8
Q ss_pred hhhHHHHHHHHHHCCCC-CcEEEEEeChhHHHHHHHHHH
Q 016103 193 SQYVKPLTDFLEKLPDA-EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+++.++|..+++..... -++++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45566777777766432 268999999999999988764
No 218
>PLN02408 phospholipase A1
Probab=92.78 E-value=0.18 Score=48.07 Aligned_cols=36 Identities=17% Similarity=0.278 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHCCCC-CcEEEEEeChhHHHHHHHHHH
Q 016103 195 YVKPLTDFLEKLPDA-EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 195 ~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
..+.|..+++..... .++++.|||+||.+|..+|..
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 345677777766532 259999999999999988765
No 219
>PLN02324 triacylglycerol lipase
Probab=92.18 E-value=0.23 Score=47.96 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHCCCC-CcEEEEEeChhHHHHHHHHHH
Q 016103 195 YVKPLTDFLEKLPDA-EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 195 ~~~~l~~~l~~l~~~-~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+.+.|..+++...-. -.|++.|||+||.+|..+|..
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 345677777765431 369999999999999988754
No 220
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.05 E-value=0.26 Score=42.28 Aligned_cols=61 Identities=11% Similarity=0.181 Sum_probs=47.0
Q ss_pred CccEEEEEcCCCCccCHHHHHH---HHhhCCCC--eEEEecCCCCCCcccCh---HHHHHHHHHHhcCC
Q 016103 333 SVRRFYIETPEDNAIPIALQQS---MINSSPPE--KVFRLKGADHSPFFSKP---QALHKLLVEISKLP 393 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~---l~~~l~~~--~~~~i~~~GH~~~~e~p---~~v~~~I~~fl~~~ 393 (395)
+++.|-|-|+.|.++.+..... +...+|.. ..++.+|+||+..+.-+ +++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 6788899999999998776544 44445532 56788899999888765 67889999998753
No 221
>PLN02934 triacylglycerol lipase
Probab=91.83 E-value=0.26 Score=48.64 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAME 229 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 229 (395)
+....|..+++.... .++++.|||+||++|..+|.
T Consensus 306 ~v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 306 AVRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 345566777776655 49999999999999998874
No 222
>PLN03037 lipase class 3 family protein; Provisional
Probab=91.79 E-value=0.24 Score=49.03 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHCC---CCCcEEEEEeChhHHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLP---DAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 194 ~~~~~l~~~l~~l~---~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+..++|..+++.+. .+-++.|.|||+||.+|+.+|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 44567777777653 22379999999999999888753
No 223
>PLN02753 triacylglycerol lipase
Probab=91.69 E-value=0.27 Score=48.72 Aligned_cols=37 Identities=22% Similarity=0.329 Sum_probs=27.3
Q ss_pred hhHHHHHHHHHHCCC----CCcEEEEEeChhHHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLPD----AEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+..+.|..+++.... +-+|++.|||+||.+|+.+|..
T Consensus 292 QVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 292 QILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 344566777766532 2489999999999999988753
No 224
>PLN02802 triacylglycerol lipase
Probab=91.58 E-value=0.28 Score=48.36 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHCCC-CCcEEEEEeChhHHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLPD-AEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~-~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+..+.|..+++...- +..|++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 344567777776532 2368999999999999987764
No 225
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=91.36 E-value=0.54 Score=45.07 Aligned_cols=107 Identities=14% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCCCCCCeEEEEcCCCCChhhHH-HHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CccChhhhHHHHHHHHHHC---CCC
Q 016103 136 LPDLETNHFVLVHGGGFGAWCWY-KTIALLEEGGFKVTAIDLTGAGIHSFDTN--GITSLSQYVKPLTDFLEKL---PDA 209 (395)
Q Consensus 136 ~~~~~~~~vv~~HG~~~~~~~~~-~~~~~L~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~l~~~l~~l---~~~ 209 (395)
..+...|+|+..-|++.+..-.+ .....|. -+-+.+++|-++.|...+. ...++++.+.|.+.+++.+ -.
T Consensus 58 Hk~~drPtV~~T~GY~~~~~p~r~Ept~Lld---~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~- 133 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGYNVSTSPRRSEPTQLLD---GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYP- 133 (448)
T ss_pred EcCCCCCeEEEecCcccccCccccchhHhhc---cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhcc-
Confidence 34677899999999977544332 3334443 3689999999999965443 3468888898888887776 33
Q ss_pred CcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 210 EKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
.+.+--|-|=||++++.+=.-||+-|.+.|..-++..
T Consensus 134 ~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 134 GKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred CCceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 4889999999999999998889999999888777653
No 226
>PLN02761 lipase class 3 family protein
Probab=91.06 E-value=0.32 Score=48.16 Aligned_cols=36 Identities=14% Similarity=0.237 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHCC-----CCCcEEEEEeChhHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLP-----DAEKVILVGHDFGGACISYAME 229 (395)
Q Consensus 194 ~~~~~l~~~l~~l~-----~~~~v~lvGhS~Gg~~a~~~a~ 229 (395)
++.+.|..+++..+ .+-++++.|||+||.+|..+|.
T Consensus 273 qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 273 QVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 44556777776652 2237999999999999998875
No 227
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.71 E-value=13 Score=36.81 Aligned_cols=90 Identities=16% Similarity=0.012 Sum_probs=58.1
Q ss_pred CCCCCeEEEEcCCCCChhhHH--HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC-CcEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWY--KTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA-EKVIL 214 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~--~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~v~l 214 (395)
+-..|..|+.-|+-. ++.|. .+.+.|.. =-.+.=|.|=-|.+=......+ -+...+-|.+.|+.||.+ ..++|
T Consensus 286 D~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~--PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF~~~qLIL 361 (511)
T TIGR03712 286 DFKPPLNVYFSGYRP-AEGFEGYFMMKRLGA--PFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGFDHDQLIL 361 (511)
T ss_pred CCCCCeEEeeccCcc-cCcchhHHHHHhcCC--CeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhCCCHHHeee
Confidence 345678899999843 44443 34444433 1344456665554421111112 345567788889999886 57999
Q ss_pred EEeChhHHHHHHHHHHC
Q 016103 215 VGHDFGGACISYAMELF 231 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~ 231 (395)
-|-|||.+-|+++++..
T Consensus 362 SGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 362 SGLSMGTFGALYYGAKL 378 (511)
T ss_pred ccccccchhhhhhcccC
Confidence 99999999999999864
No 228
>PLN02719 triacylglycerol lipase
Probab=90.32 E-value=0.43 Score=47.20 Aligned_cols=37 Identities=22% Similarity=0.366 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHCCC----CCcEEEEEeChhHHHHHHHHHH
Q 016103 194 QYVKPLTDFLEKLPD----AEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~----~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+..+.|..+++.... .-+|.+.|||+||.+|..+|..
T Consensus 278 QVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 278 QVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344566667766532 2379999999999999988753
No 229
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.71 E-value=0.98 Score=37.90 Aligned_cols=44 Identities=14% Similarity=0.175 Sum_probs=36.1
Q ss_pred HHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEccccc
Q 016103 202 FLEKLPDAEKVILVGHDFGGACISYAMELFPFKISKAVFIAAAML 246 (395)
Q Consensus 202 ~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~~~ 246 (395)
++++.-+ ...++-|.||||+.|+.+.-++|+...++|.+++...
T Consensus 94 v~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 94 VIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3444333 3778889999999999999999999999999998753
No 230
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.07 E-value=2.7 Score=37.44 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=49.5
Q ss_pred CCEEEEEcCCCC-CC-C-CCCCCCccChhhhHHHHHHHHHHC-CCCCcEEEEEeChhHHHHHHHHHHC---C--C-Ccce
Q 016103 168 GFKVTAIDLTGA-GI-H-SFDTNGITSLSQYVKPLTDFLEKL-PDAEKVILVGHDFGGACISYAMELF---P--F-KISK 237 (395)
Q Consensus 168 G~~v~~~d~~G~-G~-s-~~~~~~~~~~~~~~~~l~~~l~~l-~~~~~v~lvGhS~Gg~~a~~~a~~~---p--~-~V~~ 237 (395)
|+.+..+++|.. +- + -.......++.+=++.+.+.+... ..+++++++|+|+|+.++...+.+. + . ....
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 677888888862 11 0 001112345666667777777652 2346999999999999998877653 1 1 2345
Q ss_pred EEEEcccccC
Q 016103 238 AVFIAAAMLT 247 (395)
Q Consensus 238 lVli~~~~~~ 247 (395)
.|+++-+...
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 6777665433
No 231
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=88.37 E-value=1.9 Score=43.06 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=54.9
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCC--CCCCccChhh-----------hHHHHHHHHHHC---CCCCcEEEEEeChhHHH
Q 016103 160 TIALLEEGGFKVTAIDLTGAGIHSF--DTNGITSLSQ-----------YVKPLTDFLEKL---PDAEKVILVGHDFGGAC 223 (395)
Q Consensus 160 ~~~~L~~~G~~v~~~d~~G~G~s~~--~~~~~~~~~~-----------~~~~l~~~l~~l---~~~~~v~lvGhS~Gg~~ 223 (395)
+...|. +||.++.=|- ||..+.. ......+.+. .+..-.++++.+ .. +.-+..|.|-||.-
T Consensus 52 ~~~~~~-~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p-~~sY~~GcS~GGRq 128 (474)
T PF07519_consen 52 MATALA-RGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAP-KYSYFSGCSTGGRQ 128 (474)
T ss_pred cchhhh-cCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCCCcch
Confidence 334444 4999999995 6655532 1111122222 222223333333 33 48899999999999
Q ss_pred HHHHHHHCCCCcceEEEEcccc
Q 016103 224 ISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 224 a~~~a~~~p~~V~~lVli~~~~ 245 (395)
++..|.+||+...++|.-+|..
T Consensus 129 gl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 129 GLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHhChhhcCeEEeCCchH
Confidence 9999999999999999998875
No 232
>PLN02847 triacylglycerol lipase
Probab=88.30 E-value=0.81 Score=46.08 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 016103 210 EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999887764
No 233
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=87.71 E-value=0.41 Score=33.23 Aligned_cols=20 Identities=20% Similarity=0.207 Sum_probs=12.2
Q ss_pred CCCCCeEEEEcCCCCChhhH
Q 016103 138 DLETNHFVLVHGGGFGAWCW 157 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~ 157 (395)
...+|+|++.||+.+++..|
T Consensus 40 ~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 40 NKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TTT--EEEEE--TT--GGGG
T ss_pred CCCCCcEEEECCcccChHHH
Confidence 55688999999999999988
No 234
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.44 E-value=1.2 Score=44.65 Aligned_cols=56 Identities=18% Similarity=0.246 Sum_probs=36.9
Q ss_pred ChhhhHHHHHHHHHHCCC--CCcEEEEEeChhHHHHHHHHHH-----CCC------CcceEEEEccccc
Q 016103 191 SLSQYVKPLTDFLEKLPD--AEKVILVGHDFGGACISYAMEL-----FPF------KISKAVFIAAAML 246 (395)
Q Consensus 191 ~~~~~~~~l~~~l~~l~~--~~~v~lvGhS~Gg~~a~~~a~~-----~p~------~V~~lVli~~~~~ 246 (395)
++..-...+...|...++ +++|+.|||||||.++=.+... .|+ ...++|+++.+..
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 344444555555555444 3699999999999988665543 233 3678888887743
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=86.54 E-value=1.1 Score=42.67 Aligned_cols=37 Identities=30% Similarity=0.389 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH
Q 016103 193 SQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 193 ~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
..+.+++..+++...- -++.+-|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 5666777777877764 599999999999999888764
No 236
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=84.87 E-value=2.1 Score=40.42 Aligned_cols=56 Identities=11% Similarity=0.156 Sum_probs=43.5
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhCCCC-eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSSPPE-KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l~~~-~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
.+|-.++.+..|.+.+++......+.+|+. -+.++|+..|... +..+.+.|..|+.
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 589999999999999999999999999987 4778899999753 3334444554543
No 237
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=84.76 E-value=13 Score=28.40 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=56.4
Q ss_pred Chhh-HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH--HHHHHHH
Q 016103 153 GAWC-WYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA--CISYAME 229 (395)
Q Consensus 153 ~~~~-~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~--~a~~~a~ 229 (395)
+++. |..+.+.|..+||..=.+.++..|.+....-.....+.=...|..+++.+... +++|||-|--.= +-..+|.
T Consensus 8 SPwnly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 8 SPWNLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred CHHHHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHH
Confidence 4444 45566666777887777777777655322111111134455788888888764 999999885543 4455788
Q ss_pred HCCCCcceEEE
Q 016103 230 LFPFKISKAVF 240 (395)
Q Consensus 230 ~~p~~V~~lVl 240 (395)
++|++|.++.+
T Consensus 87 ~~P~~i~ai~I 97 (100)
T PF09949_consen 87 RFPGRILAIYI 97 (100)
T ss_pred HCCCCEEEEEE
Confidence 89999988754
No 238
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=81.78 E-value=2.4 Score=38.55 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=26.1
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
||...+..+-.+.++.|-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 44444444444569999999999999999988764
No 239
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=81.78 E-value=2.4 Score=38.55 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=26.1
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
||...+..+-.+.++.|-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 44444444444569999999999999999988764
No 240
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=80.47 E-value=14 Score=37.26 Aligned_cols=98 Identities=18% Similarity=0.123 Sum_probs=55.0
Q ss_pred CCeEEEEcCCCCChh-------hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHH---HCCCC-
Q 016103 141 TNHFVLVHGGGFGAW-------CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLE---KLPDA- 209 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~-------~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~---~l~~~- 209 (395)
.-.||-+||.|.-+. ..+.|+..| |..|+.+|+-=--+.. ....+++..=....+|+ .+|..
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaP----FPRaleEv~fAYcW~inn~allG~Tg 468 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAP----FPRALEEVFFAYCWAINNCALLGSTG 468 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCC----CCcHHHHHHHHHHHHhcCHHHhCccc
Confidence 336888999876443 234455544 6889999984222111 11223333322233332 34432
Q ss_pred CcEEEEEeChhHHHHHHHHHH----CCCCcceEEEEcccc
Q 016103 210 EKVILVGHDFGGACISYAMEL----FPFKISKAVFIAAAM 245 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~----~p~~V~~lVli~~~~ 245 (395)
++|+++|-|.||.+.+-.|.+ .-..-.+|++.-++.
T Consensus 469 Eriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 469 ERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred ceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 799999999999865444433 222235777766553
No 241
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=80.46 E-value=4.7 Score=37.46 Aligned_cols=104 Identities=14% Similarity=0.120 Sum_probs=69.7
Q ss_pred CCCCeEEEEcCCCCChh----hHHHHHH-----------HHHhCCCEEEEEcCC-CCCCCCCCCC--CccChhhhHHHHH
Q 016103 139 LETNHFVLVHGGGFGAW----CWYKTIA-----------LLEEGGFKVTAIDLT-GAGIHSFDTN--GITSLSQYVKPLT 200 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~----~~~~~~~-----------~L~~~G~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~l~ 200 (395)
...|..+.+.|.++.+. .|+.+-+ .|.. ..++.+|-| |.|.|--... ...+..+.+.|+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 56788999999855443 2333221 2222 468888887 8888743332 2346788888999
Q ss_pred HHHHHC-------CCCCcEEEEEeChhHHHHHHHHHHCCC---------CcceEEEEcccc
Q 016103 201 DFLEKL-------PDAEKVILVGHDFGGACISYAMELFPF---------KISKAVFIAAAM 245 (395)
Q Consensus 201 ~~l~~l-------~~~~~v~lvGhS~Gg~~a~~~a~~~p~---------~V~~lVli~~~~ 245 (395)
.+++.+ .. .+++|+..|+||-+|..++...-+ .+.+++|=++..
