BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016104
(395 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359486529|ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 440
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/380 (65%), Positives = 292/380 (76%), Gaps = 8/380 (2%)
Query: 1 MEPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNN 60
MEPM D N+ GK +G+ +VE L +DDI KV +LEQ++N+VEQFYLT
Sbjct: 52 MEPMDASISDTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKK 111
Query: 61 QPNTSKSISIAKEKLKD--RHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQH 118
Q N SK SI K+K KD RHVAS++KQQQDA RE AA +RMQEL RQF I RQITQH
Sbjct: 112 QLNVSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAKRMQELMRQFGTILRQITQH 171
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
KWAWPFM PVDVEGLGLHDYYEVIEKPMDFSTIKNKM+ KDG GY+NVREI ADVRLVFK
Sbjct: 172 KWAWPFMQPVDVEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFK 231
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQ 238
NAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EE+KR+EEEEA+AQLDM L QEA
Sbjct: 232 NAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAH 291
Query: 239 TNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVA 298
A+++ +EL E+DM L+++RE ++QKCRK STEEK+ LG AL+RLS EDL KALEIVA
Sbjct: 292 AKMARDISNELFEIDMHLDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVA 351
Query: 299 ENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNE 358
++NPSF ATA+EV LD+DAQ E TLWRLK FV+++L+ +SS MGGNN
Sbjct: 352 QSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGKSSASMGGNNTATT------ 405
Query: 359 KDNSNKKNKNNPKRKKEICD 378
+N++ NN KRKKEICD
Sbjct: 406 TNNNHPTTNNNSKRKKEICD 425
>gi|356565711|ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
Length = 738
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 237/357 (66%), Positives = 284/357 (79%), Gaps = 18/357 (5%)
Query: 25 EVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIE 84
E+EG + +D+I+ KV +LEQK++D+E FY + + NQ +T K S AK+K K++HV SI+
Sbjct: 390 EIEGFKQRVDEIISKVDKLEQKVHDIENFYSSMNKNQTSTPKGNSAAKDKDKEKHVPSIK 449
Query: 85 KQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 144
KQQQDA RE AA +RMQ+L RQF I RQITQHKWAWPFM PVD+EGLGLHDYYEVI+K
Sbjct: 450 KQQQDASRREAAASKRMQDLMRQFGTILRQITQHKWAWPFMQPVDIEGLGLHDYYEVIDK 509
Query: 145 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
PMDFSTIKN+M+ KDGTGY++VREI ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEK
Sbjct: 510 PMDFSTIKNQMEAKDGTGYKHVREICADVRLVFKNAMKYNDERSDVHVMAKTLLSKFEEK 569
Query: 205 WLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 264
WLQLLPKV EEE R+EEEEA+AQL +Q+ QEA Q A++L +EL EVD+ LE LRE V+
Sbjct: 570 WLQLLPKVTEEETRREEEEAEAQLALQVAQEAAQAKMARDLSNELYEVDVILEELREMVV 629
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
++ RKMSTEEK+ LG ALTRLSPEDL KALEIVA+NNPSF ATA+EVDLDMDAQSE TLW
Sbjct: 630 KRFRKMSTEEKRKLGDALTRLSPEDLSKALEIVAQNNPSFQATAEEVDLDMDAQSESTLW 689
Query: 325 RLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 381
RLK FV+E+L+ ++SG MGGN N NN KRK+E+CDA+A
Sbjct: 690 RLKFFVKEALEVQGKNSGSMGGNENQNN------------------KRKRELCDAIA 728
>gi|297742702|emb|CBI35336.3| unnamed protein product [Vitis vinifera]
Length = 421
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/391 (64%), Positives = 300/391 (76%), Gaps = 14/391 (3%)
Query: 2 EPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQ 61
EPM ++ NV +GK +G+T +VEG +DDI KV +LEQ++N+VE FYLT Q
Sbjct: 43 EPMDASITNVRNVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQ 102
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA 121
N K S+ K+K +RHVAS +KQQQDA RE AA +RMQEL RQF I RQI QHKWA
Sbjct: 103 LNGYKGSSVLKDK--ERHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKWA 160
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
PF+HPVDVEGLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVRLVFKNAM
Sbjct: 161 GPFLHPVDVEGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAM 220
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNK 241
KYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+EEEEA+AQLDMQL QEA
Sbjct: 221 KYNDERHDVHVMAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKM 280
Query: 242 AKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENN 301
A+E+ +EL ++DM LE +RE VI+KCRKMSTEEK+ LG AL+RLS EDL KALEIVA+NN
Sbjct: 281 AREISNELYDIDMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNN 340
Query: 302 PSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDN 361
PSF ATA+EVDLD+DAQ+E TLWRLK FV+++L+ +SS G + N
Sbjct: 341 PSFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKSSASKG------------DNTN 388
Query: 362 SNKKNKNNPKRKKEICDALAKPAVKRTKKLP 392
+ NN KRKKEICDA+AK A K++KKLP
Sbjct: 389 TTTTATNNNKRKKEICDAIAKTAKKKSKKLP 419
>gi|147779795|emb|CAN62295.1| hypothetical protein VITISV_019973 [Vitis vinifera]
Length = 377
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/380 (65%), Positives = 294/380 (77%), Gaps = 14/380 (3%)
Query: 13 NVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAK 72
NV +GK +G+T +VEG +DDI KV +LEQ++N+VE FYLT Q N K S+ K
Sbjct: 10 NVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQLNGYKGSSVLK 69
Query: 73 EKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
+K +RHVAS +KQQQDA RE AA +RMQEL RQF I RQI QHKWA PF+HPVDVEG
Sbjct: 70 DK--ERHVASAKKQQQDASRREAAAAKRMQELMRQFGTILRQIMQHKWAGPFLHPVDVEG 127
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
LGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVRLVFKNAMKYNDER DVHV
Sbjct: 128 LGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHV 187
Query: 193 MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV 252
MAK+LL KFEEKWLQLLPKV EEEKR+EEEEA+AQLDMQL QEA A+E+ +EL +
Sbjct: 188 MAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAREISNELYXI 247
Query: 253 DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 312
DM LE +RE VI+KCRKMSTEEK+ LG AL+RLS EDL KALEIVA+NNPSF ATA+EVD
Sbjct: 248 DMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVD 307
Query: 313 LDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKR 372
LD+DAQ+E TLWRLK FV+++L+ +SS G + N+ NN KR
Sbjct: 308 LDIDAQTESTLWRLKFFVKDALEVQGKSSASKG------------DNTNTTTTATNNNKR 355
Query: 373 KKEICDALAKPAVKRTKKLP 392
KKEICDA+AK A K++KKLP
Sbjct: 356 KKEICDAIAKTAKKKSKKLP 375
>gi|359484096|ref|XP_003633062.1| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
Length = 377
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/380 (65%), Positives = 295/380 (77%), Gaps = 14/380 (3%)
Query: 13 NVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAK 72
NV +GK +G+T +VEG +DDI KV +LEQ++N+VE FYLT Q N K S+ K
Sbjct: 10 NVEIGKHKGNTDQVEGFKSCVDDIFTKVDKLEQRVNEVELFYLTASKRQLNGYKGSSVLK 69
Query: 73 EKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
+K +RHVAS +KQQQDA RE AA +RMQEL RQF I RQI QHKWA PF+HPVDVEG
Sbjct: 70 DK--ERHVASAKKQQQDASRREAAAVKRMQELMRQFGTILRQIMQHKWAGPFLHPVDVEG 127
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
LGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVRLVFKNAMKYNDER DVHV
Sbjct: 128 LGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKNVREICADVRLVFKNAMKYNDERHDVHV 187
Query: 193 MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV 252
MAK+LL KFEEKWLQLLPKV EEEKR+EEEEA+AQLDMQL QEA A+E+ +EL ++
Sbjct: 188 MAKTLLGKFEEKWLQLLPKVAEEEKRREEEEAEAQLDMQLAQEAAHAKMAREISNELYDI 247
Query: 253 DMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 312
DM LE +RE VI+KCRKMSTEEK+ LG AL+RLS EDL KALEIVA+NNPSF ATA+EVD
Sbjct: 248 DMHLEEVREMVIRKCRKMSTEEKRKLGAALSRLSAEDLSKALEIVAQNNPSFQATAEEVD 307
Query: 313 LDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKR 372
LD+DAQ+E TLWRLK FV+++L+ +SS G + N+ NN KR
Sbjct: 308 LDIDAQTESTLWRLKFFVKDALEVQGKSSASKG------------DNTNTTTTATNNNKR 355
Query: 373 KKEICDALAKPAVKRTKKLP 392
KKEICDA+AK A K++KKLP
Sbjct: 356 KKEICDAIAKTAKKKSKKLP 375
>gi|449452116|ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
gi|449485919|ref|XP_004157310.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
Length = 378
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/364 (67%), Positives = 292/364 (80%), Gaps = 10/364 (2%)
Query: 21 GDTV--EVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDR 78
GDTV EV+G +D+I KV +LEQ +N++EQFYLT QPN +K SI K+K K+R
Sbjct: 12 GDTVHTEVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGNKGSSIVKDKDKER 71
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
HV SI+KQQQ+A RE AA +RMQEL RQF I RQI+QHKWAWPFM PVDVEGLGLHDY
Sbjct: 72 HVPSIKKQQQEAARREAAATKRMQELMRQFGTILRQISQHKWAWPFMQPVDVEGLGLHDY 131
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
YEVI+KPMDFSTIKN+M+ KDGTGY+NVREI +DVRLVFKNAMKYNDER DVHVMAK+LL
Sbjct: 132 YEVIDKPMDFSTIKNQMEAKDGTGYKNVREICSDVRLVFKNAMKYNDERSDVHVMAKTLL 191
Query: 199 EKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN 258
KFEEKWLQLLPKV EEEKR+E+EEA+A LDMQL QEA Q A+++ +E+ EVDMQLE
Sbjct: 192 AKFEEKWLQLLPKVTEEEKRREDEEAEALLDMQLAQEAAQAKMARDISNEIYEVDMQLEE 251
Query: 259 LRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 318
LRE V+Q CRK+STEEK+ LG ALT+LSPED+ KALEIVAENNPSF ATA+EVDLD+DAQ
Sbjct: 252 LRELVVQNCRKISTEEKRKLGAALTKLSPEDISKALEIVAENNPSFQATAEEVDLDIDAQ 311
Query: 319 SELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICD 378
SE TLWRLK FV+++L+ ++SS GG NN N+ ++ +N KRKKEICD
Sbjct: 312 SESTLWRLKFFVKDALEVHAKSSASTGGGNNQNH--------TNSNNINSNNKRKKEICD 363
Query: 379 ALAK 382
A+A+
Sbjct: 364 AIAR 367
>gi|255577689|ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223530823|gb|EEF32687.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 391
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 243/398 (61%), Positives = 295/398 (74%), Gaps = 18/398 (4%)
Query: 1 MEPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNN 60
ME ++ D G+ G ++VE++G +D++ KV +LEQ++N+VE FYL +
Sbjct: 1 MEAITSSIPDFGSYDFG----NSVEIDGYKHRVDELFHKVDKLEQRVNEVELFYLNVNKK 56
Query: 61 QPNTSKSISIAKEKL-------KDRH-VASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
Q S +K K+RH V SI KQQQDA RE AA +RMQEL RQF I
Sbjct: 57 QQQQSGGGGNSKGSSIVKDNNNKERHSVPSIRKQQQDASKREAAASKRMQELMRQFGTIL 116
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
RQITQHKWAWPFM PVDV+GLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI AD
Sbjct: 117 RQITQHKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMETKDGTGYKNVREICAD 176
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL 232
VRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EEEKR+E EEA+AQLDMQL
Sbjct: 177 VRLVFKNAMKYNDERSDVHVMAKTLLAKFEEKWLQLLPKVTEEEKRREMEEAEAQLDMQL 236
Query: 233 TQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCK 292
QEAV A+EL +EL E+D L+ LR+ V+QKCRK+STEEK+ LG ALTRLSPEDL K
Sbjct: 237 AQEAVHAKMARELSNELYEIDTHLDELRDMVVQKCRKISTEEKRKLGAALTRLSPEDLTK 296
Query: 293 ALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNN 352
ALEIVA+NNP F ATA+EVDLD+DAQ+E TLWRLK FV+++L+ +++ +
Sbjct: 297 ALEIVAQNNPGFQATAEEVDLDIDAQTESTLWRLKFFVKDALEVQGKNA------ASAGG 350
Query: 353 DDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
++NNN + + N +N KRKKEICDA+AK A KR KK
Sbjct: 351 NNNNNNSNTTTNNNNSNNKRKKEICDAIAKTAKKRNKK 388
>gi|224098028|ref|XP_002311109.1| global transcription factor group [Populus trichocarpa]
gi|222850929|gb|EEE88476.1| global transcription factor group [Populus trichocarpa]
Length = 370
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 241/393 (61%), Positives = 288/393 (73%), Gaps = 29/393 (7%)
Query: 1 MEPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFY---LTK 57
ME +S D GN+ + ++ E EG ++D+ILQKV +LEQ++N+VEQFY +K
Sbjct: 1 MEAISPSIVDSGNLPIRNSDA---EAEGFKHSVDEILQKVDKLEQRVNEVEQFYSKNTSK 57
Query: 58 DNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQ 117
++ S K+K K+RH+ + A +RMQEL RQF I RQITQ
Sbjct: 58 KQQSGSSKGGSSTVKDKDKERHIPT--------------AAKRMQELMRQFGTILRQITQ 103
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
HKWAWPFM PVDV+GLGLHDYYEVI+KPMDFSTIKN+M+ KDGTGY++VREI ADVRLVF
Sbjct: 104 HKWAWPFMQPVDVKGLGLHDYYEVIDKPMDFSTIKNQMEAKDGTGYKSVREICADVRLVF 163
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 237
KNAMKYNDER DVHVMAK+LL KFEEKWLQ LPKV EEEKR+EEEEA+AQLDMQL QEA
Sbjct: 164 KNAMKYNDERSDVHVMAKTLLGKFEEKWLQFLPKVTEEEKRREEEEAEAQLDMQLAQEAA 223
Query: 238 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 297
A++L +EL EVDM LE LRE V+QKCRKMSTEEK+ LG ALTRLSPEDL KALEIV
Sbjct: 224 HAKMARDLGNELYEVDMHLEELREMVVQKCRKMSTEEKRKLGAALTRLSPEDLTKALEIV 283
Query: 298 AENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNN 357
A+NNP F ATA+EVDLD+DAQSE TLWRLK FV+++L+ +S+ GG NN
Sbjct: 284 AQNNPGFQATAEEVDLDIDAQSETTLWRLKFFVKDALEVQGKSAASAGGRNNTT------ 337
Query: 358 EKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
+ N NN KRK+EICDA+AK A KR+KK
Sbjct: 338 ---TPSNNNNNNNKRKREICDAIAKTAKKRSKK 367
>gi|296086052|emb|CBI31493.3| unnamed protein product [Vitis vinifera]
Length = 362
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 230/369 (62%), Positives = 270/369 (73%), Gaps = 28/369 (7%)
Query: 10 DLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSIS 69
D N+ GK +G+ +VE L +DDI KV +LEQ++N+VEQFYLT Q N SK
Sbjct: 7 DTRNMETGKNQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKKQLNVSK--- 63
Query: 70 IAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVD 129
DA RE AA +RMQEL RQF I RQITQHKWAWPFM PVD
Sbjct: 64 -------------------DASRREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVD 104
Query: 130 VEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDD 189
VEGLGLHDYYEVIEKPMDFSTIKNKM+ KDG GY+NVREI ADVRLVFKNAMKYNDER D
Sbjct: 105 VEGLGLHDYYEVIEKPMDFSTIKNKMEAKDGAGYKNVREICADVRLVFKNAMKYNDERRD 164
Query: 190 VHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSEL 249
VHVMAK+LL KFEEKWLQLLPKV EE+KR+EEEEA+AQLDM L QEA A+++ +EL
Sbjct: 165 VHVMAKTLLGKFEEKWLQLLPKVAEEDKRREEEEAEAQLDMHLAQEAAHAKMARDISNEL 224
Query: 250 NEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ 309
E+DM L+++RE ++QKCRK STEEK+ LG AL+RLS EDL KALEIVA++NPSF ATA+
Sbjct: 225 FEIDMHLDDIREIIVQKCRKTSTEEKRKLGAALSRLSAEDLSKALEIVAQSNPSFQATAE 284
Query: 310 EVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNN 369
EV LD+DAQ E TLWRLK FV+++L+ +SS MGGNN +N++ NN
Sbjct: 285 EVHLDIDAQRESTLWRLKFFVKDALEIQGKSSASMGGNNTATT------TNNNHPTTNNN 338
Query: 370 PKRKKEICD 378
KRKKEICD
Sbjct: 339 SKRKKEICD 347
>gi|224109720|ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
gi|222864329|gb|EEF01460.1| global transcription factor group [Populus trichocarpa]
Length = 318
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/317 (69%), Positives = 254/317 (80%), Gaps = 3/317 (0%)
Query: 21 GDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYL---TKDNNQPNTSKSISIAKEKLKD 77
G+ + EG ++D+I QKV +LEQ++N VEQFYL K + + SI K+K K+
Sbjct: 1 GNDADTEGFKHSVDEIFQKVDKLEQRMNGVEQFYLDISKKQQSGSSKGGGSSIVKDKDKE 60
Query: 78 RHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHD 137
RHV SI KQQQDA RE AA +RMQEL RQF I RQITQHKWAWPFM PVDV+GL LHD
Sbjct: 61 RHVTSIRKQQQDASKREAAAAKRMQELMRQFGTILRQITQHKWAWPFMQPVDVKGLRLHD 120
Query: 138 YYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSL 197
YYEVI+KPMDFSTIKN+M+ KDGTGY+NVREI ADVRLVFKNAMKYNDER DVHVMAK+L
Sbjct: 121 YYEVIDKPMDFSTIKNQMEAKDGTGYKNVREISADVRLVFKNAMKYNDERSDVHVMAKTL 180
Query: 198 LEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLE 257
L KFEEKWLQLLPKV EEEKR+E+EE +A+LDMQL QEA A++L +EL EVDM LE
Sbjct: 181 LGKFEEKWLQLLPKVTEEEKRREDEEVEAKLDMQLAQEAAHAKMARDLSNELYEVDMHLE 240
Query: 258 NLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDA 317
LR+ V+QKCRKMSTEEK+ LG ALTRLSPEDL KALEIVA +NP F ATA+EVDLD+DA
Sbjct: 241 ELRDIVVQKCRKMSTEEKRKLGVALTRLSPEDLTKALEIVARSNPGFQATAEEVDLDIDA 300
Query: 318 QSELTLWRLKVFVQESL 334
Q+E TLWRLK V++ L
Sbjct: 301 QTESTLWRLKFLVKDVL 317
>gi|356526669|ref|XP_003531939.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 367
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/352 (60%), Positives = 274/352 (77%), Gaps = 3/352 (0%)
Query: 26 VEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEK 85
+E +++ IL V +LE+++ +VEQFY + DN Q N SK S+AKEK +++H+ +K
Sbjct: 12 LEPFRVSVNQILTTVNKLEKQVTEVEQFYESTDNVQGNNSKGGSLAKEKGREKHITGTKK 71
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKP 145
QDA H E ++ +RMQEL RQF+ I RQITQHKWAWPFM PVDVEGLGLHDYYE+I+KP
Sbjct: 72 PLQDASHTEASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKP 131
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDF TIK+KM+ KDGTGY NVREIYADVRL+FKNAMKYN+E++DVHVMAK+LLEKFEEKW
Sbjct: 132 MDFGTIKSKMEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKW 191
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
LQLLPKV EEEKRQ EEEA+AQLD+QL E NKAK++ +EL E+DM L++L+E VIQ
Sbjct: 192 LQLLPKVAEEEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQ 251
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQE-VDLDMDAQSELTLW 324
+CRK+ST+EKK L +AL +LS E+L +AL+I+AE NP F ++ E V LD+DAQS+ TLW
Sbjct: 252 QCRKLSTQEKKMLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLW 311
Query: 325 RLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEK--DNSNKKNKNNPKRKK 374
RLK FV++SL+ + + G N N+N DD N+K D+ + K NPKRKK
Sbjct: 312 RLKAFVKDSLEEQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKRKK 363
>gi|255641563|gb|ACU21055.1| unknown [Glycine max]
Length = 363
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/352 (60%), Positives = 274/352 (77%), Gaps = 3/352 (0%)
Query: 26 VEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEK 85
+E +++ IL V +LE+++ +VEQFY + DN Q N SK S+AKEK +++H+ +K
Sbjct: 12 LEPFRVSVNQILTTVNKLEKQVTEVEQFYESTDNVQGNNSKGGSLAKEKGREKHITGTKK 71
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKP 145
QDA H E ++ +RMQEL RQF+ I RQITQHKWAWPFM PVDVEGLGLHDYYE+I+KP
Sbjct: 72 PLQDASHTEASSAKRMQELMRQFSTILRQITQHKWAWPFMDPVDVEGLGLHDYYEIIDKP 131
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDF TIK+KM+ KDGTGY NVREIYADVRL+FKNAMKYN+E++DVHVMAK+LLEKFEEKW
Sbjct: 132 MDFGTIKSKMEAKDGTGYNNVREIYADVRLIFKNAMKYNNEKNDVHVMAKTLLEKFEEKW 191
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
LQLLPKV EEEKRQ EEEA+AQLD+QL E NKAK++ +EL E+DM L++L+E VIQ
Sbjct: 192 LQLLPKVAEEEKRQLEEEAQAQLDIQLALETTYANKAKDISTELCEIDMHLKSLKEMVIQ 251
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQE-VDLDMDAQSELTLW 324
+CRK+ST+EKK L +AL +LS E+L +AL+I+AE NP F ++ E V LD+DAQS+ TLW
Sbjct: 252 QCRKLSTQEKKMLMSALGKLSLENLYRALDIIAETNPMFQPSSTEDVVLDLDAQSDYTLW 311
Query: 325 RLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEK--DNSNKKNKNNPKRKK 374
RLK FV++SL+ + + G N N+N DD N+K D+ + K NPK+KK
Sbjct: 312 RLKAFVKDSLEEQVKVNAGAGINPNDNPDDKKNKKRRDSGDSSGKTNPKKKK 363
>gi|30686240|ref|NP_181036.2| Transcription factor GTE6 [Arabidopsis thaliana]
gi|75148956|sp|Q84XV2.1|GTE1_ARATH RecName: Full=Transcription factor GTE1; AltName:
Full=Bromodomain-containing protein GTE1; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E1;
AltName: Full=Protein IMBIBITION-INDUCIBLE 1
gi|27803868|gb|AAO22056.1| IMB1 [Arabidopsis thaliana]
gi|110741364|dbj|BAF02232.1| RING3 protein-like [Arabidopsis thaliana]
gi|111074406|gb|ABH04576.1| At2g34900 [Arabidopsis thaliana]
gi|330253943|gb|AEC09037.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/408 (53%), Positives = 279/408 (68%), Gaps = 49/408 (12%)
Query: 2 EPMSGLNQDLGNVGLGKAEGDT-VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDN- 59
EP+ N D+ N L G+ E+E +D+I +V QLEQK+ +VE FY TKD
Sbjct: 8 EPVLVPNCDVENTELAVFNGNGESELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGA 67
Query: 60 -----------------NQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQ 102
+QPN SK S KEK K +HV+S
Sbjct: 68 AQTNTSKSNSGGKKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------P 108
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+L RQFA +FRQI QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 109 DLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE--- 165
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +E
Sbjct: 166 YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDE 225
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
EA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L AL
Sbjct: 226 EAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAAL 285
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSG 342
RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++SSG
Sbjct: 286 GRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSG 345
Query: 343 DMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 346 GTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 385
>gi|62321808|dbj|BAD95432.1| RING3 protein-like [Arabidopsis thaliana]
Length = 386
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/408 (53%), Positives = 278/408 (68%), Gaps = 49/408 (12%)
Query: 2 EPMSGLNQDLGNVGLGKAEGDT-VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDN- 59
EP+ N D+ N L G+ E+E +D+I +V QLEQK+ +VE FY TKD
Sbjct: 8 EPVLVPNCDVENTELAVFNGNGESELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGA 67
Query: 60 -----------------NQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQ 102
+QPN SK S KEK K +HV+S
Sbjct: 68 AQTNTSKSSSGGKKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------P 108
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+L RQFA +FRQI QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 109 DLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE--- 165
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +E
Sbjct: 166 YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDE 225
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
EA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L AL
Sbjct: 226 EAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAAL 285
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSG 342
RLSPEDL KAL++V+E+NPSF A A EV LD+D Q+++TLWRLKVFVQE+LKAA++SSG
Sbjct: 286 GRLSPEDLSKALKMVSESNPSFPAGAPEVGLDIDVQTDVTLWRLKVFVQEALKAANKSSG 345
Query: 343 DMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 346 GTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 385
>gi|297826963|ref|XP_002881364.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
gi|297327203|gb|EFH57623.1| imbibition-inducible 1 [Arabidopsis lyrata subsp. lyrata]
Length = 386
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/409 (52%), Positives = 278/409 (67%), Gaps = 51/409 (12%)
Query: 2 EPMSGLNQDLGNVGLG--KAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDN 59
EP+ N D+ N L G+T E+E +D+I +V QLEQK+ +VE FY +KD
Sbjct: 8 EPVLVPNCDVENTELAVFYVNGET-ELEDFGTCVDEITDRVNQLEQKVVEVEHFYSSKDG 66
Query: 60 ------------------NQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRM 101
+QPN SK S KEK K +HV+S
Sbjct: 67 AAQTNTSKSNSGGKKVAISQPNNSKCNSAGKEKSKGKHVSS------------------- 107
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+L RQFA +FRQI QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 108 PDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE-- 165
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 221
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +
Sbjct: 166 -YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQAD 224
Query: 222 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
EEA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L A
Sbjct: 225 EEAEKHANKQLTLEAAQAEMARDLSNELYEIDLQLERLRESVVQRCRKLSTQEKKGLSAA 284
Query: 282 LTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 341
L RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++ S
Sbjct: 285 LGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKGS 344
Query: 342 GDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
G NNNN + + NKNN KR++EI DA+ K + KR KK
Sbjct: 345 GGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASTKRAKK 385
>gi|3033386|gb|AAC12830.1| putative RING3 protein [Arabidopsis thaliana]
Length = 400
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 217/422 (51%), Positives = 279/422 (66%), Gaps = 63/422 (14%)
Query: 2 EPMSGLNQDLGNVGLGKAEGDT-VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDN- 59
EP+ N D+ N L G+ E+E +D+I +V QLEQK+ +VE FY TKD
Sbjct: 8 EPVLVPNCDVENTELAVFNGNGESELENFGTCVDEITDRVNQLEQKVVEVEHFYSTKDGA 67
Query: 60 -----------------NQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQ 102
+QPN SK S KEK K +HV+S
Sbjct: 68 AQTNTSKSNSGGKKIAISQPNNSKGNSAGKEKSKGKHVSS-------------------P 108
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+L RQFA +FRQI QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ +
Sbjct: 109 DLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE--- 165
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y NVREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +E
Sbjct: 166 YSNVREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDE 225
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC--------------R 268
EA+ + QLT EA Q A++L +EL E+D+QLE LRE+V+Q+C R
Sbjct: 226 EAEKHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRVRNRVFGVVLEINR 285
Query: 269 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 328
K+ST+EKK L AL RLSPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKV
Sbjct: 286 KLSTQEKKGLSAALGRLSPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKV 345
Query: 329 FVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRT 388
FVQE+LKAA++SSG NNNN + + NKNN KR++EI DA+ K ++KR
Sbjct: 346 FVQEALKAANKSSGGTNAQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRA 397
Query: 389 KK 390
KK
Sbjct: 398 KK 399
>gi|255583928|ref|XP_002532712.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223527558|gb|EEF29679.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 401
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/386 (54%), Positives = 273/386 (70%), Gaps = 27/386 (6%)
Query: 21 GDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHV 80
D E+E N++ID++ KV +LEQ +N VEQFY+T +N+QP+ KS SI K+K+K +++
Sbjct: 22 SDVSELERFNRSIDELFSKVHELEQGVNLVEQFYMTAENSQPDNPKSSSIMKDKVKKKYL 81
Query: 81 ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYE 140
+IEK+QQ+A E AA +RMQ+L QFA IF QITQHKWAWPFM PVDV L L+DYYE
Sbjct: 82 TNIEKEQQNASQSEAAAEKRMQQLIHQFAGIFYQITQHKWAWPFMEPVDVVRLCLNDYYE 141
Query: 141 V----------IEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV--FKNAMKYNDERD 188
V +E+P F+ + + ++ I L+ FKNAMKYNDERD
Sbjct: 142 VKLNAISKSYQLEQPT-FTV----------SYHSSLIVICHFFPLIAGFKNAMKYNDERD 190
Query: 189 DVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSE 248
DVHVMA++LLEKFEEKWLQLLPKV EEEKR+E+ + AQ ++L QE N A+ L +E
Sbjct: 191 DVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKVKVAAQSAIELAQEVSHANMARNLNNE 250
Query: 249 LNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 308
L++VDMQLE LR V+QKCR+ S EEKK LG ALTRLSPE+L +ALEIVA++NPSF ATA
Sbjct: 251 LSDVDMQLEKLRNIVVQKCRRTSVEEKKKLGAALTRLSPENLTRALEIVADDNPSFQATA 310
Query: 309 QEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDN---NNEKD-NSNK 364
Q VDLDMD QSE TLWRL+VFV+++LK ++ MGG+NN+ N DN NN+K N+
Sbjct: 311 QVVDLDMDTQSESTLWRLRVFVKDALKDMGTNAMGMGGSNNDENKDNIKINNKKSKNTAA 370
Query: 365 KNKNNPKRKKEICDALAKPAVKRTKK 390
NN KR++EICDA+ K + K+ +K
Sbjct: 371 TATNNNKRRREICDAITKTSAKKARK 396
>gi|147833163|emb|CAN77592.1| hypothetical protein VITISV_020474 [Vitis vinifera]
Length = 346
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/353 (62%), Positives = 260/353 (73%), Gaps = 24/353 (6%)
Query: 42 QLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKD--RHVASIEKQQQDAFHREEAAGR 99
QLEQ++N+VEQFYLT Q N SK SI K+K KD RHVAS++KQQQDA RE AA +
Sbjct: 14 QLEQRVNEVEQFYLTASKKQLNVSKGSSIVKDKDKDKERHVASVKKQQQDASRREAAAAK 73
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
RMQEL RQF I RQITQHKWAWPFM PVDVEGLGLHDYYE P +M G+
Sbjct: 74 RMQELMRQFGTILRQITQHKWAWPFMQPVDVEGLGLHDYYEQRMVP------DIRMSGR- 126
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
I ADVRLVFKNAMKYNDER DVHVMAK+LL KFEEKWLQLLPKV EE+KR+
Sbjct: 127 ---------ICADVRLVFKNAMKYNDERRDVHVMAKTLLGKFEEKWLQLLPKVAEEDKRR 177
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
EEEEA+AQLDM L QEA A+++ +EL E+DM L+++RE ++QKCRK STEEK+ LG
Sbjct: 178 EEEEAEAQLDMHLAQEAAHAKMARDISNELYEIDMHLDDIREMIVQKCRKTSTEEKRKLG 237
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
AL+RLS EDL KALEIVA++NPSF ATA+EV LD+DAQ E TLWRLK FV+++L+ +
Sbjct: 238 AALSRLSAEDLSKALEIVAQSNPSFQATAEEVHLDIDAQRESTLWRLKFFVKDALEIQGK 297
Query: 340 SSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 392
SS MGGNN +N++ NN KRKKEICDA+AK A K+ KKLP
Sbjct: 298 SSASMGGNNTATT------TNNNHPTTNNNXKRKKEICDAIAKTAKKKNKKLP 344
>gi|357517357|ref|XP_003628967.1| Global transcription factor group [Medicago truncatula]
gi|355522989|gb|AET03443.1| Global transcription factor group [Medicago truncatula]
Length = 365
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/361 (54%), Positives = 262/361 (72%), Gaps = 17/361 (4%)
Query: 26 VEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEK 85
+EG ++D+ +V L++++ +VE +Y + Q N+S+ S+ KEK +++ +A +
Sbjct: 15 LEGFRNSVDEFRTQVDNLQKQVIEVEHYYESSGIFQGNSSRGGSVVKEKGREKTLAGTKT 74
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKP 145
QDA E AAG+RMQEL RQF+ I RQITQHKWAWPF+ PVDVEGLGLHDYYE+I+KP
Sbjct: 75 PLQDALRTETAAGKRMQELMRQFSTILRQITQHKWAWPFLEPVDVEGLGLHDYYEIIDKP 134
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDF TIKNKM+ KDGTGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+L+EKFE+KW
Sbjct: 135 MDFGTIKNKMEAKDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLMEKFEDKW 194
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
L LLPKV EEEKRQ EEEA+ Q+D+ L QE + AK+L +ELNEV ++L RE VIQ
Sbjct: 195 LLLLPKVAEEEKRQIEEEAQVQMDIHLAQETTYADMAKDLSNELNEVGIRLMEFREKVIQ 254
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 325
CRK+ST EKK LG A+ +LSPE+L +AL++VAE NPSF +TA EV LD++AQS+ T+WR
Sbjct: 255 NCRKLSTGEKKALGKAIAKLSPENLQRALDLVAEINPSFESTADEVVLDINAQSDYTVWR 314
Query: 326 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNK-------NNPKRKKEICD 378
L FV+ +L+ G G NN+ + EK S++K + NP + +++
Sbjct: 315 LYHFVKGALE------GQQGTAVNNDTE----EKRYSSRKRREFSDDHAKNPSKSRKLST 364
Query: 379 A 379
+
Sbjct: 365 S 365
>gi|42571057|ref|NP_973602.1| Transcription factor GTE6 [Arabidopsis thaliana]
gi|330253942|gb|AEC09036.1| Transcription factor GTE6 [Arabidopsis thaliana]
Length = 276
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 228/285 (80%), Gaps = 11/285 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQFA +FRQI QHKWAWPF+ PVDV+GLGLHDYY+VIEKPMD TIK KM+ + Y N
Sbjct: 2 RQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSE---YSN 58
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
VREIYADVRLVFKNAM+YN+E++DV+VMA+SLLEKFEEKWL ++PK++EEEK+Q +EEA+
Sbjct: 59 VREIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAE 118
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
+ QLT EA Q A++L +EL E+D+QLE LRE+V+Q+CRK+ST+EKK L AL RL
Sbjct: 119 KHANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRL 178
Query: 286 SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMG 345
SPEDL KAL++V+E+NPSF A A EV+LD+D Q+++TLWRLKVFVQE+LKAA++SSG
Sbjct: 179 SPEDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTN 238
Query: 346 GNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
NNNN + + NKNN KR++EI DA+ K ++KR KK
Sbjct: 239 AQNNNNT--------GTGEINKNNAKRRREISDAINKASIKRAKK 275
>gi|55296460|dbj|BAD68656.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
gi|55297001|dbj|BAD68476.1| DNA-binding bromodomain-containing protein-like [Oryza sativa
Japonica Group]
Length = 360
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 238/370 (64%), Gaps = 47/370 (12%)
Query: 24 VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASI 83
EV+ + ++D++ K QLE+++N+V FY K +H +
Sbjct: 36 TEVDAFRRQVEDLVSKTDQLERRVNEVVGFYDGK--------------------KHGSGG 75
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIE 143
K A ++ + + M +L RQF I RQIT H+WA PF+ PVDV GL L DYY++I
Sbjct: 76 RK----AGRKDSSLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIIT 131
Query: 144 KPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
KPMDFSTI+ KM+GKD Y NVREIY+DVRL+F NAMKYNDER DVH+MAKSLLEKFEE
Sbjct: 132 KPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEE 191
Query: 204 KWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
KWLQLLPKV EE++Q++EE+ + ++ E AK+ +EL E++ QLE LR+ V
Sbjct: 192 KWLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMV 251
Query: 264 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 323
+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A E++LDMDAQSE TL
Sbjct: 252 VQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTL 311
Query: 324 WRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAK 382
WRLK FV+E+L + A+ +SG + N KRK+EIC+ALA+
Sbjct: 312 WRLKFFVREALERQANVASG----------------------RTDENAKRKREICNALAR 349
Query: 383 PAVKRTKKLP 392
A KR K+ P
Sbjct: 350 TASKRVKQQP 359
>gi|125553971|gb|EAY99576.1| hypothetical protein OsI_21551 [Oryza sativa Indica Group]
gi|125595985|gb|EAZ35765.1| hypothetical protein OsJ_20055 [Oryza sativa Japonica Group]
Length = 344
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 238/370 (64%), Gaps = 47/370 (12%)
Query: 24 VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASI 83
EV+ + ++D++ K QLE+++N+V FY K +H +
Sbjct: 20 TEVDAFRRQVEDLVSKTDQLERRVNEVVGFYDGK--------------------KHGSGG 59
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIE 143
K A ++ + + M +L RQF I RQIT H+WA PF+ PVDV GL L DYY++I
Sbjct: 60 RK----AGRKDSSLSKGMPDLMRQFGTIVRQITSHEWAEPFLKPVDVVGLQLDDYYKIIT 115
Query: 144 KPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
KPMDFSTI+ KM+GKD Y NVREIY+DVRL+F NAMKYNDER DVH+MAKSLLEKFEE
Sbjct: 116 KPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAMKYNDERHDVHIMAKSLLEKFEE 175
Query: 204 KWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
KWLQLLPKV EE++Q++EE+ + ++ E AK+ +EL E++ QLE LR+ V
Sbjct: 176 KWLQLLPKVENEERKQKDEESNGVPKVNISPEEAIAKLAKDTDNELIEINKQLEELRQMV 235
Query: 264 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 323
+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A E++LDMDAQSE TL
Sbjct: 236 VQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKGDELELDMDAQSETTL 295
Query: 324 WRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAK 382
WRLK FV+E+L + A+ +SG + N KRK+EIC+ALA+
Sbjct: 296 WRLKFFVREALERQANVASG----------------------RTDENAKRKREICNALAR 333
Query: 383 PAVKRTKKLP 392
A KR K+ P
Sbjct: 334 TASKRVKQQP 343
>gi|224057894|ref|XP_002299377.1| global transcription factor group [Populus trichocarpa]
gi|222846635|gb|EEE84182.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/224 (73%), Positives = 195/224 (87%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I QI QHKWAWPF+ PVDVEGL LHDYYEVIEKPMDF TIKN+M+ KDGTGY+NVREIY
Sbjct: 1 IAHQIAQHKWAWPFLEPVDVEGLCLHDYYEVIEKPMDFRTIKNRMEAKDGTGYKNVREIY 60
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRLVFKNAMKYNDERDDVHVMA++LLEKFEEKWLQLLPKV EEEKR+E+E+ Q+
Sbjct: 61 ADVRLVFKNAMKYNDERDDVHVMARTLLEKFEEKWLQLLPKVAEEEKRREKEQTATQVAT 120
Query: 231 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDL 290
+L +E+ N A++L +EL+ VDMQLE +RE V++ RK+STEEKK LGTALT+LS +DL
Sbjct: 121 KLAEESSYANMAQDLSNELHGVDMQLERIREMVVRNSRKISTEEKKKLGTALTQLSHQDL 180
Query: 291 CKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL 334
+ALEIVAE+NPSF ATAQEV+LDMD QS++TLWRLKVFVQ++L
Sbjct: 181 IRALEIVAEHNPSFQATAQEVNLDMDTQSDVTLWRLKVFVQDAL 224
>gi|297819940|ref|XP_002877853.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
gi|297323691|gb|EFH54112.1| hypothetical protein ARALYDRAFT_485593 [Arabidopsis lyrata subsp.