T Consensus 107 ~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWI 166 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWI 166 (414)
T ss_pred HHHHHHHhcCccccc-cceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCccc
Confidence 999875 33 489999999999999888765322 345666655543
No 242
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=79.31 E-value=1.6 Score=34.30 Aligned_cols=25 Identities=20% Similarity=0.149 Sum_probs=14.8
Q ss_pred CCCCCCeEEEEcCCCCChhhHHHHH
Q 016103 137 PDLETNHFVLVHGGGFGAWCWYKTI 161 (395)
Q Consensus 137 ~~~~~~~vv~~HG~~~~~~~~~~~~ 161 (395)
...+..||||+|||+++-..|..++
T Consensus 88 ~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCCCeEEEEECCCCccHHhHHhhC
Confidence 3556679999999999988777653
No 243
>PRK12467 peptide synthase; Provisional
Probab=79.29 E-value=11 Score=47.94 Aligned_cols=100 Identities=15% Similarity=0.054 Sum_probs=71.5
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChh
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFG 220 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~G 220 (395)
.+.|++.|........+..+...|.. +..++.+..++.-.... ...++++++....+.+.......+..+.|+|+|
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCC-CCcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 45699999998888888888888866 37888888766533221 224677777777777766544458999999999
Q ss_pred HHHHHHHHHH---CCCCcceEEEEccc
Q 016103 221 GACISYAMEL---FPFKISKAVFIAAA 244 (395)
Q Consensus 221 g~~a~~~a~~---~p~~V~~lVli~~~ 244 (395)
|.++.+++.. .-+.+.-+.+++..
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~~~ 3794 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFDNT 3794 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEecc
Confidence 9999888764 34556666666543
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=77.30 E-value=4.5 Score=39.95 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=36.3
Q ss_pred CCCCCcEEEEEeChhHHHHHHHHHHC-----CCCcceEEEEcccccCCCcchhH
Q 016103 206 LPDAEKVILVGHDFGGACISYAMELF-----PFKISKAVFIAAAMLTNGQNLLD 254 (395)
Q Consensus 206 l~~~~~v~lvGhS~Gg~~a~~~a~~~-----p~~V~~lVli~~~~~~~~~~~~~ 254 (395)
+|. ++|.|||+|+|+.+...+.... -+.|..+++++++.+.....+..
T Consensus 444 qG~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k 496 (633)
T KOG2385|consen 444 QGN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLK 496 (633)
T ss_pred cCC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHH
Confidence 355 5999999999999988766532 23588999999998766555444
No 245
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=76.43 E-value=12 Score=32.73 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=51.8
Q ss_pred HHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh----hHHHHHHHHHHCC-C
Q 016103 160 TIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF----GGACISYAMELFP-F 233 (395)
Q Consensus 160 ~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~----Gg~~a~~~a~~~p-~ 233 (395)
....+..+|. +|+..|.++. ..++.+.+++.+.++++..+. .++|+|||. |..++-.+|.+.- .
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 3444555676 7888887542 336789999999999998873 899999999 7888888888743 2
Q ss_pred CcceEEEE
Q 016103 234 KISKAVFI 241 (395)
Q Consensus 234 ~V~~lVli 241 (395)
.+..++-+
T Consensus 138 lvsdv~~l 145 (202)
T cd01714 138 QITYVSKI 145 (202)
T ss_pred ccceEEEE
Confidence 34444444
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=71.59 E-value=28 Score=32.05 Aligned_cols=90 Identities=10% Similarity=0.087 Sum_probs=50.3
Q ss_pred CeEEEEcCCCCChhh------HHHHHHHH-HhCCCEEEEEcCCCCCCC--------CCC----C--CCccChhhhHHHH-
Q 016103 142 NHFVLVHGGGFGAWC------WYKTIALL-EEGGFKVTAIDLTGAGIH--------SFD----T--NGITSLSQYVKPL- 199 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~------~~~~~~~L-~~~G~~v~~~d~~G~G~s--------~~~----~--~~~~~~~~~~~~l- 199 (395)
..|||+=|.+.+... -..+.+.+ ...+-..+++=.+|-|.. ... . .....+++.+...
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 356777776554431 23444555 222334444555666661 110 0 0113445544443
Q ss_pred HHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 200 TDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 200 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
..+.+....+.++.|+|+|-|+++|-.+|...
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 33446665556899999999999999998753
No 247
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=71.08 E-value=43 Score=32.55 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=64.7
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC----------------------CccChhhhHHHH
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN----------------------GITSLSQYVKPL 199 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~----------------------~~~~~~~~~~~l 199 (395)
|.|+++-=+-.-...+.++.+.+.+.|..|+.+|.--.+....... ....++.+++-+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 3455553344444678889999999999999999754443322110 001223334444
Q ss_pred HHHHHHC----CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEc
Q 016103 200 TDFLEKL----PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIA 242 (395)
Q Consensus 200 ~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~ 242 (395)
..++..+ .++ -|+-+|-|.|..++...+...|=-+-+++..-
T Consensus 82 ~~~v~~l~~~g~i~-Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVST 127 (403)
T PF06792_consen 82 ARFVSDLYDEGKID-GVIGIGGSGGTALATAAMRALPIGFPKLMVST 127 (403)
T ss_pred HHHHHHHHhcCCcc-EEEEecCCccHHHHHHHHHhCCCCCCeEEEEc
Confidence 4555444 344 78889999999999999998887666666543
No 248
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=68.45 E-value=16 Score=29.24 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=37.8
Q ss_pred CCCCCCCeEEEEcCCCCChhhH--HHHHHHHHhCCCE---E----EEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH
Q 016103 136 LPDLETNHFVLVHGGGFGAWCW--YKTIALLEEGGFK---V----TAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 136 ~~~~~~~~vv~~HG~~~~~~~~--~~~~~~L~~~G~~---v----~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 205 (395)
...+++|.|+-+||+.+....| +-+++.|-..|.. | ...|+| ....++++-++|..+|..
T Consensus 47 ~~~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP----------~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 47 NPNPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFP----------HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCC----------CchHHHHHHHHHHHHHHH
Confidence 3467889999999998888876 4467776665532 2 222322 223566666666666643
No 249
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=68.00 E-value=8.7 Score=38.41 Aligned_cols=60 Identities=15% Similarity=0.048 Sum_probs=44.7
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHh----hCCC--------CeEEEecCCCCCCccc--ChHHHHHHHHHHhcC
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMIN----SSPP--------EKVFRLKGADHSPFFS--KPQALHKLLVEISKL 392 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~----~l~~--------~~~~~i~~~GH~~~~e--~p~~v~~~I~~fl~~ 392 (395)
.-.+++.||..|.+||+.....+++ ..+. .+++.+||.+|+.--. .+-.+...|.+|+++
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 4688999999999999876544433 3322 3799999999986543 445688889999875
No 250
>PRK02399 hypothetical protein; Provisional
Probab=67.77 E-value=69 Score=31.14 Aligned_cols=99 Identities=21% Similarity=0.282 Sum_probs=62.9
Q ss_pred CeEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------------------CCccChhhhHHH
Q 016103 142 NHFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT----------------------NGITSLSQYVKP 198 (395)
Q Consensus 142 ~~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~----------------------~~~~~~~~~~~~ 198 (395)
+.|+++ |-.++. ..+.++.+.+.++|..|+.+|.-..|....+. +....++.+++-
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 344444 555554 56888888888889999999984443221111 000112334444
Q ss_pred HHHHHHHC----CCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEEEc
Q 016103 199 LTDFLEKL----PDAEKVILVGHDFGGACISYAMELFPFKISKAVFIA 242 (395)
Q Consensus 199 l~~~l~~l----~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~ 242 (395)
...++..| .++ -++-+|-|.|..++...+...|=-+-+++..-
T Consensus 83 a~~~v~~L~~~g~i~-gviglGGs~GT~lat~aMr~LPiG~PKlmVST 129 (406)
T PRK02399 83 AAAFVRELYERGDVA-GVIGLGGSGGTALATPAMRALPIGVPKLMVST 129 (406)
T ss_pred HHHHHHHHHhcCCcc-EEEEecCcchHHHHHHHHHhCCCCCCeEEEEc
Confidence 45555443 354 78899999999999999998887666666543
No 251
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=65.11 E-value=38 Score=32.45 Aligned_cols=88 Identities=20% Similarity=0.272 Sum_probs=63.9
Q ss_pred CCCeEEEEcCCCCCh-------hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcE
Q 016103 140 ETNHFVLVHGGGFGA-------WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKV 212 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~-------~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v 212 (395)
+...||++||-..++ +.|..+++.+.++| -+-.+|.--.|..+ .+++.+..|..++... +-
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~-------GleeDa~~lR~~a~~~----~~ 237 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFAD-------GLEEDAYALRLFAEVG----PE 237 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhcc-------chHHHHHHHHHHHHhC----Cc
Confidence 345799999976655 47999999999986 45667776555432 3777777888777764 22
Q ss_pred EEEEeChhHHHHHHHHHHCCCCcceEEEEccc
Q 016103 213 ILVGHDFGGACISYAMELFPFKISKAVFIAAA 244 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~~ 244 (395)
.+|..|+.=..++ |.+||-++++++..
T Consensus 238 ~lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 238 LLVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 8888887755444 77899999999653
No 252
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=63.28 E-value=69 Score=24.89 Aligned_cols=75 Identities=19% Similarity=0.233 Sum_probs=52.9
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhC-CCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEG-GFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGG 221 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~-G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg 221 (395)
.||..|| .-+......++.+... -..+.++++. ...+++++.+.+.+.++.++..+.+.++.==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 5889999 5666777777777765 3467777764 2257899999999999998765466666666666
Q ss_pred HHHHHHHH
Q 016103 222 ACISYAME 229 (395)
Q Consensus 222 ~~a~~~a~ 229 (395)
...-.++.
T Consensus 70 sp~n~a~~ 77 (116)
T PF03610_consen 70 SPFNEAAR 77 (116)
T ss_dssp HHHHHHHH
T ss_pred ccchHHHH
Confidence 55444444
No 253
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=62.57 E-value=58 Score=27.91 Aligned_cols=39 Identities=13% Similarity=-0.015 Sum_probs=31.2
Q ss_pred CCCCCeEEEEcCCCCChhh--HHHHHHHHHhCCCEEEEEcC
Q 016103 138 DLETNHFVLVHGGGFGAWC--WYKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~--~~~~~~~L~~~G~~v~~~d~ 176 (395)
....+.+|++-|+.++..+ -..+.+.|.+.|+.+++.|-
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 4567789999999766653 35677889999999999994
No 254
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=62.36 E-value=70 Score=30.07 Aligned_cols=93 Identities=14% Similarity=0.068 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcCCC----CCh-hhHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCC---------------CccChhhhH
Q 016103 138 DLETNHFVLVHGGG----FGA-WCWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTN---------------GITSLSQYV 196 (395)
Q Consensus 138 ~~~~~~vv~~HG~~----~~~-~~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~---------------~~~~~~~~~ 196 (395)
+..+..|+|+-|.. ... ..--.+...|.. .|.+++++=-+|.|.-..... ...++...+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 44566788888852 222 233445555655 578888888888875522110 011222222
Q ss_pred H-HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHH
Q 016103 197 K-PLTDFLEKLPDAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 197 ~-~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
. ....++.+...+.+|+++|+|-|+++|--+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2 334455666666799999999999999888875
No 255
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=61.24 E-value=10 Score=35.03 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=24.8
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHH
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAME 229 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 229 (395)
.+.+++..+|+. +-.++|||+|-+.|+.++.
T Consensus 71 a~~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 71 ALARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 344566778886 8999999999999988764
No 256
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=59.78 E-value=7.2 Score=36.70 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=25.1
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHH
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAME 229 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 229 (395)
.+.++++..|+. +-.++|||+|=+.|+.++.
T Consensus 73 al~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 73 ALARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 455667788886 9999999999998887764
No 257
>COG3933 Transcriptional antiterminator [Transcription]
Probab=58.40 E-value=63 Score=31.69 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
.-.+||+.||.. ++.+...++..|... =-+.++|+| -..++.+..+.+.+.+++.... +=+++=-.|
T Consensus 108 ~v~vIiiAHG~s-TASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~-~GlllLVDM 174 (470)
T COG3933 108 RVKVIIIAHGYS-TASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYR-SGLLLLVDM 174 (470)
T ss_pred ceeEEEEecCcc-hHHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCcc-CceEEEEec
Confidence 345899999975 667778888888776 568999997 2358899999999999998775 556677799
Q ss_pred hHHHHHHHH
Q 016103 220 GGACISYAM 228 (395)
Q Consensus 220 Gg~~a~~~a 228 (395)
|......-.
T Consensus 175 GSL~~f~~~ 183 (470)
T COG3933 175 GSLTSFGSI 183 (470)
T ss_pred chHHHHHHH
Confidence 988766433
No 258
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=57.27 E-value=14 Score=34.27 Aligned_cols=31 Identities=13% Similarity=0.009 Sum_probs=24.6
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHH
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAME 229 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~ 229 (395)
.+..++...++. +..++|||+|=+.|+.++.
T Consensus 65 al~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 65 AAWRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 345556777885 9999999999998888764
No 259
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=56.61 E-value=94 Score=30.35 Aligned_cols=72 Identities=15% Similarity=0.235 Sum_probs=41.7
Q ss_pred CCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCccChhhhHHHHHHHHHHCCCC-Cc
Q 016103 141 TNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGA---GIHSFDTNGITSLSQYVKPLTDFLEKLPDA-EK 211 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~ 211 (395)
+.+||+++-. +..+| ..-...|.+.|+.|+-++ +|+ |... .....++++.++.+...+....+. .+
T Consensus 116 ~~pvvi~Pam--n~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~ 190 (399)
T PRK05579 116 TAPVLVAPAM--NTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKR 190 (399)
T ss_pred CCCEEEEeCC--ChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCE
Confidence 4456666643 33343 456677888899988665 343 2221 123457788888887777543332 35
Q ss_pred EEEEEe
Q 016103 212 VILVGH 217 (395)
Q Consensus 212 v~lvGh 217 (395)
+.+-|-
T Consensus 191 vlITgG 196 (399)
T PRK05579 191 VLITAG 196 (399)
T ss_pred EEEeCC
Confidence 555565
No 260
>PF03283 PAE: Pectinacetylesterase
Probab=55.68 E-value=74 Score=30.61 Aligned_cols=35 Identities=17% Similarity=0.309 Sum_probs=24.7
Q ss_pred CcEEEEEeChhHHHHHHHHH----HCCCCcceEEEEccc
Q 016103 210 EKVILVGHDFGGACISYAME----LFPFKISKAVFIAAA 244 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~----~~p~~V~~lVli~~~ 244 (395)
++|+|.|.|.||.-++..+. .+|..++-..+.++.
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 58999999999998877553 467545545555543
No 261
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=54.12 E-value=1.1e+02 Score=24.12 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=50.5
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
.||..|| .-+......++.+....-.+.++++. ...+++++.+.+.++++..+..+.++++--=+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5889999 56666777777776543477788764 12478899999999999886544666665555776
Q ss_pred HHHH
Q 016103 223 CISY 226 (395)
Q Consensus 223 ~a~~ 226 (395)
..-.
T Consensus 71 p~n~ 74 (122)
T cd00006 71 PNNA 74 (122)
T ss_pred HHHH
Confidence 5443
No 262
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=54.08 E-value=85 Score=30.23 Aligned_cols=37 Identities=16% Similarity=0.121 Sum_probs=29.7
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIH 182 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s 182 (395)
|+|+|... +..|..+++.|.++|+.|.++-..+.+..
T Consensus 2 il~~~~~~--p~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNF--PGQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCC--chhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 78999863 34588999999999999999887776543
No 263
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=53.68 E-value=16 Score=33.62 Aligned_cols=31 Identities=19% Similarity=0.051 Sum_probs=23.8
Q ss_pred HHHHHHHCC-CCCcEEEEEeChhHHHHHHHHHH
Q 016103 199 LTDFLEKLP-DAEKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 199 l~~~l~~l~-~~~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
+...+...+ +. +..++|||+|=+.|+.++..