lyrata]
Length = 371
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/369 (49%), Positives = 249/369 (67%), Gaps = 9/369 (2%)
Query: 10 DLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSIS 69
+LG+V G + +V+ E + + +D++LQ V LE KL +VE+FY + S S S
Sbjct: 7 ELGHVAGGGLQVFSVDAECIKQRVDEVLQWVDSLEHKLKEVEEFY-----SSIGVSNSGS 61
Query: 70 IAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVD 129
I K+ K RHV I K QQ+A RE A +RMQ+L RQF IFRQITQHK AWPFMHPV+
Sbjct: 62 IGKDTDKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVN 121
Query: 130 VEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDD 189
VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V ++YAD+RLVF+NAM YN+E D
Sbjct: 122 VEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVLQVYADMRLVFENAMNYNEETSD 181
Query: 190 VHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSEL 249
V+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +EA ++L +E+
Sbjct: 182 VYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAATEALLAKEASHIKTTRDLGNEI 241
Query: 250 NEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ 309
+ +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L IVA+ +PSF A+
Sbjct: 242 CHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQADPSFQPRAE 301
Query: 310 EVDLDMDAQSELTLWRLKVFVQESLKAA----SRSSGDMGGNNNNNNDDNNNEKDNSNKK 365
EV ++MD E TLWRLK FV+++L A G N + +N+++ +NK
Sbjct: 302 EVSIEMDILDEPTLWRLKFFVKDALDNAMKKKKEEETKTGALNGTQKKEVSNKRNATNKL 361
Query: 366 NKNNPKRKK 374
+ KR +
Sbjct: 362 AERKTKRSR 370
>gi|15231174|ref|NP_190796.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|75172388|sp|Q9FT54.1|GTE6_ARATH RecName: Full=Transcription factor GTE6; AltName:
Full=Bromodomain-containing protein GTE6; AltName:
Full=Protein GENERAL TRANSCRIPTION FACTOR GROUP E6;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E6
gi|10045561|emb|CAC07919.1| putative protein [Arabidopsis thaliana]
gi|332645404|gb|AEE78925.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 369
Score = 334 bits (856), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/326 (55%), Positives = 233/326 (71%), Gaps = 5/326 (1%)
Query: 12 GNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIA 71
G+V G +G +V+ E + + +D++LQ V LE KL +VE+FY + S S SI
Sbjct: 7 GHVAGGGLQGFSVDAECIKQRVDEVLQWVDSLEHKLKEVEEFY-----SSIGVSNSGSIG 61
Query: 72 KEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVE 131
K+ K RHV I K QQ+A RE A +RMQ+L RQF IFRQITQHK AWPFMHPV+VE
Sbjct: 62 KDTEKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVE 121
Query: 132 GLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVH 191
GLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+RLVF+NAM YN+E DV+
Sbjct: 122 GLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVY 181
Query: 192 VMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNE 251
MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +EA +EL +E+
Sbjct: 182 SMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAKEASHIKTTRELGNEICH 241
Query: 252 VDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEV 311
+ +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L IVA+ NPSF A+EV
Sbjct: 242 ANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEV 301
Query: 312 DLDMDAQSELTLWRLKVFVQESLKAA 337
++MD E TLWRLK FV+++L A
Sbjct: 302 SIEMDILDEPTLWRLKFFVKDALDNA 327
>gi|357118940|ref|XP_003561205.1| PREDICTED: transcription factor GTE1-like [Brachypodium distachyon]
Length = 343
Score = 333 bits (854), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 179/369 (48%), Positives = 233/369 (63%), Gaps = 40/369 (10%)
Query: 24 VEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASI 83
VE + + ++DI K LE+K+N+V +FY K + S R+ A+
Sbjct: 14 VEADAFRRQVEDIASKADVLEKKVNEVVRFYDGKKHGSGGRKAGGS-------GRYAAN- 65
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIE 143
+ + M EL RQF I R +T H WA PF+ PVDV GL L DYY++I
Sbjct: 66 ----------GGSHCKGMSELMRQFGGIIRTVTNHDWAEPFLKPVDVVGLQLDDYYKIIT 115
Query: 144 KPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
KPMDFSTI+NKM+GKDGT Y NVREIY+DVRL+F NAMKYNDE DVH+MAK LLE+FEE
Sbjct: 116 KPMDFSTIRNKMEGKDGTKYNNVREIYSDVRLIFANAMKYNDEHHDVHIMAKLLLERFEE 175
Query: 204 KWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
KWL LLPKV E E+R+ +EE + EA AK+ ELNE++ QLE+LR+ V
Sbjct: 176 KWLHLLPKV-ENEERKIKEEPNDVPSTNTSPEAAIAKLAKDTDDELNEINKQLEDLRKMV 234
Query: 264 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTL 323
+Q+CRKM+T+EK+ LG L L+P+DL KALE+VA++NPSF + +EVDLDMDAQ+E TL
Sbjct: 235 VQRCRKMTTDEKRKLGAGLCHLTPDDLSKALEMVAQDNPSFQISGEEVDLDMDAQTETTL 294
Query: 324 WRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKP 383
WRLK FV+E+L+ ++++ D K N KRK+EIC+ALAK
Sbjct: 295 WRLKFFVREALERQAKAAPD---------------------KTDENAKRKREICNALAKT 333
Query: 384 AVKRTKKLP 392
KR KK P
Sbjct: 334 NSKRIKKQP 342
>gi|356532581|ref|XP_003534850.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 578
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/332 (50%), Positives = 234/332 (70%), Gaps = 14/332 (4%)
Query: 37 LQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEA 96
+Q LE+++ +V+++Y T N+Q N AK+K +++HV ++ +Q +E
Sbjct: 259 VQMCASLEEQVAEVQKYYSTI-NDQVNN------AKDKSQEKHVIGTKRSRQGGSSKEAN 311
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+ M+E+ QF+ IF QITQH+WAWPFM PVDVEGLGL DYY++IEKPMDF TIK KMD
Sbjct: 312 SSNTMKEVMHQFSTIFHQITQHRWAWPFMDPVDVEGLGLSDYYQIIEKPMDFGTIKRKMD 371
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
KDG+GY+NVR+IY+DV LVFKNAMKYNDE+ D+H+MAK+L EKFE+KWLQLLPKV + E
Sbjct: 372 AKDGSGYKNVRQIYSDVTLVFKNAMKYNDEKTDIHIMAKTLREKFEKKWLQLLPKVAQAE 431
Query: 217 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 276
E+EEA+A L +L +EA N K++R L +VD QL+NL+E VI+KCRK+ST EK
Sbjct: 432 --SEKEEARALLKAKLAEEAAYANMTKDIRHALCDVDEQLKNLKEMVIKKCRKLSTHEKL 489
Query: 277 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 336
L L RL+ ++L KA+ I+ E +P+F A +VDLD+D QS+ LW+L +FV+E+L+
Sbjct: 490 ALKKNLNRLNGDNLLKAMAIIHEIDPTFQHDAPQVDLDLDCQSDFILWKLNMFVKEALED 549
Query: 337 ASRSSG-DMGGNNNNNNDDNNNEKDNSNKKNK 367
++ DM N+N N D + N+NK+ K
Sbjct: 550 QDKAVAEDMAVNHNVNTQD----QKNTNKRRK 577
>gi|356558209|ref|XP_003547400.1| PREDICTED: transcription factor GTE1-like [Glycine max]
Length = 349
Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/330 (50%), Positives = 236/330 (71%), Gaps = 14/330 (4%)
Query: 39 KVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAG 98
KV +LE+++ +V++FY T N+Q N AK+K +++HV ++ QQ RE +
Sbjct: 32 KVQKLEEQVAEVQKFYSTI-NDQVND------AKDKGREKHVIGTKRSQQGGSSREANSS 84
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
M+E+ QF+ IF QIT +WAWPFM PVDVEGLGLHDYY++IEKPMDF TIK KM+ K
Sbjct: 85 NTMKEVMHQFSIIFHQITHQRWAWPFMEPVDVEGLGLHDYYQIIEKPMDFGTIKRKMNAK 144
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
DG+GY+NVREIY+DVRLVF+NAMKYN E++DVH+MAK+LLEKFE+KWLQLLPKV + E+
Sbjct: 145 DGSGYKNVREIYSDVRLVFENAMKYNGEKNDVHIMAKTLLEKFEKKWLQLLPKVAQAER- 203
Query: 219 QEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNL 278
E+EEA+ L+ + QEA K++R L +VD QL+NL+E VI+KCRK+ST EK L
Sbjct: 204 -EKEEARVLLEAKRAQEATYAKMTKDIRHALCDVDEQLKNLKEMVIKKCRKLSTHEKLAL 262
Query: 279 GTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAAS 338
L+RL+ +L KA+ I+ E +P+F A +VDLD+D QS+ LW+L +F +E+L+
Sbjct: 263 KKNLSRLNGGNLLKAMSIIHEIDPTFQHDAPQVDLDLDRQSDFILWKLNLFTKEALEDQD 322
Query: 339 RSSG-DMGGNNNNNNDDNNNEKDNSNKKNK 367
+++ +M N+N N +D + N+NK+ K
Sbjct: 323 KAAAEEMAVNHNVNTED----QKNTNKRRK 348
>gi|326490245|dbj|BAJ84786.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 352
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/366 (47%), Positives = 235/366 (64%), Gaps = 36/366 (9%)
Query: 25 EVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIE 84
EV+ + +DD+ K LE+++N+V FY D + ++ +I R+ A+
Sbjct: 23 EVDSFRRQVDDLASKTDVLERRVNEVVGFY---DGKKHGSAGRRAIGSS----RYAANGA 75
Query: 85 KQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 144
+ ++ + M +L RQ A I RQIT H+W+ PF+ PVDV GL L DYY++I K
Sbjct: 76 R---------DSNCKGMPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYYKIITK 126
Query: 145 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
PMDFSTI+NKM+GKDGT Y++VREIY+DVRL+F NAM YNDE DVH+MAK LLEKFEEK
Sbjct: 127 PMDFSTIQNKMEGKDGTKYKSVREIYSDVRLIFTNAMTYNDELHDVHIMAKLLLEKFEEK 186
Query: 205 WLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 264
WLQLLPKV EE++Q+ E A ++A+ AK+ ELNE++ QLE LR V+
Sbjct: 187 WLQLLPKVENEERKQQMETNDAPTTDTSPEDAI-AQLAKDTDDELNEINKQLEELRNMVV 245
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
Q+C+KM+T+EK+ LG L L+PED KALE+VA++NP F TA+E+DLDMDAQSE TLW
Sbjct: 246 QRCKKMTTDEKRKLGAGLCHLTPEDFSKALELVAQDNPDFQTTAEELDLDMDAQSETTLW 305
Query: 325 RLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPA 384
RLK FV+E+L+ + + G K N KRK++I +ALAK A
Sbjct: 306 RLKFFVREALERQANPAAAPG-------------------KTDENAKRKRDIYNALAKTA 346
Query: 385 VKRTKK 390
KR ++
Sbjct: 347 SKRIRR 352
>gi|294462729|gb|ADE76909.1| unknown [Picea sitchensis]
Length = 377
Score = 323 bits (829), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/370 (47%), Positives = 239/370 (64%), Gaps = 36/370 (9%)
Query: 29 LNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASI---EK 85
L + +D + KV QLEQK+N+V +F+++ ++ SKS + L+DR I +
Sbjct: 35 LRQEVDYMTSKVEQLEQKVNEVARFHISSSKDKIQHSKSGLV----LRDREREKINLNHR 90
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKP 145
+QQ+A RE +RM EL RQF+ I RQITQH+WAWPFM PVDV+GLGLHDY++VI+KP
Sbjct: 91 KQQEASRREAGCSKRMAELMRQFSTILRQITQHRWAWPFMTPVDVKGLGLHDYHDVIKKP 150
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDF TI+ KMD KD TGY+NV +I DVRLVFKNA+ YND++ DVHVMAK+L +KFEEKW
Sbjct: 151 MDFGTIRRKMDAKDATGYKNVCDICEDVRLVFKNAVTYNDDQSDVHVMAKTLSQKFEEKW 210
Query: 206 LQLLPKV----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRE 261
L PKV +K + + ++ +D +L+ E ++L EL+E++ LE LR+
Sbjct: 211 KTLWPKVNEEEARRKKEEADANSREMVDSRLSGE----TDLEKLGGELDELNEHLEKLRQ 266
Query: 262 TVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
+ KCR MS EEK+ LG +L +LSPEDL KAL+I+A+ NPSF T EV+LD+DAQ
Sbjct: 267 ELAPKCRMMSVEEKRQLGESLGKLSPEDLTKALQIIAQKNPSFIPTEDEVELDIDAQDAS 326
Query: 322 TLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 381
TLWRL+ FV+ L +++ S K + KRKKEICDA+A
Sbjct: 327 TLWRLQYFVKAVLSVQAKT---------------------SIAKAQAKTKRKKEICDAIA 365
Query: 382 KPAVKRTKKL 391
K A KR +K+
Sbjct: 366 KNARKRIRKM 375
>gi|195655085|gb|ACG47010.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 323 bits (828), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 235/393 (59%), Gaps = 48/393 (12%)
Query: 1 MEPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNN 60
M P +G G + E E + + +DD++ K LE+++ +V FY
Sbjct: 1 MTPANGAPARAAEAGPHEVES---EADAFRRQVDDLVSKTDVLERRVKEVADFY------ 51
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKW 120
D ++ R A+ R M +L RQF + ++IT HK
Sbjct: 52 ----------------DGKKHGSGGRKGGGGGRYGASSRGMPDLMRQFGVLLKEITSHKD 95
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
AWPF+ PVDV L L DY+ +I +PMDFSTI+ KM+ KDGT Y NVREI +DVRL+F NA
Sbjct: 96 AWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANA 155
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTN 240
MKYND+++ +H+MAKSLLEKFEEKWL LPKV EEKRQ+EEE+K ++E
Sbjct: 156 MKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSREVAIVK 215
Query: 241 KAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 300
AK+ ELN+++ +LE LR+ V+ +CRKM+T+EK+ LG + LSP+DL KALEIVA++
Sbjct: 216 LAKDTDDELNQINRKLEELRKMVVHRCRKMTTDEKRKLGAVICHLSPDDLSKALEIVAQD 275
Query: 301 NPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEK 359
NPSF A+EVDLDMDAQSE TLWRLK FV+E+L + A+ +SG M
Sbjct: 276 NPSFQTKAEEVDLDMDAQSETTLWRLKFFVREALERQANVASGKMD-------------- 321
Query: 360 DNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 392
N KRK+EIC+ALAK +R KK P
Sbjct: 322 --------ENAKRKREICNALAKTTSRRIKKQP 346
>gi|194696466|gb|ACF82317.1| unknown [Zea mays]
gi|413942791|gb|AFW75440.1| transcription factor GTE6 [Zea mays]
Length = 346
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 176/393 (44%), Positives = 235/393 (59%), Gaps = 48/393 (12%)
Query: 1 MEPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNN 60
M P +G G + E E + + +DD++ K LE+++ +V FY
Sbjct: 1 MTPANGAPARAAEAGPHEVES---EADAFRRQVDDLVSKTDVLERRVKEVADFY------ 51
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKW 120
D ++ R A+ R M +L RQF + ++IT HK
Sbjct: 52 ----------------DGKKHGSGGRKGGGGGRYGASSRGMPDLMRQFGVLLKEITSHKD 95
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
AWPF+ PVDV L L DY+ +I +PMDFSTI+ KM+ KDGT Y NVREI +DVRL+F NA
Sbjct: 96 AWPFLEPVDVVTLQLPDYHNIITQPMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANA 155
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTN 240
MKYND+++ +H+MAKSLLEKFEEKWL LPKV EEKRQ+EEE+K ++E
Sbjct: 156 MKYNDDQNVIHLMAKSLLEKFEEKWLHFLPKVESEEKRQKEEESKGVAATNTSREVAIVK 215
Query: 241 KAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 300
AK+ ELN+++ +LE LR+ V+ +CRKM+T+EK+ LG + LSP+DL KALEIVA++
Sbjct: 216 LAKDTDDELNQINKKLEELRKMVVHRCRKMTTDEKRKLGAGICHLSPDDLSKALEIVAQD 275
Query: 301 NPSFHATAQEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEK 359
NPSF A+EVDLDMDAQSE TLWRLK FV+E+L + A+ +SG M
Sbjct: 276 NPSFQTKAEEVDLDMDAQSETTLWRLKFFVREALERQANVASGKMD-------------- 321
Query: 360 DNSNKKNKNNPKRKKEICDALAKPAVKRTKKLP 392
N KRK+EIC+ALAK +R KK P
Sbjct: 322 --------ENAKRKREICNALAKTTSRRIKKQP 346
>gi|334185931|ref|NP_001190072.1| transcription factor GTE6 [Arabidopsis thaliana]
gi|332645405|gb|AEE78926.1| transcription factor GTE6 [Arabidopsis thaliana]
Length = 386
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 178/343 (51%), Positives = 232/343 (67%), Gaps = 22/343 (6%)
Query: 12 GNVGLGKAEGDTVEVEGLNKTIDD-----------------ILQKVTQLEQKLNDVEQFY 54
G+V G +G +V+ E + + +D+ +L + LE KL +VE+FY
Sbjct: 7 GHVAGGGLQGFSVDAECIKQRVDEGFSLNNVVYRVLNLGIFVLHRYELLEHKLKEVEEFY 66
Query: 55 LTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQ 114
+ S S SI K+ K RHV I K QQ+A RE A +RMQ+L RQF IFRQ
Sbjct: 67 -----SSIGVSNSGSIGKDTEKGRHVVGIRKIQQEAARREAVAAKRMQDLMRQFGTIFRQ 121
Query: 115 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 174
ITQHK AWPFMHPV+VEGLGLHDY+EVI+KPMDFSTIKN+M+ KDGTGY++V +IYAD+R
Sbjct: 122 ITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMR 181
Query: 175 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ 234
LVF+NAM YN+E DV+ MAK LLEKFEEKW LPKV EEEK +EEEE +A + L +
Sbjct: 182 LVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEEEKIREEEEKQAAKEALLAK 241
Query: 235 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 294
EA +EL +E+ + +LE L V+++CRK++ EEK+N+G AL +LSP+DL K L
Sbjct: 242 EASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEKRNIGLALLKLSPDDLQKVL 301
Query: 295 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA 337
IVA+ NPSF A+EV ++MD E TLWRLK FV+++L A
Sbjct: 302 GIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALDNA 344
>gi|242091894|ref|XP_002436437.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
gi|241914660|gb|EER87804.1| hypothetical protein SORBIDRAFT_10g002570 [Sorghum bicolor]
Length = 346
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 173/369 (46%), Positives = 229/369 (62%), Gaps = 45/369 (12%)
Query: 25 EVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIE 84
E + + +DD++ K LE+++ +V FY D
Sbjct: 22 EADAFRRQVDDLVSKTDVLEKRVKEVVDFY----------------------DGKKHGSG 59
Query: 85 KQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 144
++ R A R M +L RQF + ++IT HK AWPF+ PVDV L + DY+++I +
Sbjct: 60 GRKGGGGGRHGAYSRGMPDLMRQFGVLLKEITSHKDAWPFLKPVDVVTLHIPDYHKIITQ 119
Query: 145 PMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
PMDFSTI+ KM+ KDGT Y NVREI +DVRL+F NAMKYND+++ VH+MAKSLLEKFEEK
Sbjct: 120 PMDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVVHLMAKSLLEKFEEK 179
Query: 205 WLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 264
WL LPKV EEKRQ+EEE+K ++E AK+ ELN+++ +LE LR+ V+
Sbjct: 180 WLHFLPKVESEEKRQKEEESKGVAATNTSREVAIAKLAKDTDDELNQINRKLEELRKMVV 239
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
+CRKM+T+EK+ LG + LSP+DL KALEIVA++NPSF A+EVDLDMDAQSE TLW
Sbjct: 240 HRCRKMTTDEKRKLGAGICHLSPDDLNKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLW 299
Query: 325 RLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKP 383
RLK FV+E+L + A+ +SG M N KRK+EIC+ALAK
Sbjct: 300 RLKFFVREALERQANVASGKMD----------------------ENAKRKREICNALAKT 337
Query: 384 AVKRTKKLP 392
A KR KK P
Sbjct: 338 ASKRIKKQP 346
>gi|326495086|dbj|BAJ85639.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 269
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/290 (53%), Positives = 199/290 (68%), Gaps = 21/290 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M +L RQ A I RQIT H+W+ PF+ PVDV GL L DY+++I KPMDFSTI+NKM+GKDG
Sbjct: 1 MPDLMRQLAGIIRQITSHEWSAPFLQPVDVVGLQLDDYHKIITKPMDFSTIQNKMEGKDG 60
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 220
T Y++VREIY+DVRL+F NAM YNDE DVH+MAK LL+KFEEKWLQLLPKV EE++
Sbjct: 61 TKYKSVREIYSDVRLIFNNAMTYNDEHHDVHIMAKLLLDKFEEKWLQLLPKVENEERKHV 120
Query: 221 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 280
E D + E AK+ ELNE++ QLE LR V+Q+C+KM+T+EK+ LG
Sbjct: 121 EPNDAPTTDT--SPEDAIAKLAKDTDDELNEINRQLEELRNMVVQRCKKMTTDEKRKLGA 178
Query: 281 ALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRS 340
L L+PEDL KALE+VA++NP F TA+EV LDMDAQSE TLWRLK FV+E+L+ + +
Sbjct: 179 GLCHLTPEDLSKALELVAQDNPDFQTTAEEVHLDMDAQSETTLWRLKFFVREALERQANT 238
Query: 341 SGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAVKRTKK 390
+ G K N KRK++I +ALAK A KR ++
Sbjct: 239 AAAPG-------------------KTDENAKRKRDIYNALAKTASKRIRR 269
>gi|357497929|ref|XP_003619253.1| Global transcription factor group [Medicago truncatula]
gi|355494268|gb|AES75471.1| Global transcription factor group [Medicago truncatula]
Length = 478
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 217/308 (70%), Gaps = 28/308 (9%)
Query: 42 QLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRM 101
QLEQK ++ + F+ + + Q +TSK+ S K+K K++HV SI+K QQDA RE AA +RM
Sbjct: 6 QLEQKGHETDSFFSSTNKKQTDTSKNNSTLKDKDKEKHVPSIKKLQQDASRREAAAQKRM 65
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
Q+L RQF I R+I I+KPMDF+TIKN+++ DGT
Sbjct: 66 QDLIRQFGPILRRI--------------------------IDKPMDFNTIKNQIEANDGT 99
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 221
GY++V E ADVRLVFKNAMKYNDER DVHVMAK+L EKFEEKWLQ LP+V EEE R+EE
Sbjct: 100 GYKHVWEACADVRLVFKNAMKYNDERSDVHVMAKTLREKFEEKWLQFLPRVAEEETRREE 159
Query: 222 EEAKAQLDMQLTQEAVQTNKAKELRSE--LNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
EEA+A+L MQ QEA AK L +E L+EVD+ LE LRE V++KCRKMSTEEK+NLG
Sbjct: 160 EEAEARLAMQFAQEAAHAKMAKHLSNELMLDEVDLHLEELREMVVKKCRKMSTEEKRNLG 219
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
ALT+LSP+DL +AL IV + NPSF A A E DLD+DAQS+ TLWRL FV ++L+ S+
Sbjct: 220 IALTKLSPDDLRRALNIVTQTNPSFQANAVEADLDIDAQSQSTLWRLNFFVMDALEVQSQ 279
Query: 340 SSGDMGGN 347
+S M G+
Sbjct: 280 NSESMDGD 287
>gi|388497474|gb|AFK36803.1| unknown [Lotus japonicus]
Length = 236
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/247 (60%), Positives = 196/247 (79%), Gaps = 13/247 (5%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDFSTIK+KM+ +DGTGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+LLEKFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
LQLLPKV EEEKR EEEA AQLD+QL QE N A++L EL +VDM+L++L+E VIQ
Sbjct: 61 LQLLPKVAEEEKRLLEEEALAQLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 325
KCRK+S +EK+ LG+ALT+LS ++L +ALEIVAENNP F ++ +EVDLD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 326 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAV 385
LKVFV+++L+A + +G + N+N +N K+N KR++E+ D+LA +
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVNDNLDN-------------KKSNSKRRRELIDSLANTNI 227
Query: 386 KRTKKLP 392
K+T+KL
Sbjct: 228 KKTRKLS 234
>gi|357490537|ref|XP_003615556.1| Bromodomain-containing protein [Medicago truncatula]
gi|355516891|gb|AES98514.1| Bromodomain-containing protein [Medicago truncatula]
Length = 322
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 49/352 (13%)
Query: 24 VEVEGLNKT---IDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTS-----KSISIAKEKL 75
+ E LN+ + + +V +L +++NDVEQFY + D Q + K + +K+ L
Sbjct: 10 ISTEDLNRYRHFLSQLDSQVNKLGKQVNDVEQFYQSTDVQQNDCKYKGREKPPTGSKKAL 69
Query: 76 KDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGL 135
K R ++ + DAF F QI + KWAWPF+ PVDVEGLGL
Sbjct: 70 K-RASEDMQAEMSDAFS-------------------FSQIAKDKWAWPFLDPVDVEGLGL 109
Query: 136 HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 195
+DYY++IEKPMDFSTIK +M+ KDG+GY+NVREIYADVRL+FKNAMKYNDE++DVHVMAK
Sbjct: 110 YDYYQIIEKPMDFSTIKIRMEAKDGSGYKNVREIYADVRLIFKNAMKYNDEKNDVHVMAK 169
Query: 196 SLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQ 255
+LLEKFE +EEA +L+ +L QEA N +EL +EL++VDM
Sbjct: 170 TLLEKFENDL--------------SKEEAHEELNKRLAQEATYANMTRELSTELSKVDMA 215
Query: 256 LENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDM 315
L +L+ T I +CRK+S EK L A T+LSP+++ KALEIV E+NP+F V LD+
Sbjct: 216 LRSLKTTAISQCRKLSHPEKLILANAFTKLSPDNIVKALEIVKESNPNFKDRIDMVTLDL 275
Query: 316 DAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNK 367
D+QS+ TL+RL +FV+ +L+ G + N++DN E N+ KK +
Sbjct: 276 DSQSDYTLFRLHMFVKNTLEVQE-------GTSVINHEDNIEEMKNNAKKRR 320
>gi|388498404|gb|AFK37268.1| unknown [Lotus japonicus]
Length = 236
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/247 (59%), Positives = 194/247 (78%), Gaps = 13/247 (5%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDFSTIK+KM+ +DGTGY+NVREIYADVRL+FKNAMKYN+E+ DVHVMAK+LLEKFEEKW
Sbjct: 1 MDFSTIKSKMEAEDGTGYKNVREIYADVRLIFKNAMKYNNEKHDVHVMAKTLLEKFEEKW 60
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
LQLLPKV EEEKR EEEA A+LD+QL QE N A++L EL +VDM+L++L+E VIQ
Sbjct: 61 LQLLPKVAEEEKRLLEEEALARLDIQLAQEKTYANLARDLSVELYQVDMKLKDLKEMVIQ 120
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 325
KCRK+S +EK+ LG+ALT+LS ++L +ALEIVAENNP F ++ +EVDLD+DAQS+ TLWR
Sbjct: 121 KCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWR 180
Query: 326 LKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPAV 385
LKVFV+++L+A + +G + N ++ KNN KR++E+ D+LA +
Sbjct: 181 LKVFVKDALEAQGKVAGGVAVN-------------DNLDNKKNNSKRRRELIDSLANTNI 227
Query: 386 KRTKKLP 392
K+T+KL
Sbjct: 228 KKTRKLS 234
>gi|168002796|ref|XP_001754099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694653|gb|EDQ81000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 221/366 (60%), Gaps = 18/366 (4%)
Query: 19 AEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQ--FYLTKDNNQPNTSKSISIAKEKLK 76
E + VE E + + Q+V L K+ ++E+ +T++ N + SK S K +
Sbjct: 134 VEANEVETEVSEAARNLLKQQVQTLTAKVEEIERKIALVTQEKNAESKSKGESGTGLKDR 193
Query: 77 DRHVASIEKQQQ---DAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
D+ ++ K+QQ D + A +R QEL Q I+RQI+QHKWAWPF+ PVDVEGL
Sbjct: 194 DKGCGTLNKKQQYLLDNNRGDVARSKRNQELMNQIRGIWRQISQHKWAWPFLKPVDVEGL 253
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
GLHDY +VIEKPMD TIKNKMD KD +GY++V+E+ D+RLVF NAM YN E DVHVM
Sbjct: 254 GLHDYNDVIEKPMDLGTIKNKMDAKDTSGYQHVQEVCDDMRLVFSNAMTYNPEGSDVHVM 313
Query: 194 AKSLLEKFEEKWLQLL-PKVMEEEKRQEEEEAKAQL---DMQLTQEAVQTNKAKELRSEL 249
+K+L +KFEEKW L+ PK+ EE + ++E+ + QL MQ+ +E ++ +L
Sbjct: 314 SKTLSDKFEEKWKALIEPKLHFEESKTQQEDNEVQLKEAGMQVVEEIDTKKLTEQYLLQL 373
Query: 250 NEVDMQLENLRETVIQKC-RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 308
E+D QLE+L+ C R MS EEK++LG L +L PE+L ++I+A+ NPSF+ +
Sbjct: 374 EELDKQLEDLKRQAAPTCSRAMSIEEKRHLGQNLGKLPPENLSHVIQIIAQRNPSFNINS 433
Query: 309 QEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKN 368
EV++D+DAQ TLWRL+ +VQ L + G + ++ +NKN
Sbjct: 434 DEVEVDIDAQDPATLWRLQRYVQAVLSGS--------GARQTTARNQPTKRSCGYVQNKN 485
Query: 369 NPKRKK 374
+ KR K
Sbjct: 486 SSKRGK 491
>gi|212276108|ref|NP_001130765.1| hypothetical protein [Zea mays]
gi|194690058|gb|ACF79113.1| unknown [Zea mays]
gi|413942792|gb|AFW75441.1| hypothetical protein ZEAMMB73_593209 [Zea mays]
Length = 226
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 172/248 (69%), Gaps = 23/248 (9%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MDFSTI+ KM+ KDGT Y NVREI +DVRL+F NAMKYND+++ +H+MAKSLLEKFEEKW
Sbjct: 1 MDFSTIQKKMERKDGTCYTNVREICSDVRLIFANAMKYNDDQNVIHLMAKSLLEKFEEKW 60
Query: 206 LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
L LPKV EEKRQ+EEE+K ++E AK+ ELN+++ +LE LR+ V+
Sbjct: 61 LHFLPKVESEEKRQKEEESKGVAATNTSREVAIVKLAKDTDDELNQINKKLEELRKMVVH 120
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWR 325
+CRKM+T+EK+ LG + LSP+DL KALEIVA++NPSF A+EVDLDMDAQSE TLWR
Sbjct: 121 RCRKMTTDEKRKLGAGICHLSPDDLSKALEIVAQDNPSFQTKAEEVDLDMDAQSETTLWR 180
Query: 326 LKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALAKPA 384
LK FV+E+L + A+ +SG M N KRK+EIC+ALAK
Sbjct: 181 LKFFVREALERQANVASGKMD----------------------ENAKRKREICNALAKTT 218
Query: 385 VKRTKKLP 392
+R KK P
Sbjct: 219 SRRIKKQP 226
>gi|168062324|ref|XP_001783131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665381|gb|EDQ52068.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 257
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/237 (50%), Positives = 159/237 (67%), Gaps = 18/237 (7%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQ +I RQI+ HKWAWPFM PVDV+GLGLHDYYEVIEKPMD TIKNKMD KD +GY++
Sbjct: 2 RQVLSILRQISSHKWAWPFMKPVDVKGLGLHDYYEVIEKPMDLGTIKNKMDAKDASGYQH 61
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
V+E+Y DVRLVF NAMKYN E DV+VM+K+L EKFEEKW K + E K EE +
Sbjct: 62 VQEVYQDVRLVFSNAMKYNPEGSDVYVMSKTLSEKFEEKW-----KTLVEPKLHEEVDIF 116
Query: 226 AQL---DMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTA 281
+ + D+ + L E+D QLE+L++ K R MS EE+++LG +
Sbjct: 117 SGIVDHDLHFLMASTFF---------LEELDKQLEDLKQQATPKLSRAMSVEERRHLGQS 167
Query: 282 LTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAAS 338
L RL P++L ++I+A+ NPSF+ + EV++D+DAQ TLWRL+ +VQ L +
Sbjct: 168 LGRLPPDNLSHVIQIIAQKNPSFNMNSDEVEVDIDAQDPATLWRLQRYVQAVLSGSG 224
>gi|302794995|ref|XP_002979261.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
gi|300153029|gb|EFJ19669.1| hypothetical protein SELMODRAFT_418860 [Selaginella moellendorffii]
Length = 700
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 213/375 (56%), Gaps = 54/375 (14%)
Query: 2 EPMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDD-------ILQKVTQLEQKLNDVEQFY 54
E M G+ + G G A D V G + D + +VT++ K+ D+E+
Sbjct: 64 EAMEGVEE--GKAGESPAVNDRSRVPGSQQASPDKDEFKRNLKVQVTEMNSKVEDMER-- 119
Query: 55 LTKDNNQPNTSKSISIAKEKLKDR-------------HVASIEKQQQ-DAFHREEAAGRR 100
S + + + LKDR VA+I+KQ+ + RE +R
Sbjct: 120 --------QVSDILRMRRASLKDRPVGITVTDDDREKAVAAIKKQRALENARREALHTKR 171
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
Q+ R F+ I RQ+TQHKWAWPFM PVDVEGL LHDYY+VI++PMDF TI+ KM+ KDG
Sbjct: 172 AQDHLRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEAKDG 231
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEEKRQ 219
+GYR+V+EI DVRLVF NAM YN+ DV+VMAK+L EKFEEK+ L PK++EE ++
Sbjct: 232 SGYRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEEGAKR 291
Query: 220 EEEEAKAQLDMQLTQEAVQTNK----AKELRSELNEVDMQLENLR--------------- 260
++E + ++ +A + A E+ +LN ++ +LE ++
Sbjct: 292 KQEMVELEVHEGEEAKAAEEVALDRMAHEICKKLNNLEDELEEIKINATSKYRQMLDGFS 351
Query: 261 -ETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQS 319
+ ++ CR MS EEK+ LG +L RL P L + ++I+A+NNPSF+A EV++D+DA
Sbjct: 352 SYSYLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVDIDALD 411
Query: 320 ELTLWRLKVFVQESL 334
TLW+L +VQ L
Sbjct: 412 TGTLWQLHCYVQMVL 426
>gi|167999165|ref|XP_001752288.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696683|gb|EDQ83021.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 260
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 174/262 (66%), Gaps = 14/262 (5%)
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
QI+QHKWAWPFM PVDV+GLGLHDYY+VIEKPMD TIKNK+D KDG GY++V+E+ DV
Sbjct: 1 QISQHKWAWPFMKPVDVKGLGLHDYYDVIEKPMDLGTIKNKLDVKDGLGYQHVQEVCDDV 60
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEKR-QEEEEAKAQLDMQ 231
RLVF NAM YN E DV+VM+K+L +KFEEKW L+ PK+ EE KR ++ E +A
Sbjct: 61 RLVFSNAMTYNPEGSDVYVMSKTLSDKFEEKWKTLIEPKLQEELKRSHDDSEVQANEGGV 120
Query: 232 LTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-----MSTEEKKNLGTALTRLS 286
E + T K E + + + L+ ++ + KCRK MS EEK++LG +L RL
Sbjct: 121 PVVEEIDTEKVIEQYA----LQVSLDCSQDCALSKCRKIMTRAMSVEEKRHLGQSLGRLP 176
Query: 287 PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK-AASRSSGDMG 345
P++L ++I+A+ NPSF+ + EV++D+DAQ TLWRL+ +VQ L +A+R +
Sbjct: 177 PDNLSHVIQIIAQKNPSFNINSDEVEVDIDAQDPATLWRLQRYVQAVLSGSAARQATPRS 236
Query: 346 GNNNNNNDDNNNEKDNSNKKNK 367
N ++ K NS+K++K
Sbjct: 237 QATKRNG--SSLLKKNSSKRSK 256
>gi|302813758|ref|XP_002988564.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
gi|300143671|gb|EFJ10360.1| hypothetical protein SELMODRAFT_159527 [Selaginella moellendorffii]
Length = 293
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/302 (42%), Positives = 187/302 (61%), Gaps = 36/302 (11%)
Query: 39 KVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAG 98
KV +E++++D+ + ++P I++ + +++ VA+I+KQ+ R EA
Sbjct: 4 KVEDMERQVSDILRMRRASLKDRP---VGITVTDDD-REKAVAAIKKQRALENARREALH 59
Query: 99 -RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
+R Q+ R F+ I RQ+TQHKWAWPFM PVDVEGL LHDYY+VI++PMDF TI+ KM+
Sbjct: 60 MKRAQDHLRIFSNILRQVTQHKWAWPFMQPVDVEGLQLHDYYDVIKRPMDFRTIREKMEA 119
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEE 216
KDG+GYR+V+EI DVRLVF NAM YN+ DV+VMAK+L EKFEEK+ L PK++EE
Sbjct: 120 KDGSGYRSVQEIAEDVRLVFSNAMTYNEVGTDVYVMAKTLSEKFEEKYKFVLEPKLLEER 179
Query: 217 KRQEEEEAKAQLDMQLTQEAVQTNKAKEL------RSELNEVDMQLENLRETVIQK---- 266
K +L LT+ A + + RS+LN ++ +LE ++ + K
Sbjct: 180 --------KLRLIGWLTRSAKRYTSCEARVPSHLERSQLNNLEDELEEIKISATSKYRQM 231
Query: 267 ------------CRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLD 314
CR MS EEK+ LG +L RL P L + ++I+A+NNPSF+A EV++D
Sbjct: 232 LDGFSSYSYLRVCRPMSIEEKRQLGQSLGRLPPTGLNRVIQIIAKNNPSFNAAVAEVEVD 291
Query: 315 MD 316
+D
Sbjct: 292 ID 293
>gi|168003377|ref|XP_001754389.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694491|gb|EDQ80839.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 694
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 128/248 (51%), Gaps = 9/248 (3%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E A G+RM E+ +Q + R++ HK W F PVD E LGLHDY+ +I+KPMD TIK
Sbjct: 241 EAARGKRMGEMLKQCMTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKK 300
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
K+ K Y + E D+RL F NAM YN DV+VMA+ L FEE W + KV
Sbjct: 301 KLHLKQ---YASPLEFGEDIRLTFSNAMTYNPVGHDVYVMAELLKNMFEEWWKNMGRKVE 357
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAKE-----LRSELNEVDMQLENLRETVIQKCR 268
EE +R +EE D +E+ + + + R + + R + K R
Sbjct: 358 EERRRCGKEEEMLANDEDSVEESGEVRRGERDVVSLTRGKASSRMGSQPKPRPEEVGK-R 416
Query: 269 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 328
M+ EEK+ L L RL + L + ++I+ + NP E+++D+D+ TLW L
Sbjct: 417 AMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDIDSFDNDTLWELDR 476
Query: 329 FVQESLKA 336
FV +K+
Sbjct: 477 FVTNYMKS 484
>gi|413947734|gb|AFW80383.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
gi|413947735|gb|AFW80384.1| hypothetical protein ZEAMMB73_461985 [Zea mays]
Length = 490
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/243 (35%), Positives = 122/243 (50%), Gaps = 37/243 (15%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ +++ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ YR+ RE
Sbjct: 134 SALLQRLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQ---YRSPRE 190
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F+NAM YN + DVH MA+ LL FEEKWL++ E AQL
Sbjct: 191 FAGDVRLTFRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEI-------------EAELAQL 237
Query: 229 DMQ-LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC------- 267
Q T + K KE+ RS+ E + N R V +K
Sbjct: 238 SPQPPTPSSAAPRKPKEIDNSRALERSDSTVHAAGMEATPKTHNGRPPVSKKPKAREPNK 297
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ EK+ L L L PE L ++I+ + N S + E+++D+D+ TLW L
Sbjct: 298 RDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELD 357
Query: 328 VFV 330
FV
Sbjct: 358 RFV 360
>gi|115466274|ref|NP_001056736.1| Os06g0138000 [Oryza sativa Japonica Group]
gi|113594776|dbj|BAF18650.1| Os06g0138000, partial [Oryza sativa Japonica Group]
Length = 124
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 95/145 (65%), Gaps = 23/145 (15%)
Query: 249 LNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 308
L E++ QLE LR+ V+QKCRKM+T EK+ LG L LSPE+L KALE+VA++NPSF A
Sbjct: 1 LIEINKQLEELRQMVVQKCRKMTTYEKRKLGAGLCHLSPEELTKALEMVAQDNPSFEAKG 60
Query: 309 QEVDLDMDAQSELTLWRLKVFVQESL-KAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNK 367
E++LDMDAQSE TLWRLK FV+E+L + A+ +SG +
Sbjct: 61 DELELDMDAQSETTLWRLKFFVREALERQANVASG----------------------RTD 98
Query: 368 NNPKRKKEICDALAKPAVKRTKKLP 392
N KRK+EIC+ALA+ A KR K+ P
Sbjct: 99 ENAKRKREICNALARTASKRVKQQP 123
>gi|168024468|ref|XP_001764758.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684052|gb|EDQ70457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 317
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 33/265 (12%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E A G+R+ ++ +Q + R++ HK W F PVD E LGLHDY+ +I+KPMD TIK
Sbjct: 67 EAARGKRVADMLKQCTTLLRKLMTHKHGWVFNEPVDAEKLGLHDYHSIIKKPMDLGTIKK 126
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK-- 211
K+ GK GY + E D+RL F NAM YN DV+VMA+ L FEE W + K
Sbjct: 127 KLHGK---GYPSPVEFAEDIRLTFANAMTYNPVGHDVYVMAELLKSIFEEWWKNMSRKME 183
Query: 212 ------------VMEEEKRQEE--EEAKAQLDM-QLTQEAVQTNKAKELRSELNEVDMQL 256