T Consensus 72 l~~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 72 LYLKLKEQGGLK-PDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHHcCCCC-CCEEeecCHHHHHHHHHhCC
Confidence 344555666 85 89999999999988887753
No 264
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=49.48 E-value=1.2e+02 Score=29.14 Aligned_cols=77 Identities=12% Similarity=0.099 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEE-EE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVIL-VG 216 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l-vG 216 (395)
...+.+|++--|...+.+.|...++.+.+.|-.=+++=+||. |..+.....++ ....|..+-+..++ +|++ ..
T Consensus 222 a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~--s~yp~~~~~~l--dl~~i~~lk~~~~~--PV~~d~~ 295 (360)
T PRK12595 222 GRVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGI--RTYEKATRNTL--DISAVPILKQETHL--PVMVDVT 295 (360)
T ss_pred HccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCcc--CCCCCCCCCCc--CHHHHHHHHHHhCC--CEEEeCC
Confidence 345679999999989999999999999887764344444443 33332211222 22233333333454 6777 79
Q ss_pred eChh
Q 016103 217 HDFG 220 (395)
Q Consensus 217 hS~G 220 (395)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9988
No 265
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=48.24 E-value=25 Score=32.91 Aligned_cols=62 Identities=10% Similarity=-0.088 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhh-hHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 155 WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQ-YVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 155 ~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~-~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
..|..+++.|... -..++++-= ...- +.--+.+.|++.++. .-.++|-|+|+.++..++..+
T Consensus 2 ~d~~rl~r~l~~~-~~gLvL~GG-------------G~RG~ahiGvL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGN-SIALVLGGG-------------GARGCAHIGVIKALEEAGIP-VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCC-CEEEEECCh-------------HHHHHHHHHHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 3577888888875 334444311 1222 223566777777885 779999999999999998764
No 266
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=47.28 E-value=1.3e+02 Score=24.92 Aligned_cols=79 Identities=16% Similarity=0.089 Sum_probs=50.3
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeCh
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDF 219 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~ 219 (395)
.++++++-| .....-..+...|...|. +|+.++.+.. ..++.+.+++.|.+++++.+. .++|+|++.
T Consensus 33 ~~v~av~~G--~~~~~~~~l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~~~--~lVl~~~t~ 100 (164)
T PF01012_consen 33 GEVTAVVLG--PAEEAAEALRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEEGP--DLVLFGSTS 100 (164)
T ss_dssp SEEEEEEEE--TCCCHHHHHHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHHT---SEEEEESSH
T ss_pred CeEEEEEEe--cchhhHHHHhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhcCC--CEEEEcCcC
Confidence 355666656 212222334456676786 6898887532 235788899999999999764 688888875
Q ss_pred hH-HHHHHHHHHC
Q 016103 220 GG-ACISYAMELF 231 (395)
Q Consensus 220 Gg-~~a~~~a~~~ 231 (395)
-| -++-.+|.+.
T Consensus 101 ~g~~la~~lA~~L 113 (164)
T PF01012_consen 101 FGRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHh
Confidence 44 4666777653
No 267
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=46.74 E-value=1e+02 Score=26.73 Aligned_cols=76 Identities=18% Similarity=0.151 Sum_probs=49.3
Q ss_pred hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--
Q 016103 156 CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF-- 233 (395)
Q Consensus 156 ~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~-- 233 (395)
......+.+.++++.++.+|-+|... .-.+..+.+..+++..... .++||=-+..+.-.+..+..+-+
T Consensus 71 ~~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~~~ 140 (196)
T PF00448_consen 71 IAREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYEAF 140 (196)
T ss_dssp HHHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhhcc
Confidence 34445566677789999999987642 3356667777777777665 77777666666666654444322
Q ss_pred CcceEEEE
Q 016103 234 KISKAVFI 241 (395)
Q Consensus 234 ~V~~lVli 241 (395)
.+.++|+-
T Consensus 141 ~~~~lIlT 148 (196)
T PF00448_consen 141 GIDGLILT 148 (196)
T ss_dssp STCEEEEE
T ss_pred cCceEEEE
Confidence 36788763
No 268
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.85 E-value=1.5e+02 Score=26.83 Aligned_cols=42 Identities=10% Similarity=0.037 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA 179 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~ 179 (395)
...+.+|++--|...+.+.|...++.+.+.|-.=+++=+||.
T Consensus 119 a~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 119 SHIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred HccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 345789999999999999999999999988875455555665
No 269
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=45.79 E-value=31 Score=29.02 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=26.5
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
-+.+.|++.++. .-.++|-|.|+.++..++...+
T Consensus 15 Gvl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 15 GVAKALRERGPL-IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 455566666775 7899999999999999988643
No 270
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=45.69 E-value=53 Score=28.43 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCCCCh---hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH
Q 016103 140 ETNHFVLVHGGGFGA---WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~---~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 205 (395)
..++|+++||..+.. ..-..+.+.|.+.|..+...-+||.|..-. ......+..+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~---~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFG---NPENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTT---SHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCC---CchhHHHHHHHHHHHHHH
Confidence 578999999986543 344567788888887777777776554211 112233555566666653
No 271
>PRK10279 hypothetical protein; Provisional
Probab=45.67 E-value=31 Score=32.25 Aligned_cols=33 Identities=15% Similarity=-0.007 Sum_probs=26.4
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
-+.+.|++.++. .-.++|-|+|+.++..+|...
T Consensus 22 GVL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 22 GVINALKKVGIE-IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCC
Confidence 455666667885 789999999999999998754
No 272
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=45.47 E-value=20 Score=30.71 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=25.9
Q ss_pred CeEEEEcC---CCCChhhHHHHHHHHHhCCCEEEEEc
Q 016103 142 NHFVLVHG---GGFGAWCWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 142 ~~vv~~HG---~~~~~~~~~~~~~~L~~~G~~v~~~d 175 (395)
..||++|. ...+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 35999994 23344567889999999999998875
No 273
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=44.60 E-value=2.4e+02 Score=26.12 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=45.2
Q ss_pred eEEEEcCC--CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC--------ccChhhhH---HHHHHHHHHCCCC
Q 016103 143 HFVLVHGG--GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNG--------ITSLSQYV---KPLTDFLEKLPDA 209 (395)
Q Consensus 143 ~vv~~HG~--~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~--------~~~~~~~~---~~l~~~l~~l~~~ 209 (395)
.+++++|+ |+.......+++.|.++|+.|..+...+.......... ......+. ..+..++.....+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd 81 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPIDATIILNLNMSKNPLSFLLALWKLRKILRQFKPD 81 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchhhccceEEecccccchhhHHHHHHHHHHHHhcCCC
Confidence 34555654 44445667889999999999888876543222110000 00111111 2244455555543
Q ss_pred CcEEEEEeChhHHHHHHHHHH
Q 016103 210 EKVILVGHDFGGACISYAMEL 230 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~~ 230 (395)
++..|+....+...++..
T Consensus 82 ---iv~~~~~~~~~~~~l~~~ 99 (360)
T cd04951 82 ---VVHAHMFHANIFARLLRL 99 (360)
T ss_pred ---EEEEcccchHHHHHHHHh
Confidence 666788776655555544
No 274
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=44.52 E-value=84 Score=26.47 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=43.0
Q ss_pred CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCC------ccChhhhHHHHHHHHHHCCCC
Q 016103 151 GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNG------ITSLSQYVKPLTDFLEKLPDA 209 (395)
Q Consensus 151 ~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~~l~~~l~~l~~~ 209 (395)
--+...|+.....+.+-|++.+++-.-|++....-+.. .....+.++.+.+..+..|.+
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 34667899999999999999999988888765422221 123456777788888888874
No 275
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=44.09 E-value=34 Score=29.30 Aligned_cols=33 Identities=15% Similarity=0.030 Sum_probs=24.8
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
-+.+.|++.++. .-.++|-|.||.+|..++..+
T Consensus 16 Gvl~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 16 GALKALEEAGIL-KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHHcCCC-cceEEEECHHHHHHHHHHcCC
Confidence 344455556664 679999999999999998743
No 276
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=43.60 E-value=70 Score=25.98 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=45.2
Q ss_pred CCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCC------------CCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 149 GGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFD------------TNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 149 G~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~------------~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
+.|+.......+++.|.++|+.|.++-...-+..... .......-.....+..+++....+ ++..
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D---iVh~ 86 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPD---IVHI 86 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-S---EEEC
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCC---eEEe
Confidence 4455556788899999999999998855443322211 000011112234555666655543 4456
Q ss_pred eChhHHHHHHHHHHCCCCcceEEEEc
Q 016103 217 HDFGGACISYAMELFPFKISKAVFIA 242 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~p~~V~~lVli~ 242 (395)
|.........++.. .+..+..+-
T Consensus 87 ~~~~~~~~~~~~~~---~~~~v~~~H 109 (177)
T PF13439_consen 87 HGPPAFWIALLACR---KVPIVYTIH 109 (177)
T ss_dssp CTTHCCCHHHHHHH---CSCEEEEE-
T ss_pred cccchhHHHHHhcc---CCCEEEEeC
Confidence 66665544444444 344454443
No 277
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=42.75 E-value=81 Score=28.83 Aligned_cols=73 Identities=8% Similarity=0.039 Sum_probs=50.9
Q ss_pred CCCCeEEEEcCCCCCh--hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 139 LETNHFVLVHGGGFGA--WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~--~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
...|+||++.|+-++. ..-..+...|..+|++|.++.-|. +-+..-..+-.+-.++.....+.|+=
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt------------~eE~~~p~lWRfw~~lP~~G~i~IF~ 120 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS------------AEELDHDFLWRIHKALPERGEIGIFN 120 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcCchHHHHHHhCCCCCeEEEEc
Confidence 3468999999995544 467889999999999999996541 12222334666777776556888887
Q ss_pred eChhHHH
Q 016103 217 HDFGGAC 223 (395)
Q Consensus 217 hS~Gg~~ 223 (395)
-||=+-+
T Consensus 121 RSWY~~v 127 (264)
T TIGR03709 121 RSHYEDV 127 (264)
T ss_pred Cccccch
Confidence 7764443
No 278
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=42.73 E-value=2.4e+02 Score=26.68 Aligned_cols=79 Identities=18% Similarity=0.125 Sum_probs=48.0
Q ss_pred EEEcCCCCChhhHHHHHHHHHhCC--CEEEEEcC--CCCCCC-----------CCCCCCccChhhhHHHHHHHHHHCCCC
Q 016103 145 VLVHGGGFGAWCWYKTIALLEEGG--FKVTAIDL--TGAGIH-----------SFDTNGITSLSQYVKPLTDFLEKLPDA 209 (395)
Q Consensus 145 v~~HG~~~~~~~~~~~~~~L~~~G--~~v~~~d~--~G~G~s-----------~~~~~~~~~~~~~~~~l~~~l~~l~~~ 209 (395)
|+++|+|+-......+++.+.... +.|++++- |+.... ........+..+.++.|...++.....
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 777888877777777777665542 56666662 221100 000112235666677777777766423
Q ss_pred CcEEEEEeChhHHH
Q 016103 210 EKVILVGHDFGGAC 223 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~ 223 (395)
.+++||=|++=|..
T Consensus 137 ~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 137 PPLYLVIHNIDGPS 150 (326)
T ss_pred CceEEEEECCCChh
Confidence 59999999987765
No 279
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=42.51 E-value=2.1e+02 Score=26.33 Aligned_cols=76 Identities=14% Similarity=0.208 Sum_probs=47.2
Q ss_pred hHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEE-EeChhHHHHHHHHHHCCC
Q 016103 156 CWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILV-GHDFGGACISYAMELFPF 233 (395)
Q Consensus 156 ~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv-GhS~Gg~~a~~~a~~~p~ 233 (395)
.+......+.. .++.++.+|-+|.... -.+..+.+..+++..... .++|| .-++++.-+...+..|..
T Consensus 141 ~l~~~l~~l~~~~~~D~ViIDt~Gr~~~---------~~~~l~el~~~~~~~~~~-~~~LVl~a~~~~~d~~~~~~~f~~ 210 (270)
T PRK06731 141 AMTRALTYFKEEARVDYILIDTAGKNYR---------ASETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKD 210 (270)
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCcC---------CHHHHHHHHHHHhhhCCC-eEEEEEcCccCHHHHHHHHHHhCC
Confidence 34444455543 3699999999986432 133445556666655554 55655 456788888888877543
Q ss_pred -CcceEEEE
Q 016103 234 -KISKAVFI 241 (395)
Q Consensus 234 -~V~~lVli 241 (395)
.+.++|+-
T Consensus 211 ~~~~~~I~T 219 (270)
T PRK06731 211 IHIDGIVFT 219 (270)
T ss_pred CCCCEEEEE
Confidence 46677763
No 280
>PRK14974 cell division protein FtsY; Provisional
Probab=42.45 E-value=1.6e+02 Score=28.07 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=46.1
Q ss_pred HHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--CcceEEE
Q 016103 163 LLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF--KISKAVF 240 (395)
Q Consensus 163 ~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~lVl 240 (395)
.....|+.++.+|-+|... +-..+.+.+..+.+....+ .+++|.-+.-|.-++..+..+.+ .+.++|+
T Consensus 217 ~~~~~~~DvVLIDTaGr~~---------~~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMH---------TDANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HHHhCCCCEEEEECCCccC---------CcHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 3344679999999887543 2345556667777766665 77788777777777766665432 4667776
Q ss_pred E
Q 016103 241 I 241 (395)
Q Consensus 241 i 241 (395)
-
T Consensus 287 T 287 (336)
T PRK14974 287 T 287 (336)
T ss_pred e
Confidence 4
No 281
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=42.29 E-value=32 Score=31.53 Aligned_cols=34 Identities=24% Similarity=0.379 Sum_probs=29.1
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEc
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d 175 (395)
..||++|-...+......++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 3688999877777788999999999999998875
No 282
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=41.56 E-value=33 Score=30.42 Aligned_cols=35 Identities=26% Similarity=0.306 Sum_probs=28.4
Q ss_pred CCeEEEEcCC-CCChhhHHHHHHHHHhCCCEEEEEc
Q 016103 141 TNHFVLVHGG-GFGAWCWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 141 ~~~vv~~HG~-~~~~~~~~~~~~~L~~~G~~v~~~d 175 (395)
...||++|.. ..+......+++.|.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 3469999974 4556788999999999999998875
No 283
>TIGR03586 PseI pseudaminic acid synthase.
Probab=41.30 E-value=2.3e+02 Score=26.85 Aligned_cols=83 Identities=14% Similarity=0.141 Sum_probs=51.7
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
...+.|||+.-|. .+...|...++.+.+.|. .|+... +.|..|... . +-....|..+-+..+ -+|.+..
T Consensus 131 a~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~-~--~~nL~~i~~lk~~f~--~pVG~SD 200 (327)
T TIGR03586 131 AKTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPL-E--DANLRTIPDLAERFN--VPVGLSD 200 (327)
T ss_pred HhcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCc-c--cCCHHHHHHHHHHhC--CCEEeeC
Confidence 3456789999998 588999999999988777 465555 233333211 1 111223333334444 3788899
Q ss_pred eChhHHHHHHHHHH
Q 016103 217 HDFGGACISYAMEL 230 (395)
Q Consensus 217 hS~Gg~~a~~~a~~ 230 (395)
|+.|-.+++.+.+.
T Consensus 201 Ht~G~~~~~aAva~ 214 (327)
T TIGR03586 201 HTLGILAPVAAVAL 214 (327)
T ss_pred CCCchHHHHHHHHc
Confidence 99997666555543
No 284
>PRK09936 hypothetical protein; Provisional
Probab=40.63 E-value=97 Score=28.65 Aligned_cols=52 Identities=13% Similarity=0.104 Sum_probs=38.4
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCC
Q 016103 153 GAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDA 209 (395)
Q Consensus 153 ~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~ 209 (395)
+...|+.+.+.+...|++.+++.+-++|.++... -+-+...+.+.....|++
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~-----~~g~La~~l~~A~~~Gl~ 87 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG-----QRGWLAKRLAAAQQAGLK 87 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc-----chHHHHHHHHHHHHcCCE
Confidence 4568999999999999999999999999885322 244445555555555653
No 285
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=40.38 E-value=2.1e+02 Score=27.84 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=53.0
Q ss_pred CeEEEEcCCCC---ChhhHHHHHHHHHhCCCEEEEEcCCCC--CCCCCCCCCccChhhhHHHHHHHHHH---CCCCCcEE
Q 016103 142 NHFVLVHGGGF---GAWCWYKTIALLEEGGFKVTAIDLTGA--GIHSFDTNGITSLSQYVKPLTDFLEK---LPDAEKVI 213 (395)
Q Consensus 142 ~~vv~~HG~~~---~~~~~~~~~~~L~~~G~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~~l~~~l~~---l~~~~~v~ 213 (395)
.+||+++-... .......-...|.+.|+.|+-+.---+ |... .....++++.++.+...+.. +.- .++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~~~-~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDLEG-KRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhccccCC-ceEE
Confidence 45666665321 122345566778888888776653211 2221 12345788888888877754 322 3555
Q ss_pred EEEe---------------C---hhHHHHHHHHHHCCCCcceEEEEccc
Q 016103 214 LVGH---------------D---FGGACISYAMELFPFKISKAVFIAAA 244 (395)
Q Consensus 214 lvGh---------------S---~Gg~~a~~~a~~~p~~V~~lVli~~~ 244 (395)
+.|- | +|..+|.+++.+ =..++++...
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~----Ga~V~~~~g~ 234 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKR----GADVTLITGP 234 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHC----CCEEEEeCCC
Confidence 5565 3 555566665553 3455666543
No 286
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=40.38 E-value=37 Score=31.71 Aligned_cols=34 Identities=12% Similarity=0.054 Sum_probs=26.0
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
-|.+.|++.++. .-+|.|-|+|+.++..+|..+.
T Consensus 28 GVl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIP-IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCC-ccEEEecCHHHHHHHHHHcCCC
Confidence 345555566664 7899999999999999988543
No 287
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=40.08 E-value=46 Score=29.50 Aligned_cols=33 Identities=9% Similarity=-0.042 Sum_probs=24.8
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
-+.+.|++.++. .-.++|-|.|+.+|..+|...
T Consensus 17 GvL~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 17 GFLAALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 344555556664 668999999999999998644
No 288
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=40.08 E-value=2.1e+02 Score=27.35 Aligned_cols=79 Identities=16% Similarity=0.048 Sum_probs=51.5
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
-+++++|+.++.+....+++.+...+..|-.+.+--.|.+.... .+ ++.++.+.+++...|+. +.+..|.|-=
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~~---ps-~e~i~~f~~~L~~~Gi~---vtvR~~~G~d 331 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQR---PS-PKRIQAFQRVLEQRGVA---VSVRASRGLD 331 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCCC---CC-HHHHHHHHHHHHHCCCe---EEEeCCCCCc
Confidence 37899999999999999998887654444444442233332211 22 34455667777777875 6789999976
Q ss_pred HHHHHH
Q 016103 223 CISYAM 228 (395)
Q Consensus 223 ~a~~~a 228 (395)
+..++.
T Consensus 332 i~aaCG 337 (345)
T PRK14457 332 ANAACG 337 (345)
T ss_pred hhhccc
Confidence 665544
No 289
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=39.77 E-value=45 Score=30.62 Aligned_cols=33 Identities=12% Similarity=-0.043 Sum_probs=26.5
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
-+.+.+++.++. .-.++|-|+|+.++..+|...
T Consensus 27 GVL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 27 GILQALEEAGIP-IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHHcCCC-ccEEEEECHHHHHHHHHHcCC
Confidence 456666777775 778999999999999998754
No 290
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=39.60 E-value=33 Score=33.34 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=40.0
Q ss_pred CccEEEEEcCCCCccCHHHHHHHHhhCCCCeEEEecCCCCCCcccC-----hHHHHHHHHHHhcCC
Q 016103 333 SVRRFYIETPEDNAIPIALQQSMINSSPPEKVFRLKGADHSPFFSK-----PQALHKLLVEISKLP 393 (395)
Q Consensus 333 ~~PvliI~G~~D~~vp~~~~~~l~~~l~~~~~~~i~~~GH~~~~e~-----p~~v~~~I~~fl~~~ 393 (395)
.-.+|+|+|++|+..-... .+-+.-.++.+++.||++|..-+.. -++....|.+|..-.
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaGv~ 414 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAGVA 414 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999763221 1111224678899999999876543 345778888887643
No 291
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=39.39 E-value=1.2e+02 Score=27.10 Aligned_cols=72 Identities=13% Similarity=0.198 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCCCCh--hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 140 ETNHFVLVHGGGFGA--WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~--~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
+.|+||++.|+.++. ..-..+...|..+|+.|.++.-|- ..+..-..+-.+-..+.....+.|+=-
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt------------~eE~~~p~lwRfw~~lP~~G~i~IF~r 96 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPS------------DRERTQWYFQRYVQHLPAAGEIVLFDR 96 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC------------HHHHcChHHHHHHHhCCCCCeEEEEeC
Confidence 358999999995544 467889999999999999987651 122223356677777766568888887
Q ss_pred ChhHHH
Q 016103 218 DFGGAC 223 (395)
Q Consensus 218 S~Gg~~ 223 (395)
|+=+-+
T Consensus 97 SwY~~~ 102 (230)
T TIGR03707 97 SWYNRA 102 (230)
T ss_pred chhhhH
Confidence 775554
No 292
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=38.49 E-value=2.2e+02 Score=26.73 Aligned_cols=35 Identities=14% Similarity=0.126 Sum_probs=26.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCC
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTG 178 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G 178 (395)
++...|.|++-..+..+++.|.+.||.|.++-..+
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~ 39 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTAR 39 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCC
Confidence 44445677666667789999999999988876544
No 293
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=37.89 E-value=38 Score=34.47 Aligned_cols=32 Identities=19% Similarity=0.302 Sum_probs=25.5
Q ss_pred HHHHH-HHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 199 LTDFL-EKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 199 l~~~l-~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
+.+++ +..|+. +-.++|||+|=+.|+..|.-.
T Consensus 254 La~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 34455 578886 999999999999999888654
No 294
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.57 E-value=44 Score=30.73 Aligned_cols=53 Identities=15% Similarity=0.279 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHCCCC--CcEEEEEeChhHHHHHHHHH---HCCCCcceEEEEccccc
Q 016103 194 QYVKPLTDFLEKLPDA--EKVILVGHDFGGACISYAME---LFPFKISKAVFIAAAML 246 (395)
Q Consensus 194 ~~~~~l~~~l~~l~~~--~~v~lvGhS~Gg~~a~~~a~---~~p~~V~~lVli~~~~~ 246 (395)
.+.+.|...+..+..+ .+++|.|-|+|++-+...-. ..-+++.+.++.+++..
T Consensus 91 aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 91 ALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 3444555556666432 48999999999986655432 23357999999988753
No 295
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=36.64 E-value=1.4e+02 Score=26.33 Aligned_cols=37 Identities=14% Similarity=0.214 Sum_probs=28.1
Q ss_pred CCCeEEEEcCCCCChhh--H-HHHHHHHHhCCCEEEEEcC
Q 016103 140 ETNHFVLVHGGGFGAWC--W-YKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~--~-~~~~~~L~~~G~~v~~~d~ 176 (395)
..+.|.|++=.+.+... | ....+.|.+.|+.|.-+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36799999987665543 2 4566789999999988886
No 296
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=36.39 E-value=2.7e+02 Score=27.51 Aligned_cols=70 Identities=11% Similarity=0.221 Sum_probs=46.7
Q ss_pred HHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--CcceE
Q 016103 161 IALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF--KISKA 238 (395)
Q Consensus 161 ~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~l 238 (395)
.+.+...+|.++.+|-+|.-. .-+.+.+.+..+.+....+ .+++|--++-|.-+...+..+-+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 344555689999999998532 2244556666666666665 78888777777767666666533 36677
Q ss_pred EE
Q 016103 239 VF 240 (395)
Q Consensus 239 Vl 240 (395)
|+
T Consensus 245 Il 246 (429)
T TIGR01425 245 II 246 (429)
T ss_pred EE
Confidence 66
No 297
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.07 E-value=1.7e+02 Score=28.77 Aligned_cols=69 Identities=17% Similarity=0.225 Sum_probs=50.5
Q ss_pred HHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCC--cceEEE
Q 016103 163 LLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPFK--ISKAVF 240 (395)
Q Consensus 163 ~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~--V~~lVl 240 (395)
.+.+.+|.|+.+|--|.- .--+++.+.+.++-+.+.++ .+.+|--++=|.-|...|..+-+. |.++|+
T Consensus 177 ~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 334445667777755421 12366777888888888886 999999999999999999887664 678777
Q ss_pred E
Q 016103 241 I 241 (395)
Q Consensus 241 i 241 (395)
-
T Consensus 247 T 247 (451)
T COG0541 247 T 247 (451)
T ss_pred E
Confidence 4
No 298
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=35.80 E-value=2.6e+02 Score=25.49 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=46.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCE-EEEEcCCCCCCCCC-CC-CCccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFK-VTAIDLTGAGIHSF-DT-NGITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~-v~~~d~~G~G~s~~-~~-~~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
...+.+|++--|...+.+.|...++.+.+.|-. +++.+ +|. |.. +. ....++. .+..+-+..+. +|++
T Consensus 129 a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-rG~--s~y~~~~~~~~dl~----~i~~lk~~~~~--pV~~ 199 (260)
T TIGR01361 129 GKQGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-RGI--RTFEKATRNTLDLS----AVPVLKKETHL--PIIV 199 (260)
T ss_pred hcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-CCC--CCCCCCCcCCcCHH----HHHHHHHhhCC--CEEE
Confidence 345779999999998999999999999887764 55444 433 332 11 1112222 22222233453 7888
Q ss_pred -EEeChh
Q 016103 215 -VGHDFG 220 (395)
Q Consensus 215 -vGhS~G 220 (395)
.+||.|
T Consensus 200 ds~Hs~G 206 (260)
T TIGR01361 200 DPSHAAG 206 (260)
T ss_pred cCCCCCC
Confidence 799988
No 299
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.58 E-value=53 Score=28.84 Aligned_cols=34 Identities=15% Similarity=0.035 Sum_probs=26.6
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
-+.+.|.+.++. .-.++|.|.|+.+|..++...+
T Consensus 15 Gvl~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 15 GVLKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 355556666774 7799999999999999998654
No 300
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=35.09 E-value=1.1e+02 Score=27.35 Aligned_cols=38 Identities=21% Similarity=0.144 Sum_probs=27.2
Q ss_pred CCCeEEEEcCCCC--ChhhH-HHHHHHHHhCCCEEEEEcCC
Q 016103 140 ETNHFVLVHGGGF--GAWCW-YKTIALLEEGGFKVTAIDLT 177 (395)
Q Consensus 140 ~~~~vv~~HG~~~--~~~~~-~~~~~~L~~~G~~v~~~d~~ 177 (395)
.+|.|+||+=... ....| ....+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 5688999987663 33333 44666788889999988865
No 301
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=34.93 E-value=3.4e+02 Score=24.43 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=47.3
Q ss_pred eEEEEcCC--CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCC-------------CccChhhhHHHHHHHHHHCC
Q 016103 143 HFVLVHGG--GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTN-------------GITSLSQYVKPLTDFLEKLP 207 (395)
Q Consensus 143 ~vv~~HG~--~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~-------------~~~~~~~~~~~l~~~l~~l~ 207 (395)
.+++++++ |+.......+++.|.+.|+.|..+............. ...........+..++....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKEK 81 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhcC
Confidence 45666665 4455667889999988899988887654333211110 11122333456666666665
Q ss_pred CCCcEEEEEeCh-hHHHHHHHHH
Q 016103 208 DAEKVILVGHDF-GGACISYAME 229 (395)
Q Consensus 208 ~~~~v~lvGhS~-Gg~~a~~~a~ 229 (395)
.+ +++.|+. ...+...+..
T Consensus 82 ~d---ii~~~~~~~~~~~~~~~~ 101 (353)
T cd03811 82 PD---VVISHLTTTPNVLALLAA 101 (353)
T ss_pred CC---EEEEcCccchhHHHHHHh
Confidence 54 5556665 4444444444
No 302
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=34.61 E-value=2e+02 Score=25.13 Aligned_cols=32 Identities=28% Similarity=0.324 Sum_probs=23.5
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCC
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLT 177 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~ 177 (395)
+..+-|. ++..=+.++..|+.+|++|++.|+.
T Consensus 16 ~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGG--SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecC--CchHHHHHHHHHHhcCcEEEEeecc
Confidence 4455553 3444577889999999999999874
No 303
>PHA02114 hypothetical protein
Probab=34.53 E-value=53 Score=24.82 Aligned_cols=33 Identities=36% Similarity=0.472 Sum_probs=28.7
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEc
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d 175 (395)
+||+=--+..+..-|-.++..|.+.||.|++-.
T Consensus 84 tivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 84 TIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred eEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 677777788899999999999999999999754
No 304
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=34.33 E-value=65 Score=27.15 Aligned_cols=33 Identities=15% Similarity=0.014 Sum_probs=24.4
Q ss_pred HHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCC
Q 016103 199 LTDFLEKLPDAEKVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 199 l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
+.+.+++.++. .-.++|-|.|+.+|..++...+
T Consensus 18 vl~~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 18 VLRALEEEGIE-IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHCCCC-eeEEEEeCHHHHHHHHHHcCCC
Confidence 34444555664 6689999999999999887543
No 305
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=33.91 E-value=2e+02 Score=25.42 Aligned_cols=62 Identities=21% Similarity=0.254 Sum_probs=38.2
Q ss_pred CCCCeEEEEcCCCCChhh-HHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEE
Q 016103 139 LETNHFVLVHGGGFGAWC-WYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILV 215 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~-~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 215 (395)
....+|++.||...++.. |..+-..|.++|| .|++...-|+- .++.+...++.-++. .|.|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP--------------~~d~vi~~l~~~~~~-~v~L~ 199 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP--------------LVDTVIEYLRKNGIK-EVHLI 199 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC--------------cHHHHHHHHHHcCCc-eEEEe
Confidence 445689999998776654 4445556677788 55555543321 134566666666775 66554
No 306
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=33.38 E-value=86 Score=26.14 Aligned_cols=36 Identities=17% Similarity=-0.003 Sum_probs=26.8
Q ss_pred CCeEEEEcCCCCChhh--HHHHHHHHHhCCCEEEEEcC
Q 016103 141 TNHFVLVHGGGFGAWC--WYKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~--~~~~~~~L~~~G~~v~~~d~ 176 (395)
.+.||++-|+.++... -..+.+.|.+.|+.|+.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3679999999776653 35577788888999999984
No 307
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=32.73 E-value=2.3e+02 Score=26.19 Aligned_cols=59 Identities=22% Similarity=0.247 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCE--EEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHH
Q 016103 157 WYKTIALLEEGGFK--VTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACI 224 (395)
Q Consensus 157 ~~~~~~~L~~~G~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a 224 (395)
+...++.+.+.|+. =|.+| ||.|..... ..+ -+....+..+ ..++ .-+++|+|-=.++.