++ +E EE E + + D+ LT+ + A + + +EV
Sbjct: 184 EEKRRAEKEEEMLLNDEDSVEETGEVRRGERDLSSLTRGKTSSRMASQPKPRPDEVGK-- 241
Query: 257 ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMD 316
R M+ EEK+ L L RL + L + ++I+ + NP E+++D+D
Sbjct: 242 -----------RAMTFEEKRKLSVNLERLPGDKLERIVQIIKKRNPDLGQNEDEIEVDID 290
Query: 317 AQSELTLWRLKVFVQESLKAASRSS 341
+ TLW L FV +K+ + +
Sbjct: 291 SFDNDTLWELDRFVTNYMKSRGKKA 315
>gi|226495673|ref|NP_001142282.1| uncharacterized protein LOC100274451 [Zea mays]
gi|194707994|gb|ACF88081.1| unknown [Zea mays]
Length = 350
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 120/244 (49%), Gaps = 37/244 (15%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+HK +W F PVD LGLHDY+ +I KPMD T+K+K+ YR+ RE DVRL
Sbjct: 2 KHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSKLAAGQ---YRSPREFAGDVRLT 58
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ-LTQE 235
F+NAM YN + DVH MA+ LL FEEKWL++ E AQL Q T
Sbjct: 59 FRNAMTYNPKGQDVHFMAEQLLNMFEEKWLEI-------------EAELAQLSPQPPTPS 105
Query: 236 AVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC-------RKMSTEEK 275
+ K KE+ RS+ E + N R V +K R M+ EK
Sbjct: 106 SAAPRKPKEIDNSRALERSDSTVHAAGMEATPKTHNGRPPVSKKPKAREPNKRDMTFWEK 165
Query: 276 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+ L L L PE L ++I+ + N S + E+++D+D+ TLW L FV K
Sbjct: 166 QRLSNNLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELDRFVTNYRK 225
Query: 336 AASR 339
+ ++
Sbjct: 226 SITK 229
>gi|414875721|tpg|DAA52852.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 490
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/246 (35%), Positives = 122/246 (49%), Gaps = 41/246 (16%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVR 167
AA+ ++ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ G G Y++ R
Sbjct: 132 AALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL----GAGQYKSPR 187
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQ 227
E DVRL F+NAM YN + DVH MA+ LL FEEKW ++ E AQ
Sbjct: 188 EFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEIAQ 234
Query: 228 LDMQ---LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC---- 267
L Q + A + K KE+ RS+ E + R V++K
Sbjct: 235 LSPQPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKARE 294
Query: 268 ---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
R M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW
Sbjct: 295 PNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLW 354
Query: 325 RLKVFV 330
L FV
Sbjct: 355 ELDRFV 360
>gi|302143389|emb|CBI21950.3| unnamed protein product [Vitis vinifera]
Length = 612
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 126/259 (48%), Gaps = 29/259 (11%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E G M + + A+ ++ +HK W F PVDV+GLGLHDY+ +I PMD T+K+
Sbjct: 276 EPGYGSAMNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKS 335
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
++ + Y++ RE DVRL F NAM YN + DVHVMA+ L + FE+KW +
Sbjct: 336 RL---NKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVI----- 387
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC------ 267
E E+ A M + E + E S VD +++ + T + +
Sbjct: 388 ------EAEKLPAPPPMLPSHEMRRVLDRSE--SMTYAVDPKIKPMNYTPLVRTPSLKKP 439
Query: 268 -------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSE 320
R M+ EEK+ L T L L E L + I+ NN + E+++D+D+
Sbjct: 440 KAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDA 499
Query: 321 LTLWRLKVFVQESLKAASR 339
TLW L +V K+ S+
Sbjct: 500 ETLWELDRYVTNYKKSLSK 518
>gi|242055997|ref|XP_002457144.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
gi|241929119|gb|EES02264.1| hypothetical protein SORBIDRAFT_03g001920 [Sorghum bicolor]
Length = 482
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 125/255 (49%), Gaps = 46/255 (18%)
Query: 105 KRQFAAIFR-------QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
++ +A +F+ ++ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+
Sbjct: 131 RKLYAPVFKTCSVLLQRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL-- 188
Query: 158 KDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
G G Y++ RE DVRL F+NAM YN + DVH MA+ LL FEEKW ++
Sbjct: 189 --GAGQYKSPREFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------- 238
Query: 217 KRQEEEEAKAQLDMQ-LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRET 262
E AQL Q T + K KE+ RS+ E + R
Sbjct: 239 -----EAEVAQLSPQPPTPSSAAPRKPKEIDNSRVLERSDSTVHAAAMEATPKTHTGRPP 293
Query: 263 VIQKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDM 315
V++K R M+ EK+ L L L PE L ++I+ + N S E+++D+
Sbjct: 294 VLKKPKAREPNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDI 353
Query: 316 DAQSELTLWRLKVFV 330
D+ TLW L FV
Sbjct: 354 DSFDVETLWELDRFV 368
>gi|222617974|gb|EEE54106.1| hypothetical protein OsJ_00865 [Oryza sativa Japonica Group]
Length = 508
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 125/255 (49%), Gaps = 37/255 (14%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+ A+ ++ +HK +W F PVD LGLHDY+ +I KPMD T+K+++ Y++
Sbjct: 144 KSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGH---YKS 200
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
RE DVRL F+NAM+YN + DVH MA+ LL FEEKW ++ E
Sbjct: 201 PREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEV 247
Query: 226 AQLDMQ-LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC---- 267
AQL Q T + K KE+ RS+ E + R V++K
Sbjct: 248 AQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKARE 307
Query: 268 ---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
R+M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW
Sbjct: 308 PNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLW 367
Query: 325 RLKVFVQESLKAASR 339
L FV K+ S+
Sbjct: 368 ELDRFVTNYKKSISK 382
>gi|302764766|ref|XP_002965804.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
gi|300166618|gb|EFJ33224.1| hypothetical protein SELMODRAFT_406866 [Selaginella moellendorffii]
Length = 706
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 132/253 (52%), Gaps = 28/253 (11%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+RM ++ +Q + +++ HK AW F PVD LGLHDY++VI +PMD TIK K++G
Sbjct: 108 KRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKKKLEGG 167
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
YR E DV+L F NAM YN DV +MA L + F+E+W + K+
Sbjct: 168 H---YRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL------ 218
Query: 219 QEEEEAKAQLDMQLTQEAVQTNK---AKELRSELNEVDMQLENL-------RETVIQKCR 268
EEE+ K +++ ++ E Q N + L+ L ++ QL +L R + R
Sbjct: 219 -EEEQTKCRVEDEVFAEIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSKKSGKR 277
Query: 269 KMSTEEKKNLGTALTRL---SPEDLCKALEIV---AENNPSFHATAQEVDLDMDAQSELT 322
+M+ EEK LG L ++ +P D KA EIV ++NP+ + +++D+D T
Sbjct: 278 QMTYEEKTELGKNLEKVLEQNPGD--KADEIVLLLKKHNPNLSQSEDTIEVDIDGIDNDT 335
Query: 323 LWRLKVFVQESLK 335
LW L V +K
Sbjct: 336 LWELHKMVASCMK 348
>gi|302823131|ref|XP_002993220.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
gi|300138990|gb|EFJ05740.1| hypothetical protein SELMODRAFT_431331 [Selaginella moellendorffii]
Length = 702
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 28/258 (10%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E A +RM ++ +Q + +++ HK AW F PVD LGLHDY++VI +PMD TIK
Sbjct: 103 ELARMKRMGDIMKQCGTLLKKLITHKHAWVFNEPVDAVKLGLHDYHKVIRRPMDLGTIKK 162
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
K++G YR E DV+L F NAM YN DV +MA L + F+E+W + K+
Sbjct: 163 KLEGGH---YRTPVEFADDVKLTFSNAMTYNPPGHDVFIMADILRQIFDERWRCIKEKL- 218
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNK---AKELRSELNEVDMQLENL-------RETV 263
EEE+ K +++ ++ E Q N + L+ L ++ QL +L R +
Sbjct: 219 ------EEEQTKCRVEDEVFAEIAQGNPNPALQNLKQSLLSIEDQLSSLKKPAGAPRGSK 272
Query: 264 IQKCRKMSTEEKKNLGTALTRL---SPEDLCKALEIV---AENNPSFHATAQEVDLDMDA 317
R+M+ EEK LG L ++ +P D KA EIV ++NP+ + +++D+D
Sbjct: 273 KSGKRQMTYEEKTELGKNLEKVLEQNPGD--KADEIVLLLKKHNPNLSQSEDTIEVDIDG 330
Query: 318 QSELTLWRLKVFVQESLK 335
TLW L V +K
Sbjct: 331 IDNDTLWELHKMVASCMK 348
>gi|303285596|ref|XP_003062088.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226456499|gb|EEH53800.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 476
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 149/276 (53%), Gaps = 19/276 (6%)
Query: 90 AFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 149
AFH AA R+++ + +Q A +Q+ HKW++PF+ PVD LGL +Y++++++PMD
Sbjct: 51 AFH-AVAAKRKLEIVSKQCLASVKQVMSHKWSFPFVKPVDAAALGLENYHDIVKQPMDLG 109
Query: 150 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
T++ ++ G Y E+ DV L F NAM YN + DVHVMA +L + +E +W +
Sbjct: 110 TVRANIE--KGGVYAACEEVNRDVELTFANAMLYNGAQTDVHVMAATLKQFWEPRWAVIQ 167
Query: 210 PKVME-EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELR-----SELNEVDMQLENLRETV 263
KV E +E E+E+ + ++ A QT A+E+R ++L+++ LE+L+ T
Sbjct: 168 EKVAEVDESMTAEKESAEKKSAEM--HARQTLAAEEMRCAGLMADLDQLKRSLEDLKRTS 225
Query: 264 IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP----SFHATAQ--EVDLDMDA 317
++ R M EKK L + +L +A +++AE A A+ E+ D+
Sbjct: 226 VRITRPMDEREKKRLANTMMKLPRRYREEARDVIAETEGEHMVPVEAVARWGEILEDLPR 285
Query: 318 QSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNND 353
S + RL +F + + + A+R G +GG + D
Sbjct: 286 FSAVAHRRLALFAKNTRRNATR--GIIGGGHGVEGD 319
>gi|218187737|gb|EEC70164.1| hypothetical protein OsI_00884 [Oryza sativa Indica Group]
Length = 512
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 133/273 (48%), Gaps = 41/273 (15%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+ A+ ++ +HK +W F PVD LGLHDY+ +I KPMD T+K+++ Y++
Sbjct: 94 KSCGALLARLMKHKHSWVFNTPVDASALGLHDYHTIITKPMDLGTVKSRLAAGH---YKS 150
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
RE DVRL F+NAM+YN + DVH MA+ LL FEEKW ++ +V
Sbjct: 151 PREFAGDVRLTFQNAMRYNPKGQDVHFMAEQLLNMFEEKWPEIEAEV------------- 197
Query: 226 AQLDMQ-LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC---- 267
AQL Q T + K KE+ RS+ E + R V++K
Sbjct: 198 AQLSPQPPTPSSAAPRKPKEIDNSKVLERSDSTVHAAGMEATPKQNTGRPPVLKKPKARE 257
Query: 268 ---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
R+M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW
Sbjct: 258 PNKREMTFWEKQRLSNNLQELPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLW 317
Query: 325 RLKVFVQESLKAAS----RSSGDMGGNNNNNND 353
L FV K+ S ++ + G + N+D
Sbjct: 318 ELDRFVTNYKKSISKNKRKAENPVAGQDEMNHD 350
>gi|449459556|ref|XP_004147512.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
gi|449511376|ref|XP_004163939.1| PREDICTED: transcription factor GTE7-like [Cucumis sativus]
Length = 533
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 131/258 (50%), Gaps = 34/258 (13%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + + I ++ +HK W F PVDV G+GLHDYY+++++PMD ++K K+ GKD Y
Sbjct: 165 LLKACSQILTKLMKHKHGWIFNKPVDVVGMGLHDYYDIVKRPMDLGSVKVKL-GKD--AY 221
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR----Q 219
+ + +DVRL FKNAM YN + DVH MA+ LL +FEE + + + EE++R Q
Sbjct: 222 ESPYDFASDVRLTFKNAMTYNPKGHDVHAMAEQLLVRFEELFRPVAEALEEEDRRFCGYQ 281
Query: 220 EEEEAK----AQLDMQLTQEAVQ------TNKAKELRSELNEVDMQ-----LENLRETVI 264
EE A ++ + + ++ +Q T K S N MQ LR +
Sbjct: 282 EELPASSWNHSEAERTVKKDNIQKQVVKKTEPMKAPSSSSNPPMMQSPVKTPSPLRAPPV 341
Query: 265 QKC------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 312
+ R+M+ EEK LG L L PE + + ++I+ + N E++
Sbjct: 342 KPLKQPKPRAKDPNKREMTLEEKHKLGIGLQSLPPEKMEQVVQIIKKRNGHLKQDGDEIE 401
Query: 313 LDMDAQSELTLWRLKVFV 330
LD++A TLW L V
Sbjct: 402 LDIEAVDTETLWELDRLV 419
>gi|356542179|ref|XP_003539547.1| PREDICTED: uncharacterized protein LOC100781720 [Glycine max]
Length = 901
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 132/274 (48%), Gaps = 41/274 (14%)
Query: 92 HREEAAGRRM-QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
H E G M +L + +A+ ++ +HK W F PVDVEGLGLHDY+ +I PMD T
Sbjct: 549 HVEGEMGHGMGSKLLKSCSALLEKLMKHKHGWVFNAPVDVEGLGLHDYFSIITHPMDLGT 608
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+K+++ + Y++ +E DVRL F NAM YN + DVH+MA+ LL FEE+W
Sbjct: 609 VKSRL---NKNWYKSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLLNIFEERW----- 660
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDM-QLENLRETVIQKC-- 267
++E +E + + + + KA R +DM ++ + E++ Q
Sbjct: 661 AIIESNYYRE-----IRYGLDYGAPSPVSRKAPPFRPP--PIDMRRILDRSESMTQPPKI 713
Query: 268 ----------------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH 305
R M+ EEK+ L T L L E L ++I+ + N +
Sbjct: 714 MGITPSSRTPAPKKPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALS 773
Query: 306 ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
E+++D+D+ TLW L FV K+ S+
Sbjct: 774 QHDDEIEVDIDSVDTETLWELDRFVTNYKKSLSK 807
>gi|384247311|gb|EIE20798.1| hypothetical protein COCSUDRAFT_43706 [Coccomyxa subellipsoidea
C-169]
Length = 534
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
+ +Q ++ + I HKWAWPF PVD+ DY V++ PMD +K K++G Y
Sbjct: 89 VSKQCMSVLKSILAHKWAWPFADPVDLARYA--DYLNVVKSPMDLKWVKRKVEGGQ---Y 143
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVMEEEKRQEEE 222
E AD RLVF NA YN DV+VMA +LL +FE+KW ++PK++E E +
Sbjct: 144 ATPAEFAADFRLVFANAHTYNPPGTDVYVMASTLLARFEDKWNSVVVPKLIEAEVASRSD 203
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK-------CRKMSTEEK 275
EA + + E+ + LR E + E L + + C+ MS K
Sbjct: 204 EAAVR---ERLSESANARAGEALRGEAARLKGHFETLEARIAESKSLAAAACQPMSISAK 260
Query: 276 KNLGTALTRLSPEDLCKALEIVAENNP-SFHATAQEVDLDMDAQSELTLWRLKVFVQESL 334
+ L + RLS E +A+ I+ P + + +E++LD+ LTL +L+ F L
Sbjct: 261 RQLLEQMARLSGEQYEQAIAIILARYPGAANNVGEELNLDLSVADALTLRQLQHFCHVCL 320
Query: 335 KAA 337
A
Sbjct: 321 HPA 323
>gi|225446551|ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 654
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 36/273 (13%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E G M + + A+ ++ +HK W F PVDV+GLGLHDY+ +I PMD T+K+
Sbjct: 297 EPGYGSAMNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKS 356
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
++ + Y++ RE DVRL F NAM YN + DVHVMA+ L + FE+KW V+
Sbjct: 357 RL---NKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKWA-----VI 408
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAK-------ELRSELNE-------VDMQLENL 259
E E +E + +M L + A E+R L+ VD +++ +
Sbjct: 409 EAEYSRELRLG-YEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPM 467
Query: 260 RETVIQKC-------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHA 306
T + + R M+ EEK+ L T L L E L + I+ NN +
Sbjct: 468 NYTPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQ 527
Query: 307 TAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
E+++D+D+ TLW L +V K+ S+
Sbjct: 528 DNDEIEVDIDSVDAETLWELDRYVTNYKKSLSK 560
>gi|147820894|emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
Length = 660
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 36/273 (13%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
E G M + + A+ ++ +HK W F PVDV+GLGLHDY+ +I PMD T+K+
Sbjct: 297 EPGYGSAMNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKS 356
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
++ + Y++ RE DVRL F NAM YN + DVHVMA+ L + FE+KW V+
Sbjct: 357 RL---NKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVLSKIFEDKW-----AVI 408
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAK-------ELRSELNE-------VDMQLENL 259
E E +E + +M L + A E+R L+ VD +++ +
Sbjct: 409 EAEYSRELRLG-YEYEMGLPTPTSRKLPAPPPMLPSHEMRRVLDRSESMTYAVDPKIKPM 467
Query: 260 RETVIQKC-------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHA 306
T + + R M+ EEK+ L T L L E L + I+ NN +
Sbjct: 468 NYTPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQ 527
Query: 307 TAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
E+++D+D+ TLW L +V K+ S+
Sbjct: 528 DNDEIEVDIDSVDAETLWELDRYVTNYKKSLSK 560
>gi|225461616|ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
Length = 597
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 165/356 (46%), Gaps = 49/356 (13%)
Query: 7 LNQDLGNVGLGKAE---GDTVEVEGLNKTIDDILQK--VTQLEQKLNDVEQFYLTKDNNQ 61
+N ++G+VG+ + G +V V G + I + ++K T K F L KD
Sbjct: 174 VNSEVGSVGVQDSRPFRGLSVSVMGNSHGIGEFVEKEKRTPKANKYYQNPDFVLGKDKLP 233
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA 121
P S +K K V I+K AF + + + ++ +HK
Sbjct: 234 PPESN------KKPKSNGVG-IDKYVAQAF--------------KNCSNLLAKLMKHKHG 272
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
W F +PVDV+GLGLHDYY +I+ PMDF T+K+++ Y++ RE DVRL +NAM
Sbjct: 273 WVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRL---SKNWYKSPREFAEDVRLTLQNAM 329
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNK 241
YN + DVH MA+ LL+ FEEKW + + + +A + +
Sbjct: 330 TYNPKGQDVHCMAEELLKIFEEKWAAIEADLY--WRFGMGHDAGTPTPTSRKAPYLHHHH 387
Query: 242 AKELR------SELNEVDMQLE-----NLRETVIQKC-------RKMSTEEKKNLGTALT 283
+ E+R S +D L+ ++R V +K R M+ EEK+ L + L
Sbjct: 388 SPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVPKKPKAKDPHKRDMTYEEKQKLSSNLQ 447
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L E L ++I+ + N + E+++D+D+ TLW L +V K+ S+
Sbjct: 448 SLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDSVDAETLWELDRYVTNYKKSLSK 503
>gi|414875719|tpg|DAA52850.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
gi|414875720|tpg|DAA52851.1| TPA: hypothetical protein ZEAMMB73_954621 [Zea mays]
Length = 948
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 41/255 (16%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVR 167
AA+ ++ +HK +W F PVD LGLHDY+ +I KPMD T+K+K+ G G Y++ R
Sbjct: 132 AALLSRLMKHKHSWVFNKPVDASALGLHDYHTIITKPMDLGTVKSKL----GAGQYKSPR 187
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQ 227
E DVRL F+NAM YN + DVH MA+ LL FEEKW ++ E AQ
Sbjct: 188 EFAGDVRLTFQNAMTYNPKGQDVHFMAEQLLNMFEEKWPEI-------------EAEIAQ 234
Query: 228 LDMQ---LTQEAVQTNKAKEL-------RSELN------EVDMQLENLRETVIQKC---- 267
L Q + A + K KE+ RS+ E + R V++K
Sbjct: 235 LSPQPPTPSSAAPKKPKPKEIDNSRPLERSDSTVHAAGIEATPKTHTGRPQVLKKPKARE 294
Query: 268 ---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLW 324
R M+ EK+ L L L PE L ++I+ + N S E+++D+D+ TLW
Sbjct: 295 PNKRDMTFWEKQRLSNNLQDLPPEKLDNVVQIIKKRNLSLSQHDDEIEVDIDSFDVETLW 354
Query: 325 RLKVFVQESLKAASR 339
L FV K+ ++
Sbjct: 355 ELDRFVTNYRKSITK 369
>gi|440790084|gb|ELR11372.1| Bromodomain containing protein [Acanthamoeba castellanii str. Neff]
Length = 844
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 118/235 (50%), Gaps = 27/235 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q + + + HK+ WPF PVD L + DY++VI+ PMD TIK ++D Y
Sbjct: 142 KQCQVLLKTLMTHKFGWPFNQPVDPIALNIPDYFDVIKHPMDLGTIKEQLDSGS---YET 198
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
E DVRLVF N YN D+ VMA +L F EK+ ++L +EE R E +
Sbjct: 199 EEEFAEDVRLVFTNTFTYNQPGSDIVVMASTLSSLFNEKF-EILKAKIEERGRDAPEGVE 257
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRET---------VIQKCRKMSTEEKK 276
L KELR ++ V +LE +++T + R M+ EEKK
Sbjct: 258 ETL--------------KELRDSMSSVQRELERIKKTPNGRAGRAGAAEDQRPMTFEEKK 303
Query: 277 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
L A+ L ++L ++I+ E P ++ +E+++D+DA + TL L+ +V+
Sbjct: 304 KLSHAINNLPSDNLGMVVKIIHERMPQLTSSGEEIEIDIDALNPATLRHLERYVR 358
>gi|255568313|ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223535590|gb|EEF37258.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 742
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 127/258 (49%), Gaps = 38/258 (14%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK+ W F PVDV+GLGLHDY+ +I+ PMD T+K ++ + Y++ E
Sbjct: 404 SALLEKLMKHKYGWVFKSPVDVKGLGLHDYFTIIKHPMDLGTVKTRL---NKNWYKSPEE 460
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F NAM+YN + DVHVMA+ LL+ FE++W+ + K + + E + +
Sbjct: 461 FAEDVRLTFHNAMRYNPKGQDVHVMAEILLKLFEDRWVVI--------KSEFDREMRFVV 512
Query: 229 DMQLTQEAVQTNKAK------ELRSELNEVD---MQLENLRETVIQKC------------ 267
+ + KA ++R L+ D Q + R I
Sbjct: 513 GCGIGIPTPTSRKAPLPPPPLDMRRILDRSDSMRYQPIDPRSKPISTTPSGRTPAPKKPK 572
Query: 268 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
R M+ +EK+ L T L L E L ++I+ + N S E+++D+D+
Sbjct: 573 AKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRNSSLSQHDDEIEVDIDSVDAE 632
Query: 322 TLWRLKVFVQESLKAASR 339
TLW L FV K+ S+
Sbjct: 633 TLWELDRFVTNYKKSLSK 650
>gi|449444709|ref|XP_004140116.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449516325|ref|XP_004165197.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 667
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 129/258 (50%), Gaps = 38/258 (14%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVDV+GLGLHDYY +I+ PMD T+K+++ + Y++ +E
Sbjct: 334 SSLLEKLIKHKYGWVFDAPVDVQGLGLHDYYTIIKHPMDLGTVKSRL---NKNWYKSPKE 390
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F+NAM YN + DV+VMA LL FE++W+ ++E + + E + L
Sbjct: 391 FAEDVRLTFRNAMTYNPKGQDVYVMADQLLSIFEDRWV-----IIEADYNR---EMRFGL 442
Query: 229 DMQLTQEAVQTNKAKEL------------RSELNEVDMQLEN--LRETVIQKC------- 267
D + KA+ RSE + +N L T +
Sbjct: 443 DYGAALSTPTSRKARLPPPPPLDMKRILERSESTTYRLDSKNRPLSATPSSRTPAPKKPK 502
Query: 268 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
R M+ EEK+ L + L L E L L+I+ + N + +E+++D+D+
Sbjct: 503 AKDPHKRDMTYEEKQKLSSNLQNLPSEKLDAILQIIKKRNSNIFQDDEEIEVDIDSVDAE 562
Query: 322 TLWRLKVFVQESLKAASR 339
TLW L FV K+ S+
Sbjct: 563 TLWELDRFVTNYKKSLSK 580
>gi|356546972|ref|XP_003541893.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 640
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 40/261 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + +++ ++ +HK W F PVDVEGLGLHDY+ +I PMD T+K+++ + Y
Sbjct: 301 LLKSCSSLLEKLMKHKHGWVFDTPVDVEGLGLHDYFSIITHPMDLGTVKSRL---NKNWY 357
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
R+ +E DVRL F NAM YN + DVH+MA+ L FEE+W ++E +E
Sbjct: 358 RSPKEFAEDVRLTFHNAMTYNPKGQDVHIMAEQLSNIFEERWA-----IIESNYNRE--- 409
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDM-QLENLRETVIQKC--------------- 267
+ + + KA R +DM ++ + E++ Q
Sbjct: 410 --MTYGLDYGAPSPVSRKAPPFRPP--PIDMRRILDRSESMTQPPKIMGITPSSRTPAPK 465
Query: 268 ---------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 318
R M+ EEK+ L T L L E L ++I+ + N + E+++D+D+
Sbjct: 466 KPKAKDPHKRDMTYEEKQKLSTHLQSLPSEKLDAIVQIIKKRNSALSQHDDEIEVDIDSV 525
Query: 319 SELTLWRLKVFVQESLKAASR 339
TLW L FV K+ S+
Sbjct: 526 DTETLWELDRFVTNYKKSLSK 546
>gi|145347731|ref|XP_001418315.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578544|gb|ABO96608.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 610
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 143/280 (51%), Gaps = 29/280 (10%)
Query: 63 NTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQEL-KRQFAAIFRQITQHKWA 121
+ S+ +S ++KL + + QQ F+ R + E+ +Q + RQ+ HKW
Sbjct: 248 SVSRGVSAIRQKL------ACKPDQQHGFNTLRY--RCLLEIVHKQCLSAVRQLMAHKWG 299
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
+PF PVD + LGL Y E+I +PMD TIK ++ +G Y E+ ADVRL F NAM
Sbjct: 300 FPFSAPVDPDALGLPTYREIITEPMDLGTIKKLIE--NGGKYVMAEEVDADVRLTFANAM 357
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQ-EAVQ-- 238
K+N+E DVH MA LL+++E KW + ++ + E E DM + + EA Q
Sbjct: 358 KFNNEGTDVHTMACGLLDEWEPKWEAIKQRIADVEACVLVER-----DMAVAKNEAAQRR 412
Query: 239 ---TNKAKEL---RSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDL-C 291
+K KE L+ V MQL + V+ R + E++ +L + L R PE L
Sbjct: 413 ADVVSKEKECAKASEALDLVSMQLREVETQVLALMRPLQREDRLDLASDL-RCLPESLRS 471
Query: 292 KALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
A +I+A N + A A D+ DA +E+TL L + +
Sbjct: 472 GAKDIIAANTTGWSAQAHLEDI--DAHNEITLHLLARYTK 509
>gi|302142921|emb|CBI20216.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 125/247 (50%), Gaps = 23/247 (9%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +HK W F +PVDV+GLGLHDYY +I+ PMDF T+K+++ Y++ RE
Sbjct: 132 LLAKLMKHKHGWVFNNPVDVKGLGLHDYYSIIKHPMDFGTVKSRL---SKNWYKSPREFA 188
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
DVRL +NAM YN + DVH MA+ LL+ FEEKW + + + +A
Sbjct: 189 EDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEEKWAAIEADLY--WRFGMGHDAGTPTPT 246
Query: 231 QLTQEAVQTNKAKELR------SELNEVDMQLE-----NLRETVIQKC-------RKMST 272
+ + + E+R S +D L+ ++R V +K R M+
Sbjct: 247 SRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNLKPGNFAHMRMPVPKKPKAKDPHKRDMTY 306
Query: 273 EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQE 332
EEK+ L + L L E L ++I+ + N + E+++D+D+ TLW L +V
Sbjct: 307 EEKQKLSSNLQSLPSEKLDHIVQIIKKRNSAVSQQDDEIEVDIDSVDAETLWELDRYVTN 366
Query: 333 SLKAASR 339
K+ S+
Sbjct: 367 YKKSLSK 373
>gi|356545057|ref|XP_003540962.1| PREDICTED: transcription factor GTE4-like [Glycine max]
Length = 874
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 20/248 (8%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK W F PVDVE LGLHDY+ +I PMD T+K+++ + Y++ +E
Sbjct: 536 SSLLEKLMKHKHGWVFNAPVDVEALGLHDYFTIITHPMDLGTVKSRL---NKNWYKSPKE 592
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F+NAM YN DVH+MA+ L + FE++W + E + + A A
Sbjct: 593 FAEDVRLTFRNAMTYNPPGQDVHIMAEQLSKIFEDRWAIIESDYNREMRYGFDYGAVAPA 652
Query: 229 DMQLTQE-AVQTNKAKELRSELNEVDMQLENLRETVIQKC----------------RKMS 271
L++ + T ++R LN + + R I R M+
Sbjct: 653 LSPLSRRVSAFTPPPLDMRRILNRSESMTQTPRLMSITPSSRTPAPKKPKAKDPHKRDMT 712
Query: 272 TEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
EEK+ L T L L E L ++I+ + N + + E+++D+D+ TLW L FV
Sbjct: 713 FEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRFVT 772
Query: 332 ESLKAASR 339
K+ S+
Sbjct: 773 NYKKSLSK 780
>gi|356515098|ref|XP_003526238.1| PREDICTED: uncharacterized protein LOC100780669 [Glycine max]
Length = 971
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 122/248 (49%), Gaps = 20/248 (8%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK W F PVDVE LGLHDY+ +I PMD T+K ++ + Y++ +E
Sbjct: 633 SSLLEKLMRHKHGWVFNSPVDVETLGLHDYFTIITHPMDLGTVKTRL---NKNWYKSPKE 689
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F+NAM YN + DVH+MA+ L + FE++W + E + + A
Sbjct: 690 FAEDVRLTFRNAMTYNPQGQDVHIMAELLSKIFEDRWAIIESDYNREMRYGFDYRAAPPA 749
Query: 229 DMQLTQE-AVQTNKAKELRSELNEVDMQLENLRETVIQKC----------------RKMS 271
L++ + T ++R L+ D + R I R M+
Sbjct: 750 PSPLSRRVSAFTPPPLDMRRILDRSDSMTQTPRLMSITPSSRTPAPKKPKAKDPHKRDMT 809
Query: 272 TEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
EEK+ L T L L E L ++I+ + N + + E+++D+D+ TLW L FV
Sbjct: 810 FEEKQKLSTNLQSLPSEKLDAIVQIIKKRNSALNQHDDEIEVDIDSVDAETLWELDRFVT 869
Query: 332 ESLKAASR 339
K+ S+
Sbjct: 870 NYKKSLSK 877
>gi|357127683|ref|XP_003565508.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 494
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 46/256 (17%)
Query: 105 KRQFAAIFR-------QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
++ +A +F+ ++ +HK W F PVD LGLHDY+ +I KPMD T+K+++
Sbjct: 120 RKLYAPVFKSCGLLLTRLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRL-- 177
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
+G Y++ RE +VRL F+NAMKYN + DV+ MA+ LL FEEKW +
Sbjct: 178 AEGH-YKSPREFATEVRLTFQNAMKYNPKGQDVYFMAEQLLNMFEEKWPDI--------- 227
Query: 218 RQEEEEAKAQLDMQL-TQEAVQTNKAKEL-------RSELNEVDMQLENL--------RE 261
E AQL Q T + K +E+ RS+ LE R
Sbjct: 228 ----EAEIAQLSPQPPTPSSAAPKKPREIDNGRVLERSDSTAHAAGLEATPKPHPGTGRP 283
Query: 262 TVIQKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLD 314
V++K R+M+ EK+ L L L PE L ++I+ + N S + E+++D
Sbjct: 284 PVLKKPKAREPNKREMTFWEKQKLSNDLQDLPPEKLDNVVQIIKKRNSSLNQHDDEIEVD 343
Query: 315 MDAQSELTLWRLKVFV 330
+D+ TLW L FV
Sbjct: 344 IDSFDVETLWELDRFV 359
>gi|47210026|emb|CAF90901.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1594
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 30/259 (11%)
Query: 102 QELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
QE R A + R++ K +AWPF PVDV LGLHDYY++I+ PMD STIK KMD +
Sbjct: 742 QEQLRFCARLVREMLSRKHASYAWPFYKPVDVTSLGLHDYYDIIKHPMDLSTIKKKMDSR 801
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
YR+ +E ADVRL+F N KYN DV MA++L + FE ++ + +P EE
Sbjct: 802 Q---YRDAQEFAADVRLMFSNCYKYNPPDHDVVSMARNLQDVFEMRFAK-MPDDPEEAVP 857
Query: 219 QEEEEA---KAQLDMQLTQEAV-------------QTNKAKELRSELNEVDMQL------ 256
+ A Q+ AV + KE + L ++ Q
Sbjct: 858 VPTPSSALLPAPSTRQVPPPAVSDDSSSSSESECSSADSEKERQQRLAQLQEQTAVVSSP 917
Query: 257 ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEVDLDM 315
+ ++CR MS EEK+ L + +L + L + + I+ PS ++ E+++D
Sbjct: 918 DAFGSVSTERCRPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKSSNPDEIEIDF 977
Query: 316 DAQSELTLWRLKVFVQESL 334
+ TL L+ +V L
Sbjct: 978 ETLKPSTLRELEKYVSSCL 996
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 24/213 (11%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H +AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 455 RQTNQLQYLLKEVLKSLWKHHFAWPFQAPVDAVKLNLPDYYKIIKTPMDMGTIKRRL--- 511
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF---------EEKWLQLL 209
+ Y N +E D +F N YN DD+ +MA++L + F EEK + ++
Sbjct: 512 ENNYYWNAQECIHDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQKITEMPQEEKEIAVV 571
Query: 210 PKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 269
PK +R+ E++ + T A L L + +
Sbjct: 572 PKGRRGVRRESGEDSSSPSTTPHTHSAPAFQGPPTL------------ALAQPQPPRVPP 619
Query: 270 MSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 302
+ +LG L+P+ L + L V + P
Sbjct: 620 TPSSHAPHLGPPYPLLTPDVLAQGLTSVPPSAP 652
>gi|297843426|ref|XP_002889594.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335436|gb|EFH65853.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 767
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 38/251 (15%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGL DYY +IE PMD TIK+ + Y++ RE
Sbjct: 426 SALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSAL---MKNLYKSPRE 482
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F NAM YN E DVH+MA +LL+ FEE+W V+E + +E
Sbjct: 483 FAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG-Y 536
Query: 229 DMQLTQEAVQTNKAKEL-------RSELNEVD---------------MQLENLRETVIQK 266
+M L +++ + R+ ++ D + R ++K
Sbjct: 537 EMNLPTHTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGSTPTSATPSGRTPALKK 596
Query: 267 C-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQS 319
R M+ EEK+ L L L P+ L ++IV + N + +E+++D+D+
Sbjct: 597 PKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVD 656
Query: 320 ELTLWRLKVFV 330
TLW L FV
Sbjct: 657 PETLWELDRFV 667
>gi|15221424|ref|NP_172113.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|30679613|ref|NP_849601.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|334182337|ref|NP_001184922.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|75174943|sp|Q9LNC4.1|GTE4_ARATH RecName: Full=Transcription factor GTE4; AltName:
Full=Bromodomain-containing protein GTE4; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E4
gi|8844128|gb|AAF80220.1|AC025290_9 Contains similarity to a Ring3 protein from Homo sapiens gi|133157
and contains a bromodomain PF|00439. EST gb|F14211 comes
from this gene [Arabidopsis thaliana]
gi|332189843|gb|AEE27964.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189844|gb|AEE27965.1| global transcription factor group E4 [Arabidopsis thaliana]
gi|332189845|gb|AEE27966.1| global transcription factor group E4 [Arabidopsis thaliana]
Length = 766
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 38/251 (15%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGL DYY +IE PMD TIK+ + Y++ RE
Sbjct: 426 SALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSAL---MKNLYKSPRE 482
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F NAM YN E DVH+MA +LL+ FEE+W V+E + +E
Sbjct: 483 FAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERW-----AVIEADYNREMRFVTG-Y 536
Query: 229 DMQLTQEAVQTNKAKEL-------RSELNEVDMQ---------------LENLRETVIQK 266
+M L +++ + R+ ++ D + R ++K
Sbjct: 537 EMNLPTPTMRSRLGPTMPPPPINVRNTIDRADWSNRQPTTTPGRTPTSATPSGRTPALKK 596
Query: 267 C-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQS 319
R M+ EEK+ L L L P+ L ++IV + N + +E+++D+D+
Sbjct: 597 PKANEPNKRDMTYEEKQKLSGHLQNLPPDKLDAIVQIVNKRNTAVKLRDEEIEVDIDSVD 656
Query: 320 ELTLWRLKVFV 330
TLW L FV
Sbjct: 657 PETLWELDRFV 667
>gi|449465695|ref|XP_004150563.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 629
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 123/249 (49%), Gaps = 21/249 (8%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
++ ++ +HK W F PVDVEGL LHDY+ +I PMD T+K ++ + Y++ +E
Sbjct: 306 VSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRL---NKNWYKSPKE 362
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--KA 226
DVRL F+NAM YN + DVH+MA+ LL+ FE++W+ + +E + E A +
Sbjct: 363 FAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWVVIESNYYQEMRLGMEYGAPLPS 422
Query: 227 QLDMQLTQEAVQTNKAKELR---SELNEVDMQLENLRETVIQKC-------------RKM 270
++ V + K LR S +N D + + + T + R M
Sbjct: 423 SNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKPKAKDVFKRDM 482
Query: 271 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
+ EKK L T L L E L L+I+ + N E+++D+D+ TLW L V
Sbjct: 483 TYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDTETLWELDRLV 542
Query: 331 QESLKAASR 339
K+ S+
Sbjct: 543 MNYRKSLSK 551
>gi|326496376|dbj|BAJ94650.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 662
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 117/231 (50%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YR+ +E
Sbjct: 328 SSLLCRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKGQLTRGH---YRDPKE 384
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++
Sbjct: 385 FANDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVDYLASCPPLPKKFPPP 444
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-------RKMSTEEKKNLG 279
+D++L + + L S+ + ++R ++K R M+ +EK+ L
Sbjct: 445 PIDLRLLERSDSLKPHMALDSKSRPISHTPISVRTPSLKKPKAKDLDKRDMTIDEKRKLS 504