T Consensus 165 l~~~i~~a~~~GI~~~~IilD-PGiGF~k~~---~~n-~~ll~~l~~l-~~lg---~Pilvg~SRKsfig 225 (282)
T PRK11613 165 FIEQIARCEAAGIAKEKLLLD-PGFGFGKNL---SHN-YQLLARLAEF-HHFN---LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHHcCCChhhEEEe-CCCCcCCCH---HHH-HHHHHHHHHH-HhCC---CCEEEEecccHHHH
Confidence 34455566777885 77888 477754311 011 1122222222 3344 45899999555443
No 308
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=32.51 E-value=78 Score=26.56 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=24.4
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
-+.+.|++.++. .-.++|-|.|+.+|..++...
T Consensus 17 Gvl~~L~~~~~~-~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 17 GVLKALEEAGIP-IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHcCCC-eeEEEEECHHHHHHHHHHcCC
Confidence 344555555664 668999999999999988643
No 309
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=32.00 E-value=2.3e+02 Score=24.49 Aligned_cols=90 Identities=9% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCeEEEEcCCCCChh------hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 141 TNHFVLVHGGGFGAW------CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~------~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
+++|||.|....... .+..+.+.+.++|..|+++..- ...+...+.+++..... .++ ++-+
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D----------~~~~~~~~~~~i~~~~~-~~~--~fpi 92 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVD----------SVESHIKWIEDIEEYTG-VEI--PFPI 92 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECC----------CHHHHHHHHhhHHHhcC-CCC--ceeE
Confidence 456777776554443 2455667788889999988641 11234445555555443 343 3333
Q ss_pred EEeChhHHHHHHHHHHCC-----CCcceEEEEccc
Q 016103 215 VGHDFGGACISYAMELFP-----FKISKAVFIAAA 244 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~~~p-----~~V~~lVli~~~ 244 (395)
+ ....+.++-.+....+ .-+.+.++|++-
T Consensus 93 l-~D~~~~ia~~yg~~~~~~~~~~~~r~~fiID~~ 126 (203)
T cd03016 93 I-ADPDREVAKLLGMIDPDAGSTLTVRAVFIIDPD 126 (203)
T ss_pred E-ECchHHHHHHcCCccccCCCCceeeEEEEECCC
Confidence 3 3445566655544332 234567777764
No 310
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=31.34 E-value=73 Score=26.82 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=29.6
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEc
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d 175 (395)
....+.|+++-|-|.+...=.-.+++|..+|+.|.++=
T Consensus 22 ~~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~~ 59 (169)
T PF03853_consen 22 SPKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVYL 59 (169)
T ss_dssp CCTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEEE
Confidence 34567888888998888888889999999999988843
No 311
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=30.73 E-value=49 Score=32.99 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=23.0
Q ss_pred eEEEecCCCCCCcccChHHHHHHHHHHhc
Q 016103 363 KVFRLKGADHSPFFSKPQALHKLLVEISK 391 (395)
Q Consensus 363 ~~~~i~~~GH~~~~e~p~~v~~~I~~fl~ 391 (395)
.+.+++ +||++++++|+...+.+..|+.
T Consensus 462 ~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 462 FLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred EEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 445555 7999999999999999888865
No 312
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=30.66 E-value=94 Score=28.92 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=44.5
Q ss_pred ccCCccCCCccccccccccCCCCCCCeEEEEcCCCCChhhHH---HHHHHHHhCCCEEEEEcCC-CCCCC
Q 016103 117 LTDPLLQPHQLLNLNRDEKLPDLETNHFVLVHGGGFGAWCWY---KTIALLEEGGFKVTAIDLT-GAGIH 182 (395)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~HG~~~~~~~~~---~~~~~L~~~G~~v~~~d~~-G~G~s 182 (395)
+........+|+++...++..+.+.. +-++||+......+. .+.+.|.+++=.|+..|.+ ++|.+
T Consensus 72 i~~QL~~GvRylDlRi~~~~~~~D~~-~~i~HGl~~~~~v~~vL~ev~~Fl~~h~eEVViL~f~~~fg~~ 140 (306)
T KOG4306|consen 72 IREQLVAGVRYLDLRIGYKLMDPDRE-FYICHGLFSTYPVLEVLNEVRQFLSEHPEEVVILEFRHFFGMT 140 (306)
T ss_pred hHHHHhhcceEEEEEeeeccCCCCcc-eEEEeeccccccHHHHHHHHHHHHHhCCCEEEEEeccchhccC
Confidence 33444556677776666655544333 999999988777664 4566788888889999987 44443
No 313
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=30.65 E-value=1.2e+02 Score=28.17 Aligned_cols=17 Identities=12% Similarity=-0.023 Sum_probs=15.2
Q ss_pred EEEEeChhHHHHHHHHH
Q 016103 213 ILVGHDFGGACISYAME 229 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~ 229 (395)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 67899999999999875
No 314
>PRK10867 signal recognition particle protein; Provisional
Probab=30.35 E-value=4.9e+02 Score=25.79 Aligned_cols=71 Identities=14% Similarity=0.221 Sum_probs=39.9
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--Ccce
Q 016103 160 TIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF--KISK 237 (395)
Q Consensus 160 ~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~~ 237 (395)
........+|.++.+|-+|.... -+...+.+..+.+..... .+++|.-++-|.-+...+..+-+ .+.+
T Consensus 175 a~~~a~~~~~DvVIIDTaGrl~~---------d~~lm~eL~~i~~~v~p~-evllVlda~~gq~av~~a~~F~~~~~i~g 244 (433)
T PRK10867 175 ALEEAKENGYDVVIVDTAGRLHI---------DEELMDELKAIKAAVNPD-EILLVVDAMTGQDAVNTAKAFNEALGLTG 244 (433)
T ss_pred HHHHHHhcCCCEEEEeCCCCccc---------CHHHHHHHHHHHHhhCCC-eEEEEEecccHHHHHHHHHHHHhhCCCCE
Confidence 33444556799999999986432 133344445555545554 55666555555555555554332 2455
Q ss_pred EEE
Q 016103 238 AVF 240 (395)
Q Consensus 238 lVl 240 (395)
+|+
T Consensus 245 iIl 247 (433)
T PRK10867 245 VIL 247 (433)
T ss_pred EEE
Confidence 555
No 315
>PRK06849 hypothetical protein; Provisional
Probab=29.71 E-value=4.2e+02 Score=25.45 Aligned_cols=72 Identities=11% Similarity=0.115 Sum_probs=44.6
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCC--C-------CCCCccChhhhHHHHHHHHHHCCCCCcE
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHS--F-------DTNGITSLSQYVKPLTDFLEKLPDAEKV 212 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~--~-------~~~~~~~~~~~~~~l~~~l~~l~~~~~v 212 (395)
+.|+++ |. +...-..+++.|.+.|++|++.|......+. . .+....+.+++++.|.++++..+++ +
T Consensus 5 ~~VLI~-G~--~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id--~ 79 (389)
T PRK06849 5 KTVLIT-GA--RAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENID--L 79 (389)
T ss_pred CEEEEe-CC--CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCC--E
Confidence 344444 43 3334466788999999999999987533221 0 0011235677889999999988763 4
Q ss_pred EEEEeC
Q 016103 213 ILVGHD 218 (395)
Q Consensus 213 ~lvGhS 218 (395)
++-+.+
T Consensus 80 vIP~~e 85 (389)
T PRK06849 80 LIPTCE 85 (389)
T ss_pred EEECCh
Confidence 444444
No 316
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=28.68 E-value=2e+02 Score=26.60 Aligned_cols=71 Identities=17% Similarity=0.304 Sum_probs=46.9
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC--------CCC--C---CCCC-CccChhhhHHHHHHHHHHC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA--------GIH--S---FDTN-GITSLSQYVKPLTDFLEKL 206 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~--------G~s--~---~~~~-~~~~~~~~~~~l~~~l~~l 206 (395)
-|.|+|.-|.+. ..+.|+..||.|+..||--- |.. - -++. -..+.+.+.+.+.+.++..
T Consensus 252 vPmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 488999988653 45778888999999998421 111 0 0111 1235677778889999999
Q ss_pred CCCCcEEEEEeC
Q 016103 207 PDAEKVILVGHD 218 (395)
Q Consensus 207 ~~~~~v~lvGhS 218 (395)
|.++-+.=+||-
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 876445556774
No 317
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=28.63 E-value=1.1e+02 Score=24.57 Aligned_cols=35 Identities=23% Similarity=0.490 Sum_probs=22.9
Q ss_pred CCCeEEEEcCCCC-------------ChhhHH-----------HHHHHHHhCCCEEEEE
Q 016103 140 ETNHFVLVHGGGF-------------GAWCWY-----------KTIALLEEGGFKVTAI 174 (395)
Q Consensus 140 ~~~~vv~~HG~~~-------------~~~~~~-----------~~~~~L~~~G~~v~~~ 174 (395)
....|||+||-.- +.+.|. ..+..|.+.|++|+++
T Consensus 56 ~y~~viFvHGCFWh~H~c~~a~vPksnt~fWleKi~kNveRD~r~~~~L~~~GwrvlvV 114 (150)
T COG3727 56 KYRCVIFVHGCFWHGHHCYLAKVPKSNTEFWLEKIGKNVERDERDIKRLQQLGWRVLVV 114 (150)
T ss_pred CceEEEEEeeeeccCCccccccCCCcchHHHHHHHhhhhhhhHHHHHHHHHcCCeEEEE
Confidence 3458999999522 122452 2456788889998876
No 318
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=28.56 E-value=3.6e+02 Score=25.99 Aligned_cols=78 Identities=17% Similarity=0.058 Sum_probs=52.0
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHH
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGAC 223 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 223 (395)
.+++.|+.++......+++.+......|=.+.+--.+.+... ..-.+.++.+.+++...|+. +.+..|.|.=+
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~~~~~~~~----~ps~e~i~~F~~~L~~~Gi~---vtvR~~~G~di 355 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNSIVNIKFE----PVCSSTRERFRDRLLDAGLQ---VTVRKSYGTTI 355 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeeccCCCCCCC----CCCHHHHHHHHHHHHHCCCc---EEeeCCCCcch
Confidence 688999999988999999888775444444443323333221 22345566777888888876 88889998766
Q ss_pred HHHHH
Q 016103 224 ISYAM 228 (395)
Q Consensus 224 a~~~a 228 (395)
..++.
T Consensus 356 ~aACG 360 (368)
T PRK14456 356 NAACG 360 (368)
T ss_pred hhcCC
Confidence 55443
No 319
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=28.52 E-value=1.3e+02 Score=24.46 Aligned_cols=42 Identities=26% Similarity=0.251 Sum_probs=27.3
Q ss_pred eEEEEcCCCCChh--hHHHHHHHHHhCCCEEEEEcCCCCCCCCC
Q 016103 143 HFVLVHGGGFGAW--CWYKTIALLEEGGFKVTAIDLTGAGIHSF 184 (395)
Q Consensus 143 ~vv~~HG~~~~~~--~~~~~~~~L~~~G~~v~~~d~~G~G~s~~ 184 (395)
++|.+-|.-.+.. .-..++..|.++||+|.++=+-+||....
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 4677777755554 34779999999999999777767766543
No 320
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=28.50 E-value=1.3e+02 Score=28.59 Aligned_cols=87 Identities=16% Similarity=0.245 Sum_probs=60.3
Q ss_pred CCeEEEEcCCCCChh-------hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEE
Q 016103 141 TNHFVLVHGGGFGAW-------CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~-------~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
...+|++|+...++. .|..+.+.+.++ -.+-.+|+-..|..+. +++..+..+..+++. |. =+
T Consensus 197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG------~~d~DA~avR~F~~~-g~---~~ 265 (427)
T KOG1411|consen 197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASG------DLDKDAQAVRLFVED-GH---EI 265 (427)
T ss_pred CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccC------CchhhHHHHHHHHHc-CC---ce
Confidence 346999998766664 799999888876 4456677777666543 456666677777765 33 37
Q ss_pred EEEeChhHHHHHHHHHHCCCCcceEEEEcc
Q 016103 214 LVGHDFGGACISYAMELFPFKISKAVFIAA 243 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~~p~~V~~lVli~~ 243 (395)
++..|+.=.+.+ |.++|.++-.+|.
T Consensus 266 ~laQSyAKNMGL-----YgERvGa~svvc~ 290 (427)
T KOG1411|consen 266 LLAQSYAKNMGL-----YGERVGALSVVCK 290 (427)
T ss_pred Eeehhhhhhcch-----hhhccceeEEEec
Confidence 777777655443 6688888877774
No 321
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=27.74 E-value=1.1e+02 Score=27.07 Aligned_cols=31 Identities=39% Similarity=0.459 Sum_probs=24.5
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~ 176 (395)
.+.=||++|-|.+.. +..|+++||.|+.+|+
T Consensus 37 ~~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 37 PGGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp TSEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 344688899887765 3578889999999997
No 322
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=27.46 E-value=4.6e+02 Score=25.90 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=41.9
Q ss_pred HHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC--Ccc
Q 016103 159 KTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF--KIS 236 (395)
Q Consensus 159 ~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~--~V~ 236 (395)
...+.+...+|.++.+|-+|.... -+...+.+..+.+.+..+ .+++|--++-|.-+...|..+-+ .+.
T Consensus 173 ~al~~~~~~~~DvVIIDTaGr~~~---------d~~l~~eL~~i~~~~~p~-e~lLVvda~tgq~~~~~a~~f~~~v~i~ 242 (428)
T TIGR00959 173 RALEYAKENGFDVVIVDTAGRLQI---------DEELMEELAAIKEILNPD-EILLVVDAMTGQDAVNTAKTFNERLGLT 242 (428)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccc---------CHHHHHHHHHHHHhhCCc-eEEEEEeccchHHHHHHHHHHHhhCCCC
Confidence 344455556899999999986432 133445555555555554 56666555555555555554432 355
Q ss_pred eEEEE
Q 016103 237 KAVFI 241 (395)
Q Consensus 237 ~lVli 241 (395)
++|+-
T Consensus 243 giIlT 247 (428)
T TIGR00959 243 GVVLT 247 (428)
T ss_pred EEEEe
Confidence 66653
No 323
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=27.41 E-value=2e+02 Score=29.95 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCCCChh---hHHHHHHHHHhCCCEEEEEcCCCCCCC
Q 016103 138 DLETNHFVLVHGGGFGAW---CWYKTIALLEEGGFKVTAIDLTGAGIH 182 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~---~~~~~~~~L~~~G~~v~~~d~~G~G~s 182 (395)
..-+.+++++||.....- .-..+...|...|..|-.+-+|+-|..
T Consensus 548 ~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 548 DNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred cccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 344678999999865543 345677888888988888888765544
No 324
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=27.39 E-value=4e+02 Score=25.29 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCCE---EEEEcCCCCCCCCCCCC-CccChhhhHHHHHHHHHHCCCCCcEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGFK---VTAIDLTGAGIHSFDTN-GITSLSQYVKPLTDFLEKLPDAEKVI 213 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~---v~~~d~~G~G~s~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~v~ 213 (395)
...+.|||+.-|. .+...|...++.+.+.|.. ++...- . |..|.. ...+ ...|..+-+..+ -+|.
T Consensus 130 A~~gkPvilStGm-atl~Ei~~Av~~i~~~G~~~~~i~llhC-~---s~YP~~~~~~n----L~~I~~Lk~~f~--~pVG 198 (329)
T TIGR03569 130 ARFGKPVILSTGM-ATLEEIEAAVGVLRDAGTPDSNITLLHC-T---TEYPAPFEDVN----LNAMDTLKEAFD--LPVG 198 (329)
T ss_pred HhcCCcEEEECCC-CCHHHHHHHHHHHHHcCCCcCcEEEEEE-C---CCCCCCcccCC----HHHHHHHHHHhC--CCEE
Confidence 3456789999998 5888999999999887764 444442 1 222221 1112 223333334444 3888
Q ss_pred EEEeChhHHHHHHHHHH
Q 016103 214 LVGHDFGGACISYAMEL 230 (395)
Q Consensus 214 lvGhS~Gg~~a~~~a~~ 230 (395)
+-+|+.|-.+++.+.+.
T Consensus 199 ~SdHt~G~~~~~aAval 215 (329)
T TIGR03569 199 YSDHTLGIEAPIAAVAL 215 (329)
T ss_pred ECCCCccHHHHHHHHHc
Confidence 89999997666555543
No 325
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=27.10 E-value=1.5e+02 Score=27.36 Aligned_cols=80 Identities=18% Similarity=0.218 Sum_probs=46.1
Q ss_pred EEEEcCCCCChh-hHHHHHHHHHhCCC-------EEEEEcCCCCCCCCCCCCCccChhhhH--------HHHHHHHHHCC
Q 016103 144 FVLVHGGGFGAW-CWYKTIALLEEGGF-------KVTAIDLTGAGIHSFDTNGITSLSQYV--------KPLTDFLEKLP 207 (395)
Q Consensus 144 vv~~HG~~~~~~-~~~~~~~~L~~~G~-------~v~~~d~~G~G~s~~~~~~~~~~~~~~--------~~l~~~l~~l~ 207 (395)
-|++.|.|...- .-+-+...+...|. +++.+|..|-=..+.... ......++ .++.++++.++
T Consensus 27 ~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l-~~~~~~~a~~~~~~~~~~L~e~i~~v~ 105 (279)
T cd05312 27 RILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDL-TPFKKPFARKDEEKEGKSLLEVVKAVK 105 (279)
T ss_pred EEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcc-hHHHHHHHhhcCcccCCCHHHHHHhcC
Confidence 345557665554 34555666666677 899999998533332110 01111222 25677777666
Q ss_pred CCCcEEEEEeCh-hHHHHHHH
Q 016103 208 DAEKVILVGHDF-GGACISYA 227 (395)
Q Consensus 208 ~~~~v~lvGhS~-Gg~~a~~~ 227 (395)
.+ +|||-|- ||.+.-+.
T Consensus 106 pt---vlIG~S~~~g~ft~ev 123 (279)
T cd05312 106 PT---VLIGLSGVGGAFTEEV 123 (279)
T ss_pred CC---EEEEeCCCCCCCCHHH
Confidence 54 9999995 67654333
No 326
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=27.01 E-value=1.6e+02 Score=24.42 Aligned_cols=56 Identities=20% Similarity=0.241 Sum_probs=36.4
Q ss_pred HHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHH
Q 016103 160 TIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYA 227 (395)
Q Consensus 160 ~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~ 227 (395)
+...+.. |-.|++.|.+|- ..+-+++++.+..+-+. | ..=+.+||-|.|=.-++..
T Consensus 60 il~~i~~-~~~vi~Ld~~Gk---------~~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 60 ILAAIPK-GSYVVLLDIRGK---------ALSSEEFADFLERLRDD-G-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHhcCC-CCeEEEEecCCC---------cCChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHHHH
Confidence 3344444 678999999863 34567777776655543 4 3367888999986555544
No 327
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=26.94 E-value=1.6e+02 Score=25.55 Aligned_cols=57 Identities=25% Similarity=0.346 Sum_probs=35.8
Q ss_pred CCeEEEEcCCCCChh---hHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHH
Q 016103 141 TNHFVLVHGGGFGAW---CWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEK 205 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~---~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~ 205 (395)
..+|+++||-.+.-- ......+.|.+.|.+|-.-.++|.|.+- ..+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhh
Confidence 568999999866543 3456778898888888888888766442 24455566666653
No 328
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=26.81 E-value=30 Score=28.85 Aligned_cols=48 Identities=23% Similarity=0.253 Sum_probs=26.6
Q ss_pred cCCCCCCCC--CCCCCccChhhhHHHH----HHHHHHCCC---CCcEEEEEeChhHH
Q 016103 175 DLTGAGIHS--FDTNGITSLSQYVKPL----TDFLEKLPD---AEKVILVGHDFGGA 222 (395)
Q Consensus 175 d~~G~G~s~--~~~~~~~~~~~~~~~l----~~~l~~l~~---~~~v~lvGhS~Gg~ 222 (395)
-+-|||... ...-..++.++++..| ..+.+.++. .+++.|+|.|++..
T Consensus 60 ~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 60 QLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 344666551 1122346788888877 444444422 14999999999887
No 329
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.74 E-value=57 Score=32.12 Aligned_cols=24 Identities=13% Similarity=0.056 Sum_probs=19.6
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCC
Q 016103 211 KVILVGHDFGGACISYAMELFPFK 234 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~ 234 (395)
+-+++|-|.|+.+|..++...++.
T Consensus 102 p~vIsGTSaGAivAal~as~~~ee 125 (421)
T cd07230 102 PRIISGSSAGSIVAAILCTHTDEE 125 (421)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHH
Confidence 338999999999999998865544
No 330
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=26.70 E-value=1.2e+02 Score=31.71 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=50.8
Q ss_pred CCCCeEEEEcCCCCC----------hhhHHHHHHHHHhCCCEEEEEcCCC---CCCCCCCCC-C----ccChhhhHHHHH
Q 016103 139 LETNHFVLVHGGGFG----------AWCWYKTIALLEEGGFKVTAIDLTG---AGIHSFDTN-G----ITSLSQYVKPLT 200 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~----------~~~~~~~~~~L~~~G~~v~~~d~~G---~G~s~~~~~-~----~~~~~~~~~~l~ 200 (395)
.++-+|++.|..... ...|...++.|.++||+++.+|--= .|....+.. - .....+....+.
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~Al 125 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVY 125 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHH
Confidence 345678888887432 3468889999999999999987320 111111111 1 122344667788
Q ss_pred HHHHHCCCCCcEEEEEeC
Q 016103 201 DFLEKLPDAEKVILVGHD 218 (395)
Q Consensus 201 ~~l~~l~~~~~v~lvGhS 218 (395)
-+|++.+...-+.++|.-
T Consensus 126 PILKkyg~pATfFvVg~w 143 (672)
T PRK14581 126 PLLKAYKWSAVLAPVGTW 143 (672)
T ss_pred HHHHHcCCCEEEEEechh
Confidence 899999986556666643
No 331
>PTZ00445 p36-lilke protein; Provisional
Probab=26.66 E-value=3.1e+02 Score=24.24 Aligned_cols=25 Identities=36% Similarity=0.298 Sum_probs=20.3
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEcCC
Q 016103 153 GAWCWYKTIALLEEGGFKVTAIDLT 177 (395)
Q Consensus 153 ~~~~~~~~~~~L~~~G~~v~~~d~~ 177 (395)
..+.-..+.+.|.+.|+++++.|+-
T Consensus 27 ~~~~~~~~v~~L~~~GIk~Va~D~D 51 (219)
T PTZ00445 27 PHESADKFVDLLNECGIKVIASDFD 51 (219)
T ss_pred HHHHHHHHHHHHHHcCCeEEEecch
Confidence 3445667888999999999999984
No 332
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=25.86 E-value=74 Score=28.35 Aligned_cols=28 Identities=25% Similarity=0.274 Sum_probs=21.9
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcC
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~ 176 (395)
=||++|-|.+... ..|+++||.|+.+|+
T Consensus 46 rvLvPgCGkg~D~-----~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSIDM-----LFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHHH-----HHHHhCCCcEEEEec
Confidence 5788887765543 468889999999997
No 333
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=25.45 E-value=2.1e+02 Score=27.37 Aligned_cols=60 Identities=17% Similarity=0.162 Sum_probs=38.1
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD 208 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~ 208 (395)
.+||.+-|.-+++- .+..|.++||.|+.+-+.-+... .....+.++...|...+.+.+|+
T Consensus 5 kV~v~mSGGVDSSV----aA~lLk~QGyeViGl~m~~~~~~---~~~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 5 KVLVGMSGGVDSSV----AAYLLKEQGYEVIGLFMKNWDED---GGGGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred EEEEEccCCHHHHH----HHHHHHHcCCeEEEEEEEeeccC---CCCcCCchhHHHHHHHHHHHhCC
Confidence 45666666443332 23467788999999998866541 12223455666777788888776
No 334
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.32 E-value=2.1e+02 Score=28.64 Aligned_cols=70 Identities=19% Similarity=0.265 Sum_probs=46.5
Q ss_pred HHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHC---------C
Q 016103 162 ALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACISYAMELF---------P 232 (395)
Q Consensus 162 ~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~---------p 232 (395)
++-..+||.|+.+|-.|.=. +-+.+...+..+++.-.++ .|+.||.-+=|.-++.-+..+ |
T Consensus 460 ~~a~~~gfDVvLiDTAGR~~---------~~~~lm~~l~k~~~~~~pd-~i~~vgealvg~dsv~q~~~fn~al~~~~~~ 529 (587)
T KOG0781|consen 460 QEARNQGFDVVLIDTAGRMH---------NNAPLMTSLAKLIKVNKPD-LILFVGEALVGNDSVDQLKKFNRALADHSTP 529 (587)
T ss_pred HHHHhcCCCEEEEecccccc---------CChhHHHHHHHHHhcCCCc-eEEEehhhhhCcHHHHHHHHHHHHHhcCCCc
Confidence 34445699999999876432 2344555677777766675 999999988888776655432 3
Q ss_pred CCcceEEEE
Q 016103 233 FKISKAVFI 241 (395)
Q Consensus 233 ~~V~~lVli 241 (395)
..|.++++-
T Consensus 530 r~id~~~lt 538 (587)
T KOG0781|consen 530 RLIDGILLT 538 (587)
T ss_pred cccceEEEE
Confidence 346666553
No 335
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=25.13 E-value=38 Score=33.15 Aligned_cols=28 Identities=7% Similarity=0.038 Sum_probs=21.3
Q ss_pred cEEEEEeChhHHHHHHHHHHCCCCcceE
Q 016103 211 KVILVGHDFGGACISYAMELFPFKISKA 238 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p~~V~~l 238 (395)
+-+++|-|.|+.+|..++...++.+..+
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 4479999999999999998655544333
No 336
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=25.00 E-value=3.8e+02 Score=22.24 Aligned_cols=85 Identities=24% Similarity=0.211 Sum_probs=52.6
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeC-h
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHD-F 219 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS-~ 219 (395)
.+++++-|-.... ....+...|. +|+.++.+.. ..++.+.+++.+.++++..+. .++|+|+| .
T Consensus 30 ~v~~v~~G~~~~~-----~~~~~~~~Gad~v~~~~~~~~--------~~~~~~~~a~al~~~i~~~~p--~~Vl~~~t~~ 94 (168)
T cd01715 30 EVTALVIGSGAEA-----VAAALKAYGADKVLVAEDPAL--------AHYLAEPYAPALVALAKKEKP--SHILAGATSF 94 (168)
T ss_pred CEEEEEECCChHH-----HHHHHHhcCCCEEEEecChhh--------cccChHHHHHHHHHHHHhcCC--CEEEECCCcc
Confidence 4666666643211 2445555666 6777775421 235788999999999988773 67777765 4
Q ss_pred hHHHHHHHHHHCCC-CcceEEEE
Q 016103 220 GGACISYAMELFPF-KISKAVFI 241 (395)
Q Consensus 220 Gg~~a~~~a~~~p~-~V~~lVli 241 (395)
|.-++-.+|.+..- .+..++-+
T Consensus 95 g~~la~rlAa~L~~~~vtdv~~l 117 (168)
T cd01715 95 GKDLAPRVAAKLDVGLISDVTAL 117 (168)
T ss_pred ccchHHHHHHHhCCCceeeEEEE
Confidence 55677777776432 34444444
No 337
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=24.99 E-value=3.2e+02 Score=25.69 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=42.7
Q ss_pred HHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH-HHHHHHHHC
Q 016103 162 ALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA-CISYAMELF 231 (395)
Q Consensus 162 ~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~-~a~~~a~~~ 231 (395)
+.+..+|. .|+..|.+. .. ++.+.+++.+.++++..+.. .++|+|++.=|. ++-.+|.+.
T Consensus 42 ~~~~~~Gad~V~~~~~~~--------~~-~~~e~~~~al~~~i~~~~p~-~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP--------DD-RMIEDYAGVMADTIRQHGAD-GLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc--------cc-cChHHHHHHHHHHHHhhCCC-cEEEEcCCccHHHHHHHHHHHh
Confidence 45656665 688888752 12 67899999999999887642 589998887555 666777664
No 338
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=24.81 E-value=2.5e+02 Score=26.35 Aligned_cols=63 Identities=16% Similarity=0.075 Sum_probs=39.0
Q ss_pred CCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCC
Q 016103 141 TNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPD 208 (395)
Q Consensus 141 ~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~ 208 (395)
..+||.+-|.-+++-. +..|+++||.|..+-++.+..-+.. ......+....|+..+.++|++
T Consensus 6 ~~VvvamSgGVDSsVa----a~Ll~~~g~~v~gv~M~nWd~~de~-~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 6 DRVVVAMSGGVDSSVA----ARLLAARGYNVTGVFMKNWDSLDEF-GSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred ceEEEEecCCchHHHH----HHHHHhcCCCeeEEeeecccccccc-ccCCCchhhHHHHHHHHHHhCC
Confidence 3466767665443322 3467888999999888876322222 2234556666777777777766
No 339
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=24.79 E-value=5.3e+02 Score=25.33 Aligned_cols=39 Identities=21% Similarity=0.105 Sum_probs=28.5
Q ss_pred CCCeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCC
Q 016103 140 ETNHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGA 179 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~ 179 (395)
+..+-|++||.+.... ...+.+.+.+.|..|++-|+...
T Consensus 265 ~e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~ 303 (413)
T TIGR02260 265 EEKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKV 303 (413)
T ss_pred CcceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEecccc
Confidence 3577999999876654 34455666688999999987754
No 340
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=24.74 E-value=90 Score=34.87 Aligned_cols=24 Identities=38% Similarity=0.429 Sum_probs=20.0
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
.+.++|..+++. +-.|||||.|-+
T Consensus 571 aLtDlLs~lgi~-PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 571 ALTDLLSCLGIR-PDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHhcCCC-CCcccccccchh
Confidence 567788888996 999999999854
No 341
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=24.52 E-value=1.1e+02 Score=25.75 Aligned_cols=32 Identities=28% Similarity=0.176 Sum_probs=21.4
Q ss_pred EEEcCCCCChhh--HHHHHHHHHhCCCEEEEEcC
Q 016103 145 VLVHGGGFGAWC--WYKTIALLEEGGFKVTAIDL 176 (395)
Q Consensus 145 v~~HG~~~~~~~--~~~~~~~L~~~G~~v~~~d~ 176 (395)
.+.++-|+.... -..++..|+.+|++|+++|+
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 344444444433 35688899999999999998
No 342
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=24.47 E-value=5.4e+02 Score=24.09 Aligned_cols=98 Identities=18% Similarity=0.190 Sum_probs=60.7
Q ss_pred eEEEEcCCCCCh-hhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCC----------------------CCccChhhhHHHH
Q 016103 143 HFVLVHGGGFGA-WCWYKTIALLEEGGFKVTAIDLTGAGIHSFDT----------------------NGITSLSQYVKPL 199 (395)
Q Consensus 143 ~vv~~HG~~~~~-~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~----------------------~~~~~~~~~~~~l 199 (395)
..|++-|-+.+. +....+++.....|-.++.+|.--.+...... +....+..+++.+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 457777877665 46778888888889999999975432211100 0001123344444
Q ss_pred HHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcceEEE
Q 016103 200 TDFLEKLPDAEKVILVGHDFGGACISYAMELFPFKISKAVF 240 (395)
Q Consensus 200 ~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~~lVl 240 (395)
..++..-+.-.-++-+|-|.|..++.-.+.+.|--|-+++.
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 44444433213677888999999988888888865555544
No 343
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=24.44 E-value=3e+02 Score=25.21 Aligned_cols=76 Identities=14% Similarity=0.057 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCCCCChhhHHHHHHHHHhCCC-EEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 138 DLETNHFVLVHGGGFGAWCWYKTIALLEEGGF-KVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~~~~~~~~~L~~~G~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
+.+.|.|+|.--..--......+.+.+.+.|. -++.+|+| .+..+++....+..+++ .+.|+.