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 505 NNLQNLPPEKLDIVVQIIKNKNLSVRQHEDEIEVEIDSMDAETLWELDRFV 555
>gi|326489531|dbj|BAK01746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 122/243 (50%), Gaps = 21/243 (8%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
R A + ++ +HK W F PVD LGLHDY+ +I KPMD T+K+++ Y++
Sbjct: 128 RSCAVVLARLMKHKHGWVFNVPVDASALGLHDYHTIITKPMDLGTVKSRLAAGH---YKS 184
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-------LQLLPKV----ME 214
RE +VRL F+NAM+YN + DV+ MA+ LL FEEKW QL P+
Sbjct: 185 PREFATEVRLTFQNAMRYNPKGQDVYFMAEQLLNMFEEKWPEIEAEIAQLSPQPPTPSSA 244
Query: 215 EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC------- 267
K+Q++ E + + +M + +++ + Q R V++K
Sbjct: 245 PPKKQKQREREREREMDNARALERSDSTAHAAALEAPPKPQAGTARPPVLKKPKARDPNK 304
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+M+ EK+ L L L E L ++I+ + N S + E+++D+D+ TLW L
Sbjct: 305 REMTFWEKQRLSNDLQDLPAEKLDNVVQIIKKRNSSLNQHDDEIEVDIDSFDVETLWELD 364
Query: 328 VFV 330
FV
Sbjct: 365 RFV 367
>gi|449526541|ref|XP_004170272.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE4-like
[Cucumis sativus]
Length = 629
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 123/259 (47%), Gaps = 41/259 (15%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
++ ++ +HK W F PVDVEGL LHDY+ +I PMD T+K ++ + Y++ +E
Sbjct: 306 VSLLEKLMKHKHGWVFNTPVDVEGLCLHDYFSIIRHPMDLGTVKTRL---NKNWYKSPKE 362
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F+NAM YN + DVH+MA+ LL+ FE++W+ V+E QE +L
Sbjct: 363 FAEDVRLTFQNAMTYNPKGQDVHIMAEQLLKIFEDRWV-----VIESNYYQE-----MRL 412
Query: 229 DMQLTQEAVQTNKA------------KELR---SELNEVDMQLENLRETVIQKC------ 267
M+ +N K LR S +N D + + + T +
Sbjct: 413 GMEYGGPLPSSNSVRGHPRPVPLDMRKILRRSDSLINPADSRTQPMSVTPSARTPSLKKP 472
Query: 268 -------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSE 320
R M+ EKK L T L L E L L+I+ + N E+++D+D+
Sbjct: 473 KAKDVFKRDMTYNEKKKLSTNLQNLPSEKLDAILQIIKKRNFELLQQDDEIEVDIDSVDT 532
Query: 321 LTLWRLKVFVQESLKAASR 339
TLW L V K+ S+
Sbjct: 533 ETLWELDRLVMNYRKSLSK 551
>gi|224116690|ref|XP_002317367.1| global transcription factor group [Populus trichocarpa]
gi|222860432|gb|EEE97979.1| global transcription factor group [Populus trichocarpa]
Length = 347
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 42/285 (14%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
HR E R + L ++ + ++ +H++ W F PVDV+ L LHDY+++I+ PMD T+
Sbjct: 64 HRIETLDRFSKYLVKECGELLGKLMKHQYGWVFNVPVDVKMLKLHDYFKIIKHPMDLGTV 123
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K+++ Y++ +E DVRL F NAMKYN++ DVH MA +LL+ FEE W K
Sbjct: 124 KSRL---SKNWYKSPKEFAEDVRLTFNNAMKYNEKGQDVHTMADTLLKIFEENWANF--K 178
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEA------------------------------VQTNK 241
++ E A L ++ A +T
Sbjct: 179 AETNFDKRGEMGYDASLQTPASKRASGPHASSPACGSASACAPSPAPFQQTMPLETRTLG 238
Query: 242 AKELRSELNEVDMQ-LENLRETVIQKCR------KMSTEEKKNLGTALTRLSPEDLCKAL 294
+ +EL +M+ + R +V +K + KM+ EEK+ L +L L E L +
Sbjct: 239 GTDSLTELGHPNMKAADQGRASVSKKPKKDTDKSKMTYEEKQKLSISLQSLPSEKLESVV 298
Query: 295 EIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
+I+ + NP E+++D+D+ TLW L V K+ S+
Sbjct: 299 QIIRKRNPGLFQQEDEIEVDIDSFDNETLWELHSNVTNYRKSISK 343
>gi|357141014|ref|XP_003572045.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 629
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 13/232 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN +E
Sbjct: 288 SSLLSRLMKHKFGWVFNKPVDPVALGLHDYFAIIKHPMDLGTIKAQLTRGQ---YRNPKE 344
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++
Sbjct: 345 FADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIQAEVEYLASCPPLPKKFPPP 404
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVD-MQLENLRETVIQKC-------RKMSTEEKKNL 278
+D++L + + L S+ + ++R ++K R M+ +EK+ L
Sbjct: 405 PIDLRLLERSDSLKHHMALDSKSRPLSHTPTYSVRTPSLKKPKAKDLDKRDMTIDEKRKL 464
Query: 279 GTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 465 SNNLQNLPPEKLDIVVQIIKNKNLSVRQHDDEIEVEIDSMDAETLWELDRFV 516
>gi|296088086|emb|CBI35445.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 43/257 (16%)
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
++ +HK +W F PVDV G+GLHDY+++I++PMD T+K+K+ Y + + ADV
Sbjct: 192 KLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKI---AKNLYDSPLDFAADV 248
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE------------- 220
RL F NA+ YN + DVHVMA+ LL +FE+ + + K+ E+E+ QE
Sbjct: 249 RLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEEDERDQERIIVGELQGSSWN 308
Query: 221 -------------EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC 267
+ AK MQ+ A ++ ++S M+ ++ +
Sbjct: 309 HIPTPERLKKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTPSPMRAPPVKPLATRPS 368
Query: 268 --------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDL 313
R+MS EEK LG L L E + + ++I+++ N E++L
Sbjct: 369 SGKQPKPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQIISKKNGHLTQDGDEIEL 428
Query: 314 DMDAQSELTLWRLKVFV 330
D++A TLW L V
Sbjct: 429 DIEAVDTETLWELDRLV 445
>gi|125581496|gb|EAZ22427.1| hypothetical protein OsJ_06088 [Oryza sativa Japonica Group]
Length = 656
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 15/232 (6%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE
Sbjct: 321 SLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREF 377
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQ 227
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + +
Sbjct: 378 ADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPP 437
Query: 228 LDMQLTQEA-------VQTNKAKELRSELNEVDMQLENL--RETVIQKCRKMSTEEKKNL 278
+D++ + V +K++ L S + ++ + R M+ +EK+ L
Sbjct: 438 IDVRFLDRSDSVKHHMVLDSKSRPL-SHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKL 496
Query: 279 GTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 497 SNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 548
>gi|224146489|ref|XP_002326024.1| global transcription factor group [Populus trichocarpa]
gi|222862899|gb|EEF00406.1| global transcription factor group [Populus trichocarpa]
Length = 393
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +I+ PMD T+K+++ Y++ E
Sbjct: 80 SALLDKLMKHKHGWVFNTPVDVKGLGLHDYFIIIKHPMDLGTVKSRL---TKNWYKSPEE 136
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
DVRL F NAMKYN + DVHVMA+ LL+ FE KW + K + E +
Sbjct: 137 FAEDVRLTFHNAMKYNPKGQDVHVMAEQLLDIFETKWAVI--------KSDYDHEMRFSS 188
Query: 229 DMQLTQEAVQTNKAKELRSELNEVDM-----QLENLRETVIQKC---------------- 267
++ + KA +DM + E++ +I
Sbjct: 189 SYEVGIPTPTSRKAPPFVPP--PLDMWRILDRSESMTYPIIDTPDPNPLPLHLLAKDPNK 246
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ +EK+ L T L L E L ++I+ + + + E+++D+D+ TLW L
Sbjct: 247 RDMTYDEKQKLSTNLQSLPSEKLDNIVQIIKKRSSALSQHDDEIEVDIDSVDVETLWELD 306
Query: 328 VFVQESLKAASR 339
FV K+ S+
Sbjct: 307 RFVTNYKKSLSK 318
>gi|308800642|ref|XP_003075102.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
gi|116061656|emb|CAL52374.1| Vesicle trafficking protein Sly1 (Sec1 family) (ISS) [Ostreococcus
tauri]
Length = 1086
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 126/236 (53%), Gaps = 10/236 (4%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++ + +Q RQ+ HKW +PF PVD + L L Y E+I++PMD T+KN ++ +G
Sbjct: 131 LEVVHKQCLTSVRQLIAHKWGFPFAAPVDPDALDLPTYREIIKEPMDLGTVKNLIE--NG 188
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 220
Y E+ ADVRL F NAMK+N E DVH MAK LL ++E +W + ++ + E
Sbjct: 189 GKYVKAEEVDADVRLTFANAMKFNAEGTDVHAMAKELLVEWETRWATIQQRIADVEACCV 248
Query: 221 -EEEAKAQLDMQLTQEAVQTNKAKELRS---ELNEVDMQLENLRETVIQKCRKMSTEEKK 276
E +A + ++ A +K KE ++ V++QL ++ V+ R + +++
Sbjct: 249 IERKAAEAKNEAASRRADVVSKEKECSKASEAIDLVNIQLGEVQNQVLALMRPLERDDRL 308
Query: 277 NLGTALTRLSPEDL-CKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
NL + L L PE L A EI+A N + A D+DA ++LT+ L + +
Sbjct: 309 NLASELRSL-PEGLRVGAREIIAANTTGWKPAAHLE--DVDAHNDLTIHLLARYTK 361
>gi|297598920|ref|NP_001046443.2| Os02g0250300 [Oryza sativa Japonica Group]
gi|255670765|dbj|BAF08357.2| Os02g0250300 [Oryza sativa Japonica Group]
Length = 600
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 15/232 (6%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE
Sbjct: 321 SLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREF 377
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQ 227
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + +
Sbjct: 378 ADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPP 437
Query: 228 LDMQLTQEA-------VQTNKAKELRSELNEVDMQLENL--RETVIQKCRKMSTEEKKNL 278
+D++ + V +K++ L S + ++ + R M+ +EK+ L
Sbjct: 438 IDVRFLDRSDSVKHHMVLDSKSRPL-SHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKL 496
Query: 279 GTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 497 SNNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 548
>gi|242061170|ref|XP_002451874.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
gi|241931705|gb|EES04850.1| hypothetical protein SORBIDRAFT_04g009060 [Sorghum bicolor]
Length = 654
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E
Sbjct: 365 SSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSHGQ---YRNPKE 421
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ L FE +W ++ +V + ++
Sbjct: 422 FAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPP 481
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLG 279
+D++ + + L + + R ++K R M+ +EK+ L
Sbjct: 482 PIDLRFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLS 541
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 542 ENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 592
>gi|356549487|ref|XP_003543125.1| PREDICTED: uncharacterized protein LOC100802622 [Glycine max]
Length = 531
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 132/288 (45%), Gaps = 37/288 (12%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + + + +++ +HK W F PVDV GL LHDY ++I++PMD T+K+ + Y
Sbjct: 151 LMKCCSQVLQKLIKHKHGWVFKAPVDVVGLKLHDYCDIIKQPMDLGTVKSNL---SKNVY 207
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--EKRQEE 221
+ +DVRL F NA+ YN + DV+ MA+ LL +FEE + + K R+ E
Sbjct: 208 ATPADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSIVHDRESE 267
Query: 222 EEAKAQLDMQLTQEAVQT-----------------NKAKELRSELNEVDMQLEN-LRETV 263
EE +A Q+ E V+ + A L + ++ + +R
Sbjct: 268 EELQASSWSQVEPERVKKKENPIPPAKLHKEPPPQHPASSSNPPLVQSPVRTPSPMRAPP 327
Query: 264 IQKC------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEV 311
++ R MS EEK LG L L PE + + ++I+ N E+
Sbjct: 328 VKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDEI 387
Query: 312 DLDMDAQSELTLWRLKVFVQESLKAAS--RSSGDMGGNNNNNNDDNNN 357
+LD++A TLW L V K S + MG +NNNND +N
Sbjct: 388 ELDIEAVDTETLWELDRLVTNYKKMVSKIKRQALMGNIDNNNNDVQSN 435
>gi|413936534|gb|AFW71085.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 667
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E
Sbjct: 330 SSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKE 386
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ L FE +W ++ +V + ++
Sbjct: 387 FAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPP 446
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLG 279
+D+ + + L + + R ++K R M+ +EK+ L
Sbjct: 447 PIDLHFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLS 506
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 507 ENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 557
>gi|413936535|gb|AFW71086.1| hypothetical protein ZEAMMB73_942769 [Zea mays]
Length = 671
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 111/231 (48%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E
Sbjct: 330 SSLLSRLMKHKFGWVFNKPVDPVALGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKE 386
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ L FE +W ++ +V + ++
Sbjct: 387 FAEDVRLTFHNAMTYNPKGQDVHFMAEQLSGIFEAQWPEIEAEVNYLASCPPLPKKFPPP 446
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLG 279
+D+ + + L + + R ++K R M+ +EK+ L
Sbjct: 447 PIDLHFLERSDSMRHHMALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLS 506
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++++ N S E+++++D+ TLW L FV
Sbjct: 507 ENLQNLPPEKLDAVVQVIKNKNLSVMQHDDEIEVEIDSMDAETLWELDRFV 557
>gi|218190413|gb|EEC72840.1| hypothetical protein OsI_06575 [Oryza sativa Indica Group]
Length = 420
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 108/231 (46%), Gaps = 13/231 (5%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TIK ++ YRN RE
Sbjct: 85 SLLSRLMKHKFGWVFNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQ---YRNPREF 141
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQ 227
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + +
Sbjct: 142 ADDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEVQWPEIEAEVQYLASCPPLPNKFPPPP 201
Query: 228 LDMQLTQEAVQTNKAKELRSELNEVDMQLENLRET--------VIQKCRKMSTEEKKNLG 279
+D++ + L S+ + T R M+ +EK+ L
Sbjct: 202 IDVRFLDRSDSVKHHMALDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLS 261
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L PE L ++I+ N S E+++++D+ TLW L FV
Sbjct: 262 NNLQNLPPEKLDVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFV 312
>gi|255567054|ref|XP_002524509.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223536183|gb|EEF37836.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 553
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 36/277 (12%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +E+ ++ + ++ +H++ W F PVDV+ L LHDY+++I+ PMD T+K+++
Sbjct: 206 GRCNREVFKKCEDLLEKLMKHQYGWVFNKPVDVKKLKLHDYFKIIKHPMDLGTVKSRLKK 265
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y++ +E DV+L F NAMKYND+ D H+MA LL+ FEE W + P+ + E+
Sbjct: 266 ---NWYKSPKEFAEDVKLTFNNAMKYNDKGQDAHIMADVLLKLFEEHWAIIEPEFINNER 322
Query: 218 -----------------------RQEEEEAKAQLDMQLTQEAV---QTNKAKELRSELNE 251
A A L ++ + + K + S +
Sbjct: 323 VDMGYDAGLPRPAPNRASAPPAPAPSPVLASAPLRKMPSESKILDRSESMTKPMNSSMKA 382
Query: 252 VDMQLENLRETVIQKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF 304
+M R + +K R+M+ EEK+ L L + + L ++I+ + NP
Sbjct: 383 ANMATHEGRLPMSKKPKEIDPQRREMTFEEKQRLSADLLDMPSDKLDSVVQIIRKRNPGL 442
Query: 305 HATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 341
E+++D+D+ TLW L V K ++ S
Sbjct: 443 CQQDDEIEVDIDSFDSETLWELDRLVNNHKKGLTKDS 479
>gi|413925979|gb|AFW65911.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
gi|413925980|gb|AFW65912.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 665
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E
Sbjct: 324 SSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKE 380
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++
Sbjct: 381 FAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPP 440
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLG 279
+D++ + + L + + R ++K R M+ +EK+ L
Sbjct: 441 PIDLRFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLS 500
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L P L ++++ N S E+++++D+ TLW L FV
Sbjct: 501 ENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFV 551
>gi|413925981|gb|AFW65913.1| hypothetical protein ZEAMMB73_814222 [Zea mays]
Length = 670
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 112/231 (48%), Gaps = 12/231 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +HK+ W F PVD LGLHDY+ +I+ PMD TI+ ++ YRN +E
Sbjct: 324 SSLLSRLMKHKFGWVFNKPVDPVTLGLHDYFTIIKHPMDLGTIRGRLSRGQ---YRNPKE 380
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKA 226
DVRL F NAM YN + DVH MA+ LL FE +W ++ +V + ++
Sbjct: 381 FAEDVRLTFHNAMTYNPKGQDVHFMAEQLLGIFEAQWPEIEAEVNYLASCPPLPKKFPPP 440
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-------MSTEEKKNLG 279
+D++ + + L + + R ++K R M+ +EK+ L
Sbjct: 441 PIDLRFLERSDSMRHHVALDTNSRPISHTPTYTRTPSMKKPRAKDPNKRDMTIDEKRKLS 500
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
L L P L ++++ N S E+++++D+ TLW L FV
Sbjct: 501 ENLQNLPPVKLDAVVQVIKNKNLSVKQHDDEIEVEIDSMDAETLWELDRFV 551
>gi|412993064|emb|CCO16597.1| bromodomain containing 2 [Bathycoccus prasinos]
Length = 1076
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 104/206 (50%), Gaps = 16/206 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
+ RQ A RQ+ H W PF PVD LGL +Y+ +I PMD TIK ++ DG Y
Sbjct: 503 VHRQCLAAVRQVMSHDWGGPFRMPVDAVALGLANYHTIITNPMDLGTIKKFIE--DGGKY 560
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK------ 217
+E++ DV L F NAMK+N E DVHVMAK+LL + K+ ++ + E E+
Sbjct: 561 ELAKEVHEDVELTFNNAMKFNAEGTDVHVMAKTLLALWHTKYEGIVAREKEVEEGLLLDR 620
Query: 218 ---RQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEE 274
+ A ++L+ Q Q QT + L QL +L I + M+ +E
Sbjct: 621 DACIAKAAAAASKLEYQTIQSECQT-----IMQALGLAQNQLSDLELKSIVLFKPMTADE 675
Query: 275 KKNLGTALTRLSPEDLCKALEIVAEN 300
K LG L L+ ED KA +I+++
Sbjct: 676 KSALGDILKSLTAEDSEKARQILSDG 701
>gi|224056335|ref|XP_002298808.1| global transcription factor group [Populus trichocarpa]
gi|222846066|gb|EEE83613.1| global transcription factor group [Populus trichocarpa]
Length = 474
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 45/289 (15%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+L + + I ++ +HK + F PVDV G+ LHDY+++I+ PMD T+K+K+
Sbjct: 172 QLMKNCSQILSKLMKHKLGYIFNSPVDVVGMQLHDYHDIIKSPMDLGTVKSKL---TKNL 228
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME---EEKRQ 219
Y + R+ ADVRL F NAMKYN + +V+++A+ L +FE+ + + KV E EE+
Sbjct: 229 YESPRDFAADVRLTFNNAMKYNPKGHEVYMLAEQFLTRFEDFYRPIKEKVGEDFDEEEND 288
Query: 220 EEEEAKA--------------QLD---MQLT---------------QEAVQTNKAKELRS 247
+ +E +A Q+D MQ+T Q+ N+ L
Sbjct: 289 QVQEVQASSWDHIRREPERVNQIDDDFMQVTAKSDPIGHQMHQQPLQQPTGLNQNPNLVR 348
Query: 248 ELNEVDM-QLENLRETVIQ----KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNP 302
+ + M Q++ +++ + R+MS EEK LG L L E + + ++I+ + N
Sbjct: 349 TPSPMRMPQVKPVKQPKPKAKDPNKREMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNG 408
Query: 303 SFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAAS--RSSGDMGGNNN 349
E++LD++A TLW L FV K S + MG NNN
Sbjct: 409 HLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVSKIKRQALMGINNN 457
>gi|348538983|ref|XP_003456969.1| PREDICTED: hypothetical protein LOC100693386 [Oreochromis
niloticus]
Length = 1432
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 3 PMSGLNQDLGNVGLGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQP 62
P S D+ G+ TV GL+ T+ ILQ L +K + + T
Sbjct: 321 PFSLSASDVLAQGMTSVPPPTVTHPGLHPTVP-ILQSSPALIKKKSQKRKADTTTPTAND 379
Query: 63 NTSKSISIAKEKLKDRHVASIEKQ------QQDAFHR-------EEAAGRRMQELKRQFA 109
S+S ++ E R + KQ Q D+ H E+ + QE R A
Sbjct: 380 QLSESSPVSAETRPRRDSSRPSKQPKREASQPDSQHHLGGGLEMGESGTPKRQEQLRWCA 439
Query: 110 AIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
+ R++ K +AWPF PVD + LGLHDY+E+I+ PMD STIK K+D + YR+
Sbjct: 440 RLVREMLSKKHVAYAWPFYKPVDAKALGLHDYHEIIKHPMDLSTIKKKLDNRQ---YRDA 496
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+E ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 497 QEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEMRFAKM 538
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H +AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 77 RQTNQLQYLQKVVLKTLWKHNFAWPFQAPVDAIKLNLPDYYKIIKSPMDMGTIKKRLENN 136
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 137 ---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 179
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
+C+ MS EEK+ L + +L + L + + I+ PS ++ E+++D + TL
Sbjct: 702 RCKPMSYEEKRQLSLDINKLPGDKLGRVVHIIQTREPSLKNSNPDEIEIDFETLKPSTLR 761
Query: 325 RLKVFVQESLKAASRSSG 342
L+ +V L+ + SG
Sbjct: 762 ELEKYVSSCLRKKKKPSG 779
>gi|281209232|gb|EFA83405.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1172
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 117/221 (52%), Gaps = 29/221 (13%)
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
H+ +PF+ PVD L + DY+ I+ PMDF TI+N + DG Y E AD RLVF
Sbjct: 545 HQMGYPFLVPVDPIALNILDYFTYIKHPMDFGTIRNSL--LDGV-YEAPDEFAADCRLVF 601
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAV 237
NA YN + VH+MAK+L + FE+K+ + L + E + EE E +L M++
Sbjct: 602 SNARLYNPPANQVHIMAKTLEDLFEKKYAKALAEPPSPEIQPEESEKIKRLTMEM----- 656
Query: 238 QTNKAKELRSELNEVDMQLENL---RETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKAL 294
K + EL + M+ E+ R + R M+ +EK +LG A+ L P +L K +
Sbjct: 657 -----KTMTKELEK--MKKESTGGGRGRYREAARPMTLDEKTHLGAAINALHPSNLPKLI 709
Query: 295 EIVAENNPSFHA----TAQ-EVDLDMDAQSELTLWRLKVFV 330
++++ H TAQ E+++D++ TL RL+ FV
Sbjct: 710 QVIS------HTLDQNTAQEEIEIDLEKLDTGTLRRLEQFV 744
>gi|359475584|ref|XP_003631709.1| PREDICTED: transcription factor GTE2-like [Vitis vinifera]
Length = 561
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 59/273 (21%)
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
++ +HK +W F PVDV G+GLHDY+++I++PMD T+K+K+ Y + + ADV
Sbjct: 180 KLMKHKHSWVFNSPVDVVGMGLHDYHQIIKRPMDLGTVKSKI---AKNLYDSPLDFAADV 236
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE---------- 223
RL F NA+ YN + DVHVMA+ LL +FE+ + + K+ E+E+ QE
Sbjct: 237 RLTFDNALLYNPKGHDVHVMAEQLLARFEDLFKPVYNKLEEDERDQERIIVGGGRGGVSA 296
Query: 224 --------------------------------AKAQLDMQLTQEAVQTNKAKELRSELNE 251
AK MQ+ A ++ ++S
Sbjct: 297 IAGTSGGEELQGSSWNHIPTPERLKKPSPKPVAKKPERMQVPIPATGSSNPPSVQSVPTP 356
Query: 252 VDMQLENLRETVIQKC--------------RKMSTEEKKNLGTALTRLSPEDLCKALEIV 297
M+ ++ + R+MS EEK LG L L E + + ++I+
Sbjct: 357 SPMRAPPVKPLATRPSSGKQPKPKAKDPNKREMSLEEKHKLGLGLQSLPQEKMDQVVQII 416
Query: 298 AENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
++ N E++LD++A TLW L V
Sbjct: 417 SKKNGHLTQDGDEIELDIEAVDTETLWELDRLV 449
>gi|449439059|ref|XP_004137305.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
gi|449483310|ref|XP_004156552.1| PREDICTED: transcription factor GTE4-like [Cucumis sativus]
Length = 538
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 19/249 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
G ++ + + + + ++ +HK+ W F PVD + LGLHDY+++I KPMD TIK ++
Sbjct: 225 GGKIGPVLKSCSNLLERLMKHKFGWVFNVPVDAKRLGLHDYHKIITKPMDLGTIKMRL-- 282
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
+ Y++ RE DVRL F NA+ YN + +DVH+MA+ L FEEKW + K +
Sbjct: 283 -NKNWYKSPREFAEDVRLTFSNAITYNPKGEDVHMMAEQLSNIFEEKWKTIEGKQNVGKG 341
Query: 218 RQEEEEAKAQLDMQLTQEAVQTNKAKE---LRSELNEVDMQLENLRETVI---------- 264
Q ++ + A+ T + RS+ N ++
Sbjct: 342 FQVDDGSVLPTPTSRKSPALATRPVESRTFSRSDSTTKHFLTSNPKQPPTDVAPPDKKPK 401
Query: 265 ---QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
+ R M+ EEK+ L L L + L ++I+ + N E++LD+ +
Sbjct: 402 AKNHEIRDMTYEEKQKLSIDLQDLPSDKLNNVVKIIKKRNQGLFQNDDEIELDIGSVDSE 461
Query: 322 TLWRLKVFV 330
TLW L+ FV
Sbjct: 462 TLWELERFV 470
>gi|330792873|ref|XP_003284511.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
gi|325085541|gb|EGC38946.1| hypothetical protein DICPUDRAFT_75494 [Dictyostelium purpureum]
Length = 1321
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 130/253 (51%), Gaps = 24/253 (9%)
Query: 96 AAGRRMQELKRQFAAIFR-------QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
+ GRR + + +F+ ++ +H A PF+ PVD LG+ DY+ I++PMDF
Sbjct: 632 SKGRRRILMDVVLSPVFKRCSDLLDELMEHPQAGPFLVPVDPYALGILDYFNFIKRPMDF 691
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
TIKN + G G Y + E DVRLVF NA YN + VH+MAK+L + FEEK+
Sbjct: 692 GTIKNSIVG--GV-YHTIDEFAEDVRLVFSNAKAYNPPANLVHIMAKTLEDLFEEKF--- 745
Query: 209 LPKVMEEEKRQEEEEAKAQLD-------MQLTQEAVQTNKAKELRSELNEVDMQLENLRE 261
P+V+EE +E + K + + + + ++ + R +
Sbjct: 746 -PQVIEEPDESDETQDKVNVSNVNKDSRRKPSSSSPSSSHSSSKRRSSTSSSRSSSSRSS 804
Query: 262 TVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENN--PSFHATAQEVDLDMDAQS 319
+ +K +++ EEK LG+ +T+L E L K L+I+ N P H +EV++D++
Sbjct: 805 SNRKKLPEITMEEKTKLGSEITQLPVEYLPKILQIIHNTNSLPD-HDPNEEVEIDLNNFD 863
Query: 320 ELTLWRLKVFVQE 332
+ TL RL FV++
Sbjct: 864 DDTLRRLNRFVEQ 876
>gi|449438275|ref|XP_004136914.1| PREDICTED: uncharacterized protein LOC101209352 [Cucumis sativus]
gi|449521741|ref|XP_004167888.1| PREDICTED: uncharacterized protein LOC101228592 [Cucumis sativus]
Length = 539
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + A I ++ + K+ F PVDV GLGLHDYY++I+ PMD T+K+ + Y
Sbjct: 169 LMKTCAQILNKLMKQKYGLIFNKPVDVVGLGLHDYYDIIKHPMDLGTVKSTLSK---NLY 225
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEE 221
+ + DVRL F NAM+YN + +VH++A+ L KFEE +L + K+ +++ EE
Sbjct: 226 DSPLDFAEDVRLTFNNAMRYNPKGHEVHILAEQWLVKFEEMFLPVSRKLGALKQPDPYEE 285
Query: 222 EEAKAQLDMQLTQEAV----QTNKAKE--LRSELNEVDMQLENLRETVIQKC-------- 267
E + + E V NK E + S L + +R +
Sbjct: 286 ELQSSSWNHVEEVENVNFNSNGNKPVEVVVPSSLTKPPSVQSPVRTPSPVRAPQVKPVKQ 345
Query: 268 ----------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDA 317
R MS EEK LG L L PE + + ++IV + + E++LD++A
Sbjct: 346 PKPKAKDPNKRDMSLEEKHRLGIGLQGLPPEKMDQVIQIVKKRSGHLRQDGDEIELDIEA 405
Query: 318 QSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDN--NNEKDNSN 363
TLW L V K S+ N+N N D N NNE + N
Sbjct: 406 VDTETLWELDRLVTNWKKMMSKVKRQALINDNTNADSNKENNEISSVN 453
>gi|359491054|ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
[Vitis vinifera]
Length = 770
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 123/230 (53%), Gaps = 23/230 (10%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + ++ H++ W F +PVDV L + DY+ VI+ PMD TIK+KM + Y
Sbjct: 211 LMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGE---Y 267
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQE 220
+ + ADVRL F NAM YN +DVH MA++L + FE +W + LP ++ E
Sbjct: 268 LSPFDFAADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESLPS 327
Query: 221 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 280
+A +++ T + + +K K++ +++ M+ R M+ EE+ NLGT
Sbjct: 328 RSDAHLEIE---TADRMPPSKKKKVAPTDHKIKMEPNK---------RIMTKEERHNLGT 375
Query: 281 ALTRL---SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
L L P+D+ L+ + N A+ E+++D+DA S+ TL+ L+
Sbjct: 376 ELETLLGELPDDIVDFLKEQSFNE--NQASEDEIEIDIDALSDDTLFTLR 423
>gi|1588281|prf||2208296A RING3 protein
Length = 509
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 203 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 259
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
KYN DV MA+ L + FE ++ ++ + + E+ A +Q + + +
Sbjct: 260 CYKYNPPDHDVVAMARKLQDVFEFRYAKMPDEPEQLRAVHEQLAALSQGPISKPKRKREK 319
Query: 240 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 299
+ K+ R ++ R MS +EK+ L + +L E L + + I+
Sbjct: 320 KEKKKKRKAKTAPPALPTGYDSEEEEESRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQA 379
Query: 300 NNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
PS + +E+++D + TL L+ +V L+ R
Sbjct: 380 REPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPR 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|328865269|gb|EGG13655.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1155
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 27/235 (11%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
+KR F I ++ H+ ++PF+ PVD LG+ DY++V++ PMDF TI+N + G Y
Sbjct: 453 MKRCFD-ILETLSNHQHSYPFLAPVDPVALGILDYFDVVKHPMDFGTIRNLL--LSGV-Y 508
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEKRQEE 221
+ + E D RLVF NA YN + VH+MA +L + FE K+ LQ P + E+ EE
Sbjct: 509 QEMEEFAIDCRLVFSNAKDYNPPNNPVHIMAITLEDIFERKYSKLQNTPNLETAEEVSEE 568
Query: 222 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
E K +LT+E K ++ EL ++ RE+ K +M+ EEK LGT
Sbjct: 569 ERIK-----KLTEE------NKHMQKELEKMK------RESRKPKQPQMTLEEKTQLGTN 611
Query: 282 LTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLK 335
++ L PE L + IV+ P+ TAQ E+ +D++ TL +++ FV L+
Sbjct: 612 ISFLPPERLRDLISIVSHTLPN---TAQDEIVIDLEKLDNSTLRKMEQFVFSCLR 663
>gi|414588437|tpg|DAA39008.1| TPA: hypothetical protein ZEAMMB73_513409 [Zea mays]
Length = 577
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 4/152 (2%)
Query: 54 YLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFR 113
Y++ ++ +T + +K K V SI + + + +AA + + R I R
Sbjct: 12 YISSESGDSDTDSDVEGSKHSQKS-GVTSISTCEHQSSYNLKAASMKSSRMIRLCGNIVR 70
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
++ HK W F PVD + G+ DY++VI PMD TIKNK+ K Y ++ E ADV
Sbjct: 71 KLIDHKCGWLFKEPVDPDLYGIPDYFDVIRSPMDLGTIKNKLTKKK---YVSIEEFAADV 127
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
RL F NAMKYN +DVH+ AK L E F+ +W
Sbjct: 128 RLTFSNAMKYNPPGNDVHIFAKELNEMFDSEW 159
>gi|295828222|gb|ADG37780.1| AT1G06230-like protein [Neslia paniculata]
Length = 210
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 107 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPRE 163
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVHVMA++LL+ FEE+W
Sbjct: 164 FADDVRLTFHNAMTYNPAGQDVHVMAETLLQIFEERW 200
>gi|302848828|ref|XP_002955945.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
gi|300258671|gb|EFJ42905.1| hypothetical protein VOLCADRAFT_119228 [Volvox carteri f.
nagariensis]
Length = 569
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 117/219 (53%), Gaps = 16/219 (7%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R + +++ + + ITQHKWA+PF +PVD DY ++I PMDFSTIK + +
Sbjct: 81 RLAEVVQKHCSTALKSITQHKWAFPFNNPVDTARF--PDYPKIISSPMDFSTIKAR---Q 135
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 217
DG YR+ ++ ++DV LVF NA +YN D ++MA++L E EEK+ +++ P++ E E
Sbjct: 136 DGGYYRDPKDWWSDVMLVFSNAKRYNAPGSDCYLMAQTLQEVSEEKYDKVIAPRLAEAEA 195
Query: 218 RQEEEEA-----KAQLDMQLTQEAVQTNKAK--ELRSELNEVDMQLENLRETVIQKCRKM 270
EE +A+L Q EA+ A L +EL+ + ++L ++ C +
Sbjct: 196 VTLREEVHLKKKRAELVNQQISEAMDAQCAVLFNLMAELHAAIREAKSLASSL---CEPL 252
Query: 271 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ 309
+ EEK+ L + L L + VA +P +T +
Sbjct: 253 TLEEKQALAATIQGLPTAQLEAIVAFVASRHPPSVSTCE 291
>gi|295828214|gb|ADG37776.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828218|gb|ADG37778.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 107 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNX---YKSPRE 163
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 164 FADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|226530258|ref|NP_001151218.1| bromodomain containing protein [Zea mays]
gi|195645110|gb|ACG42023.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ I ++ + K + F PV+VE LGLHDY+ VI++PMD T+K +G Y
Sbjct: 105 MRKRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVK---EGLAAGRY 161
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ + ADVRL F NA++YN +VH A +LL FE + + L + EE KR E
Sbjct: 162 ASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPR 221
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
A +L + ++ V M+ RE R+MS EEK L L
Sbjct: 222 PVAA---ELPPPPAVEPVEAKAKTRAGNVRMRKPKAREP---NKREMSLEEKNMLRLGLV 275
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ---ESLKAASRS 340
L E + L+IV + N + E++LD+D T W L FV ++LK + R+
Sbjct: 276 SLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRA 335
Query: 341 SGDMGG 346
+ GG
Sbjct: 336 AMLNGG 341
>gi|295828212|gb|ADG37775.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 107 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNI---YKSPRE 163
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 164 FADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|413919577|gb|AFW59509.1| bromodomain containing protein [Zea mays]
Length = 447
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 120/246 (48%), Gaps = 12/246 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ I ++ + K + F PV+VE LGLHDY+ VI++PMD T+K +G Y
Sbjct: 105 MRKRCGQILSRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVK---EGLAAGRY 161
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ + ADVRL F NA++YN +VH A +LL FE + + L + EE KR E
Sbjct: 162 ASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALVCLEEERKRLEPPR 221
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
A +L + ++ V M+ RE R+MS EEK L L
Sbjct: 222 PVAA---ELPPPPAVEPVEAKAKTRAGNVRMRKPKAREP---NKREMSLEEKNMLRLGLV 275
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ---ESLKAASRS 340
L E + L+IV + N + E++LD+D T W L FV ++LK + R+
Sbjct: 276 SLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRA 335
Query: 341 SGDMGG 346
+ GG
Sbjct: 336 AMLNGG 341
>gi|345288391|gb|AEN80687.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288393|gb|AEN80688.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288395|gb|AEN80689.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288397|gb|AEN80690.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288399|gb|AEN80691.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288401|gb|AEN80692.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288403|gb|AEN80693.1| AT1G06230-like protein, partial [Capsella rubella]
gi|345288405|gb|AEN80694.1| AT1G06230-like protein, partial [Capsella rubella]
Length = 197
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 103 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPRE 159
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 160 FADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 196
>gi|295828216|gb|ADG37777.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 107 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPRE 163
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 164 FADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|295828210|gb|ADG37774.1| AT1G06230-like protein [Capsella grandiflora]
gi|295828220|gb|ADG37779.1| AT1G06230-like protein [Capsella grandiflora]
Length = 210
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+A+ ++ +HK W F PVDV+GLGLHDY+ +IE PMD TIK+ + Y++ RE
Sbjct: 107 SALLERLMKHKHGWVFNAPVDVKGLGLHDYFTIIEHPMDLGTIKSALTKNM---YKSPRE 163
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN DVH+MA++LL+ FEE+W
Sbjct: 164 FADDVRLTFHNAMTYNPAGQDVHLMAETLLQIFEERW 200
>gi|297850172|ref|XP_002892967.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
gi|297338809|gb|EFH69226.1| hypothetical protein ARALYDRAFT_312744 [Arabidopsis lyrata subsp.