T Consensus 92 ~~~~Pivlm~Y~Npi~~~Gie~F~~~~~~~GvdGlivpDLP---------------~ee~~~~~~~~~~~gi~-~I~lva 155 (265)
T COG0159 92 GVKVPIVLMTYYNPIFNYGIEKFLRRAKEAGVDGLLVPDLP---------------PEESDELLKAAEKHGID-PIFLVA 155 (265)
T ss_pred CCCCCEEEEEeccHHHHhhHHHHHHHHHHcCCCEEEeCCCC---------------hHHHHHHHHHHHHcCCc-EEEEeC
Confidence 44557676665544444455667778888876 48999986 33455777778888986 888886
Q ss_pred eChhHHHHHHHHH
Q 016103 217 HDFGGACISYAME 229 (395)
Q Consensus 217 hS~Gg~~a~~~a~ 229 (395)
-+..--..-..+.
T Consensus 156 Ptt~~~rl~~i~~ 168 (265)
T COG0159 156 PTTPDERLKKIAE 168 (265)
T ss_pred CCCCHHHHHHHHH
Confidence 6655444444443
No 344
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=24.40 E-value=3.4e+02 Score=21.08 Aligned_cols=72 Identities=18% Similarity=0.194 Sum_probs=50.2
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
.||..||- -+......++.+....-.|.++++. ...+.+++.+.+.++++.++.++.++++--=+||.
T Consensus 4 ili~sHG~--~A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQ--AAIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHH--HHHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 68889995 4455566666665433457777763 22578899999999999986555788887777777
Q ss_pred HHHH
Q 016103 223 CISY 226 (395)
Q Consensus 223 ~a~~ 226 (395)
..-.
T Consensus 72 p~n~ 75 (116)
T TIGR00824 72 PYNA 75 (116)
T ss_pred HHHH
Confidence 5433
No 345
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=24.18 E-value=68 Score=29.08 Aligned_cols=17 Identities=29% Similarity=0.745 Sum_probs=13.3
Q ss_pred CcEEEEEeChhHHHHHH
Q 016103 210 EKVILVGHDFGGACISY 226 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~ 226 (395)
..|+++|||+|..=...
T Consensus 235 ~~I~i~GhSl~~~D~~Y 251 (270)
T PF14253_consen 235 DEIIIYGHSLGEVDYPY 251 (270)
T ss_pred CEEEEEeCCCchhhHHH
Confidence 49999999999864433
No 346
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=23.76 E-value=51 Score=33.70 Aligned_cols=34 Identities=24% Similarity=0.115 Sum_probs=26.1
Q ss_pred EEEEEeChhHHHHHHHHHHCCC-CcceEEEEcccc
Q 016103 212 VILVGHDFGGACISYAMELFPF-KISKAVFIAAAM 245 (395)
Q Consensus 212 v~lvGhS~Gg~~a~~~a~~~p~-~V~~lVli~~~~ 245 (395)
|+-.+.|-||..++..|++.-+ .|.+++...|..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v 321 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNV 321 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCcc
Confidence 4555889999999999987544 588888877653
No 347
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=23.63 E-value=1.8e+02 Score=25.94 Aligned_cols=48 Identities=17% Similarity=0.218 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEE
Q 016103 157 WYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILV 215 (395)
Q Consensus 157 ~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lv 215 (395)
.+.+++.|.++||.|..+.+.- ..+...+.+.|..+++..+++ .+.++
T Consensus 51 MRhfa~~L~~~G~~V~Y~~~~~----------~~~~~s~~~~L~~~~~~~~~~-~~~~~ 98 (224)
T PF04244_consen 51 MRHFADELRAKGFRVHYIELDD----------PENTQSFEDALARALKQHGID-RLHVM 98 (224)
T ss_dssp HHHHHHHHHHTT--EEEE-TT-----------TT--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHHhCCCEEEEEeCCC----------ccccccHHHHHHHHHHHcCCC-EEEEE
Confidence 4667889999999999999741 123346777888888888875 66655
No 348
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=23.58 E-value=3.5e+02 Score=23.24 Aligned_cols=45 Identities=13% Similarity=0.070 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHH-HHHHHHHCCCC
Q 016103 158 YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKP-LTDFLEKLPDA 209 (395)
Q Consensus 158 ~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-l~~~l~~l~~~ 209 (395)
......|.+.|+.|+-+.. |+- ....+++++++. +-.+++.++++
T Consensus 132 ~~Nl~~L~~~G~~vi~P~~-g~~------a~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 132 LRNMTKLAEMGAIIMPPVP-AFY------HRPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred HHHHHHHHHCcCEEECCCc-ccc------cCCCCHHHHHHHHHHHHHHhcCCC
Confidence 4556678888998887764 321 234688999885 45788999875
No 349
>PRK10824 glutaredoxin-4; Provisional
Probab=23.50 E-value=3.7e+02 Score=21.09 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=45.4
Q ss_pred CCCCeEEEEcCCCCChhh-H-HHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 139 LETNHFVLVHGGGFGAWC-W-YKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~-~-~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
.+.++|||+.|......| | ......|.+.|.....+|.-. + .+..+.+..+-.+--+. .|.|=|
T Consensus 13 ~~~~Vvvf~Kg~~~~p~Cpyc~~ak~lL~~~~i~~~~idi~~------------d-~~~~~~l~~~sg~~TVP-QIFI~G 78 (115)
T PRK10824 13 AENPILLYMKGSPKLPSCGFSAQAVQALSACGERFAYVDILQ------------N-PDIRAELPKYANWPTFP-QLWVDG 78 (115)
T ss_pred hcCCEEEEECCCCCCCCCchHHHHHHHHHHcCCCceEEEecC------------C-HHHHHHHHHHhCCCCCC-eEEECC
Confidence 356899999997655554 2 344556666664444445410 1 12222333333333444 788889
Q ss_pred eChhHHHHHHHHHHC
Q 016103 217 HDFGGACISYAMELF 231 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~ 231 (395)
...||+--+..+...
T Consensus 79 ~~IGG~ddl~~l~~~ 93 (115)
T PRK10824 79 ELVGGCDIVIEMYQR 93 (115)
T ss_pred EEEcChHHHHHHHHC
Confidence 999999777666543
No 350
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=23.46 E-value=5.3e+02 Score=24.82 Aligned_cols=67 Identities=24% Similarity=0.268 Sum_probs=44.6
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEe
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGH 217 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGh 217 (395)
.++++|--.-.......+...|...|+.+..+..|. | ...-++ +....+.+.+-..+.+++-.|||-
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~-G------E~~Ksl-~~~~~i~~~ll~~~~~R~s~iial 101 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPD-G------EEYKSL-ETLEKIYDALLEAGLDRKSTLIAL 101 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCC-C------cccccH-HHHHHHHHHHHHcCCCCCcEEEEE
Confidence 667777655555566778888999999987777763 1 222355 455566666666677667777764
No 351
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=23.27 E-value=1.7e+02 Score=23.13 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=23.9
Q ss_pred CCCCCeEEEEcCCC---C----------ChhhHHH-----------HHHHHHhCCCEEEEE
Q 016103 138 DLETNHFVLVHGGG---F----------GAWCWYK-----------TIALLEEGGFKVTAI 174 (395)
Q Consensus 138 ~~~~~~vv~~HG~~---~----------~~~~~~~-----------~~~~L~~~G~~v~~~ 174 (395)
-.....+|||||-. . +.+.|.. ....|.+.|+.|+.+
T Consensus 53 ~~~~klaIfVDGcfWHgh~c~~~~~pk~n~~fW~~Ki~~n~~rD~~~~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 53 FDEYRCVIFIHGCFWHGHHCYLGKVPKTRTDFWSPKIEKNVERDRRVNSRLQELGWRVLRV 113 (117)
T ss_pred ecCCCEEEEEcccccccCCcccccCCCccHHHHHHHHHHHHHHHHHHHHHHHHCcCEEEEE
Confidence 34567899998852 1 1234432 345688889999876
No 352
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=22.90 E-value=2e+02 Score=24.66 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=21.4
Q ss_pred EEEEcCCCCCCCCCCCCCcc--Ch----hhhHHHHHHHHHHCCC
Q 016103 171 VTAIDLTGAGIHSFDTNGIT--SL----SQYVKPLTDFLEKLPD 208 (395)
Q Consensus 171 v~~~d~~G~G~s~~~~~~~~--~~----~~~~~~l~~~l~~l~~ 208 (395)
+|++| ||||..+....... .- -+++..+...|+..|.
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~ 44 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGA 44 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCC
Confidence 67788 79998764332211 11 2334566667777664
No 353
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.82 E-value=1.3e+02 Score=26.80 Aligned_cols=35 Identities=11% Similarity=0.084 Sum_probs=25.1
Q ss_pred HHHHHHHHCCCCC-cEEEEEeChhHHHHHHHHHHCC
Q 016103 198 PLTDFLEKLPDAE-KVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 198 ~l~~~l~~l~~~~-~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
-+.+.|.+.++.. ...++|-|.|+.++..++...+
T Consensus 16 GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 16 GVLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 4555555556631 4489999999999999988643
No 354
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=22.78 E-value=5.9e+02 Score=25.11 Aligned_cols=79 Identities=14% Similarity=0.162 Sum_probs=50.0
Q ss_pred ChhhHHHHHHHHHh-CCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE-eChhHHHHHHHHHH
Q 016103 153 GAWCWYKTIALLEE-GGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG-HDFGGACISYAMEL 230 (395)
Q Consensus 153 ~~~~~~~~~~~L~~-~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG-hS~Gg~~a~~~a~~ 230 (395)
+...+...+..+.. .++.++.+|-+|... .-....+.+..+++..... .++|+- -++++.-+...+..
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~---------kd~~lm~EL~~~lk~~~Pd-evlLVLsATtk~~d~~~i~~~ 373 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNY---------RASETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITN 373 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccC---------cCHHHHHHHHHHHhhcCCC-eEEEEECCccChHHHHHHHHH
Confidence 45556566666654 469999999987632 1234556667777766554 566653 34677676777776
Q ss_pred CCC-CcceEEEE
Q 016103 231 FPF-KISKAVFI 241 (395)
Q Consensus 231 ~p~-~V~~lVli 241 (395)
+-. .+.++|+-
T Consensus 374 F~~~~idglI~T 385 (436)
T PRK11889 374 FKDIHIDGIVFT 385 (436)
T ss_pred hcCCCCCEEEEE
Confidence 543 57777773
No 355
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=22.67 E-value=5.1e+02 Score=24.91 Aligned_cols=33 Identities=15% Similarity=0.363 Sum_probs=24.0
Q ss_pred CcEEEEEeC-hhHHHHHHHHHHCCCCcceEEEEcccc
Q 016103 210 EKVILVGHD-FGGACISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 210 ~~v~lvGhS-~Gg~~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
.+|.|+|-. .|+.++..++.. -|..+++++...
T Consensus 136 ~~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d~ 169 (376)
T PRK08762 136 ARVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHDV 169 (376)
T ss_pred CcEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCCE
Confidence 489999886 566666666553 388899998754
No 356
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=22.64 E-value=1.1e+02 Score=28.79 Aligned_cols=20 Identities=20% Similarity=0.255 Sum_probs=17.8
Q ss_pred CcEEEEEeChhHHHHHHHHH
Q 016103 210 EKVILVGHDFGGACISYAME 229 (395)
Q Consensus 210 ~~v~lvGhS~Gg~~a~~~a~ 229 (395)
.+.++.|||+|=+.|+.++.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 48899999999999998876
No 357
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=22.47 E-value=81 Score=30.68 Aligned_cols=35 Identities=11% Similarity=-0.113 Sum_probs=24.3
Q ss_pred HHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCCCcc
Q 016103 201 DFLEKLPDAEKVILVGHDFGGACISYAMELFPFKIS 236 (395)
Q Consensus 201 ~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~~V~ 236 (395)
..|...++. +-+|.|-|.|+.+|..+|..-++.+.
T Consensus 103 kaL~e~gl~-p~~i~GtS~Gaivaa~~a~~~~~e~~ 137 (391)
T cd07229 103 KALWLRGLL-PRIITGTATGALIAALVGVHTDEELL 137 (391)
T ss_pred HHHHHcCCC-CceEEEecHHHHHHHHHHcCCHHHHH
Confidence 333344553 55799999999999999985444433
No 358
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.87 E-value=57 Score=30.66 Aligned_cols=22 Identities=9% Similarity=0.141 Sum_probs=17.6
Q ss_pred cEEEEEeChhHHHHHHHHHHCC
Q 016103 211 KVILVGHDFGGACISYAMELFP 232 (395)
Q Consensus 211 ~v~lvGhS~Gg~~a~~~a~~~p 232 (395)
+-++.|-|.|+.+|..++...+
T Consensus 97 p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 97 PRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred CCEEEEECHHHHHHHHHHcCCH
Confidence 4479999999999988887433
No 359
>PRK14462 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=21.74 E-value=7e+02 Score=23.93 Aligned_cols=79 Identities=14% Similarity=0.037 Sum_probs=51.1
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
-.+++.|+.++.+.-..+++.+...+..|=.+-+--++.+.... .+ .+.++.+..++...|+. +.+..|+|-=
T Consensus 267 eyvLI~GvNDs~e~a~~La~llk~l~~~VnLIPyn~~~~~~~~~---ps-~e~i~~f~~~l~~~gi~---vtvR~~~G~d 339 (356)
T PRK14462 267 EYLVIKDVNDDLKSAKKLVKLLNGIKAKVNLILFNPHEGSKFER---PS-LEDMIKFQDYLNSKGLL---CTIRESKGLD 339 (356)
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcCcEEEEEeCCCCCCCCCCC---CC-HHHHHHHHHHHHHCCCc---EEEeCCCCCc
Confidence 36899999999999999988887654444444433333332211 22 34455667777777765 7788888876
Q ss_pred HHHHHH
Q 016103 223 CISYAM 228 (395)
Q Consensus 223 ~a~~~a 228 (395)
+..++.
T Consensus 340 I~aACG 345 (356)
T PRK14462 340 ISAACG 345 (356)
T ss_pred hhhcCc
Confidence 655543
No 360
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=21.70 E-value=5.4e+02 Score=24.21 Aligned_cols=86 Identities=21% Similarity=0.123 Sum_probs=49.3
Q ss_pred HHHHHHHHhCCCEEEEEcCCCCCCCCCCCC--CccChhhhH--HHHHHHHHHCCCCCc-----EEEEEeCh---------
Q 016103 158 YKTIALLEEGGFKVTAIDLTGAGIHSFDTN--GITSLSQYV--KPLTDFLEKLPDAEK-----VILVGHDF--------- 219 (395)
Q Consensus 158 ~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~--~~~~~~~~~--~~l~~~l~~l~~~~~-----v~lvGhS~--------- 219 (395)
...+..|.+.||.|+++|-.-.|....-.. ..+-.-+.. +.+.+++++..++.- ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 345567777899999999876665432211 111112222 356677777666411 23456664
Q ss_pred --hHH-HHHHHHHHCCCCcceEEEEcccc
Q 016103 220 --GGA-CISYAMELFPFKISKAVFIAAAM 245 (395)
Q Consensus 220 --Gg~-~a~~~a~~~p~~V~~lVli~~~~ 245 (395)
+|. ..+.++.++ .|+.+|+.++..
T Consensus 94 Nv~gTl~Ll~am~~~--gv~~~vFSStAa 120 (329)
T COG1087 94 NVVGTLNLIEAMLQT--GVKKFIFSSTAA 120 (329)
T ss_pred chHhHHHHHHHHHHh--CCCEEEEecchh
Confidence 344 444555544 399999988764
No 361
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=21.49 E-value=1.3e+02 Score=28.27 Aligned_cols=19 Identities=16% Similarity=0.104 Sum_probs=16.3
Q ss_pred EEEEeChhHHHHHHHHHHC
Q 016103 213 ILVGHDFGGACISYAMELF 231 (395)
Q Consensus 213 ~lvGhS~Gg~~a~~~a~~~ 231 (395)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6779999999999998643
No 362
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=21.45 E-value=3.5e+02 Score=22.66 Aligned_cols=54 Identities=15% Similarity=0.162 Sum_probs=35.0
Q ss_pred CCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHHHH
Q 016103 151 GFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGACIS 225 (395)
Q Consensus 151 ~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~a~ 225 (395)
++.......+++.|.++|+.|..+. .....+...+.....+ +++.|+.......
T Consensus 13 ~G~~~~~~~l~~~L~~~g~~v~v~~------------------~~~~~~~~~~~~~~~D---~i~~~~~~~~~~~ 66 (229)
T cd01635 13 GGVELVLLDLAKALARRGHEVEVVA------------------LLLLLLLRILRGFKPD---VVHAHGYYPAPLA 66 (229)
T ss_pred CCchhHHHHHHHHHHHcCCeEEEEE------------------echHHHHHHHhhcCCC---EEEEcCCCcHHHH
Confidence 4555677889999999999999887 2223344445444443 6666666655544
No 363
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=21.37 E-value=1.4e+02 Score=27.05 Aligned_cols=36 Identities=8% Similarity=-0.104 Sum_probs=24.4
Q ss_pred HHHHHHHHCCCCCcEEEEEeChhHHHHHHHHHHCCC
Q 016103 198 PLTDFLEKLPDAEKVILVGHDFGGACISYAMELFPF 233 (395)
Q Consensus 198 ~l~~~l~~l~~~~~v~lvGhS~Gg~~a~~~a~~~p~ 233 (395)
-+.+.+.+.++...-.++|.|.|+.++..++.....
T Consensus 15 Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 15 GVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 344444444442133889999999999999887544
No 364
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=21.37 E-value=1.5e+02 Score=26.28 Aligned_cols=38 Identities=18% Similarity=0.358 Sum_probs=23.2
Q ss_pred CCCCCeEEEEcCCCCChh-----hHHHHHHHHHhCCCEEEEEc
Q 016103 138 DLETNHFVLVHGGGFGAW-----CWYKTIALLEEGGFKVTAID 175 (395)
Q Consensus 138 ~~~~~~vv~~HG~~~~~~-----~~~~~~~~L~~~G~~v~~~d 175 (395)
..+++.|++.+|.+.... .|..+++.|.++|+.|+.+=
T Consensus 102 ~~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 102 SKDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp -TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred hccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 346678888888766443 46778999999887777553
No 365
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=21.14 E-value=98 Score=24.39 Aligned_cols=22 Identities=32% Similarity=0.493 Sum_probs=19.6
Q ss_pred hHHHHHHHHHhCCCEEEEEcCC
Q 016103 156 CWYKTIALLEEGGFKVTAIDLT 177 (395)
Q Consensus 156 ~~~~~~~~L~~~G~~v~~~d~~ 177 (395)
.+..+++.|+++||.|++.|--
T Consensus 24 ~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 24 FFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred hHHHHHHHHHHcCCcEEEEecc
Confidence 5678999999999999999974
No 366
>PRK07206 hypothetical protein; Provisional
Probab=20.73 E-value=5e+02 Score=25.12 Aligned_cols=81 Identities=22% Similarity=0.225 Sum_probs=44.3
Q ss_pred CeEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCC----CCCCC---CccChhhhHHHHHHHHHHCCCCCcEEE
Q 016103 142 NHFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIH----SFDTN---GITSLSQYVKPLTDFLEKLPDAEKVIL 214 (395)
Q Consensus 142 ~~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s----~~~~~---~~~~~~~~~~~l~~~l~~l~~~~~v~l 214 (395)
+.|+++.|.... ..+++.+.+.||.++++|-.+.-.. ..... ..... ...+.+.+++...++ ..++
T Consensus 3 k~~liv~~~~~~----~~~~~a~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~l~~~~~~~~~--d~vi 75 (416)
T PRK07206 3 KKVVIVDPFSSG----KFLAPAFKKRGIEPIAVTSSCLLDPYYYASFDTSDFIEVIIN-GDIDDLVEFLRKLGP--EAII 75 (416)
T ss_pred CeEEEEcCCchH----HHHHHHHHHcCCeEEEEEcCCCCchhhhcccCcccchhhhcC-CCHHHHHHHHHHcCC--CEEE
Confidence 367888775332 3577788888999999985432110 00000 00111 235567777777775 3455
Q ss_pred EEeChhHHHHHHHHH
Q 016103 215 VGHDFGGACISYAME 229 (395)
Q Consensus 215 vGhS~Gg~~a~~~a~ 229 (395)
.|...+-.++..++.
T Consensus 76 ~~~e~~~~~~a~l~~ 90 (416)
T PRK07206 76 AGAESGVELADRLAE 90 (416)
T ss_pred ECCCccHHHHHHHHH
Confidence 565554444444443
No 367
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=20.68 E-value=6.4e+02 Score=22.84 Aligned_cols=36 Identities=17% Similarity=0.065 Sum_probs=25.1
Q ss_pred eEEEEcCC-----CCChhhHHHHHHHHHhCCCEEEEEcCCC
Q 016103 143 HFVLVHGG-----GFGAWCWYKTIALLEEGGFKVTAIDLTG 178 (395)
Q Consensus 143 ~vv~~HG~-----~~~~~~~~~~~~~L~~~G~~v~~~d~~G 178 (395)
.+++.|++ |+.......+++.|.++|+.|.++....
T Consensus 2 Il~i~~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 42 (359)
T cd03823 2 ILVVNHLYPPRSVGGAEVVAHDLAEALAKRGHEVAVLTAGE 42 (359)
T ss_pred eeEEcccCCcccccchHHHHHHHHHHHHhcCCceEEEeCCC
Confidence 34555555 3344556788999999999999887543
No 368
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=20.66 E-value=3.2e+02 Score=23.35 Aligned_cols=60 Identities=12% Similarity=0.292 Sum_probs=36.2
Q ss_pred CCCeEEEEcCCCCChhhH-----HHHHHHHHhCCCEEEEEcCCCC---CCCCCCCCCccChhhhHHHHHHHHH
Q 016103 140 ETNHFVLVHGGGFGAWCW-----YKTIALLEEGGFKVTAIDLTGA---GIHSFDTNGITSLSQYVKPLTDFLE 204 (395)
Q Consensus 140 ~~~~vv~~HG~~~~~~~~-----~~~~~~L~~~G~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~l~~~l~ 204 (395)
.+.+||+++- .+...| ..-...|.+.|+.|+-+. +|+ |.... ....+++++++.+..++.
T Consensus 112 ~~~pvvi~Pa--mn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~--g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPA--MNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGY--GALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEEC--CCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccC--CCCCCHHHHHHHHHHHhc
Confidence 3556666664 333443 556678888899888777 444 33221 233567777777766554
No 369
>PRK14455 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=20.59 E-value=6.1e+02 Score=24.31 Aligned_cols=78 Identities=14% Similarity=0.054 Sum_probs=49.7
Q ss_pred EEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHHH
Q 016103 144 FVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGAC 223 (395)
Q Consensus 144 vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~~ 223 (395)
.+++.|...+.+....+++.+...+..|-.+-+--.|.+.... .+ .+....+.+++...|+. +.+..|.|.=+
T Consensus 267 y~lI~gvNDs~ed~~~La~ll~~l~~~VnLIPynp~~~~ky~~---ps-~e~l~~f~~~L~~~gi~---v~ir~~~g~di 339 (356)
T PRK14455 267 YILLGGVNDQVEHAEELADLLKGIKCHVNLIPVNPVPERDYVR---TP-KEDIFAFEDTLKKNGVN---CTIRREHGTDI 339 (356)
T ss_pred EEEeCCCCCCHHHHHHHHHHHhcCCCcEEEEecCcCCCCCCcC---CC-HHHHHHHHHHHHHCCCc---EEEeCCCCcch
Confidence 4889999999999999998887765555544443334332211 22 23444556677777775 66788888766
Q ss_pred HHHHH
Q 016103 224 ISYAM 228 (395)
Q Consensus 224 a~~~a 228 (395)
..++.
T Consensus 340 ~aaCG 344 (356)
T PRK14455 340 DAACG 344 (356)
T ss_pred hhcCc
Confidence 55443
No 370
>TIGR00048 radical SAM enzyme, Cfr family. A Staphylococcus sciuri plasmid-borne member of this family, Cfr, has been identified as essential to transferrable resistance to chloramphenicol and florfenicol by an unknown mechanism. A 14-15 residue cluster with four perfectly conserved Cys residues suggests this protein may be an enzyme with an iron-sulfur cluster. The Cys cluster is part of the radical SAM domain, suggested to provide a general mechanism by which the Fe-S center cleaves S-adenosylmethionine to initiate radical-based catalysis. Members of this family lack apparent transmembrane domains.
Probab=20.58 E-value=6.2e+02 Score=24.26 Aligned_cols=80 Identities=13% Similarity=0.062 Sum_probs=50.3
Q ss_pred eEEEEcCCCCChhhHHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEEeChhHH
Q 016103 143 HFVLVHGGGFGAWCWYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVGHDFGGA 222 (395)
Q Consensus 143 ~vv~~HG~~~~~~~~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvGhS~Gg~ 222 (395)
-.+++.|+..+.+....+++.+...+..|=.+.+--++.+.... ...+.++.+.+++...++. +.+..|.|.=
T Consensus 262 eyvLI~GvNDs~e~a~~La~llk~l~~~VnLIPynp~~~~~~~~----ps~e~i~~f~~~L~~~gi~---v~iR~~~G~d 334 (355)
T TIGR00048 262 EYVLLDGVNDQVEHAEELAELLKGTKCKVNLIPWNPFPEADYER----PSNEQIDRFAKTLMSYGFT---VTIRKSRGDD 334 (355)
T ss_pred EEEEECCCCCCHHHHHHHHHHHhcCCCceEEEecccCCCCCCCC----CCHHHHHHHHHHHHHCCCe---EEEeCCCCcc
Confidence 47899999999999999998887654444434333233222211 1234455566666666764 6778898877
Q ss_pred HHHHHHH
Q 016103 223 CISYAME 229 (395)
Q Consensus 223 ~a~~~a~ 229 (395)
+..++..
T Consensus 335 i~aaCGq 341 (355)
T TIGR00048 335 IDAACGQ 341 (355)
T ss_pred hhhcCCc
Confidence 6655443
No 371
>PF10489 RFPL3_antisense: Ret finger protein-like 3 antisense; InterPro: IPR019524 This short transcript is purported to be the antisense protein of exon 2 of the ret-finger protein-like 3 (RFPL3) gene, however this was not confirmed. Since RFPL3 is expressed in testis, the suggestion is that it may have a role in the antisense regulation of the RFPL genes. RFPL transcripts encode proteins with tripartite structure of RING finger, coiled-coil, and B30-2 domains, which are characteristic of the RING-B30 family. Each of these domains is thought to mediate protein-protein interactions by promoting homo- or heterodimerisation [].
Probab=20.46 E-value=48 Score=25.16 Aligned_cols=10 Identities=30% Similarity=0.614 Sum_probs=9.0
Q ss_pred CCCceeeecC
Q 016103 1 MGNFCTCLVP 10 (395)
Q Consensus 1 ~~~~~~~~~~ 10 (395)
|||.+.|+-.
T Consensus 1 mG~~~g~iKg 10 (124)
T PF10489_consen 1 MGSPAGCIKG 10 (124)
T ss_pred CCCccccccc
Confidence 8999999975
No 372
>TIGR00365 monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation.
Probab=20.33 E-value=3.8e+02 Score=20.03 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=44.9
Q ss_pred CCCCeEEEEcCCCCChhh--HHHHHHHHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCCCCCcEEEEE
Q 016103 139 LETNHFVLVHGGGFGAWC--WYKTIALLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLPDAEKVILVG 216 (395)
Q Consensus 139 ~~~~~vv~~HG~~~~~~~--~~~~~~~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~~~~~v~lvG 216 (395)
.+.++|||..|.....+| -....+.|.+.|.....+|.- . + .+..+.+..+-..-.+. .+.+=|
T Consensus 10 ~~~~Vvvf~kg~~~~~~Cp~C~~ak~lL~~~~i~~~~~di~----------~--~-~~~~~~l~~~tg~~tvP-~vfi~g 75 (97)
T TIGR00365 10 KENPVVLYMKGTPQFPQCGFSARAVQILKACGVPFAYVNVL----------E--D-PEIRQGIKEYSNWPTIP-QLYVKG 75 (97)
T ss_pred ccCCEEEEEccCCCCCCCchHHHHHHHHHHcCCCEEEEECC----------C--C-HHHHHHHHHHhCCCCCC-EEEECC
Confidence 356899999987433332 244566777878777777762 0 1 12222333332222332 455557
Q ss_pred eChhHHHHHHHHHHC
Q 016103 217 HDFGGACISYAMELF 231 (395)
Q Consensus 217 hS~Gg~~a~~~a~~~ 231 (395)
...||+--+..+.+.
T Consensus 76 ~~iGG~ddl~~l~~~ 90 (97)
T TIGR00365 76 EFVGGCDIIMEMYQS 90 (97)
T ss_pred EEEeChHHHHHHHHC
Confidence 888999777766543
No 373
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=20.29 E-value=6.7e+02 Score=22.91 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=37.4
Q ss_pred HHHhCCCEEEEEcCCCCCCCCCCCCCccChhhhHHHHHHHHHHCC------CCCcEEEEEeChhHHHHHHHHHHCCC--C
Q 016103 163 LLEEGGFKVTAIDLTGAGIHSFDTNGITSLSQYVKPLTDFLEKLP------DAEKVILVGHDFGGACISYAMELFPF--K 234 (395)
Q Consensus 163 ~L~~~G~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~l~~~l~~l~------~~~~v~lvGhS~Gg~~a~~~a~~~p~--~ 234 (395)
.+..++|.++.+|-+|.... -....+.+..+.+... .+ .+++|--+.-|.-++..+..+-+ .
T Consensus 149 ~~~~~~~D~ViIDT~G~~~~---------d~~~~~el~~~~~~~~~~~~~~~~-~~~LVl~a~~~~~~~~~~~~f~~~~~ 218 (272)
T TIGR00064 149 KAKARNIDVVLIDTAGRLQN---------KVNLMDELKKIKRVIKKVDKDAPD-EVLLVLDATTGQNALEQAKVFNEAVG 218 (272)
T ss_pred HHHHCCCCEEEEeCCCCCcc---------hHHHHHHHHHHHHHHhcccCCCCc-eEEEEEECCCCHHHHHHHHHHHhhCC
Confidence 34456799999999987542 2333444444444332 43 55566544445544444443322 3
Q ss_pred cceEEEE
Q 016103 235 ISKAVFI 241 (395)
Q Consensus 235 V~~lVli 241 (395)
+.++|+-
T Consensus 219 ~~g~IlT 225 (272)
T TIGR00064 219 LTGIILT 225 (272)
T ss_pred CCEEEEE
Confidence 5666664
No 374
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=20.04 E-value=1.2e+02 Score=21.97 Aligned_cols=24 Identities=25% Similarity=0.318 Sum_probs=18.0
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHHC
Q 016103 207 PDAEKVILVGHDFGGACISYAMELF 231 (395)
Q Consensus 207 ~~~~~v~lvGhS~Gg~~a~~~a~~~ 231 (395)
+. ++|.++|-|.|=.+|...+..+
T Consensus 38 Gp-K~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GP-KKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S--SEEEEES-SSHHHHHHHHHHHH
T ss_pred CC-ceEEEEecCCcccHHHHHHHHh
Confidence 44 4899999999988987777765
Done!