lyrata]
Length = 482
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 74/285 (25%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK AW F PVD EGLGLHDY+ ++++PMD T+K K+ GK+ Y++ +
Sbjct: 138 SLLTKLMKHKCAWVFHVPVDAEGLGLHDYHNIVKEPMDLGTVKTKL-GKN--LYKSPLDF 194
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL--------------------- 208
DVRL F NA+ YN DVH A+ LL FE+KW+ +
Sbjct: 195 AEDVRLTFNNAILYNPVGHDVHRFAELLLNMFEDKWVSIEMQYDNLHRKFKPTRDIEFPA 254
Query: 209 ----LPKVME----------------------EEKRQEEEEAKAQLDMQLTQEAVQT--N 240
+ ++E E E EE+ + + + EAV T +
Sbjct: 255 PASTIAPIVEPLPAVPTPPSPSPPPPPQPPVLENTTWEREES---MTIPVEPEAVTTAPD 311
Query: 241 KAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 300
KA+E + +N D+ L EEK+ L L L + L ++I+ ++
Sbjct: 312 KAEEEEAPVNNRDLTL----------------EEKRRLSEELQDLPYDKLETVVQIIKKS 355
Query: 301 NPSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKAASRSSG 342
NP E++LD+D+ TLW L FV +ESL + + G
Sbjct: 356 NPELSQQDDEIELDIDSLDINTLWELYRFVTGYKESLSKKNEAQG 400
>gi|449440580|ref|XP_004138062.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
gi|449501388|ref|XP_004161353.1| PREDICTED: transcription factor GTE10-like [Cucumis sativus]
Length = 781
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q + +++ H + W F PVDV L + DY+ VI+ PMD T+K+K+ + Y +
Sbjct: 207 KQCEQLLQRLMSHTFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKSKLTAGE---YTH 263
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEE 222
+ ADVRL F NAM YN +DVH MAK+L + FE +W + P EE+++
Sbjct: 264 PLDFAADVRLTFSNAMTYNPPANDVHTMAKTLSKFFEVRWKTIEKKFPTTTEEQRQV--- 320
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
A + + A+ K+ + N+ D+Q ++ + M+ +EK L L
Sbjct: 321 -PSATTVPKEAESALPVPPPKKTKFPTNDPDVQPTSV-------VKVMTDQEKHKLSVEL 372
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
L E + + E++ + A E+++D+DA S+ TL+ L+
Sbjct: 373 EALLGELPESIINFLKEHSSNSQAGEDEIEIDIDALSDDTLFALR 417
>gi|224103835|ref|XP_002313212.1| global transcription factor group [Populus trichocarpa]
gi|222849620|gb|EEE87167.1| global transcription factor group [Populus trichocarpa]
Length = 224
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 19/236 (8%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + + I ++ + K + F PVDV GL LHDY+++I+ PMD T+K + Y
Sbjct: 1 LMKNCSQILSKLMKQKLGYIFNTPVDVVGLQLHDYHDIIKNPMDLGTVKTNL---SKNLY 57
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ R+ ADVRL F NAMKYN + +V+++A+ L +F++ + + +EK+Q+
Sbjct: 58 ESPRDFAADVRLTFNNAMKYNPKGHEVYILAEQFLTRFQDLYRPI------KEKQQQPTG 111
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
+ T ++ + K L+ + + N RE M+ EEK LG L
Sbjct: 112 MNQNPNSVRTPSPMRVPQVKPLKQP--KPKAKDPNKRE--------MNLEEKHKLGVGLQ 161
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L E + + ++I+ + N E++LD++A TLW L FV K S+
Sbjct: 162 SLPQEKMEQVVQIIRKRNGHLRQEGDEIELDIEAVDTETLWELDRFVTNYKKMVSK 217
>gi|297842055|ref|XP_002888909.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
gi|297334750|gb|EFH65168.1| hypothetical protein ARALYDRAFT_316265 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 119/254 (46%), Gaps = 22/254 (8%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +HK W F PVD LGLHDY+ ++EKPMD T+K ++ + Y++ E
Sbjct: 121 LLTKLMKHKSGWVFNTPVDAVRLGLHDYHTIVEKPMDLGTVKTRL---SKSWYKSPLEFA 177
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-----LPKVMEEEKRQEEEEAK 225
DVRL F NAM YN DVH MA+ LL FEEKW L L ++ R + A
Sbjct: 178 EDVRLTFNNAMLYNPVGHDVHHMAEFLLNLFEEKWAPLETQYGLLNRKQQPVRDIDLHAP 237
Query: 226 AQLDMQ----------LTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKC---RKMS 271
+ V+ + S N V L + E +++ R ++
Sbjct: 238 VSTNTHNIEPFPLPPPPPPTVVENRTLERAESITNPVKPAVLPVVPEKPVEEASADRDLT 297
Query: 272 TEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ 331
+EK+ L L L + L ++I+ ++NP E++LD+D+ TLW L FV
Sbjct: 298 FDEKRRLSEDLQDLPYDKLEAVVQIIKKSNPELSQQDDEIELDIDSLDLETLWELYRFVT 357
Query: 332 ESLKAASRSSGDMG 345
E + +S+ + G
Sbjct: 358 EYKERSSKKKEEHG 371
>gi|356554838|ref|XP_003545749.1| PREDICTED: transcription factor GTE11-like [Glycine max]
Length = 536
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 120/272 (44%), Gaps = 39/272 (14%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + + + +++ +HK W F PVDV GL L DYY+VI++PMD T+K+ + Y
Sbjct: 154 LMKGCSQVLQKLMKHKHGWIFNAPVDVVGLQLTDYYDVIKQPMDLGTVKSNLSMNK---Y 210
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQ 219
+ +DVRL F NA+ YN + DV+ +A+ LL +FEE + L K V + + +
Sbjct: 211 TTPSDFASDVRLTFNNALAYNPKGHDVYTVAELLLTRFEELYRPLHEKFEGSVGHDRESE 270
Query: 220 EEEEAKAQLDMQ--------------------LTQEAVQTNKAKELRSELNEVDMQLENL 259
EE +A + ++ L QE Q + L +
Sbjct: 271 EELQASSWSHVEPERVKKKENPTPPPPPPPEKLQQEPPQPPASSSNPPLLQSPVRTPSPM 330
Query: 260 RETVIQKC------------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT 307
R ++ R MS EEK LG L L PE + + ++I+ N
Sbjct: 331 RAPPVKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQD 390
Query: 308 AQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
E++LD++A TLW L V K S+
Sbjct: 391 GDEIELDIEAVDTETLWELDRLVTNYKKMVSK 422
>gi|112292667|gb|ABI14812.1| chloroplast bromodomain-containing protein [Pachysandra terminalis]
Length = 428
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 130/307 (42%), Gaps = 44/307 (14%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
G+ + + +Q I ++ +HK W F PVDV G+GLHDY ++I+ PMD T+K + G
Sbjct: 30 GKMLSSMMKQCGQILTKLMRHKHGWIFNVPVDVVGMGLHDYNQIIKHPMDLGTVKLNI-G 88
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE-------------- 203
K+ Y + + +DVRL F NA+ YN + DV+ MA+ LL +FEE
Sbjct: 89 KN--LYSSPLDFASDVRLTFNNALSYNPKGHDVYAMAEQLLVRFEEMFEPAYKKFEDAQQ 146
Query: 204 -----------KWLQLLPKVMEEEKRQEEEEAKAQL------DMQLTQEAVQT-NKAKEL 245
W +P R + A M L+ Q +A
Sbjct: 147 RKISAGEIRRSSWSHQIPMPESIPNRDPLSSSAATRPGGFAHPMPLSTPQPQAFPQALAS 206
Query: 246 RSELNEVDMQLENLRETVIQKC---------RKMSTEEKKNLGTALTRLSPEDLCKALEI 296
S +R +++ R+MS EEK LG +L L E + + ++I
Sbjct: 207 TSAPAPAPKPFMAMRSATVKQPKPKAKDPNKREMSFEEKHKLGLSLQSLPQEKMEQVVQI 266
Query: 297 VAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNN 356
+ + N E++LD++ TLW L FV K S+ +NN N +
Sbjct: 267 IRKRNGHLAQDGDEIELDIEVVDTETLWELDRFVYNCKKLMSKIKRQALVSNNQNTAEEG 326
Query: 357 NEKDNSN 363
N+ S+
Sbjct: 327 NKSPVSD 333
>gi|255072301|ref|XP_002499825.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226515087|gb|ACO61083.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 675
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 21/199 (10%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+++ + RQ A +Q+ HKWA PF PVD L L Y E++++PMD T++ + +
Sbjct: 283 RKLEVVNRQCLAALKQLMAHKWAHPFNKPVDHVALNLPTYPEIVKRPMDLGTVEANI--R 340
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERD-DVHVMAKSLLEKFEEKWLQLLPKVME--- 214
G Y E++ADV LVF NA + + + DVHVMA +L E + ++W + + E
Sbjct: 341 KGGVYACAEEVHADVSLVFSNAKTFTPKPEMDVHVMAVALEEFWAQRWAAVADRAKEVEE 400
Query: 215 --------EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 266
EK+ EE A+ +L A + + L +EL+ + QL++L+
Sbjct: 401 GMTVEKECAEKKSEEMNARKRL-------ASEEMRCAGLMAELDRLRRQLDDLKRQTRSI 453
Query: 267 CRKMSTEEKKNLGTALTRL 285
CR M+T EK L LT +
Sbjct: 454 CRPMTTAEKDQLRRNLTNI 472
>gi|307213342|gb|EFN88794.1| Homeotic protein female sterile [Harpegnathos saltator]
Length = 1514
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 91/183 (49%), Gaps = 31/183 (16%)
Query: 48 NDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDA---FHR----------- 93
N E Y D SK+ I + R + +Q +D FH+
Sbjct: 332 NSFEPMYAPMD------SKNAKIPTRRESGRQIKKPTRQAEDGLVPFHQTNMPLMGAMAQ 385
Query: 94 --EEAAGRRMQELKRQFAA---IFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKP 145
+ A G+ ++L I +++ K +AWPF PVD E LGLHDY+E+I+KP
Sbjct: 386 QPQHAGGKSKEKLSEPLKCCNDILKELFSKKHSGYAWPFYKPVDAELLGLHDYHEIIKKP 445
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MD T+K+KMD ++ Y+ +E +DVRL+F N KYN DV MA+ L + FE ++
Sbjct: 446 MDLGTVKSKMDNRE---YKTAQEFASDVRLIFTNCYKYNPPDHDVVSMARKLQDIFEMRY 502
Query: 206 LQL 208
++
Sbjct: 503 AKI 505
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++IE+PMD TIK ++
Sbjct: 57 GRITNQLQFLLKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIERPMDLGTIKKRL-- 114
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ T Y + +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 115 -ENTYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 164
>gi|339245937|ref|XP_003374602.1| putative bromodomain protein [Trichinella spiralis]
gi|316972199|gb|EFV55887.1| putative bromodomain protein [Trichinella spiralis]
Length = 847
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVEGLGLHDYY+VIE PMD T++ K++ ++ Y + E ADVRL+F N
Sbjct: 388 YAWPFYKPVDVEGLGLHDYYDVIEVPMDLGTVRRKLECRE---YGSPSEFAADVRLIFSN 444
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+YN +V MAK++ E FE+++ QL
Sbjct: 445 CYRYNPPDHEVVKMAKTISEIFEQRFAQL 473
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ R + +HK +WPF PVD L L DY+++I++PMD TI+ ++ Y + ++
Sbjct: 109 VLRAVLRHKHSWPFSKPVDAAKLNLVDYHDIIKRPMDLGTIEKRL---RNCYYYSSQQSM 165
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN D+ VMA++L + F EK +
Sbjct: 166 QDFMTMFTNCYTYNPPGSDIVVMAQALEKVFLEKIAHM 203
>gi|242009661|ref|XP_002425601.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
gi|212509494|gb|EEB12863.1| Bromodomain-containing protein, putative [Pediculus humanus
corporis]
Length = 803
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+KPMD T+K KMD + YR E ADVRL+F N
Sbjct: 371 YAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQ---YRTASEFAADVRLIFTN 427
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 428 CYKYNPSTHDVVAMARKLQDVFEMRYAKI 456
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + + HK+AWP + PVD + L L DY+ +I++PMD +TIK +++ Y N +E
Sbjct: 64 VIKAVCAHKYAWPLLEPVDAKKLNLPDYHRIIKQPMDLTTIKKRLEN---NYYWNAKECI 120
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D +F N YN ++DV VMA+ ++EK + LPK
Sbjct: 121 QDFNTMFTNCYVYNQPQEDVVVMAQ-IVEKLFLTKISTLPK 160
>gi|242070257|ref|XP_002450405.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
gi|241936248|gb|EES09393.1| hypothetical protein SORBIDRAFT_05g004810 [Sorghum bicolor]
Length = 605
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 80 VASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYY 139
V SI Q + ++ +AA + + R I R++ HK W F PVD G+ DY+
Sbjct: 38 VPSISTCQHQSSYKVKAASMKSSRMIRLCGNIVRKLIDHKGGWLFKEPVDPVLYGIPDYF 97
Query: 140 EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 199
+VI PMD T+KNK+ K Y ++ E ADVRL F NAMKYN +DVH +AK L
Sbjct: 98 DVIHNPMDLGTVKNKLTKKQ---YVSIEEFAADVRLTFSNAMKYNPPENDVHKVAKELNG 154
Query: 200 KFEEKWLQLLPKVMEEEKRQEEEEAKA 226
F+ +W + K + QE++ KA
Sbjct: 155 IFDSEWESVERKFRVQNPVQEQQTMKA 181
>gi|255540327|ref|XP_002511228.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223550343|gb|EEF51830.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 759
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 127/238 (53%), Gaps = 25/238 (10%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + ++ H++AW F +PVDVE L + DY+ VI+ PMD T+K+K+ TG
Sbjct: 207 LMKQCETLLSRLMLHQYAWVFNNPVDVEKLNIPDYFTVIKHPMDLGTVKSKIT----TGA 262
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + ADVRL F NAMKYN +DVH MA++L + FE +W + + K + E
Sbjct: 263 YSSPLAFAADVRLTFSNAMKYNPPGNDVHFMAETLSKYFEVRW-KAIEKKLPVTIGAEPV 321
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVD--MQLENLRETVIQKCRKMSTEEKKNLGT 280
+A + ++ T+ + AK + ++ ++D ++LE R+ MS EEK L T
Sbjct: 322 APRAGIHVE-TETKIDPTPAK--KKKIAQIDSMVKLEPFRQV-------MSNEEKLKLST 371
Query: 281 ALTRLSPEDLCKALEIVAENNPSFHATAQ----EVDLDMDAQSELTLWRLKVFVQESL 334
L L E ++ + E++ H Q E+++D+D S+ TL+ L+ + + L
Sbjct: 372 ELEALLSELPETIIDFLKEHS---HNDDQNGEVEIEIDIDTLSDDTLFELRKLLDDYL 426
>gi|357474555|ref|XP_003607562.1| Bromodomain-containing factor [Medicago truncatula]
gi|355508617|gb|AES89759.1| Bromodomain-containing factor [Medicago truncatula]
Length = 980
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ ++ +H++AW F PVDV+GLGLHDY+ +I PMD T+K ++ + Y++ +E
Sbjct: 660 SSLLEKLMKHQYAWVFNTPVDVDGLGLHDYFTIITNPMDLGTVKTRL---NKNWYKSPKE 716
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAM YN + DVH MA+ L + FE++W
Sbjct: 717 FAEDVRLTFHNAMTYNPKGQDVHAMAEQLSKIFEDRW 753
>gi|432855679|ref|XP_004068304.1| PREDICTED: bromodomain testis-specific protein-like [Oryzias
latipes]
Length = 969
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 91/176 (51%), Gaps = 23/176 (13%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGL DY+++I++PMD STIK KMD ++ Y N E ADVRL+F N
Sbjct: 277 YAWPFYTPVDAIALGLQDYHDIIKQPMDLSTIKKKMDHQE---YTNATEFAADVRLMFSN 333
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE----KRQEEEEAKAQLDMQL-TQ 234
+YN V MA+ L E FE +++++ E E RQ + KA L T
Sbjct: 334 CYRYNPPSHGVVYMARKLQEVFEARYMKM---SQEPEGCPVSRQPGDTGKADRVGSLSTS 390
Query: 235 EAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDL 290
+ +T E S EV+ QL +L E + K +GT L RL+ E L
Sbjct: 391 ASSETEGPSEQESSSKEVNTQLAHLEERL------------KAVGTQLARLTQEPL 434
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H+++WPF PVD L + DYY++I+ PMD T+ ++
Sbjct: 27 GRVTNQLLYLERVVIKALWRHQYSWPFRQPVDAVALCIPDYYKLIKHPMDLGTVMQRLKN 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D+ +F N YN DD+ MA++L + F +K Q+
Sbjct: 87 R---YYWEANECIKDISTMFNNCYVYNRPGDDIVFMAQTLEKIFLQKVSQM 134
>gi|413941779|gb|AFW74428.1| hypothetical protein ZEAMMB73_413666 [Zea mays]
Length = 757
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q A + + I H WA PF+ PVD+ L + DY++++++PMD TI+ K+ K G Y
Sbjct: 171 KQCANLLKSIMSHVWAGPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKKL--KAGM-YST 227
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
RE ADVRL F NAM YN +DVH+MAK+L + FE +W
Sbjct: 228 PREFAADVRLTFSNAMNYNPVNNDVHLMAKTLSKNFETRW 267
>gi|354487577|ref|XP_003505948.1| PREDICTED: bromodomain-containing protein 2-like [Cricetulus
griseus]
gi|344253000|gb|EGW09104.1| Bromodomain-containing protein 2 [Cricetulus griseus]
Length = 752
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 78/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 286 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 341
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV VMA+ L +
Sbjct: 342 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVVMARKLQDV 398
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 399 FEFRYAKM 406
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|396080308|ref|NP_571275.2| bromodomain-containing protein 2 isoform 1 [Danio rerio]
gi|157280793|gb|ABV29329.1| bromodomain-containing protein 2a [Danio rerio]
Length = 836
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ Q+L R + I +++ K +AWPF PVDV LGLHDYY++I PMD
Sbjct: 372 HQPVRRGKLSQQL-RYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDL 430
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR+ + ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 431 STIKRKMDHRE---YRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ + + +H +AWPF PVD L L DY
Sbjct: 53 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDY 111
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK ++ + YR+ E D +F N YN DD+ +MA+SL
Sbjct: 112 YNIIKQPMDMGTIKKRL---ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 168
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 169 KAFLQKVAQ-MPEVEEE 184
>gi|157280791|gb|ABV29328.1| bromodomain-containing protein 2a [Danio rerio]
Length = 838
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ Q+L R + I +++ K +AWPF PVDV LGLHDYY++I PMD
Sbjct: 374 HQPVRRGKLSQQL-RYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDL 432
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR+ + ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 433 STIKRKMDHRE---YRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ + + +H +AWPF PVD L L DY
Sbjct: 53 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDY 111
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK ++ + YR+ E D +F N YN DD+ +MA+SL
Sbjct: 112 YNIIKQPMDMGTIKKRL---ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 168
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 169 KAFLQKVAQ-MPEVEEE 184
>gi|396080310|ref|NP_001257500.1| bromodomain-containing protein 2 isoform 2 [Danio rerio]
gi|94732369|emb|CAK04960.1| bromodomain-containing 2 [Danio rerio]
gi|190337777|gb|AAI63905.1| Bromodomain-containing 2a [Danio rerio]
gi|190339055|gb|AAI63902.1| Bromodomain-containing 2a [Danio rerio]
Length = 832
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ Q+L R + I +++ K +AWPF PVDV LGLHDYY++I PMD
Sbjct: 372 HQPVRRGKLSQQL-RYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDL 430
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR+ + ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 431 STIKRKMDHRE---YRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 487
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ + + +H +AWPF PVD L L DY
Sbjct: 53 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDY 111
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK ++ + YR+ E D +F N YN DD+ +MA+SL
Sbjct: 112 YNIIKQPMDMGTIKKRL---ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 168
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 169 KAFLQKVAQ-MPEVEEE 184
>gi|24210305|emb|CAD54663.1| bromodomain containing 2 [Danio rerio]
Length = 806
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ Q+L R + I +++ K +AWPF PVDV LGLHDYY++I PMD
Sbjct: 363 HQPVRRGKLSQQL-RYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDL 421
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR+ + ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 422 STIKRKMDHRE---YRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 478
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ + + +H +AWPF PVD L L DY
Sbjct: 42 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDY 100
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK ++ + YR+ E D +F N YN DD+ +MA+SL
Sbjct: 101 YNIIKQPMDMGTIKKRL---ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 157
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 158 KAFLQKVAQ-MPEVEEE 173
>gi|356554832|ref|XP_003545746.1| PREDICTED: uncharacterized protein LOC100819363 [Glycine max]
Length = 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L + + + +++ +HK W F PVD+ GL LHDY ++I++PMD T+K+ + Y
Sbjct: 148 LMKCCSQVLQKLMKHKHGWVFNAPVDIVGLKLHDYCDIIKQPMDLGTVKSNL---SKNVY 204
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME--EEKRQEE 221
+ +DVRL F NA+ YN + DV+ MA+ LL +FEE + + K R+ E
Sbjct: 205 ATPADFASDVRLTFNNALAYNPKGHDVYTMAEQLLARFEELYRPVHEKFEGSISHDRESE 264
Query: 222 EEAKAQ-----------------------LDMQLTQEAVQTNKAKELRSEL-NEVDMQLE 257
EE +A L + ++ L+S + M++
Sbjct: 265 EELQASSWSHVEPERVKKKEKPPPPPPAKLQQEPPLPPASSSNPPLLQSPVRTPSPMRVP 324
Query: 258 NLRETVIQKC-------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQE 310
++ K R MS EEK LG L L PE + + ++I+ N E
Sbjct: 325 PVKPLKQPKPKAKDPNKRDMSLEEKHKLGLGLQSLPPEKMEQVVQIIRRRNGHLKQDGDE 384
Query: 311 VDLDMDAQSELTLWRLKVFVQESLKAASR 339
++LD++A TLW L V K S+
Sbjct: 385 IELDIEAVDTETLWELDRLVTNYKKMVSK 413
>gi|348513555|ref|XP_003444307.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 810
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
Query: 95 EAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
EA R+ E R I +++ + +AWPF PVD LGLHDY+++I PMD STI
Sbjct: 255 EAKKVRLSEQLRCCNDILKELLSKRHSAYAWPFYVPVDAAALGLHDYHDIITHPMDLSTI 314
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y N +E ADVRL+F N KYN ++V MA+ L E FE ++L+L
Sbjct: 315 KKKMDQRE---YGNAKEFAADVRLMFSNCYKYNPPSNEVVHMARKLQEVFEARYLKL 368
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 7/119 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H+++WPF PVD L L DYY +I PMD TIK ++
Sbjct: 26 GRVTNQLQYLEKVVLQALWRHQYSWPFHQPVDAVALCLPDYYTIITNPMDLGTIKKRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
+ Y + D +F N YN DD+ MAK+L E+ +LQ L K+ +EE
Sbjct: 84 -KNSYYWQAVDCIDDFNTMFTNCYVYNQPGDDIVFMAKTL----EKLFLQKLSKMPQEE 137
>gi|403261526|ref|XP_003923169.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 680
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|162135989|ref|NP_001085290.1| uncharacterized protein LOC443648 [Xenopus laevis]
gi|115313740|gb|AAI23909.1| LOC443648 protein [Xenopus laevis]
gi|159507463|gb|ABW97744.1| bromodomain 4 [Xenopus laevis]
Length = 1351
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A+I R++ K +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D
Sbjct: 373 RYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD--- 429
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y+ +E +DVRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 430 YKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 475
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R R+ +L+ A+ + + +H++AWPF PVDV L L DY+++I+ PMD TIK
Sbjct: 52 RPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIK 111
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+++ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 112 KRLENH---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 631 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 690
Query: 324 WRLKVFVQESLKAASRS 340
L+ +V L+ +S
Sbjct: 691 RELERYVTSCLRKKRKS 707
>gi|410958888|ref|XP_003986045.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Felis catus]
Length = 684
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|395832116|ref|XP_003789122.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Otolemur
garnettii]
Length = 680
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|28278510|gb|AAH45866.1| Brd2a protein [Danio rerio]
Length = 586
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 73/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ Q+L R + I +++ K +AWPF PVDV LGLHDYY++I PMD
Sbjct: 374 HQPVRRGKLSQQL-RYCSTILKELLSKKHTAYAWPFYKPVDVSSLGLHDYYDIIMYPMDL 432
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR+ + ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 433 STIKRKMDHRE---YRDALQFAADVRLMFSNCYKYNPPDHDVVAMARRLQDVFEFRFAKM 489
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ R + +H +AWPF PVD L L DY
Sbjct: 53 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVRMLWRHHFAWPFHEPVDAAKLNLPDY 111
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK +++ YR+ E D+ +F N YN DD+ +MA+SL
Sbjct: 112 YNIIKQPMDMGTIKKRLENNY---YRSASECMQDLNTMFTNCYIYNKPTDDIVLMAQSLE 168
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 169 KAFLQKVAQ-MPEVEEE 184
>gi|426352679|ref|XP_004043837.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Gorilla
gorilla gorilla]
gi|52545711|emb|CAH56208.1| hypothetical protein [Homo sapiens]
gi|119624067|gb|EAX03662.1| bromodomain containing 2, isoform CRA_a [Homo sapiens]
Length = 681
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|332823728|ref|XP_001167922.2| PREDICTED: bromodomain-containing protein 2 isoform 7 [Pan
troglodytes]
Length = 680
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|297661253|ref|XP_002809177.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Pongo
abelii]
Length = 681
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 215 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 270
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 271 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 327
Query: 203 EKWLQL 208
++ ++
Sbjct: 328 FRYAKM 333
>gi|149732108|ref|XP_001496282.1| PREDICTED: bromodomain-containing protein 2-like [Equus caballus]
Length = 804
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|441594234|ref|XP_004092963.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Nomascus leucogenys]
Length = 682
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 213 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 268
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 269 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 325
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 326 FEFRYAKM 333
>gi|355561582|gb|EHH18214.1| hypothetical protein EGK_14770 [Macaca mulatta]
Length = 862
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 393 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 448
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 449 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 505
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 506 FEFRYAKM 513
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 133 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 190
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ + E D+ +F N YN DD+ +MA++L + F +K
Sbjct: 191 -ENSYCWAASECMEDLNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 236
>gi|431916886|gb|ELK16646.1| Bromodomain-containing protein 2 [Pteropus alecto]
Length = 833
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 364 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 419
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 420 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 476
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 477 FEFRYAKM 484
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK +++
Sbjct: 104 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLEN 163
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 164 NY---YWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 207
>gi|383859381|ref|XP_003705173.1| PREDICTED: homeotic protein female sterile-like [Megachile
rotundata]
Length = 1489
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +DVRL+F N
Sbjct: 430 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASDVRLIFTN 486
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 487 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y + +E
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYYWSGKEC 133
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN +DV VMA++L + F K Q+
Sbjct: 134 IQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|328788637|ref|XP_624214.3| PREDICTED: hypothetical protein LOC551826 [Apis mellifera]
Length = 1492
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +DVRL+F N
Sbjct: 430 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASDVRLIFTN 486
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 487 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y + +E
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYYWSGKEC 133
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN +DV VMA++L + F K Q+
Sbjct: 134 IQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|350416106|ref|XP_003490842.1| PREDICTED: homeotic protein female sterile-like isoform 2 [Bombus
impatiens]
Length = 1452
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +DVRL+F N
Sbjct: 396 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASDVRLIFTN 452
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 453 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 481
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y + +E
Sbjct: 69 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYYWSGKEC 125
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN +DV VMA++L + F K Q+
Sbjct: 126 IQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 164
>gi|350416103|ref|XP_003490841.1| PREDICTED: homeotic protein female sterile-like isoform 1 [Bombus
impatiens]
Length = 1486
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +DVRL+F N
Sbjct: 430 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASDVRLIFTN 486
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 487 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 515
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y + +E
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYYWSGKEC 133
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN +DV VMA++L + F K Q+
Sbjct: 134 IQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|296197845|ref|XP_002746465.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Callithrix
jacchus]
Length = 800
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|432882591|ref|XP_004074106.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 823
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ S ++ + R + +K D+ ++ R + + +++ K +A
Sbjct: 352 AKATSGSRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYA 411
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 412 WPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSNCY 468
Query: 182 KYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 469 KYNPPDHDVVAMARKLQDVFE 489
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TI+ ++
Sbjct: 72 GRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 130 -ENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 179
>gi|403261524|ref|XP_003923168.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 800
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|357476127|ref|XP_003608349.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509404|gb|AES90546.1| Bromodomain-containing protein [Medicago truncatula]
Length = 533
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
W F PV+ L LHDY+++I+ PMD T+K+K+ Y E DV+L FKNA
Sbjct: 166 TWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAK---NAYSTPAEFADDVKLTFKNA 222
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------EKRQEEEEAK- 225
+ YN + DV+ A LLEKFEE + + K E+ E +E E+ K
Sbjct: 223 LTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKK 282
Query: 226 -----------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVIQKC------ 267
A+ L + A +N+ +L + +++ + +R ++
Sbjct: 283 KDNPIPIPPPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPK 342
Query: 268 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
R+M+ EEK LG L L PE + + ++I+ + N E++LDM+A
Sbjct: 343 ARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTE 402
Query: 322 TLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 381
TLW L V K S+ +NNN SNK N P R+K DA
Sbjct: 403 TLWELDRLVTNWKKMVSKIKRQALMDNNNV---------PSNKGNGELPDREK--VDATP 451
Query: 382 KPAVKRTKKL 391
K+ KK+
Sbjct: 452 PSEGKKQKKI 461
>gi|18157527|dbj|BAB83842.1| RING3 [Oryzias latipes]
Length = 814
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ S ++ + R + +K D+ ++ R + + +++ K +A
Sbjct: 343 AKATSGSRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYA 402
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 403 WPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSNCY 459
Query: 182 KYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 460 KYNPPDHDVVAMARKLQDVFE 480
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TI+ ++
Sbjct: 72 GRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIRKRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q L P
Sbjct: 130 -ENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPP 188
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKM 270
V ++ + + ++V + E D L +T++ KC +
Sbjct: 189 PVPRSKQSKISGGVTTAHQVPAVSQSVYSPPTPE------TPDSILSTPPQTILTKCSSI 242
Query: 271 STEEKKNLGTALTRLSP 287
+ + ++ + A+T P
Sbjct: 243 TLQPEQTI-PAITGPPP 258
>gi|351703550|gb|EHB06469.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 334 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 389
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 390 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 446
Query: 203 EKWLQL 208
++ ++
Sbjct: 447 FRYAKM 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ T Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|344298832|ref|XP_003421095.1| PREDICTED: bromodomain-containing protein 2 [Loxodonta africana]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|410958884|ref|XP_003986043.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Felis catus]
gi|410958886|ref|XP_003986044.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Felis catus]
Length = 804
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|327264790|ref|XP_003217194.1| PREDICTED: bromodomain-containing protein 4-like [Anolis
carolinensis]
Length = 1344
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ +D YR+ +E ADVRL+F N
Sbjct: 374 YAWPFYKPVDVEALGLHDYRDIIKHPMDLSTIKSKLENRD---YRDAQEFAADVRLMFSN 430
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 431 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H+++WPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RMTNQLQYLLKVVLKTLWKHQFSWPFQQPVDAVKLQLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
+ Y N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 608 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKASTL 667
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 668 RELERYVTSCLR 679
>gi|62122590|dbj|BAD93258.1| RING3 [Oryzias latipes]
Length = 814
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ S ++ + R + +K D+ ++ R + + +++ K +A
Sbjct: 343 AKATSGSRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYA 402
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KMDG++ YR ++ ADVRL+F N
Sbjct: 403 WPFYKPVDAVSLGLHDYHEIIKFPMDLSTIKRKMDGRE---YREAQQFSADVRLMFSNCY 459
Query: 182 KYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 460 KYNPPDHDVVAMARKLQDVFE 480
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 72 GRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAAKLNLPDYHKIIKTPMDMGTIKKRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q L P
Sbjct: 130 -ENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELPP 188
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKM 270
V ++ + + ++V + E D L +T++ KC +
Sbjct: 189 PVPRSKQSKISGGVTTAHQVPAVSQSVYSPPTPE------TPDSILSTPPQTILTKCSSI 242
Query: 271 STEEKKNLGTALTRLSP 287
+ + ++ + A+T P
Sbjct: 243 TLQPEQTI-PAITGPPP 258
>gi|348576418|ref|XP_003473984.1| PREDICTED: bromodomain-containing protein 2 [Cavia porcellus]
Length = 802
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 334 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 389
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 390 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 446
Query: 203 EKWLQL 208
++ ++
Sbjct: 447 FRYAKM 452
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ T Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENTYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|224473811|gb|ACN49152.1| bromodomain containing 2 [Oryzias dancena]
Length = 826
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ S ++ + R + +K D+ ++ R + + +++ K +A
Sbjct: 352 AKATSGSRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYA 411
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I++PMD STIK KMD ++ YR+ ++ ADVRL+F N
Sbjct: 412 WPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSRE---YRDAQQFSADVRLMFSNCY 468
Query: 182 KYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 469 KYNPPDHDVVAMARKLQDVFE 489
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 72 GRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q L P
Sbjct: 130 -ENNYYRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQDEIELAP 188
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKCRK 269
++ + ++ + L T V E D L +T++ KC
Sbjct: 189 PAPRSKQSKNLKKGRNILGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCST 248
Query: 270 MSTEEKKNLGTALTRLSP 287
+ + ++ + A+T L P
Sbjct: 249 PTLQPEQTI-PAITGLPP 265
>gi|440909604|gb|ELR59493.1| Bromodomain-containing protein 2 [Bos grunniens mutus]
Length = 810
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|114326383|ref|NP_001041552.1| bromodomain-containing protein 2 [Canis lupus familiaris]
gi|62899715|sp|Q5TJG6.1|BRD2_CANFA RecName: Full=Bromodomain-containing protein 2
gi|55956582|emb|CAI11405.1| bromodomain-containing protein 2 [Canis lupus familiaris]
Length = 803
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|47059183|ref|NP_997660.1| bromodomain-containing protein 2 [Rattus norvegicus]
gi|392355205|ref|XP_003751971.1| PREDICTED: bromodomain-containing protein 2-like [Rattus
norvegicus]
gi|81872356|sp|Q6MGA9.1|BRD2_RAT RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Protein RING3
gi|46237556|emb|CAE83937.1| bromodomain-containing 2 [Rattus norvegicus]
gi|149043366|gb|EDL96817.1| bromodomain containing 2, isoform CRA_b [Rattus norvegicus]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|71067345|ref|NP_034368.2| bromodomain-containing protein 2 [Mus musculus]
gi|326368244|ref|NP_001191902.1| bromodomain-containing protein 2 [Mus musculus]
gi|81894326|sp|Q7JJ13.1|BRD2_MOUSE RecName: Full=Bromodomain-containing protein 2; AltName:
Full=Female sterile homeotic-related protein 1; AltName:
Full=Fsrg-1; AltName: Full=Protein RING3
gi|2995270|emb|CAA15819.1| MMRING3.1.2 [Mus musculus]
gi|3041763|dbj|BAA25416.1| Ring3 [Mus musculus]
gi|3811391|gb|AAC69907.1| RING3 [Mus musculus]
gi|74186521|dbj|BAE34749.1| unnamed protein product [Mus musculus]
gi|74214328|dbj|BAE40404.1| unnamed protein product [Mus musculus]
gi|123233747|emb|CAM17898.1| bromodomain containing 2 [Mus musculus]
gi|148678305|gb|EDL10252.1| bromodomain containing 2 [Mus musculus]
gi|187954015|gb|AAI38657.1| Bromodomain containing 2 [Mus musculus]
gi|223459952|gb|AAI38656.1| Bromodomain containing 2 [Mus musculus]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|3273701|gb|AAC24810.1| female sterile homeotic-related protein Frg-1 [Mus musculus]
Length = 798
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|297661247|ref|XP_002809174.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pongo
abelii]
gi|297661249|ref|XP_002809175.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Pongo
abelii]
Length = 801
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|380815348|gb|AFE79548.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|380815350|gb|AFE79549.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420527|gb|AFH33477.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|383420529|gb|AFH33478.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948624|gb|AFI37917.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
gi|384948626|gb|AFI37918.1| bromodomain-containing protein 2 isoform 1 [Macaca mulatta]
Length = 802
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|301757117|ref|XP_002914388.1| PREDICTED: bromodomain-containing protein 2-like [Ailuropoda
melanoleuca]
Length = 803
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|114052340|ref|NP_001039331.1| bromodomain-containing protein 2 [Bos taurus]
gi|108935958|sp|Q32S26.1|BRD2_BOVIN RecName: Full=Bromodomain-containing protein 2
gi|63169167|gb|AAY34703.1| bromodomain containing 2 [Bos taurus]
gi|296474561|tpg|DAA16676.1| TPA: bromodomain-containing protein 2 [Bos taurus]
Length = 803
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|397474356|ref|XP_003808648.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 2
[Pan paniscus]
Length = 800
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|114606772|ref|XP_001168005.1| PREDICTED: bromodomain-containing protein 2 isoform 10 [Pan
troglodytes]
gi|114606774|ref|XP_001168036.1| PREDICTED: bromodomain-containing protein 2 isoform 11 [Pan
troglodytes]
gi|410213772|gb|JAA04105.1| bromodomain containing 2 [Pan troglodytes]
gi|410213774|gb|JAA04106.1| bromodomain containing 2 [Pan troglodytes]
gi|410267650|gb|JAA21791.1| bromodomain containing 2 [Pan troglodytes]
gi|410267652|gb|JAA21792.1| bromodomain containing 2 [Pan troglodytes]
gi|410303978|gb|JAA30589.1| bromodomain containing 2 [Pan troglodytes]
gi|410303980|gb|JAA30590.1| bromodomain containing 2 [Pan troglodytes]
gi|410354717|gb|JAA43962.1| bromodomain containing 2 [Pan troglodytes]
gi|410354719|gb|JAA43963.1| bromodomain containing 2 [Pan troglodytes]
Length = 800
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|114606788|ref|XP_001167666.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Pan
troglodytes]
Length = 753
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|4826806|ref|NP_005095.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|164419758|ref|NP_001106653.1| bromodomain-containing protein 2 isoform 1 [Homo sapiens]
gi|426352675|ref|XP_004043835.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Gorilla
gorilla gorilla]
gi|426352677|ref|XP_004043836.1| PREDICTED: bromodomain-containing protein 2 isoform 2 [Gorilla
gorilla gorilla]
gi|12230989|sp|P25440.2|BRD2_HUMAN RecName: Full=Bromodomain-containing protein 2; AltName:
Full=O27.1.1; AltName: Full=Really interesting new gene
3 protein
gi|577293|dbj|BAA07641.1| KIAA9001 [Homo sapiens]
gi|2980663|emb|CAA43996.1| FSH [Homo sapiens]
gi|52545950|emb|CAH56171.1| hypothetical protein [Homo sapiens]
gi|119624068|gb|EAX03663.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624069|gb|EAX03664.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|119624071|gb|EAX03666.1| bromodomain containing 2, isoform CRA_b [Homo sapiens]
gi|168277492|dbj|BAG10724.1| bromodomain-containing protein 2 [synthetic construct]
Length = 801
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|402866610|ref|XP_003897472.1| PREDICTED: bromodomain-containing protein 2 [Papio anubis]
Length = 804
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|297661251|ref|XP_002809176.1| PREDICTED: bromodomain-containing protein 2 isoform 3 [Pongo
abelii]
Length = 754
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|109070687|ref|XP_001115845.1| PREDICTED: hypothetical protein LOC717893 isoform 7 [Macaca
mulatta]
gi|109070689|ref|XP_001115854.1| PREDICTED: hypothetical protein LOC717893 isoform 8 [Macaca
mulatta]
Length = 802
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|15706263|emb|CAC69989.1| bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|426250128|ref|XP_004018790.1| PREDICTED: bromodomain-containing protein 2 [Ovis aries]
Length = 803
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|217074676|gb|ACJ85698.1| unknown [Medicago truncatula]
Length = 471
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 135/310 (43%), Gaps = 53/310 (17%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
W F PV+ L LHDY+++I+ PMD T+K+K+ Y E DV+L FKNA
Sbjct: 166 TWIFNTPVNATALNLHDYFDIIKHPMDLGTVKSKLAK---NAYSTPAEFADDVKLTFKNA 222
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------EKRQEEEEAK- 225
+ YN + DV+ A LLEKFEE + + K E+ E +E E+ K
Sbjct: 223 LTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVEPEREREKVKK 282
Query: 226 -----------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVIQKC------ 267
A+ L + A +N+ +L + +++ + +R ++
Sbjct: 283 KDNPIPIPPPVAKRQESLPEPASTSNQPSTSNPQLAQSPVRIPSPMRALPVKPLKQPKPK 342
Query: 268 ------RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSEL 321
R+M+ EEK LG L L PE + + ++I+ + N E++LDM+A
Sbjct: 343 ARDPNKREMNVEEKHKLGLGLQILPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDTE 402
Query: 322 TLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA 381
TLW L V K S+ +NNN SNK N P R+K DA
Sbjct: 403 TLWELDRLVTNWKKMVSKIKRQALMDNNN---------VPSNKGNGELPDREK--VDATP 451
Query: 382 KPAVKRTKKL 391
K+ KK+
Sbjct: 452 PSEGKKQKKI 461
>gi|395832114|ref|XP_003789121.1| PREDICTED: bromodomain-containing protein 2 isoform 1 [Otolemur
garnettii]
Length = 791
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 326 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 381
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 382 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 438
Query: 203 EKWLQL 208
++ ++
Sbjct: 439 FRYAKM 444
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 64 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 121
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ + Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 122 -ENSYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 167
>gi|178057339|ref|NP_001116557.1| bromodomain-containing protein 2 [Sus scrofa]
gi|147223324|emb|CAN13285.1| bromodomain containing 2 [Sus scrofa]
Length = 803
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 335 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 390
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 391 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 447
Query: 203 EKWLQL 208
++ ++
Sbjct: 448 FRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|119624070|gb|EAX03665.1| bromodomain containing 2, isoform CRA_c [Homo sapiens]
Length = 552
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 24/223 (10%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 262 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 318
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK--VMEEEKRQEEEEAKAQLDMQLTQEAV 237
KYN DV MA+ L + + L L + + + ++++E++E K + + A+
Sbjct: 319 CYKYNPPDHDVVAMARKLQLRAVHEQLAALSQGPISKPKRKREKKEKKKKRKAEKPPPAL 378
Query: 238 QTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIV 297
T E E R MS +EK+ L + +L E L + + I+
Sbjct: 379 PTGYDSEEEEE------------------SRPMSYDEKRQLSLDINKLPGEKLGRVVHII 420
Query: 298 AENNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
PS + +E+++D + TL L+ +V L+ R
Sbjct: 421 QAREPSLRDSNPEEIEIDFETLKPSTLRELERYVLSCLRKKPR 463
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|52545923|emb|CAH56179.1| hypothetical protein [Homo sapiens]
Length = 754
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|313747419|ref|NP_001186385.1| bromodomain-containing protein 2 isoform 3 [Homo sapiens]
gi|426352681|ref|XP_004043838.1| PREDICTED: bromodomain-containing protein 2 isoform 4 [Gorilla
gorilla gorilla]
gi|182769|gb|AAA68890.1| putative [Homo sapiens]
Length = 754
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|417404705|gb|JAA49093.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 799
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|166851651|gb|ABY91321.1| RING3 [Sus scrofa]
Length = 756
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 286 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 341
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 342 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 398
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 399 FEFRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|213983065|ref|NP_001135690.1| bromodomain containing 4 [Xenopus (Silurana) tropicalis]
gi|197245689|gb|AAI68637.1| Unknown (protein for MGC:186343) [Xenopus (Silurana) tropicalis]
Length = 1364
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A I R++ K +AWPF PVDV+ LGLHDY E+I+ PMD TIK KMD D
Sbjct: 380 RYCAGIIREMFSKKHQAYAWPFYKPVDVDALGLHDYREIIKHPMDLGTIKVKMDNWD--- 436
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y++ +E +DVRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 437 YKDAKEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRYAKM 482
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 22/172 (12%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R A R+ +L+ + + + +H++AWPF PVDV L L DY+++I+ PMD TIK
Sbjct: 54 RPSQAKRQTNQLQYLLKTVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKNPMDMGTIK 113
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
+++ Y N +E D +F N YN DD+ +MA++L E+ +LQ +
Sbjct: 114 KRLENH---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKI--- 163
Query: 213 MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 264
E QEE E VQ+ R E +E D + +R V+
Sbjct: 164 --SEMPQEETEL----------AVVQSKGRGRGRKEQSEQDTSITPMRTRVL 203
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 638 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 697
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 698 RELERYVTSCLR 709
>gi|60360108|dbj|BAD90273.1| mKIAA4005 protein [Mus musculus]
Length = 818
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 352 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 407
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 408 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 464
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 465 FEFRYAKM 472
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 92 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 149
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 150 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 195
>gi|297290567|ref|XP_001115810.2| PREDICTED: hypothetical protein LOC717893 isoform 2 [Macaca
mulatta]
Length = 755
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|2995269|emb|CAA15818.1| MMRING3.1.1 [Mus musculus]
gi|62945214|dbj|BAD97682.1| bromodomain-containing Brd2 protein [Mus musculus]
Length = 752
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 286 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 341
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 342 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 398
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 399 FEFRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|313747417|ref|NP_001186384.1| bromodomain-containing protein 2 isoform 2 [Homo sapiens]
gi|39645317|gb|AAH63840.1| BRD2 protein [Homo sapiens]
Length = 836
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|395533918|ref|XP_003768996.1| PREDICTED: bromodomain-containing protein 2-like [Sarcophilus
harrisii]
Length = 800
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 334 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 389
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 390 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 446
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 447 FEFRYAKM 454
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K + L+P
Sbjct: 131 -ENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMP 181
>gi|291396003|ref|XP_002714557.1| PREDICTED: bromodomain containing 2 [Oryctolagus cuniculus]
Length = 802
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|1370115|emb|CAA65450.1| kinase [Homo sapiens]
Length = 754
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 288 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 343
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 344 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 400
Query: 203 EKWLQL 208
++ ++
Sbjct: 401 FRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|126309678|ref|XP_001369391.1| PREDICTED: bromodomain-containing protein 2-like [Monodelphis
domestica]
Length = 801
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 334 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 389
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 390 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 446
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 447 FEFRYAKM 454
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK-----V 212
+ Y E D +F N YN DD+ +MA++L + F +K + L+P V
Sbjct: 131 -ENNYYWLASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK-VALMPSEEQELV 188
Query: 213 MEEEKRQEEEEAK-AQLDMQLTQ----EAVQTNKAKELRSELNEVDMQLENLRETVIQKC 267
+ K ++ AK A L LT AV + L S E+ + N+ +
Sbjct: 189 VTIPKNSHKKGAKLAALQSSLTNAHQVPAVSSLSHTPLYSPSPEIPTTVLNIPHGSV--- 245
Query: 268 RKMSTEEKKNLGTALTRL 285
+S+ K+L +A T L
Sbjct: 246 --ISSPLLKSLHSAGTPL 261
>gi|224473804|gb|ACN49148.1| bromodomain containing 2 [Oryzias dancena]
Length = 610
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 6/141 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ S ++ + R + +K D+ ++ R + + +++ K +A
Sbjct: 352 AKATSGSRRGVSGRPIKPPKKDLPDSILPTPVRRSKLSPQLRYCSGVLKELLSKKHAAYA 411
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I++PMD STIK KMD ++ YR+ ++ ADVRL+F N
Sbjct: 412 WPFYKPVDAVSLGLHDYHEIIKQPMDLSTIKRKMDSRE---YRDAQQFSADVRLMFSNCY 468
Query: 182 KYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 469 KYNPPDHDVVAMARKLQDVFE 489
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 72 GRMTNQLQFLQKVVLKSLWRHHFAWPFHEPVDAVKLSLPDYHKIIKTPMDMGTIKKRLEN 131
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
YR+ E D +F N YN DD+ +MA+SL + F +K Q L P
Sbjct: 132 NY---YRSASECMQDFNAMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQMPQEEIELAP 188
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEV-DMQLENLRETVIQKCRK 269
++ + ++ + L T V E D L +T++ KC
Sbjct: 189 PAPRSKQSKNLKKGRNILGGVTTAHQVPAVSQSVYSPPTPETPDSILSTPPQTILTKCST 248
Query: 270 MSTEEKKNLGTALTRLSP 287
+ + ++ + A+T L P
Sbjct: 249 PTLQPEQTI-PAITGLPP 265
>gi|444519083|gb|ELV12566.1| Bromodomain-containing protein 2 [Tupaia chinensis]
Length = 743
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY+++I
Sbjct: 275 QQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDII 330
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE
Sbjct: 331 KHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 387
Query: 203 EKWLQL 208
++ ++
Sbjct: 388 FRYAKM 393
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 76 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 133
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 134 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 179
>gi|345488357|ref|XP_001603224.2| PREDICTED: hypothetical protein LOC100119446 isoform 1 [Nasonia
vitripennis]
Length = 1549
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E ADVRL+F N
Sbjct: 408 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAADVRLIFTN 464
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MAK L + FE ++ ++
Sbjct: 465 CYKYNPPDHDVVAMAKKLQDVFEMRYAKI 493
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+ MD TIK ++
Sbjct: 57 GRVTNQLQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL-- 114
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ T Y + +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 115 -ENTYYWSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 164
>gi|324500947|gb|ADY40429.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 976
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
+M+ +R + +F + + + WPF+ PVDVEGL LHDYY+++++PMD TI+ KM+ K
Sbjct: 172 QMKYCQRIISELFSKKCK-SFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQ 230
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E+ D+ LV +N KYN D VH K+L + FEEKW Q+
Sbjct: 231 ---YASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 276
>gi|345488359|ref|XP_003425887.1| PREDICTED: hypothetical protein LOC100119446 isoform 3 [Nasonia
vitripennis]
Length = 1549
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E ADVRL+F N
Sbjct: 414 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAADVRLIFTN 470
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MAK L + FE ++ ++
Sbjct: 471 CYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+ MD TIK ++
Sbjct: 63 GRVTNQLQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL-- 120
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ T Y + +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 121 -ENTYYWSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|345488355|ref|XP_003425886.1| PREDICTED: hypothetical protein LOC100119446 isoform 2 [Nasonia
vitripennis]
gi|345488361|ref|XP_003425888.1| PREDICTED: hypothetical protein LOC100119446 isoform 4 [Nasonia
vitripennis]
Length = 1555
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y E ADVRL+F N
Sbjct: 414 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKVKMDKRE---YNTASEFAADVRLIFTN 470
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MAK L + FE ++ ++
Sbjct: 471 CYKYNPPDHDVVAMAKKLQDVFEMRYAKI 499
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+ MD TIK ++
Sbjct: 63 GRVTNQLQFLQKGVLKPLWKHQFAWPFQQPVDAKKLNLPDYHKIIKHSMDLGTIKKRL-- 120
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ T Y + +E D+ +F N YN +DV VMA++L F K Q+
Sbjct: 121 -ENTYYWSGKECVQDLNTMFTNCYVYNKPGEDVVVMAQTLERLFLTKVAQM 170
>gi|348541135|ref|XP_003458042.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 821
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R + + +++ K +AWPF PVD LGLHDY+++I++PMD STIK KMDG++
Sbjct: 391 RYCSGVLKELLSKKHAAYAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDGRE--- 447
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
YR + ADVRL+F N KYN DV MA+ L + FE
Sbjct: 448 YREAHQFSADVRLMFSNCYKYNPPDHDVVAMARKLQDVFE 487
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 74 GRMTNQLQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRL-- 131
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 132 -ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 181
>gi|413921385|gb|AFW61317.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 770
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 7/146 (4%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q A + + + H WA PF+ PVD+ L + DY++++++PMD TI+ +M K G Y
Sbjct: 174 KQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRM--KAGM-YST 230
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEE 222
E ADVRL F NAM YN +DVH+MAK+L + FE +W + LPK +E+ Q +E
Sbjct: 231 PPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKP-DEKPPQPDE 289
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSE 248
+ ++ ++ + N K + E
Sbjct: 290 KPPQPVEKPPVRKPTKKNSTKRVSIE 315
>gi|67972378|dbj|BAE02531.1| unnamed protein product [Macaca fascicularis]
Length = 776
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 286 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 341
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 342 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 398
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 399 FEFRYAKM 406
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|432847788|ref|XP_004066150.1| PREDICTED: uncharacterized protein LOC101159647 [Oryzias latipes]
Length = 1469
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGLHDY+++I+ PMD STIK K+D + YR+ +E ADVRL+F N
Sbjct: 452 YAWPFYKPVDAKALGLHDYHDIIKHPMDLSTIKKKLDNRQ---YRDAQEFAADVRLMFSN 508
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 509 CYKYNPPDHDVVSMARKLQDVFEMRFAKM 537
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
A R+ +L+ + + + +H +AWPF PVD LGL DYY++I+ PMD TIK +++
Sbjct: 35 AKRQTNQLQYLHKVVLKTLWKHHFAWPFQAPVDAVKLGLPDYYKIIKTPMDMGTIKKRLE 94
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y N +E D +F N YN DD+ +MA++L + F +K ++
Sbjct: 95 NN---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKITEM 143
>gi|324500843|gb|ADY40384.1| Bromodomain-containing protein 2 [Ascaris suum]
Length = 1194
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
+M+ +R + +F + + + WPF+ PVDVEGL LHDYY+++++PMD TI+ KM+ K
Sbjct: 374 QMKYCQRIISELFSKKCK-SFTWPFLEPVDVEGLKLHDYYDIVKQPMDLGTIRRKMEAKQ 432
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E+ D+ LV +N KYN D VH K+L + FEEKW Q+
Sbjct: 433 ---YASPEEMREDLLLVCENCFKYNPPSDPVHQHGKTLQKYFEEKWRQM 478
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + +HK AWPF PVD L L DY++VI++PMD +TI+ ++
Sbjct: 114 RHTNQLEFILKEVLKPAMRHKHAWPFTKPVDAVRLSLPDYHKVIKRPMDMNTIEKRL--- 170
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y + ++ D +F N K+N DDV +M K++ + EK ++LLP
Sbjct: 171 RNVYYYSAKDCMQDFEAIFANCYKFNQNEDDVSLMCKNIENLYREK-IKLLP 221
>gi|55725298|emb|CAH89514.1| hypothetical protein [Pongo abelii]
Length = 546
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|222422933|dbj|BAH19453.1| AT5G14270 [Arabidopsis thaliana]
Length = 549
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 17/234 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ +++ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-Y 193
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
E ADVRL F NAM YN +DV+VMA +L + FE +W L K+ + E
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSN 253
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTAL 282
A + + K K VD E V+ R M+ E++ LG L
Sbjct: 254 LDAHKEKHIVIPVPMAKKRKT-----TAVDC------ENVVDPAKRVMTDEDRLKLGKDL 302
Query: 283 TRLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 335
L+ E + + + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 303 ESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|15219397|ref|NP_177458.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
gi|75194105|sp|Q9S7T1.1|GTE3_ARATH RecName: Full=Transcription factor GTE3, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE3; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E3;
Flags: Precursor
gi|5903104|gb|AAD55662.1|AC008017_35 Highly similar to non intermediate filament IFA binding protein
[Arabidopsis thaliana]
gi|12324313|gb|AAG52122.1|AC010556_4 hypothetical protein; 61711-63380 [Arabidopsis thaliana]
gi|56236042|gb|AAV84477.1| At1g73150 [Arabidopsis thaliana]
gi|332197298|gb|AEE35419.1| bromodomain-containing protein GTE3 [Arabidopsis thaliana]
Length = 461
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 47/303 (15%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
AA + ++ + + ++ +HK W F PVDV LGLHDY+ +I++PMD T+K ++
Sbjct: 111 AADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLGTVKTRL 170
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL------- 208
+ Y++ E DVRL F NAM YN DV+ MA+ LL FEEKW+ L
Sbjct: 171 ---SKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQYELL 227
Query: 209 -------------------------LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 243
LP K + L + TN K
Sbjct: 228 IRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVK 287
Query: 244 ELRSELNEVDMQLENLRETVIQKC---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 300
L + E ++++ R ++ +EK+ L L L + L ++I+ +
Sbjct: 288 P---------AVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKR 338
Query: 301 NPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKD 360
P E++LD+D+ TLW L FV E ++ S+ + G ++ + + +N
Sbjct: 339 TPELSQQDDEIELDIDSLDLETLWELFRFVTEYKESLSKKKEEQGLDSERDAESFHNSVH 398
Query: 361 NSN 363
SN
Sbjct: 399 ESN 401
>gi|66912019|gb|AAH97528.1| LOC443648 protein, partial [Xenopus laevis]
Length = 572
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A+I R++ K +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D
Sbjct: 373 RYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD--- 429
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y+ +E +DVRL+F N KYN +V +MA+ L + FE ++ ++ E E
Sbjct: 430 YKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM---------PDEPE 480
Query: 223 EAKAQL 228
EA A +
Sbjct: 481 EAPAPV 486
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R R+ +L+ A+ + + +H++AWPF PVDV L L DY+++I+ PMD TIK
Sbjct: 52 RPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIK 111
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+++ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 112 KRLENH---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|74190894|dbj|BAE28228.1| unnamed protein product [Mus musculus]
Length = 473
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLKKIFLQK 175
>gi|432094627|gb|ELK26133.1| Bromodomain-containing protein 2 [Myotis davidii]
Length = 881
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 417 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 472
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 473 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 529
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 530 FEFRYAKM 537
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK +++
Sbjct: 157 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLEN 216
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 217 NY---YWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 260
>gi|2780775|dbj|BAA24377.1| Ring3 [Mus musculus]
Length = 549
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|49118460|gb|AAH73443.1| LOC443648 protein, partial [Xenopus laevis]
Length = 559
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 15/126 (11%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A+I R++ K +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ +D
Sbjct: 373 RYCASIIREMFSKKHQAYAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRD--- 429
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y+ +E +DVRL+F N KYN +V +MA+ L + FE ++ ++ E E
Sbjct: 430 YKEAQEFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM---------PDEPE 480
Query: 223 EAKAQL 228
EA A +
Sbjct: 481 EAPAPV 486
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R R+ +L+ A+ + + +H++AWPF PVDV L L DY+++I+ PMD TIK
Sbjct: 52 RPNQPKRQTNQLQYLLKAVLKTLWKHQFAWPFQLPVDVVKLNLPDYHKIIKTPMDMGTIK 111
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+++ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 112 KRLENH---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|159491100|ref|XP_001703511.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158280435|gb|EDP06193.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 429
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 12/211 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
R ++ +++ + + I QHKWA+PF PVD DY +V+ PMDFST++N+ +
Sbjct: 83 ARLVEIVQKHCSQALKAIMQHKWAFPFNTPVDTSRF--VDYLKVVATPMDFSTVRNRTEA 140
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEE 216
YR+ ++ ++DV LVF NA +YN D H+MA++L E EEK+ +L+ P++ EE
Sbjct: 141 GY---YRDPKDWWSDVMLVFSNAKRYNAPGSDCHLMAQTLQEVSEEKYEKLIAPRLAEEA 197
Query: 217 KRQEEEEA-----KAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 271
+ EE +A+L +A+ + L + E+ + + C ++
Sbjct: 198 AVTQREELHLRKRRAELANGQVADAMDA-QCGMLFGLMAELHAAIREAKSMAASLCEPLT 256
Query: 272 TEEKKNLGTALTRLSPEDLCKALEIVAENNP 302
EEK+ L + L L + VA +P
Sbjct: 257 LEEKQALAATIQGLPTAQLESIVAFVASRHP 287
>gi|133777453|gb|AAI14644.1| BRD2 protein [Bos taurus]
Length = 558
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 333 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 388
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 389 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 445
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 446 FEFRYAKM 453
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 73 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 130
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 131 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 176
>gi|123233748|emb|CAM17899.1| bromodomain containing 2 [Mus musculus]
Length = 473
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|12802525|gb|AAK07919.1|AF318183_1 ring 3 [Mus musculus]
Length = 503
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 332 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 387
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 388 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 444
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 445 FEFRYAKM 452
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 130 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 175
>gi|307182453|gb|EFN69688.1| Homeotic protein female sterile [Camponotus floridanus]
Length = 1541
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+KPMD T+K KMD + Y+ E +DVRL+F N
Sbjct: 454 YAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKAKMDNRQ---YKTAHEFASDVRLIFTN 510
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 511 CYKYNPPDHDVVSMARKLQDIFEMRYAKV 539
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++
Sbjct: 88 GRITNQLQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL-- 145
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 146 -ENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 195
>gi|7573452|emb|CAB87766.1| kinase-like protein [Arabidopsis thaliana]
Length = 703
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 17/234 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ +++ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-Y 193
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
E ADVRL F NAM YN +DV+VMA +L + FE +W L K+ + E
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSN 253
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTAL 282
A + + K K VD E V+ R M+ E++ LG L
Sbjct: 254 LDAHKEKHIVIPVPMAKKRKT-----TAVDC------ENVVDPAKRVMTDEDRLKLGKDL 302
Query: 283 TRLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 335
L+ E + + + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 303 ESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|15238195|ref|NP_196617.1| global transcription factor group E2 [Arabidopsis thaliana]
gi|7671448|emb|CAB89388.1| bromodomain protein-like [Arabidopsis thaliana]
gi|332004179|gb|AED91562.1| global transcription factor group E2 [Arabidopsis thaliana]
Length = 678
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKW+W F++PVDV GLGLHDY+ +++KPMD T+ KM+ + G YR+ +
Sbjct: 256 ILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTV--KMNLEKGL-YRSPIDFA 312
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+DVRL F NAM YN + DV++MA+ LL +F+
Sbjct: 313 SDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFD 344
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+M+ +EK LG L L PE L + ++I+ + E++LD++A TLW L
Sbjct: 472 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 531
Query: 328 VFVQESLKAASR 339
FV K AS+
Sbjct: 532 RFVTNYRKMASK 543
>gi|2780777|dbj|BAA24378.1| Ring3 [Mus musculus]
gi|2780779|dbj|BAA24379.1| Ring3 [Mus musculus]
Length = 503
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 286 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 341
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 342 IIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 398
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 399 FEFRYAKM 406
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 84 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 129
>gi|432868098|ref|XP_004071410.1| PREDICTED: uncharacterized protein LOC101158947 [Oryzias latipes]
Length = 1443
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 6/103 (5%)
Query: 109 AAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
AA+ R++ K +AWPF PVDV+ LGLHDY+++I+ PMD STIK K++ + YR+
Sbjct: 361 AALVREMLSKKHAAYAWPFYKPVDVDALGLHDYHDIIKHPMDLSTIKAKLENRQ---YRD 417
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 418 PQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 460
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H ++WPF PVD L L DYY +I PMD TIK ++
Sbjct: 37 RQTNQLQYLLKVVVKALWKHHFSWPFQAPVDAIKLNLPDYYTIIHTPMDLGTIKKRL--- 93
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ + Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 94 ENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQK 139
>gi|198469092|ref|XP_002134216.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
gi|198146712|gb|EDY72843.1| GA26201 [Drosophila pseudoobscura pseudoobscura]
Length = 1981
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 505 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 561
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 562 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 590
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + I +H +AWPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 33 GRNTNQLQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLEN 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y + +E D +F N YN +DV VMA++L + F +K ++ +PK EE
Sbjct: 93 NY---YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IETMPK---EEL 145
Query: 218 RQEEEEAKA 226
E AK
Sbjct: 146 ELEPATAKG 154
>gi|449674634|ref|XP_002169264.2| PREDICTED: bromodomain-containing protein 4-like [Hydra
magnipapillata]
Length = 1019
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R + GR +L+ + RQI +H++AWPF PVD L + DYYE+ ++PMDF TIK
Sbjct: 8 RAQKKGRTTNQLQFLLKTVMRQIQRHQFAWPFAKPVDAVKLKIPDYYEITKRPMDFGTIK 67
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
K++ D Y +E + +LVF N YN +D+ +MA+ +LEKF ++ L ++P
Sbjct: 68 KKLEHND---YTCAKECIEEFKLVFTNCYGYNKPGEDIVIMAE-VLEKFFDEKLSMMP 121
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PV E LGLHDY+++I+KPMD T+K KMD ++ Y + + DVRL+F N
Sbjct: 320 YAWPFYKPVQAEALGLHDYFDIIKKPMDLGTVKFKMDCRE---YSSPSDFATDVRLIFTN 376
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE K+ ++
Sbjct: 377 CYKYNPPDHDVVKMARKLQDVFEYKFAKM 405
>gi|413921384|gb|AFW61316.1| hypothetical protein ZEAMMB73_074233 [Zea mays]
Length = 558
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 7/146 (4%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q A + + + H WA PF+ PVD+ L + DY++++++PMD TI+ +M K G Y
Sbjct: 174 KQCANLLKSLMSHVWASPFLVPVDIVKLNIPDYFQIVKQPMDLGTIQKRM--KAGM-YST 230
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQEEE 222
E ADVRL F NAM YN +DVH+MAK+L + FE +W + LPK +E+ Q +E
Sbjct: 231 PPEFAADVRLTFSNAMNYNPANNDVHLMAKTLSKNFESRWKLIEKKLPKP-DEKPPQPDE 289
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSE 248
+ ++ ++ + N K + E
Sbjct: 290 KPPQPVEKPPVRKPTKKNSTKRVSIE 315
>gi|327488240|sp|Q9LXA7.2|GTE2_ARATH RecName: Full=Transcription factor GTE2; AltName:
Full=Bromodomain-containing protein GTE2; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E2
Length = 581
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKW+W F++PVDV GLGLHDY+ +++KPMD T+ KM+ + G YR+ +
Sbjct: 181 ILVKLMKHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTV--KMNLEKGL-YRSPIDFA 237
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+DVRL F NAM YN + DV++MA+ LL +F+
Sbjct: 238 SDVRLTFTNAMSYNPKGQDVYLMAEKLLSQFD 269
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+M+ +EK LG L L PE L + ++I+ + E++LD++A TLW L
Sbjct: 397 REMTMDEKGKLGVNLQELPPEKLGQLIQILRKRTRDLPQDGDEIELDIEALDNETLWELD 456
Query: 328 VFVQESLKAASR 339
FV K AS+
Sbjct: 457 RFVTNYRKMASK 468
>gi|327290160|ref|XP_003229792.1| PREDICTED: bromodomain-containing protein 2-like [Anolis
carolinensis]
Length = 794
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 66 KSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAW 122
K+ I + R + K D+ + + ++ E + I +++ K +AW
Sbjct: 317 KAAKIPARRESGRPIKPPRKDLPDSQQHQTSKRGKLSEQLKYCNGILKELVSKKHAAYAW 376
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
PF PVD LGLHDY+E+I+ PMD STIK KM+ +D YR+ +E +DVRL+F N K
Sbjct: 377 PFYKPVDASALGLHDYHEIIKYPMDLSTIKRKMENRD---YRDAQEFASDVRLMFSNCYK 433
Query: 183 YNDERDDVHVMAKSLLEKFEEKWLQL 208
YN DV MA+ L + FE + ++
Sbjct: 434 YNPPDHDVVAMARKLQDVFEFSYAKM 459
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 70 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 127
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 128 -ENNYYWSSAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQM 177
>gi|334187679|ref|NP_001190308.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|332004628|gb|AED92011.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 689
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 17/234 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ +++ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-Y 193
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
E ADVRL F NAM YN +DV+VMA +L + FE +W L K+ + E
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSN 253
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTAL 282
A + + K K VD E V+ R M+ E++ LG L
Sbjct: 254 LDAHKEKHIVIPVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDL 302
Query: 283 TRLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 335
L+ E + + + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 303 ESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|149034725|gb|EDL89462.1| bromodomain containing 4, isoform CRA_a [Rattus norvegicus]
Length = 915
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN 117
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 118 Y---YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|110736040|dbj|BAE99992.1| hypothetical protein [Arabidopsis thaliana]
Length = 461
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 47/303 (15%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
AA + ++ + + ++ +HK W F PVDV LGLHDY+ +I++PMD T+K ++
Sbjct: 111 AADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDLETVKTRL 170
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL------- 208
+ Y++ E DVRL F NAM YN DV+ MA+ LL FEEKW+ L
Sbjct: 171 ---SKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEKWVPLETQYELL 227
Query: 209 -------------------------LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK 243
LP K + L + TN K
Sbjct: 228 IRKQQPVRDIDFHAPVSTNTHNVEALPLPAPTPSLSPPPPPKVVENRTLERAESMTNPVK 287
Query: 244 ELRSELNEVDMQLENLRETVIQKC---RKMSTEEKKNLGTALTRLSPEDLCKALEIVAEN 300
L + E ++++ R ++ +EK+ L L L + L ++I+ +
Sbjct: 288 ---------PAVLPVVPEKLVEEASANRDLTFDEKRQLSEDLQDLPYDKLEAVVQIIKKR 338
Query: 301 NPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKD 360
P E++LD+D+ TLW L FV E ++ S+ + G ++ + + +N
Sbjct: 339 TPELSQQDDEIELDIDSLDLETLWELFRFVTEYKESLSKKKEEQGLDSERDAESFHNSVH 398
Query: 361 NSN 363
SN
Sbjct: 399 ESN 401
>gi|363747028|ref|XP_003643891.1| PREDICTED: bromodomain-containing protein 4-like [Gallus gallus]
Length = 1354
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 8/151 (5%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P KS + + R V +K D+ H E + + ++LK + I +++ K
Sbjct: 326 PTEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKY-CSGIIKEMFAKKH 384
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 385 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAADVRLMF 441
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 442 SNCYKYNPADHEVVAMARKLQDVFEMRFAKM 472
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 76 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN- 134
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 135 --NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 186
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 621 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 680
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 681 RELERYVTSCLR 692
>gi|18417335|ref|NP_568297.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
gi|75163656|sp|Q93YS6.1|GTE9_ARATH RecName: Full=Transcription factor GTE9; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 9; Short=AtBET9;
AltName: Full=Bromodomain-containing protein GTE9;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E9
gi|16604681|gb|AAL24133.1| putative kinase [Arabidopsis thaliana]
gi|332004627|gb|AED92010.1| bromodomain and extraterminal domain protein 9 [Arabidopsis
thaliana]
Length = 688
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 115/234 (49%), Gaps = 17/234 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ +++ H++ W F PVDV L + DY+ VIE PMD T+KNK+ GT Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKL--TSGT-Y 193
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
E ADVRL F NAM YN +DV+VMA +L + FE +W L K+ + E
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSN 253
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC-RKMSTEEKKNLGTAL 282
A + + K K VD E V+ R M+ E++ LG L
Sbjct: 254 LDAHKEKHIVIPVPMAKKRK-----TTAVDC------ENVVDPAKRVMTDEDRLKLGKDL 302
Query: 283 TRLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 335
L+ E + + + ++N + E+++D++ S+ L++L+ + E L+
Sbjct: 303 ESLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSDHALFQLRDLLDEHLR 355
>gi|242077236|ref|XP_002448554.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
gi|241939737|gb|EES12882.1| hypothetical protein SORBIDRAFT_06g028960 [Sorghum bicolor]
Length = 458
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 11/246 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ I ++ + K + F PV+VE LGLHDY+ VI++PMD T+K +G Y
Sbjct: 115 MRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHTVIKRPMDLGTVK---EGLAAGRY 171
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ + ADVRL F NA++YN +VH A +LL FE + + L EEE R E
Sbjct: 172 ASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEALAN-FEEECRSLEPP 230
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
+ + ++L +++ V M+ RE R+MS EEK L L
Sbjct: 231 PR-PVAVELPPPPAAEPVEAKVKPRAGNVRMRKPKAREP---NKREMSLEEKNMLRIGLE 286
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ---ESLKAASRS 340
L E + L+IV + N + E++LD+D T W L FV ++LK + R+
Sbjct: 287 SLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVTNFNKALKKSQRA 346
Query: 341 SGDMGG 346
+ GG
Sbjct: 347 AMMNGG 352
>gi|297734375|emb|CBI15622.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 111/230 (48%), Gaps = 53/230 (23%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + ++ H++ W F +PVDV L + DY+ VI+ PMD TIK+KM + Y
Sbjct: 160 LMKQCETLLSRLMTHQFGWIFNNPVDVVELKIPDYFTVIKHPMDLGTIKSKMASGE---Y 216
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQE 220
+ + ADVRL F NAM YN +DVH MA++L + FE +W + LPKV
Sbjct: 217 LSPFDFAADVRLTFSNAMTYNPRGNDVHFMAETLNKFFEMRWKPIEKKLPKV-------- 268
Query: 221 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 280
A D ++ E NK R M+ EE+ NLGT
Sbjct: 269 -----APTDHKIKMEP---NK--------------------------RIMTKEERHNLGT 294
Query: 281 ALTRL---SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
L L P+D+ L+ + N A+ E+++D+DA S+ TL+ L+
Sbjct: 295 ELETLLGELPDDIVDFLKEQSFNE--NQASEDEIEIDIDALSDDTLFTLR 342
>gi|159507460|gb|ABW97743.1| bromodomain 4 [Xenopus laevis]
Length = 1366
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A I R++ K +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ D
Sbjct: 372 RYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCD--- 428
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y+N ++ +DVRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 429 YKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R R+ +L+ + + + +H++AWPF PVDV L L DYY++I+ PMD TIK
Sbjct: 51 RPNQPKRQTNQLQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIK 110
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+++ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 111 KRLENH---FYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 159
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 689
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 690 RELERYVTSCLR 701
>gi|148232443|ref|NP_001086546.1| bromodomain containing 4 [Xenopus laevis]
gi|49899749|gb|AAH76786.1| Brd4-prov protein [Xenopus laevis]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A I R++ K +AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ D
Sbjct: 372 RYCAGIVREMFSKKHQAYAWPFYKPVDVETLGLHDYCEIIKHPMDLGTIKVKMENCD--- 428
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y+N ++ +DVRL+F N KYN +V +MA+ L + FE ++ ++
Sbjct: 429 YKNAQDFASDVRLMFSNCYKYNPPDHEVVIMARKLQDVFEMRFAKM 474
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R R+ +L+ + + + +H++AWPF PVDV L L DYY++I+ PMD TIK
Sbjct: 51 RPNQPKRQTNQLQYLLKTVLKTLWKHQFAWPFQVPVDVVKLNLPDYYKIIKTPMDMGTIK 110
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+++ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 111 KRLENH---FYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 159
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
Q+CR MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 QRCRPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 689
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 690 RELERYVTSCLR 701
>gi|157453|gb|AAA28540.1| 7.6 kb fsh membrane protein [Drosophila melanogaster]
Length = 2038
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 499 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 555
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 556 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|340729450|ref|XP_003403016.1| PREDICTED: homeotic protein female sterile-like, partial [Bombus
terrestris]
Length = 497
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y+ +E +DVRL+F N
Sbjct: 34 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRE---YKTAQEFASDVRLIFTN 90
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 91 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 119
>gi|332026521|gb|EGI66642.1| Bromodomain-containing protein 2 [Acromyrmex echinatior]
Length = 1559
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD + Y+ E +DVRL+F N
Sbjct: 470 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKTKMDNRQ---YKTAHEFASDVRLIFTN 526
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 527 CYKYNPPDHDVVSMARKLQDIFEMRYAKV 555
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++
Sbjct: 103 GRITNQLQFLQKGVLKPVWKHQFAWPFQQPVDAKKLSLPDYHKIIKKPMDLGTIKKRL-- 160
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 161 -ENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 210
>gi|426387578|ref|XP_004060242.1| PREDICTED: bromodomain-containing protein 4 [Gorilla gorilla
gorilla]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|24640482|ref|NP_511078.2| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
gi|68067442|sp|P13709.2|FSH_DROME RecName: Full=Homeotic protein female sterile; AltName:
Full=Fragile-chorion membrane protein
gi|22831925|gb|AAF46312.3| female sterile (1) homeotic, isoform B [Drosophila melanogaster]
Length = 2038
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 499 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 555
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 556 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|397484965|ref|XP_003813634.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Pan paniscus]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|332253606|ref|XP_003275928.1| PREDICTED: bromodomain-containing protein 4 isoform 1 [Nomascus
leucogenys]
Length = 1364
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|19718731|ref|NP_490597.1| bromodomain-containing protein 4 isoform long [Homo sapiens]
gi|20141192|sp|O60885.2|BRD4_HUMAN RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Protein HUNK1
gi|16589003|gb|AAL26987.1|AF386649_1 bromodomain-containing 4 [Homo sapiens]
gi|119604879|gb|EAW84473.1| bromodomain containing 4, isoform CRA_d [Homo sapiens]
Length = 1362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|449492943|ref|XP_004159148.1| PREDICTED: transcription factor GTE9-like [Cucumis sativus]
Length = 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + +++ H++AW F PVDV L L DY+ +I+ PMD T+K+K+ Y
Sbjct: 136 LMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSG---AY 192
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ + ADVRL F NAM YN +DVHVMA L F+ +W + K+ + + +
Sbjct: 193 SSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPKTDGHSLPTK 252
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
++ + D++ T + V K K + S EV T I M+ EEK +LG L
Sbjct: 253 SRPREDVE-TVKNVPLKKMK-VASRPQEV---------TPIPSKLVMTDEEKLSLGRELE 301
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 327
L E ++ + E + + E ++D+D S+ TL++L+
Sbjct: 302 SLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLR 346
>gi|354485151|ref|XP_003504747.1| PREDICTED: bromodomain-containing protein 4 [Cricetulus griseus]
Length = 721
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L E FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|344239383|gb|EGV95486.1| Bromodomain-containing protein 4 [Cricetulus griseus]
Length = 723
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L E FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQEVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|297703913|ref|XP_002828869.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Pongo
abelii]
Length = 1363
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|330414421|gb|AEC13624.1| bromodomain containing protein 2 [Ginglymostoma cirratum]
gi|339895692|dbj|BAK52515.1| bromodomain containing 2 [Ginglymostoma cirratum]
Length = 783
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 6/153 (3%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
SK+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 317 SKAAKIPVRRESGRPIKPPKKDLPDSQQHQSSKKGKLSEQLKYCNGILKELLSKKHAAYA 376
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD + LGLHDY+++I+ PMD STIK KMD ++ Y++ +E ADVRL+F N
Sbjct: 377 WPFYKPVDAKALGLHDYHDIIKHPMDLSTIKRKMDERE---YQDAQEFAADVRLMFSNCY 433
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 214
KYN DV MA+ L + FE ++ ++ + ME
Sbjct: 434 KYNPPDHDVVAMARKLQDVFEFRFAKMPDEPME 466
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR +++ + + + +H++AWPF PVD L L DY+++I++PMD TIK ++
Sbjct: 82 PGRVTNQVQYMQKVLMKALWKHQFAWPFYQPVDAVKLSLPDYHKIIKQPMDMGTIKKRL- 140
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 141 --ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKLFLQKVAQM 190
>gi|348552081|ref|XP_003461857.1| PREDICTED: bromodomain-containing protein 4-like [Cavia porcellus]
Length = 1373
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|195480258|ref|XP_002101200.1| GE17489 [Drosophila yakuba]
gi|194188724|gb|EDX02308.1| GE17489 [Drosophila yakuba]
Length = 2036
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 498 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 554
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 555 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 583
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|442615454|ref|NP_001259321.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
gi|440216522|gb|AGB95166.1| female sterile (1) homeotic, isoform G [Drosophila melanogaster]
Length = 2046
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 499 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 555
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 556 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|194897170|ref|XP_001978604.1| GG17589 [Drosophila erecta]
gi|190650253|gb|EDV47531.1| GG17589 [Drosophila erecta]
Length = 2024
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 496 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 552
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 553 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 581
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|291413178|ref|XP_002722853.1| PREDICTED: bromodomain-containing protein 4 [Oryctolagus cuniculus]
Length = 1346
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|84579095|dbj|BAE72981.1| hypothetical protein [Macaca fascicularis]
Length = 617
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 206 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 265
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 266 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 322
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 323 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 353
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 501 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 560
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 561 ELERYVTSCLR 571
>gi|403308909|ref|XP_003944882.1| PREDICTED: bromodomain-containing protein 4 [Saimiri boliviensis
boliviensis]
Length = 1334
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 396 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 452
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 453 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 481
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 82 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 138
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 139 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 184
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 630 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 689
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 690 ELERYVTSCLR 700
>gi|74184776|dbj|BAE27987.1| unnamed protein product [Mus musculus]
Length = 1401
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 374 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 430
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 431 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 459
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 608 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 667
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 668 ELERYVTSCLR 678
>gi|384254936|gb|AFH75302.1| BRD2 [Lyrurus tetrix]
Length = 779
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 307 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 366
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 367 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 423
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 424 KYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 130 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 181
>gi|50400639|sp|Q9ESU6.1|BRD4_MOUSE RecName: Full=Bromodomain-containing protein 4; AltName:
Full=Mitotic chromosome-associated protein; Short=MCAP
gi|9931486|gb|AAG02191.1|AF273217_1 cell proliferation related protein CAP [Mus musculus]
Length = 1400
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|169730373|gb|ACA64774.1| bromodomain-containing protein 2 [Meleagris gallopavo]
Length = 779
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 307 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 366
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 367 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 423
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 424 KYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 130 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 181
>gi|226342873|ref|NP_065254.3| bromodomain-containing protein 4 isoform 1 [Mus musculus]
gi|148708379|gb|EDL40326.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
gi|148708382|gb|EDL40329.1| bromodomain containing 4, isoform CRA_a [Mus musculus]
Length = 1400
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|18308125|gb|AAL67833.1|AF461395_1 bromodomain-containing protein BRD4 long variant [Mus musculus]
Length = 1400
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|213512228|ref|NP_001094373.1| bromodomain containing 4 [Rattus norvegicus]
Length = 1403
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|332253608|ref|XP_003275929.1| PREDICTED: bromodomain-containing protein 4 isoform 2 [Nomascus
leucogenys]
Length = 722
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|402904600|ref|XP_003915131.1| PREDICTED: bromodomain-containing protein 4 [Papio anubis]
Length = 1300
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|297807455|ref|XP_002871611.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
gi|297317448|gb|EFH47870.1| ATBET9 [Arabidopsis lyrata subsp. lyrata]
Length = 690
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 117/233 (50%), Gaps = 15/233 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ +++ H++ W F PVDV L + DY+ VI+ PMD T+KNK+ GT Y
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIKHPMDLGTVKNKL--TSGT-Y 193
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
E ADVRL F NAM YN +DV VMA +L + FE +W L K+ + E
Sbjct: 194 SCPSEFAADVRLTFSNAMTYNPPGNDVFVMADTLRKFFEVRWKTLEKKLSGIKVHTEPSN 253
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
+ A + + K K + VD EN+ E V R M+ E++ LG L
Sbjct: 254 SDAHEEKHIVIPVPMAKKRKT-----SAVD--CENVSEPVK---RVMTDEDRLKLGKDLE 303
Query: 284 RLSPEDLCKALEIVAENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQESLK 335
L+ E + + + ++N + E+++D++ S L++L+ + E L+
Sbjct: 304 SLT-EFPAQLINFLRDHNSNEGGIGDDEIEIDINDLSHHALFQLRDLLDEHLR 355
>gi|194223682|ref|XP_001914731.1| PREDICTED: bromodomain-containing protein 4 [Equus caballus]
Length = 1364
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 664
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 665 RELERYVTSCLR 676
>gi|383417065|gb|AFH31746.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
gi|387541550|gb|AFJ71402.1| bromodomain-containing protein 4 isoform short [Macaca mulatta]
Length = 721
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|297466946|ref|XP_002704782.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
Length = 1368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|297476378|ref|XP_002688607.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
[Bos taurus]
gi|296486110|tpg|DAA28223.1| TPA: bromodomain containing 4 [Bos taurus]
Length = 1368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|189241564|ref|XP_967957.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1321
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+KPMD T+K KMD ++ YR+ +E ADVRL+F N
Sbjct: 382 YAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNRE---YRSAQEFAADVRLIFTN 438
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE K+ ++
Sbjct: 439 CYKYNPSDHDVVAMARKLQDVFEVKFAKI 467
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I++PMD TIK ++
Sbjct: 33 GRITNQLQFLQKTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
D Y + +E D +F N YN +DV VMA++L + F K
Sbjct: 91 -DNNYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLTK 136
>gi|3184498|gb|AAC27978.1| R31546_1 [Homo sapiens]
Length = 731
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 321 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 380
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 381 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 437
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 438 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 69 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 125
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 126 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 617 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 676
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 677 ELERYVTSCLR 687
>gi|444732332|gb|ELW72633.1| Bromodomain testis-specific protein [Tupaia chinensis]
Length = 556
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 119/235 (50%), Gaps = 32/235 (13%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 245 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKRKMDNQE---YKDAYEFAADVRLMFMN 301
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV------------------MEEEKRQEE 221
KYN +V MA+ L K + LQ+L +V + R +
Sbjct: 302 CYKYNPPDHEVVSMARMLQLKAVHQQLQVLSQVPFRKLKKKNEKSKREKKKAKVTNRDDN 361
Query: 222 EEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
KA+ M+L +E Q+N+ K+ + ++ + +N + M+ +EK+ L
Sbjct: 362 PRKKAK-QMKL-KEKPQSNQPKKRKQQVFALKSDEDN--------AKPMNYDEKRKLSLD 411
Query: 282 LTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+ +L + L + + I+ PS ++ E+++D + TL L+ +V L+
Sbjct: 412 INKLPGDKLGRVVHIIQSREPSLRNSNPDEIEIDFETLKASTLRELEKYVAACLR 466
>gi|195457098|ref|XP_002075425.1| GK15212 [Drosophila willistoni]
gi|194171510|gb|EDW86411.1| GK15212 [Drosophila willistoni]
Length = 2114
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 545 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 601
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 602 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 630
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 95 EAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PMD TIK +
Sbjct: 71 ERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKR 130
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
++ Y + +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 131 LENNY---YWSAKEAILDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 183
>gi|7657218|ref|NP_055114.1| bromodomain-containing protein 4 isoform short [Homo sapiens]
gi|3115204|emb|CAA72780.1| HUNKI [Homo sapiens]
gi|119604875|gb|EAW84469.1| bromodomain containing 4, isoform CRA_a [Homo sapiens]
gi|410224242|gb|JAA09340.1| bromodomain containing 4 [Pan troglodytes]
gi|410259614|gb|JAA17773.1| bromodomain containing 4 [Pan troglodytes]
gi|410299992|gb|JAA28596.1| bromodomain containing 4 [Pan troglodytes]
Length = 722
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|432109400|gb|ELK33657.1| Bromodomain-containing protein 4 [Myotis davidii]
Length = 1183
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 369 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 425
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 426 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 454
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 603 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 662
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 663 ELERYVTSCLR 673
>gi|395847805|ref|XP_003796555.1| PREDICTED: bromodomain-containing protein 4 [Otolemur garnettii]
Length = 1366
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|321456065|gb|EFX67182.1| hypothetical protein DAPPUDRAFT_302185 [Daphnia pulex]
Length = 754
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 63 NTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGR-RMQELKRQFAAIFRQITQHK-- 119
+ K I+ + R + + K D + + R +++E + I +++ K
Sbjct: 310 SAGKVAKISSRRESGRQIKKVVKDLPDTLPQHHSKPRDKLRESTKACNEILKELFSKKHS 369
Query: 120 -WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
+AWPF PVD LGLHDY+++I+KPMD T+K KMDG++ YR+ E +DVR++F
Sbjct: 370 GYAWPFYKPVDAGLLGLHDYHDIIKKPMDLGTVKAKMDGRE---YRSAAEFASDVRMIFT 426
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN DV MA+ L + FE ++ ++
Sbjct: 427 NCYKYNPPDHDVVAMARKLQDVFEMRYAKI 456
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD + LGL DY+++I+ PMD T+K ++
Sbjct: 75 GRCTNQLQYIQKFVMKAVWKHSFAWPFHQPVDAKKLGLPDYFKIIKYPMDLGTVKKRL-- 132
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D +F N YN +DV +MA++L + F K Q+
Sbjct: 133 -ENNYYWSAKECIQDFNTMFTNCYVYNKPGEDVVLMAQTLEKLFLTKVAQM 182
>gi|325652134|ref|NP_001191701.1| bromodomain-containing protein 4 [Sus scrofa]
gi|321172828|gb|ADW77216.1| bromodomain-containing protein 4 [Sus scrofa]
Length = 1368
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KCR MS +EK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCRPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|281343180|gb|EFB18764.1| hypothetical protein PANDA_018131 [Ailuropoda melanoleuca]
Length = 1230
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|395513633|ref|XP_003761027.1| PREDICTED: bromodomain-containing protein 4 [Sarcophilus harrisii]
Length = 1379
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK-- 119
P KS + + R V +K D+ ++ E + I +++ K
Sbjct: 332 PTEPKSTKLGPRRESSRPVKPPKKDVPDSQQHTVEKSNKVSEQLKYCTGIIKEMFAKKHA 391
Query: 120 -WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 392 AYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLETRE---YRDAQEFAADVRLMFS 448
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 449 NCYKYNPPDHEVVAMARKLQDVFEMRFAKM 478
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y N E D +F N YN DD+ +MA++L + F +K +L P
Sbjct: 115 ENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISELPP 166
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 627 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 686
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 687 ELERYVTSCLR 697
>gi|449455878|ref|XP_004145677.1| PREDICTED: transcription factor GTE8-like [Cucumis sativus]
Length = 750
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + +++ H++AW F PVDV L L DY+ +I+ PMD T+K+K+ Y
Sbjct: 185 LMKQCEQLLKRVMSHQYAWVFNTPVDVVKLNLPDYFTIIKHPMDLGTVKSKLSSG---AY 241
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ + ADVRL F NAM YN +DVHVMA L F+ +W + K+ + + +
Sbjct: 242 SSPLDFLADVRLTFSNAMTYNPPGNDVHVMADVLNSYFDMRWKAIEKKLPKTDGHSLPTK 301
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
++ + D++ T + V K K + S EV T I M+ EEK +LG L
Sbjct: 302 SRPREDVE-TVKNVPLKKMK-VASRPQEV---------TPIPSKLVMTDEEKLSLGRELE 350
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 327
L E ++ + E + + E ++D+D S+ TL++L+
Sbjct: 351 SLLGEMPLHIIDFLREQSSGGRECGEDEFEIDIDDLSDDTLFKLR 395
>gi|359488601|ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
Length = 739
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + +Q+ H+ W F PVD+ L + DY+ +I+ PMD TIK GK +G
Sbjct: 174 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIK----GKIASGA 229
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + + ADVRL F NA +N +DVH MA +L + FE +W + K+ + +
Sbjct: 230 YSSPLDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPG 289
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
+ +M+ T + + +K +++ S +EV ++E V QK M+ +EK+NLG L
Sbjct: 290 KYGTHGEMK-TAKPMPPSKKRKVTSTHHEV------IQEPV-QKV--MTADEKRNLGRDL 339
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQ--EVDLDMDAQSELTLWRLKVFVQESLKAASRS 340
L E + ++ + ++ + T + E+++D++A S+ TL+ L+ + + L+ +S
Sbjct: 340 EDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDYLQEKQKS 399
Query: 341 SG 342
G
Sbjct: 400 HG 401
>gi|326936210|ref|XP_003214150.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Meleagris gallopavo]
Length = 697
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 83/150 (55%), Gaps = 6/150 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK-- 119
P KS + + R V +K D+ ++ E + + I +++ K
Sbjct: 234 PTEPKSTKLGPRRESSRPVKPPKKDVPDSQQHMVEKSSKVSEQLKYCSGIIKEMFAKKHA 293
Query: 120 -WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 294 AYAWPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAADVRLMFS 350
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 351 NCYKYNPADHEVVAMARKLQDVFEMRFAKM 380
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLEN- 116
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y N +E D +F N YN DD+ +MA++L E+ +LQ + ++ +EE
Sbjct: 117 --NYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL----EKLFLQKISEMTQEE 168
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 265 QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTL 323
+KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 529 EKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTL 588
Query: 324 WRLKVFVQESLK 335
L+ +V L+
Sbjct: 589 RELERYVTSCLR 600
>gi|198282051|ref|NP_001128282.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
gi|197245764|gb|AAI68574.1| brd2 protein [Xenopus (Silurana) tropicalis]
Length = 758
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK- 119
Q + +K I + R + +K D+ + + ++ E + I +++ K
Sbjct: 280 QASETKPAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKH 339
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A VRL+F
Sbjct: 340 AAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNRE---FKDAQEFAAAVRLMF 396
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN DV MA+ L + FE ++ ++
Sbjct: 397 SNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 427
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ + + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 46 FSNSKKPGRSTNQLQYLHKVVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 105
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
IK ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 106 IKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|195355783|ref|XP_002044367.1| GM11218 [Drosophila sechellia]
gi|194130685|gb|EDW52728.1| GM11218 [Drosophila sechellia]
Length = 1272
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 501 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 557
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 558 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 586
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|7512236|pir||T28145 RING3 kinase - chicken
gi|3129967|emb|CAA18965.1| RING3 kinase [synthetic construct]
gi|197304363|dbj|BAG69309.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304393|dbj|BAG69337.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304423|dbj|BAG69365.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304438|dbj|BAG69379.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304497|dbj|BAG69434.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|71897271|ref|NP_001025845.1| bromodomain-containing protein 2 [Gallus gallus]
gi|1370092|emb|CAA65449.1| kinase [Gallus gallus]
Length = 729
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 257 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 316
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 317 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 373
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 374 KYNPPDHDVVAMARKLQDVFEFSYAKM 400
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|443611854|gb|AGC96178.1| bromodomain-containing protein 2 [Tympanuchus cupido]
Length = 779
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 307 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 366
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 367 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 423
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 424 KYNPPDHDVVAMARKLQDVFEFSYAKM 450
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 72 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 130 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 181
>gi|301785596|ref|XP_002928216.1| PREDICTED: bromodomain-containing protein 4-like [Ailuropoda
melanoleuca]
Length = 1260
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|197304453|dbj|BAG69393.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|148356975|dbj|BAF62999.1| Bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304348|dbj|BAG69295.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304378|dbj|BAG69323.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304408|dbj|BAG69351.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304468|dbj|BAG69407.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304482|dbj|BAG69420.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304512|dbj|BAG69448.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|197304526|dbj|BAG69461.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863985|gb|ACY01481.1| bromodomain-containing protein 2 precursor [Gallus gallus]
gi|261863995|gb|ACY01490.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|332887140|dbj|BAJ53019.2| Bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|302834497|ref|XP_002948811.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
gi|300266002|gb|EFJ50191.1| hypothetical protein VOLCADRAFT_104017 [Volvox carteri f.
nagariensis]
Length = 767
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 125/266 (46%), Gaps = 27/266 (10%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+++Q++ R A+ + + K A F+ PVD G+ DY++ I PMD TIK ++ +
Sbjct: 92 KKIQDIWRMCGAVLDFLMKKKNAIVFLRPVDPVKDGVPDYFKFICHPMDLGTIKTRLRER 151
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
Y + RE ADVRLV++N YN V +M L E +E KW +L + +
Sbjct: 152 K---YSDPREFAADVRLVWRNCATYNAVGTPVRIMGDQLSEDWERKWAELNVEQRWDALV 208
Query: 219 QEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNL 278
+ LD ++ + A++L +N V + + R M+T EK+ L
Sbjct: 209 ATRDPQTIPLDQRI------ASSARQLLQRVNSVHVLPD------ADPSRTMTTVEKRKL 256
Query: 279 GTALTRLSPEDLCKALEIVAEN----NPSFHATAQEVDLDMDAQSELTLWRLKVFV---- 330
AL+ L L L I+AEN NP +E++LD+D TLWRL+ +
Sbjct: 257 SIALSELQGNQLADVLNIIAENLKDINPDDE---EEIELDVDQLDNQTLWRLREYCDNAN 313
Query: 331 -QESLKAASRSSGDMGGNNNNNNDDN 355
+ S K + S GG + + +D+
Sbjct: 314 NKHSAKPTAPSKAGGGGASRSVHDNG 339
>gi|197304540|dbj|BAG69474.1| bromodomain-containing protein 2 precursor [Gallus gallus]
Length = 733
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I+ PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKLPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|34392374|dbj|BAC82511.1| Serine threonine Kinase [Coturnix japonica]
Length = 735
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|345787686|ref|XP_541985.3| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 4
isoform 1 [Canis lupus familiaris]
Length = 1360
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|345326866|ref|XP_001506320.2| PREDICTED: bromodomain-containing protein 4 [Ornithorhynchus
anatinus]
Length = 719
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
KS + + R V +K D+ ++ E + + I +++ K +A
Sbjct: 312 PKSAKLGPRRESSRPVKPPKKDVPDSQQHVAEKSNKISEQLKYCSGIIKEMFAKKHAAYA 371
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 WPFYKPVDVEALGLHDYCDIIKHPMDLSTIKSKLENRE---YRDAQEFAADVRLMFSNCY 428
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 KYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TI+ ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIRKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y N E D +F N YN DD+ +MA++L + F +K +L
Sbjct: 115 ENNYYWNAHECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKISEL 164
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 605 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 664
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 665 ELERYVTSCLR 675
>gi|195999880|ref|XP_002109808.1| hypothetical protein TRIADDRAFT_20501 [Trichoplax adhaerens]
gi|190587932|gb|EDV27974.1| hypothetical protein TRIADDRAFT_20501, partial [Trichoplax
adhaerens]
Length = 470
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 113/223 (50%), Gaps = 10/223 (4%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PV+ E LGL DYYE+I+ PMD T+K+K + + Y+ + E ADVRL+F N
Sbjct: 170 YAWPFYEPVNAEKLGLTDYYEIIKHPMDLGTVKDKFEKLE---YKAINEFAADVRLIFTN 226
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
KYN D+ MA+ L + FE K+ Q+ +E + +A + ++ +
Sbjct: 227 CYKYNPSDHDIVNMARRLQDVFEFKYAQI-----PDESTNTKGKASKKSSQGTSKPKPKQ 281
Query: 240 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 299
K+ R + + ++ V+ M+ +EK+ L + +L + L + + I+
Sbjct: 282 PVKKKQRKKTPPPKKRKKSYNSEVLD-VEPMTYDEKRQLSLDINKLPGDKLGRVVHIIQS 340
Query: 300 NNPSFH-ATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 341
P+ + +E+++D + TL L+ +VQ +LK R S
Sbjct: 341 REPALRESNPEEIEIDFETLKPSTLRELERYVQSTLKRQKRPS 383
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L R + + +H++AWPF PVD L L DY+++I+KPMD TIK K++G
Sbjct: 1 GRDTNQL-RFLKTVIDGLWKHRYAWPFRQPVDPVKLQLPDYFKIIKKPMDLGTIKRKLEG 59
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
K Y + +E D+ F N YN DD+ +M + L + +++K Q+ +V
Sbjct: 60 K---MYHSAKECMDDILRTFTNCYTYNKTSDDIVLMCEELEKVYKKKLAQMPAQV 111
>gi|395146456|gb|AFN53616.1| BRD2 [Chrysolophus pictus]
Length = 733
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 65 SKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WA 121
+K+ I + R + +K D+ + + ++ E + I +++ K +A
Sbjct: 261 AKAAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKHAAYA 320
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
WPF PVD LGLHDY+E+I+ PMD STIK KM+ +D Y + +E ADVRL+F N
Sbjct: 321 WPFYKPVDASALGLHDYHEIIKHPMDLSTIKRKMENRD---YHDAQEFAADVRLMFSNCY 377
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 378 KYNPPDHDVVAMARKLQDVFEFSYAKM 404
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 26 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 84 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 135
>gi|322801602|gb|EFZ22243.1| hypothetical protein SINV_03245 [Solenopsis invicta]
Length = 877
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+KPMD T+K KMD + Y+ E +DVRL+F N
Sbjct: 411 YAWPFYKPVDAELLGLHDYHEIIKKPMDLGTVKTKMDNRQ---YKTAHEFASDVRLIFTN 467
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 468 CYKYNPPDHDVVSMARKLQDIFEMRYAKV 496
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I+KPMD TIK ++
Sbjct: 47 GRITNQLQFLQKGVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL-- 104
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + +E D +F N YN +DV VMA++L + F K Q+
Sbjct: 105 -ENSYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 154
>gi|33417197|gb|AAH55508.1| Brd2b protein [Danio rerio]
gi|159155579|gb|AAI54432.1| Brd2b protein [Danio rerio]
Length = 558
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 78/128 (60%), Gaps = 7/128 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++L R + + +++ K +AWPF PVD LGLHDY+++I+ PMD
Sbjct: 328 HQPSRRGKLSKQL-RYCSGVLKELLSKKHVAYAWPFYKPVDASALGLHDYHDIIKHPMDL 386
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ YR ++ ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 387 STIKRKMDERE---YREAQQFSADVRLMFSNCYKYNPPDHDVVSMARKLQDVFEFRFAKM 443
Query: 209 LPKVMEEE 216
+V +EE
Sbjct: 444 PDEVSDEE 451
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I++PMD TIK ++
Sbjct: 47 GRATNQLQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRL-- 104
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ YR E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 105 -ENNYYRGASECLQDFNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|426230380|ref|XP_004009251.1| PREDICTED: bromodomain-containing protein 4 [Ovis aries]
Length = 1225
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 370 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 426
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 427 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 455
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 604 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 663
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 664 ELERYVTSCLR 674
>gi|351711490|gb|EHB14409.1| Bromodomain-containing protein 4 [Heterocephalus glaber]
Length = 1225
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 383 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 439
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 440 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 468
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 92 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 148
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 149 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 194
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 616 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 675
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 676 ELERYVTSCLR 686
>gi|71052031|gb|AAH35266.1| BRD4 protein [Homo sapiens]
gi|119604876|gb|EAW84470.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
gi|119604877|gb|EAW84471.1| bromodomain containing 4, isoform CRA_b [Homo sapiens]
Length = 794
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|357627183|gb|EHJ76955.1| putative bromodomain containing 3 [Danaus plexippus]
Length = 1323
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K+ MD + Y+ E ADVRL+F N
Sbjct: 400 YAWPFYKPVDAELLGLHDYFDIIKKPMDLGTVKHNMDHR---AYKTAAEFAADVRLIFTN 456
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 457 CYKYNPPDHDVVAMARKLQDVFEMRYAKI 485
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +HK+AWPF PVD + L L DY+++I+KPMD TIK ++
Sbjct: 58 GRMTNQLQFLQKNVIKAVWKHKFAWPFHQPVDAKKLNLPDYHKIIKKPMDLGTIKKRL-- 115
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D +F N YN +DV VMA++L + F + Q+
Sbjct: 116 -ESNYYYSAQECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLNRIAQM 165
>gi|356508786|ref|XP_003523135.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 781
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ H++ W F PVDV L + DY+ VI+ PMD T+K ++ + Y N +
Sbjct: 214 VLNRLMSHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGE---YSNPMDFA 270
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F+NAM YN +DVH+MA++L + FE +W + K+ + E ++
Sbjct: 271 ADVRLTFENAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPAIDSVASEPSRPTHVET 330
Query: 231 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS---P 287
+++ T K K N+ +++ E ++ R M+ EEK+ L L + P
Sbjct: 331 EISDRVPPTKKKK---ITPNDTNVKPEPVK-------RIMTVEEKQKLSLELETMIGELP 380
Query: 288 EDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
+ + L + N + E+++D+DA S+ TL++L+
Sbjct: 381 DSISDFLREQSYNEGQIN--DDEIEIDIDALSDDTLFKLR 418
>gi|355673420|gb|AER95166.1| bromodomain containing 2 [Mustela putorius furo]
Length = 613
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 84 EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYE 140
+ QQQ H+ G+ ++LK I +++ K +AWPF PVD LGLHDY++
Sbjct: 341 DSQQQ---HQSSKKGKLSEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHD 396
Query: 141 VIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
+I+ PMD ST+ KM+ +D YR+ +E ADVRL+F N KYN DV MA+ L +
Sbjct: 397 IIKHPMDLSTVXRKMENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDV 453
Query: 201 FEEKWLQL 208
FE ++ ++
Sbjct: 454 FEFRYAKM 461
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK +++
Sbjct: 81 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLEN 140
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 141 NY---YWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 184
>gi|296090258|emb|CBI40077.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 129/242 (53%), Gaps = 17/242 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + +Q+ H+ W F PVD+ L + DY+ +I+ PMD TIK GK +G
Sbjct: 151 LMKQCETLLKQLMSHQHGWVFNEPVDIVKLNIPDYFTIIKHPMDLGTIK----GKIASGA 206
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + + ADVRL F NA +N +DVH MA +L + FE +W + K+ + +
Sbjct: 207 YSSPLDFAADVRLTFSNAQTFNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPG 266
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
+ +M+ T + + +K +++ S +EV ++E V QK M+ +EK+NLG L
Sbjct: 267 KYGTHGEMK-TAKPMPPSKKRKVTSTHHEV------IQEPV-QKV--MTADEKRNLGRDL 316
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQ--EVDLDMDAQSELTLWRLKVFVQESLKAASRS 340
L E + ++ + ++ + T + E+++D++A S+ TL+ L+ + + L+ +S
Sbjct: 317 EDLLGEIPVQIIDFLRVHSSNGRETGEDDEIEVDIEALSDDTLFTLRKLLDDYLQEKQKS 376
Query: 341 SG 342
G
Sbjct: 377 HG 378
>gi|195130189|ref|XP_002009535.1| GI15407 [Drosophila mojavensis]
gi|193907985|gb|EDW06852.1| GI15407 [Drosophila mojavensis]
Length = 2056
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 526 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 582
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 583 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 611
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + I +H ++WPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 33 GRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLEN 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
Y + +E D +F N YN +DV VMA++L + F +K ++ +PK
Sbjct: 93 NY---YWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK-IESMPK 142
>gi|405967643|gb|EKC32780.1| Bromodomain testis-specific protein [Crassostrea gigas]
Length = 1173
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
Q+ + +AWPF PVD + LGLHDY+++I+KPMD TIK KM+ ++ Y+ + DV
Sbjct: 360 QVGEKAYAWPFYKPVDADVLGLHDYHDIIKKPMDLGTIKKKMESRE---YKTAAQFAEDV 416
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
RL+F N +YN DV VMA+ L + FE K+ +
Sbjct: 417 RLIFTNCYRYNPTDSDVVVMARKLQDVFEVKYATM 451
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD++ L L DYY++I++PMD TIK ++
Sbjct: 72 GRKTNQLQYLQKTVLKAVWRHQYAWPFHKPVDIKLLNLPDYYDIIKQPMDLGTIKERL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y + E D +F N YN+ ++D+ +MA+ L + F +K Q+ P
Sbjct: 130 -ETNFYYSATECIQDFNQMFTNCYIYNNPKEDIVLMAQVLEKLFLQKVAQMPP 181
>gi|312373441|gb|EFR21184.1| hypothetical protein AND_17422 [Anopheles darlingi]
Length = 1442
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 44 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 100
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKW 205
KYN DV M + L + FE +
Sbjct: 101 CYKYNPPDHDVVAMGRKLQDVFEMRL 126
>gi|344283171|ref|XP_003413346.1| PREDICTED: bromodomain-containing protein 4-like [Loxodonta
africana]
Length = 965
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWRHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
+C+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 RCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|410053415|ref|XP_512452.4| PREDICTED: bromodomain-containing protein 4 [Pan troglodytes]
Length = 1161
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN 117
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 118 Y---YWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|356557783|ref|XP_003547190.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 565
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q A I + + H ++W F PVD L + DY+ +I PMD TIK+K++ Y
Sbjct: 82 QCATILKSLMSHTYSWVFSKPVDPIALSIPDYFTIISHPMDLGTIKSKLEKNI---YSGT 138
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
E ADVRL F NAMKYN +DVH+MAK L + F+ KW L
Sbjct: 139 EEFAADVRLTFSNAMKYNPPSNDVHLMAKELSKIFDRKWKDL 180
>gi|45501005|gb|AAH67129.1| BRD4 protein, partial [Homo sapiens]
gi|116283901|gb|AAH47888.1| BRD4 protein [Homo sapiens]
Length = 548
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|60649450|gb|AAH91649.1| BRD4 protein, partial [Homo sapiens]
Length = 550
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|116283228|gb|AAH00156.1| BRD4 protein [Homo sapiens]
gi|116283846|gb|AAH38988.1| BRD4 protein [Homo sapiens]
Length = 549
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|33879612|gb|AAH30158.1| BRD4 protein, partial [Homo sapiens]
Length = 548
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|380792783|gb|AFE68267.1| bromodomain-containing protein 4 isoform short, partial [Macaca
mulatta]
Length = 553
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|115530796|emb|CAL49346.1| bromodomain containing 2 [Xenopus (Silurana) tropicalis]
Length = 529
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK- 119
Q + +K I + R + +K D+ + + ++ E + I +++ K
Sbjct: 300 QASETKPAKIPARRESGRPIKPPKKDLPDSQQHQTSKKGKLSEQLKYCNGILKELLSKKH 359
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDV LGLHDYY++I+ PMD STIK KMD ++ +++ +E A VRL+F
Sbjct: 360 AAYAWPFYKPVDVSALGLHDYYDIIKHPMDLSTIKKKMDNRE---FKDAQEFAAAVRLMF 416
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN DV MA+ L + FE ++ ++
Sbjct: 417 SNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 447
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ + + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 66 FSNSKKPGRSTNQLQYLHKVVMKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 125
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
IK ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 126 IKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 180
>gi|149034726|gb|EDL89463.1| bromodomain containing 4, isoform CRA_b [Rattus norvegicus]
Length = 723
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|328703281|ref|XP_001944541.2| PREDICTED: hypothetical protein LOC100164694 [Acyrthosiphon pisum]
Length = 1162
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+KPMD T+K K+D ++ Y+N ++ ADV L+F N
Sbjct: 361 YAWPFYKPVDAAWLGLHDYHDIIKKPMDLGTVKTKLDNRE---YKNSKDFAADVNLIFSN 417
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
KYN + DV MAK L FE K ++ P
Sbjct: 418 CYKYNPKDHDVVAMAKKLQAVFEAKMSKVPP 448
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H+ AWPF PVD L L DY++VI+ PMD T+K ++
Sbjct: 67 GRLTNKLNFLQKTVMKALWKHQHAWPFYQPVDASKLNLPDYHKVIKTPMDLGTVKKRL-- 124
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
+ Y E D+ +F N YN +DV +MA++L + F K Q++
Sbjct: 125 -ENNYYWCADECIQDINAMFSNCYTYNKPGEDVVLMAQTLEKIFLAKMGQMV 175
>gi|226493082|ref|NP_001142377.1| hypothetical protein [Zea mays]
gi|194708534|gb|ACF88351.1| unknown [Zea mays]
gi|414585390|tpg|DAA35961.1| TPA: hypothetical protein ZEAMMB73_681303 [Zea mays]
Length = 451
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 10/244 (4%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
AG R E++++ I ++ + K + F PV+VE LGLHDY+ VI++PMD T+K +
Sbjct: 103 AGLR-GEVRKRCGQILTRLRKDKRSVWFNAPVEVERLGLHDYHAVIKRPMDLGTVK---E 158
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
G Y + + ADVRL F NA++YN +VH A +LL FE + + L EE
Sbjct: 159 GLAAGRYASHDDFAADVRLTFTNALRYNPVGHEVHTFAGALLAYFERMYKEAL--ACFEE 216
Query: 217 KRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKK 276
+ E + A + +AK ++ V M+ RE R+MS EEK
Sbjct: 217 DCKRPEPPRPVPPELTPPPAAEPVEAK-VKPRAGNVRMRKPKAREP---NKREMSLEEKN 272
Query: 277 NLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKA 336
L L L E + L+IV + N + E++LD+D T W L FV KA
Sbjct: 273 MLRVGLESLPEEKMHNVLQIVRKRNNNPEMLGDEIELDIDEMDVETQWELDRFVANFNKA 332
Query: 337 ASRS 340
+S
Sbjct: 333 LKKS 336
>gi|270001347|gb|EEZ97794.1| hypothetical protein TcasGA2_TC030708 [Tribolium castaneum]
Length = 815
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+KPMD T+K KMD ++ YR+ +E ADVRL+F N
Sbjct: 375 YAWPFYKPVDAELLMLHDYHDIIKKPMDLGTVKQKMDNRE---YRSAQEFAADVRLIFTN 431
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE K+ ++
Sbjct: 432 CYKYNPSDHDVVAMARKLQDVFEVKFAKI 460
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD + L L DY+++I++PMD TIK ++
Sbjct: 33 GRITNQLQFLQKTVLKAVWKHQFAWPFRQPVDAKKLNLPDYHQIIQQPMDLGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
D Y + +E D +F N YN +DV VMA++L + F K
Sbjct: 91 -DNNYYWSGKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLTK 136
>gi|442615456|ref|NP_001259322.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
gi|440216523|gb|AGB95167.1| female sterile (1) homeotic, isoform H [Drosophila melanogaster]
Length = 1105
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 494 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 550
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 551 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 579
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|162287117|ref|NP_001104751.1| bromodomain-containing protein 4 [Danio rerio]
gi|159507457|gb|ABW97742.1| bromodomain 4 [Danio rerio]
Length = 1444
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 85 KQQQDAFHREEAA----GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHD 137
K+ D+ H AA + QE R + I + + K +AWPF PVDV+ LGLHD
Sbjct: 340 KEAPDSQHHWTAAPGTPSPKQQEQLRYCSGIVKDMFAKKHAAYAWPFYKPVDVDTLGLHD 399
Query: 138 YYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSL 197
Y+++I+ PMD STIK+K++ + YR +E ADVRL+F N KYN +V MA+ L
Sbjct: 400 YHDIIKHPMDLSTIKDKLETRQ---YREAQEFAADVRLMFSNCYKYNPPDHEVVAMARKL 456
Query: 198 LEKFEEKWLQL 208
+ FE ++ ++
Sbjct: 457 QDVFEMRFAKM 467
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 43 RQTNQLQYLLKVVLKSLWKHQFAWPFHAPVDAVKLNLPDYYKIIKNPMDMGTIKKRL--- 99
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
+ Y + +E D +F N YN DD+ +MA++L + F
Sbjct: 100 ESAFYTSAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVF 142
>gi|413925460|gb|AFW65392.1| hypothetical protein ZEAMMB73_923875 [Zea mays]
Length = 613
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 76 KDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGL 135
K V SI + + + +AA + + R I R++ HK W F PVD + +
Sbjct: 34 KKSGVTSISTCEHQSSYNLKAASMKSSRMIRLCGNIVRKLIDHKGGWLFKDPVDPDLYKI 93
Query: 136 HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 195
DY++VI PMD T+KNK+ K Y ++ E ADVRL F NAMKYN +DVH A+
Sbjct: 94 PDYFDVIRNPMDLGTVKNKLTKKK---YVSIEEFAADVRLTFSNAMKYNPPGNDVHAFAR 150
Query: 196 SLLEKFEEKW 205
L E F+ +W
Sbjct: 151 ELNEIFDSEW 160
>gi|442615458|ref|NP_001259323.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
gi|440216524|gb|AGB95168.1| female sterile (1) homeotic, isoform I [Drosophila melanogaster]
Length = 1115
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 504 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 560
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 561 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 589
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|432888948|ref|XP_004075102.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 460
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 46/216 (21%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+ PMD ST+K KMD D Y++ + ADVRL+F N
Sbjct: 248 YAWPFYKPVDAEALGLHDYHDIIKYPMDLSTVKKKMDAGD---YQDAEQFSADVRLIFSN 304
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
KYN + V MA+ L FE+K+ + M EE
Sbjct: 305 CYKYNPPQHSVVGMARKLQGVFEQKFAK-----MPEE----------------------- 336
Query: 240 NKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAE 299
+L V QL NL + K KMS E+++ T +L + + I+
Sbjct: 337 --------QLQTVHQQLSNLTQDPFNK-PKMSKEQEREPETQHKKLG-----RVVHILKT 382
Query: 300 NNPSFHAT-AQEVDLDMDAQSELTLWRLKVFVQESL 334
PS ++ E+++D + TL L+ +V+ L
Sbjct: 383 QEPSMSSSNPDEIEIDFEVLKPSTLRELERYVRSCL 418
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GRR +LK + + + +H +AWPF PVD LGL DY+++I PMD TIK ++
Sbjct: 72 GRRTNQLKYMHNVVIKSLWRHPFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRL-- 129
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y + E D +F N YN DD+ +MA L + F K + L+P+
Sbjct: 130 -ENNYYWSASECMEDFNTMFTNCYIYNKPTDDIVLMALPLEKIFLNK-VSLMPR 181
>gi|52350614|gb|AAH82782.1| Brd4 protein, partial [Mus musculus]
Length = 582
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|347968593|ref|XP_003436250.1| AGAP002807-PB [Anopheles gambiae str. PEST]
gi|333467932|gb|EGK96763.1| AGAP002807-PB [Anopheles gambiae str. PEST]
Length = 1778
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 426 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 482
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV M + L + FE
Sbjct: 483 CYKYNPPDHDVVAMGRKLQDVFE 505
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H+++WPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 31 GRLTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLEN 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y +E D +F N YN +DV VMA++L + F K + L+PK E +
Sbjct: 91 NY---YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPKDETEME 146
Query: 218 RQEEEEAK 225
Q+ + K
Sbjct: 147 VQQPKGGK 154
>gi|24640484|ref|NP_727228.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45554398|ref|NP_996368.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|45554406|ref|NP_996369.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45554416|ref|NP_996370.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|281360582|ref|NP_001162699.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
gi|157455|gb|AAA28541.1| 5.9 kb fsh membrane protein [Drosophila melanogaster]
gi|22831926|gb|AAN09226.1| female sterile (1) homeotic, isoform A [Drosophila melanogaster]
gi|45446848|gb|AAS65277.1| female sterile (1) homeotic, isoform C [Drosophila melanogaster]
gi|45446849|gb|AAS65278.1| female sterile (1) homeotic, isoform D [Drosophila melanogaster]
gi|45446850|gb|AAS65279.1| female sterile (1) homeotic, isoform E [Drosophila melanogaster]
gi|51092171|gb|AAT94499.1| LD26482p [Drosophila melanogaster]
gi|220945958|gb|ACL85522.1| fs(1)h-PA [synthetic construct]
gi|272506027|gb|ACZ95234.1| female sterile (1) homeotic, isoform F [Drosophila melanogaster]
Length = 1110
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 499 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 555
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 556 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 584
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|71681018|gb|AAI00642.1| Brd4 protein, partial [Rattus norvegicus]
Length = 566
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|410950660|ref|XP_003982021.1| PREDICTED: bromodomain-containing protein 4 [Felis catus]
Length = 720
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 428
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 429 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|74354344|gb|AAI03774.1| Brd4 protein, partial [Mus musculus]
Length = 557
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|74181884|dbj|BAE32643.1| unnamed protein product [Mus musculus]
Length = 545
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 373 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 430 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
>gi|224136059|ref|XP_002322229.1| global transcription factor group [Populus trichocarpa]
gi|222869225|gb|EEF06356.1| global transcription factor group [Populus trichocarpa]
Length = 709
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 117/234 (50%), Gaps = 23/234 (9%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q A+ ++ H++ W F PVDV L + DY+ +I+ PMD T+K+K+ + Y
Sbjct: 165 LMKQCEALLNRLMAHQFGWIFKTPVDVVKLNIPDYFTIIKHPMDLGTVKSKIVSGE---Y 221
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQE 220
+ ADVRL F NAMKYN +DVH MA++L + FE +W + LP E
Sbjct: 222 SSPLGFAADVRLTFSNAMKYNPPGNDVHSMAETLRKYFEVRWKVIEKKLPVTTGVESMPS 281
Query: 221 ------EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEE 274
E E ++ + T A K K S+ N+V + E +R R MS E
Sbjct: 282 RIDVHIERETTVHIERETTTSAPPLKKKKITPSD-NKV--KPEPVR-------RVMSNAE 331
Query: 275 KKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 327
K+ L L L E +E + E++ + T + E+++D+DA + TL+ L+
Sbjct: 332 KQKLSMELEALLGELPESIIEFLKEHSGNAGQTGEDEIEIDIDALGDDTLFNLR 385
>gi|355673426|gb|AER95168.1| bromodomain containing 4 [Mustela putorius furo]
Length = 551
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 84/151 (55%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + R V +K D+ H ++ E + + I +++ K
Sbjct: 320 PPEPKTTKLGPRRESSRPVKPPKKDVPDSQQHPVPEKSSKVSEQLKCCSGILKEMFAKKH 379
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 380 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 436
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 437 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 68 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 124
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 125 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 170
>gi|393911119|gb|EJD76176.1| bromodomain containing protein [Loa loa]
Length = 1163
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+ WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y E+ ADV LV +N
Sbjct: 378 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YATPEELRADVILVCEN 434
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEE 215
KYN D +H ++L + FE+KW Q+ P V++E
Sbjct: 435 CYKYNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 472
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + +HK AWPFM PVD LGL DY++VI++PMD +TI+ ++
Sbjct: 110 RHTNQLEFMLKEVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRL--- 166
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y + ++ D +F N K+N DDV +M K++ + EK ++LLP
Sbjct: 167 RNCYYYSAKDCMQDFESIFSNCYKFNQNEDDVSLMCKNVENLYREK-MKLLP 217
>gi|312085274|ref|XP_003144613.1| hypothetical protein LOAG_09036 [Loa loa]
Length = 1022
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+ WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y E+ ADV LV +N
Sbjct: 237 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YATPEELRADVILVCEN 293
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEE 215
KYN D +H ++L + FE+KW Q+ P V++E
Sbjct: 294 CYKYNPTSDPIHQHGRALQKYFEDKWHQMPEEPAVVDE 331
>gi|357166043|ref|XP_003580578.1| PREDICTED: transcription factor GTE7-like [Brachypodium distachyon]
Length = 458
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 13/262 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ A I ++ + K + F PV+VE LGLHDY+ VI+ PMD T++ ++ K Y
Sbjct: 124 MRKRCAQILARLQKDKRSIWFNAPVEVERLGLHDYHAVIKSPMDLGTVRARLAAK---AY 180
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ ADVRL F NA++YN DVH+ A LL FE+ + + EE KR
Sbjct: 181 PSHDAFAADVRLTFSNALRYNPAGHDVHIFAGDLLASFEKMYRAAVSWFEEECKRLAPPP 240
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
V + K + + + + N RE MS +EK L L
Sbjct: 241 PMPVAAELPPPPVVVPAQVKPRAARMRKPKAREPNKRE--------MSLDEKNMLREGLE 292
Query: 284 RLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA--SRSS 341
L E + L+IV + N + E++LD+D T W L FV KA SR +
Sbjct: 293 SLPEEKMHNVLQIVRKRNVNPALLGDEIELDIDEMDIETQWELDRFVNNFNKALNKSRRA 352
Query: 342 GDMGGNNNNNNDDNNNEKDNSN 363
M G+ N+ E N +
Sbjct: 353 AMMNGDGAVVNNATVTEAVNGD 374
>gi|170582857|ref|XP_001896320.1| Bromodomain containing protein [Brugia malayi]
gi|158596511|gb|EDP34844.1| Bromodomain containing protein [Brugia malayi]
Length = 1009
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+ WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y E+ ADV L+ +N
Sbjct: 236 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YATPEELRADVILICEN 292
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL--PKVMEEE 216
KYN D +H ++L + FE+KW Q+ P ++EE
Sbjct: 293 CYKYNPTSDPIHQHGRALQKYFEDKWRQMPEEPSAIDEE 331
>gi|351697075|gb|EHA99993.1| Bromodomain testis-specific protein [Heterocephalus glaber]
Length = 832
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 244 YAWPFHSPVDVNALGLHNYYDIVKNPMDLGTIKKKMDNQE---YKDAYEFAADVRLMFMN 300
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN D+ MAK+L + FE
Sbjct: 301 CYKYNSPDHDIVAMAKTLQDVFE 323
>gi|195565677|ref|XP_002106425.1| GD16134 [Drosophila simulans]
gi|194203801|gb|EDX17377.1| GD16134 [Drosophila simulans]
Length = 1038
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 475 YAWPFYKPVDAEMLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 531
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 532 CYKYNPPDHDVVAMGRKLQDVFEMRYANI 560
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVIPPAERPGRNTNQLQYLIQTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKETIQDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
>gi|349805091|gb|AEQ18018.1| hypothetical protein [Hymenochirus curtipes]
Length = 497
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY E+I+ PMD TIK KM+ ++ Y+ +E ADVRL+F N
Sbjct: 114 YAWPFYKPVDVEALGLHDYCEIIKHPMDLGTIKVKMENRE---YKEPQEFAADVRLMFSN 170
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V +MA+ L + FE ++ ++
Sbjct: 171 CYKYNPPDHEVVIMARKLQDVFEMRFAKM 199
>gi|255536997|ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223549464|gb|EEF50952.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 718
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 16/181 (8%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YR 164
+Q + ++ H++ W F PVDV L + DYY +I+ PMD TIK+ + +G Y
Sbjct: 107 KQCETLLSRLMSHQYGWVFKEPVDVVKLNIPDYYTIIKHPMDLGTIKSNI----CSGLYS 162
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA 224
+ E ADVRL F+NAM+YN + DVH+MA +L + FE +W + K+ + + ++
Sbjct: 163 SPLEFLADVRLTFRNAMEYNPKGSDVHIMADTLSKFFEVRWKAIEKKLPKIDTHGLPSKS 222
Query: 225 KAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTR 284
+ D+Q+T+ + K +++ S +E+ + R M+ +EK+ LG L
Sbjct: 223 GPREDLQITE--ISPIKKRKISSYQHEI---------VAVPVRRVMTDDEKQKLGKELES 271
Query: 285 L 285
L
Sbjct: 272 L 272
>gi|148708381|gb|EDL40328.1| bromodomain containing 4, isoform CRA_c [Mus musculus]
Length = 734
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK 119
+P T+K + + R V +K D+ H ++ E + + I +++ K
Sbjct: 324 EPKTAK---LGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKK 380
Query: 120 ---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+
Sbjct: 381 HAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLM 437
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N KYN +V MA+ L + FE ++ ++
Sbjct: 438 FSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 469
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 69 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 125
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 126 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 171
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 618 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 677
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 678 ELERYVTSCLR 688
>gi|427785339|gb|JAA58121.1| Putative bromodomain-containing protein 4 [Rhipicephalus
pulchellus]
Length = 1295
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 400 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 456
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 457 CYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H++AWPF PVD L L DY+ +I PMD TIK ++
Sbjct: 58 RTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 115 EHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|224056555|ref|XP_002298908.1| global transcription factor group [Populus trichocarpa]
gi|222846166|gb|EEE83713.1| global transcription factor group [Populus trichocarpa]
Length = 411
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H++ W F PVD + L LHDYY++I+ PMD T+K+++ Y++ +E
Sbjct: 38 LLGKLMKHQYGWVFNEPVDAKKLKLHDYYKIIKHPMDLGTVKSRLSK---NWYKSPKEFA 94
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRL F NAMKYN++ DVH MA LL+ FEE W
Sbjct: 95 EDVRLTFNNAMKYNEKGQDVHAMADKLLKIFEENW 129
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 260 RETVIQKCRK-------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 312
R +V+ K +K M+ EEK+ L L L E L ++I+ + NP E++
Sbjct: 236 RTSVLNKPKKNETVRGVMTYEEKQKLSIHLQSLPSEKLESVVQIIRKRNPGLFQQEDEIE 295
Query: 313 LDMDAQSELTLWRLKVFV 330
+D+D+ TLW L +V
Sbjct: 296 VDIDSFDNETLWELHGYV 313
>gi|120577456|gb|AAI30180.1| Brd2-a protein [Xenopus laevis]
Length = 518
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++LK I +++ K +AWPF PVDV LGLHDYY++I+ PMD
Sbjct: 312 HQTSKKGKLSEQLKY-CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDM 370
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ +++ +E A +RL+F N KYN DV MA+ L + FE + ++
Sbjct: 371 STIKKKMDSRE---FKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ A+ + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 46 FINPKKPGRSTNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 105
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 106 VKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|54311476|gb|AAH84758.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 525
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++LK I +++ K +AWPF PVDV LGLHDYY++I+ PMD
Sbjct: 312 HQTSKKGKLSEQLKY-CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDM 370
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ +++ +E A +RL+F N KYN DV MA+ L + FE + ++
Sbjct: 371 STIKKKMDSRE---FKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ A+ + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 46 FINPKKPGRSTNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 105
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 106 VKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|27696271|gb|AAH43784.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 539
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++LK I +++ K +AWPF PVDV LGLHDYY++I+ PMD
Sbjct: 332 HQTSKKGKLSEQLKY-CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDM 390
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ +++ +E A +RL+F N KYN DV MA+ L + FE + ++
Sbjct: 391 STIKKKMDSRE---FKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 447
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ A+ + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 66 FINPKKPGRSTNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 125
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 126 VKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 180
>gi|161611729|gb|AAI55902.1| Brd2-a protein [Xenopus laevis]
Length = 517
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++LK I +++ K +AWPF PVDV LGLHDYY++I+ PMD
Sbjct: 312 HQTSKKGKLSEQLKY-CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDM 370
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ +++ +E A +RL+F N KYN DV MA+ L + FE + ++
Sbjct: 371 STIKKKMDSRE---FKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ A+ + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 46 FINPKKPGRSTNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 105
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 106 VKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|76780317|gb|AAI06310.1| Brd2-A-prov protein, partial [Xenopus laevis]
Length = 517
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
H+ G+ ++LK I +++ K +AWPF PVDV LGLHDYY++I+ PMD
Sbjct: 312 HQTSKKGKLSEQLKY-CNGILKELLSKKHAAYAWPFYKPVDVSALGLHDYYDIIKHPMDM 370
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STIK KMD ++ +++ +E A +RL+F N KYN DV MA+ L + FE + ++
Sbjct: 371 STIKKKMDSRE---FKDAQEFAAAIRLMFSNCYKYNPPDHDVVAMARKLQDVFEFSYAKM 427
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR +L+ A+ + + +H+++WPF PVD LGL DY+++I++PMD T
Sbjct: 46 FINPKKPGRSTNQLQYLHKAVVKSLWKHQFSWPFRQPVDAVKLGLPDYHKIIKQPMDMGT 105
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K ++ + Y + E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 106 VKKRL---ENNYYWSALECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKMFLQKVAQM 160
>gi|18308127|gb|AAL67834.1|AF461396_1 bromodomain-containing protein BRD4 short variant [Mus musculus]
Length = 723
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK 119
+P T+K + + R V +K D+ H ++ E + + I +++ K
Sbjct: 313 EPKTAK---LGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKK 369
Query: 120 ---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+
Sbjct: 370 HAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLM 426
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N KYN +V MA+ L + FE ++ ++
Sbjct: 427 FSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|194211115|ref|XP_001493233.2| PREDICTED: bromodomain testis-specific protein-like isoform 2
[Equus caballus]
Length = 928
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++KPMD TIK KMD
Sbjct: 267 KVTEQLRHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDVVKKPMDLGTIKGKMD 326
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ E ADVRL+F N +YN +V MA+ L + FE + ++
Sbjct: 327 NQE---YKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TI+ +++
Sbjct: 25 GRITNQLQYLQKVVLKALWKHGFSWPFQQPVDAVKLQLPDYYTIIKNPMDLNTIQKRLEH 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 85 K---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|226246640|ref|NP_932762.2| bromodomain-containing protein 4 isoform 2 [Mus musculus]
gi|148708380|gb|EDL40327.1| bromodomain containing 4, isoform CRA_b [Mus musculus]
gi|187951219|gb|AAI38836.1| Bromodomain containing 4 [Mus musculus]
gi|187952057|gb|AAI38835.1| Bromodomain containing 4 [Mus musculus]
Length = 723
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 61 QPNTSKSISIAKEKLKDRHVASIEKQQQDA-FHREEAAGRRMQELKRQFAAIFRQITQHK 119
+P T+K + + R V +K D+ H ++ E + + I +++ K
Sbjct: 313 EPKTAK---LGPRRESSRPVKPPKKDVPDSQQHPGPEKSSKISEQLKCCSGILKEMFAKK 369
Query: 120 ---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+
Sbjct: 370 HAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLESRE---YRDAQEFGADVRLM 426
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N KYN +V MA+ L + FE ++ ++
Sbjct: 427 FSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 607 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 666
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 667 ELERYVTSCLR 677
>gi|334321601|ref|XP_001377106.2| PREDICTED: bromodomain testis-specific protein [Monodelphis
domestica]
Length = 1066
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 292 YAWPFYKPVDVTALGLHNYYDVVKSPMDLGTIKKKMDNQE---YKDAHEFAADVRLMFMN 348
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA++L + FE ++ ++
Sbjct: 349 CYKYNPPDHEVVTMARTLQDVFEMQFAKI 377
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+KPMD STIK +++
Sbjct: 25 GRLTNQLQYLQKVVLKALWRHSFSWPFQQPVDAAKLKLPDYYSIIKKPMDLSTIKKRLEH 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D++ +F N YN DD+ +MA++L + F +K Q+
Sbjct: 85 K---YYVKSSECVEDLKTMFTNCYLYNKPGDDIVLMAQALEKLFMQKMSQM 132
>gi|224060209|ref|XP_002300086.1| global transcription factor group [Populus trichocarpa]
gi|222847344|gb|EEE84891.1| global transcription factor group [Populus trichocarpa]
Length = 630
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + +++ H++ W F PVD+ L + DYY VI+ PMD TIK+K+ Y
Sbjct: 115 LMKQCETLLKRLMSHQYGWVFNSPVDIVKLNIPDYYTVIKNPMDLGTIKSKI---SSGAY 171
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
+ E ADVRL FKNAM YN + D ++MA +L + FE +W + K+ +E
Sbjct: 172 SSPLEFMADVRLTFKNAMVYNPQGSDAYIMADTLNKFFEMRWKAIEKKLPRAGGEVLQEN 231
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
+ D E +T+ AK+ + + D+ E + R M+ EE+ NLG L
Sbjct: 232 SGPHEDF----ETAETSPAKKRKVTSFQHDIMPEPGK-------RGMTDEERLNLGRELE 280
Query: 284 RLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
L E ++ + E+ S H +E+++D+D S+ TL+ L+ + + L+
Sbjct: 281 SLLGEMPVNIIDFLREHCSSGRHGGEEEIEIDIDELSDDTLFTLRKLLDDYLQ 333
>gi|170036200|ref|XP_001845953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878751|gb|EDS42134.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 848
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 428 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSANEFAADVRLIFTN 484
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV M + L + FE
Sbjct: 485 CYKYNPPDHDVVAMGRKLQDVFE 507
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 95 EAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
E GR +L + + + +H+++WPF PVD + L L DY+++I++PMD T+K +
Sbjct: 52 ERPGRLTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTVKKR 111
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ + Y +E D ++F N YN +DV VMA++L + F K + L+PK
Sbjct: 112 L---ENNYYWTSKEAIQDFNIMFSNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 164
>gi|395530391|ref|XP_003767279.1| PREDICTED: bromodomain testis-specific protein [Sarcophilus
harrisii]
Length = 840
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDV LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 231 YAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMDNQE---YKDAHEFAADVRLMFMN 287
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA++L + FE ++ ++
Sbjct: 288 CYKYNPPDHEVVAMARTLQDVFEMQFAKI 316
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
+ DYY +I+KPMD STIK +++ K Y E D++ +F N YN DD+ +MA
Sbjct: 1 MMDYYSIIKKPMDLSTIKKRLEHK---YYVKSSECIEDLKTMFANCYLYNKPGDDIVLMA 57
Query: 195 KSLLEKFEEKWLQLLP 210
++L + F +K Q+ P
Sbjct: 58 QALEKLFTQKMSQMPP 73
>gi|357149985|ref|XP_003575300.1| PREDICTED: transcription factor GTE9-like [Brachypodium distachyon]
Length = 705
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 28/230 (12%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVDVE L + DY ++++ PMD TIK K+ D Y +
Sbjct: 165 KQCEAILKKLMTQKYSHIFNVPVDVEKLNIPDYNDIVKHPMDLGTIKKKL---DSGSYTS 221
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
ADVRL F NA+ YN VH MA L + FE +W K E++ A
Sbjct: 222 PSSFAADVRLTFNNAITYNPRGHAVHDMAIQLNKIFESRW-----------KTVEKKLAS 270
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
A D V+ ++A R + V D+ +E +R T I K M+ EEK++ G L
Sbjct: 271 ATADPH-----VEVDRADSKRRKTPPVDCSDLSMECVRPTEIVK-PTMTFEEKESFGNCL 324
Query: 283 TRLS-----PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
LS P + L+ +++ + H E+++D+ A S+ L LK
Sbjct: 325 ASLSEDPELPGYIIDLLQQCIDSSNTDHLGDGEIEIDIHALSDDILLELK 374
>gi|410902639|ref|XP_003964801.1| PREDICTED: uncharacterized protein LOC101061335 [Takifugu rubripes]
Length = 1416
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 109 AAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
A++ R++ K +AWPF PVD + LGLHDY+++I+ PMD STIK K++ + YR
Sbjct: 375 ASLVREMVSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKAKLENRQ---YRE 431
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 432 PQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 474
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY +I+ PMD TIK ++
Sbjct: 45 RQTNQLQFLLKMVLKTLWKHQFAWPFQAPVDAVKLNLPDYYTIIKTPMDMGTIKKRL--- 101
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y N +E D +F N YN DD+ +MA++L + F +K ++
Sbjct: 102 ENSYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKVFLQKVTEM 151
>gi|40788944|dbj|BAA05393.2| KIAA0043 [Homo sapiens]
Length = 731
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 312 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 371
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 372 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 420
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 38 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 95
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 96 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 145
>gi|397503778|ref|XP_003822496.1| PREDICTED: bromodomain-containing protein 3 [Pan paniscus]
Length = 728
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|390352946|ref|XP_003728004.1| PREDICTED: uncharacterized protein LOC100892105 [Strongylocentrotus
purpuratus]
Length = 1350
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQ--HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFS 149
H++ G+ +LK + I +++ +AWPF PVD + LGLHDY+E+I+ PMD
Sbjct: 348 HQKGKKGKLTAQLKYCYGVIKELMSKKHSAYAWPFFKPVDADVLGLHDYHEIIKTPMDMG 407
Query: 150 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
T+K K++ +D Y+N + A+VRL+F N KYN DV MA+ L FE K+ ++
Sbjct: 408 TVKVKLENRD---YKNANDFAANVRLIFTNCYKYNPPDHDVVGMARKLQNVFEVKFAKM 463
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 7/141 (4%)
Query: 68 ISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHP 127
+S+ K ++ D +AS Q Q R+ GR+ +L+ + + + +H++AWPF HP
Sbjct: 8 LSLMKTEMND--MASATGQTQSTNCRQ--PGRQTNQLQYLQKVVMKALWKHQFAWPFHHP 63
Query: 128 VDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDER 187
VD L L DY+++I+ PMD TIK ++ + Y + +E +D L+F N YN
Sbjct: 64 VDPTKLALLDYFKIIKTPMDLGTIKKRL---ESIYYHSAKECISDFNLMFTNCYVYNKPG 120
Query: 188 DDVHVMAKSLLEKFEEKWLQL 208
+DV +MA++L + F K Q+
Sbjct: 121 EDVVLMAQALEKLFLTKVAQM 141
>gi|347968595|ref|XP_312107.4| AGAP002807-PA [Anopheles gambiae str. PEST]
gi|333467931|gb|EAA07774.4| AGAP002807-PA [Anopheles gambiae str. PEST]
Length = 870
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 426 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAADVRLIFTN 482
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV M + L + FE
Sbjct: 483 CYKYNPPDHDVVAMGRKLQDVFE 505
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H+++WPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 31 GRLTNQLHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLEN 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y +E D +F N YN +DV VMA++L + F K + L+PK E +
Sbjct: 91 NY---YWTSKECIQDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPKDETEME 146
Query: 218 RQEEEEAK 225
Q+ + K
Sbjct: 147 VQQPKGGK 154
>gi|114627431|ref|XP_001170358.1| PREDICTED: bromodomain-containing protein 3 isoform 8 [Pan
troglodytes]
gi|410223876|gb|JAA09157.1| bromodomain containing 3 [Pan troglodytes]
gi|410253994|gb|JAA14964.1| bromodomain containing 3 [Pan troglodytes]
gi|410301574|gb|JAA29387.1| bromodomain containing 3 [Pan troglodytes]
gi|410339465|gb|JAA38679.1| bromodomain containing 3 [Pan troglodytes]
Length = 726
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|431897072|gb|ELK06336.1| Bromodomain testis-specific protein, partial [Pteropus alecto]
Length = 931
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 86 QQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVI 142
QQQ H+ +G+ ++L R + I +++ K +AWPF +PVDV LGLH+YY+++
Sbjct: 265 QQQ---HKVVKSGKVTEQL-RHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIV 320
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ PMD TIK KMD ++ Y++ E ADVRL+F N KYN +V MA+ L + FE
Sbjct: 321 KNPMDLGTIKRKMDNQE---YKDAYEFAADVRLMFVNCYKYNPPDHEVVAMARMLQDVFE 377
Query: 203 EKWLQL 208
+ ++
Sbjct: 378 MHFAKI 383
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+KPMD STIK +++
Sbjct: 32 GRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAMKLKLPDYYTIIKKPMDLSTIKKRLEH 91
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 K---YYVQASECIEDFNMMFSNCYLYNKTGDDIVLMAQALEKLFRQKLSQM 139
>gi|426363503|ref|XP_004048879.1| PREDICTED: bromodomain-containing protein 3 [Gorilla gorilla
gorilla]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|302564433|ref|NP_001181047.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|355567354|gb|EHH23695.1| hypothetical protein EGK_07225 [Macaca mulatta]
gi|383421773|gb|AFH34100.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|384949538|gb|AFI38374.1| bromodomain-containing protein 3 [Macaca mulatta]
gi|387542198|gb|AFJ71726.1| bromodomain-containing protein 3 [Macaca mulatta]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|11067749|ref|NP_031397.1| bromodomain-containing protein 3 [Homo sapiens]
gi|12643726|sp|Q15059.1|BRD3_HUMAN RecName: Full=Bromodomain-containing protein 3; AltName:
Full=RING3-like protein
gi|46241518|gb|AAS82952.1| endothelial differentiation inhibitory protein D18 [Homo sapiens]
gi|119608519|gb|EAW88113.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|119608521|gb|EAW88115.1| bromodomain containing 3, isoform CRA_a [Homo sapiens]
gi|168274318|dbj|BAG09579.1| bromodomain-containing protein 3 [synthetic construct]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|297685659|ref|XP_002820401.1| PREDICTED: bromodomain-containing protein 3 [Pongo abelii]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|332255339|ref|XP_003276790.1| PREDICTED: bromodomain-containing protein 3 [Nomascus leucogenys]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|402896155|ref|XP_003911172.1| PREDICTED: bromodomain-containing protein 3 [Papio anubis]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|395822025|ref|XP_003784325.1| PREDICTED: bromodomain testis-specific protein [Otolemur garnettii]
Length = 928
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 271 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKHPMDLGTIKGKMD 330
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ E ADVRL+F N KYN +V MAK L + FE + ++
Sbjct: 331 NQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMAKMLQDVFEMHFAKI 379
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR +L+ + + + +H ++WPF HPVD L L DYY +I+ PMD +TIK +++
Sbjct: 24 TGRLTNQLQYLQKVVLKALWKHSFSWPFQHPVDAVKLKLPDYYTIIKNPMDLNTIKKRLE 83
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D+ +F N YN DD+ +MA++L + F +K Q+
Sbjct: 84 NK---YYVKASECIEDLNTMFSNCYLYNKPGDDIVLMAQALEKLFIQKLSQM 132
>gi|297789895|ref|XP_002862870.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
gi|297308629|gb|EFH39129.1| hypothetical protein ARALYDRAFT_497270 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKWAW F PVDV GLGLHDY++V++KPMD T+K +D Y + +
Sbjct: 176 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKG---FYVSPIDFA 232
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 233 TDVRLTFNNAMTYNPKGQDVYFMADKLLDHFD 264
>gi|355752948|gb|EHH56994.1| hypothetical protein EGM_06545 [Macaca fascicularis]
Length = 726
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|387014800|gb|AFJ49519.1| bromodomain-containing protein 2-like [Crotalus adamanteus]
Length = 715
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+E+I+ PMD S+IK KM+ ++ YR+ +E +DVRL+F N
Sbjct: 373 YAWPFYKPVDASALGLHDYHEIIKHPMDLSSIKRKMENRE---YRDAQEFASDVRLMFSN 429
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 430 CYKYNPPDHDVVAMARKLQDVFEFSYAKM 458
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 3/130 (2%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H++S + GR +L+ + + + +H++AWPF PVD LGL DY
Sbjct: 55 HLSSAANPPPPEVSNPKKPGRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDY 114
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+++I++PMD TIK +++ +G Y + E D +F N YN DD+ +MA++L
Sbjct: 115 HKIIKQPMDMGTIKRRLE--NGY-YWSSGECMQDFNTMFTNCYIYNKPTDDIVLMAQTLE 171
Query: 199 EKFEEKWLQL 208
+ F +K Q+
Sbjct: 172 KIFLQKVAQM 181
>gi|449433591|ref|XP_004134581.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
gi|449523269|ref|XP_004168646.1| PREDICTED: transcription factor GTE11-like [Cucumis sativus]
Length = 569
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q ++I + + H++ W F PVD L + DY+ +I PMD T+K+K++ Y+
Sbjct: 109 QQCSSILKTLMTHRFGWVFNQPVDPVALKIPDYFSIITDPMDLGTVKSKLER---NLYQA 165
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
E AD+RL F NAM YN + VH MAK LLE FE+KW +LPK
Sbjct: 166 SEEFAADIRLTFSNAMLYNPSGNHVHKMAKELLENFEKKW--ILPK 209
>gi|403301507|ref|XP_003941429.1| PREDICTED: bromodomain-containing protein 3 [Saimiri boliviensis
boliviensis]
Length = 726
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 307 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 366
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 367 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 10/143 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 149
Query: 211 KVMEEEKRQEEEEAKAQLDMQLT 233
V + + R+ A++ Q+
Sbjct: 150 PVPKGKGRKPAAGAQSTGTQQVA 172
>gi|356549150|ref|XP_003542960.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 566
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q A I + + H ++W F+ PVD L + DY+ +I PMD TIK+K++ Y
Sbjct: 82 QCATILKSLMSHSYSWVFLKPVDPVALSIPDYFTIISHPMDLGTIKSKLERNI---YSGT 138
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E DVRL F NAMKYN +DVH+MAK L + F+ KW
Sbjct: 139 EEFADDVRLTFSNAMKYNPPGNDVHMMAKELSKIFDRKW 177
>gi|47209011|emb|CAF91369.1| unnamed protein product [Tetraodon nigroviridis]
Length = 530
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 113/252 (44%), Gaps = 40/252 (15%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG + Y + ADVRL+F N
Sbjct: 279 YAWPFYEPVDAEALQLHDYHDIIKYPMDLSTVKRKMDGGE---YPDADSFAADVRLIFSN 335
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL---------LPKVMEEEKRQEEEEAKAQLDM 230
+YN + +V AK L FE+ + ++ P + + +E A ++
Sbjct: 336 CYRYNPAQLEVVAQAKKLQGVFEKSFAKIPDEPANPGQAPAAASGKSDRTDERAAPLAEV 395
Query: 231 QLTQEAVQTNKAKELRSELNEV------------DMQLENLRETVI-------------- 264
Q A Q A + + ++EV ++ +N
Sbjct: 396 QEQAGADQDKAAPDRLAAVSEVPPNKRKKKDDQNNIDRQNRGSPTFDSGNLWKKLKSWDP 455
Query: 265 -QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPS-FHATAQEVDLDMDAQSELT 322
KC ++ EEK L + RL + L ++I+ PS A E+++D + T
Sbjct: 456 EAKCLPLTYEEKHQLSLDINRLPGKKLGCVVQIIQTLEPSTCEANPDEIEIDFEVLKPST 515
Query: 323 LWRLKVFVQESL 334
L +L+ +V+ L
Sbjct: 516 LRQLQQYVKHCL 527
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 7/130 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GRR +L+ + + + +H +AWPF PVD LGL DY+++I PMD TIK ++
Sbjct: 27 GRRTNQLQFMQNVVVKSLWRHHYAWPFYEPVDAVALGLSDYHKIITSPMDLGTIKKRL-- 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
+ Y E D +F N YN DD+ +MA +L E+ +LQ + ++ +EE
Sbjct: 85 -ENNYYWTASECLQDFNTMFTNCYIYNKPTDDIVLMALTL----EKIFLQKVGQMPQEEV 139
Query: 218 RQEEEEAKAQ 227
+ AK +
Sbjct: 140 EVHPQAAKGK 149
>gi|391337779|ref|XP_003743242.1| PREDICTED: bromodomain testis-specific protein-like [Metaseiulus
occidentalis]
Length = 802
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 12/152 (7%)
Query: 62 PNTSKSISIAKEKLKD--RHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK 119
P SK IS +E + + V I + Q H + G+ ++LK +I +++ K
Sbjct: 355 PPDSKKISTRRESGRPIKKPVKDIPESAQ---HSKVKRGKMTEKLK-YCNSIIKELFAKK 410
Query: 120 ---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+AWPF VDVEGLGLHDYY++I +PMD TIK KM+ ++ YRN + DVRLV
Sbjct: 411 HSAYAWPFYTAVDVEGLGLHDYYDIITQPMDLGTIKTKMERRE---YRNPDDFCNDVRLV 467
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N KYN +V MA+ L + FE K ++
Sbjct: 468 FMNCYKYNPADHEVVKMARKLQDVFEMKLTKM 499
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 67 RNTNQLQFMLKHVMKAVWKHNFAWPFQQPVDTIKLNLPDYFKIIKVPMDLGTIKKRL--- 123
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D ++F N YN +DV +MA+SL + F K ++
Sbjct: 124 ENCYYYDAQECINDFNVLFSNCYIYNKPGEDVVLMAQSLEKLFLSKLAEM 173
>gi|170587322|ref|XP_001898426.1| Bromodomain containing protein [Brugia malayi]
gi|158594150|gb|EDP32738.1| Bromodomain containing protein [Brugia malayi]
Length = 960
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+ WPF+ PVDVEGL L DYY++++ PMD TI+ K+D K Y E+ ADV LV +N
Sbjct: 420 FTWPFLEPVDVEGLKLEDYYDIVKNPMDLGTIRRKLDAKQ---YATPEELRADVILVCEN 476
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN D +H ++L + FE+KW Q+
Sbjct: 477 CYKYNPTSDPIHQHGRALQKYFEDKWRQM 505
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 65/156 (41%), Gaps = 40/156 (25%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM--- 155
R +L+ + + +HK AWPFM PVD LGL DY++VI++PMD +TI+ ++
Sbjct: 110 RHTNQLEFMLKEVLKPAMRHKHAWPFMKPVDAVRLGLPDYHKVIKRPMDMNTIEKRLRNC 169
Query: 156 ---DGKDG-------------------TGYRNVREIYA---------------DVRLVFK 178
KD T IYA DV +F
Sbjct: 170 YYYSAKDCMQVSRPLFFELETECIWTFTERATSTGIYASDCVMTYFEFFNSSDDVMTMFN 229
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 214
N YN V++MAK+L + K + P+ +E
Sbjct: 230 NCYTYNPPEYGVYMMAKNLEQYILSKLAAMPPEEVE 265
>gi|242065686|ref|XP_002454132.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
gi|241933963|gb|EES07108.1| hypothetical protein SORBIDRAFT_04g025160 [Sorghum bicolor]
Length = 711
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 121/236 (51%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVDV+ L + DY+++++ PMD T++ K+ + Y +
Sbjct: 173 KQCEAILKKLMTQKYSHIFNVPVDVDKLQIPDYFDIVKTPMDLGTVQKKL---ESGSYTS 229
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN + VH MA L + FE +W + EK+
Sbjct: 230 PSDFAADVRLTFNNAMAYNPKGHAVHDMAIQLNKMFESRWRPI-------EKK------- 275
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ E +R+T +K KM+ EE++ G +L
Sbjct: 276 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSTEGVRQTEPEKP-KMTAEEREAFGNSL 332
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 333 ASISDELPPHIFELLQQCIDSNTDMPGDG-EIEIDIQAVSDDMLFELKKHVDKYLQ 387
>gi|410967748|ref|XP_003990377.1| PREDICTED: bromodomain testis-specific protein [Felis catus]
Length = 939
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++
Sbjct: 274 RHCSEILKEMLAKKHLSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMDNQE--- 330
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y++ E ADVRL+F N KYN +V MA++L + FE + ++
Sbjct: 331 YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFAKI 376
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 25 GRLTNQLQYLQKVVLKALWRHNFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEH 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 85 K---YYMKASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|348511137|ref|XP_003443101.1| PREDICTED: bromodomain-containing protein 2-like [Oreochromis
niloticus]
Length = 819
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD STIK KMD ++ YR+ ++ +DVRL+F N
Sbjct: 391 YAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCRE---YRDAQQFASDVRLMFSN 447
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 448 CYKYNPPDHDVVGMARKLQDVFEFRFAKM 476
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I++PMD TIK ++
Sbjct: 69 GRMTNQLQYLQKTLMKSLWRHHFAWPFQEPVDAYKLNLPDYHKIIKQPMDMGTIKKRL-- 126
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 127 -ENNFYRSASECIQDFNTMFTNCYIYNKPTDDIVLMAQSLEKIFLQKVAQM 176
>gi|120431736|ref|NP_473395.2| bromodomain testis-specific protein isoform A [Mus musculus]
gi|425906068|sp|Q91Y44.3|BRDT_MOUSE RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Bromodomain-containing female sterile homeotic-like
protein; AltName: Full=RING3-like protein
gi|148688221|gb|EDL20168.1| bromodomain, testis-specific [Mus musculus]
Length = 956
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN +V MA++L + FE
Sbjct: 347 CYKYNPPDHEVVAMARTLQDVFE 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 24 SGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLE 83
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 84 NK---YYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|291398522|ref|XP_002715912.1| PREDICTED: Bromodomain testis-specific protein-like [Oryctolagus
cuniculus]
Length = 953
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 265 KVTEQLRHCSEILKEMLAKKHLPYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKGKMD 324
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y++ E ADVRL+F N KYN +V MA++L + FE + ++
Sbjct: 325 SHQ---YKDACEFAADVRLMFMNCYKYNPPDHEVVTMARTLQDVFEMHFARI 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R +A + + F + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQIALVNPPPPE-FINTKKNGRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLK 61
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 62 LPDYYTIIKSPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 118
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 119 QTLEKLFMQKLSQM 132
>gi|13957951|gb|AAK50736.1| bromodomain-containing female sterile homeotic-like protein [Mus
musculus]
Length = 956
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN +V MA++L + FE
Sbjct: 347 CYKYNPPDHEVVAMARTLQDVFE 369
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 24 SGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLE 83
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 84 NK---YYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
>gi|297797597|ref|XP_002866683.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
gi|297312518|gb|EFH42942.1| hypothetical protein ARALYDRAFT_919899 [Arabidopsis lyrata subsp.
lyrata]
Length = 577
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKWAW F PVDV GLGLHDY++V++KPMD T+K +D Y + +
Sbjct: 176 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKG---FYVSPIDFA 232
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 233 TDVRLTFNNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ EEK LG L L PE L + ++I+ + N E++LD++A TLW L
Sbjct: 393 RLMTMEEKSKLGMNLQDLPPEKLGQLVQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 452
Query: 328 VFVQESLKAASR 339
FV K AS+
Sbjct: 453 RFVTNYKKMASK 464
>gi|427798983|gb|JAA64943.1| Putative bromodomain-containing protein 2, partial [Rhipicephalus
pulchellus]
Length = 852
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 400 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 456
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 457 CYKYNPPDHEVVAMARKLQDVFEMRYAKM 485
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H++AWPF PVD L L DY+ +I PMD TIK ++
Sbjct: 58 RTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 115 EHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|47208417|emb|CAF92198.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1579
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 109 AAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
A++ R++ K +AWPF PVD + LGLHDY+++I+ PMD STIK K++ + YR
Sbjct: 444 ASLVREMLSKKHAAYAWPFYKPVDADALGLHDYHDIIKHPMDLSTIKVKLENRQ---YRE 500
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 501 PQEFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 543
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 35/138 (25%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL------------------------- 133
R+ +L+ + + + +H++AWPF PVD L
Sbjct: 39 RQTNQLQFLLKMVLKTLWKHQFAWPFHAPVDAVKLNLPVSVAPRDCSHLDIQYKYYTQFC 98
Query: 134 -------GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDE 186
L DYY +I+ PMD TIK ++ + + Y N +E D +F N YN
Sbjct: 99 EVNCQMQSLQDYYTIIKTPMDMGTIKKRL---ENSYYWNAQECIQDFNTMFTNCYIYNKP 155
Query: 187 RDDVHVMAKSLLEKFEEK 204
DD+ +MA++L + F +K
Sbjct: 156 GDDIVLMAEALEKVFLQK 173
>gi|356560521|ref|XP_003548540.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 740
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +++ H++ W F PVDV L L DY+ +I+ PMD T+K+K+ + Y E
Sbjct: 184 LLKRLMSHQYGWVFKTPVDVVKLKLPDYFSIIKHPMDLGTVKSKIAAGE---YAGPIEFA 240
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE-KRQEEEEAKAQLD 229
DVRL F NAM YN +DVHVMA +L + FE +W K +E++ R+++ ++ D
Sbjct: 241 DDVRLTFSNAMIYNPRGNDVHVMADTLSKYFELRW-----KAIEKKLPRRDDVPFPSKPD 295
Query: 230 MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-MSTEEKKNLGTALTRLSPE 288
+ + +K + +++ + Q V+ +K MS +EK NLG L L E
Sbjct: 296 TYVIKTTRPMPPSK--KRKISTLPCQ-----PVVMPPAKKVMSDQEKHNLGIELESLLGE 348
Query: 289 DLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESL 334
++ + EN + + E+++D+D + TL+ L+ + + L
Sbjct: 349 MPMHIIDFLKENCSNGEECGEDELEIDIDDLKDDTLFALRKLLDDFL 395
>gi|356516581|ref|XP_003526972.1| PREDICTED: transcription factor GTE10-like [Glycine max]
Length = 786
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 120/236 (50%), Gaps = 14/236 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ H++AW F PVDV L + DY+ VI+ PMD T+K ++ + Y N +
Sbjct: 216 VLNRLMSHQFAWVFNDPVDVVKLNIPDYFTVIKHPMDLGTVKKRITSGE---YSNPMDFA 272
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN +DVH+MA++L + FE +W + K+ + E +++
Sbjct: 273 ADVRLTFDNAMFYNPAGNDVHIMAETLSKFFETRWKAIEKKIPVIDCVASEPSRPTRVET 332
Query: 231 QLTQEAVQTNKAKELRSELNEVDMQLENLRETV-IQKCRKMSTEEKKNLGTALTRLSPED 289
+++ T K K N+ ++ E ++ V +++ +K+S E L T + L P+
Sbjct: 333 EISDRVPPTKKKK---ITPNDSSVKPEPVKRIVTVEEKQKLSLE----LETMIGEL-PDS 384
Query: 290 LCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMG 345
+ L + N E+++D+D S+ TL++L+ + + + +S G
Sbjct: 385 IVDFLREQSYNE--GQTNDDEIEIDIDTLSDDTLFKLRKLLDDYMLEKQKSQAKAG 438
>gi|350597125|ref|XP_003484360.1| PREDICTED: bromodomain-containing protein 3 [Sus scrofa]
Length = 726
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGR--RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG+ R+ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGRLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|195060207|ref|XP_001995768.1| GH17935 [Drosophila grimshawi]
gi|193896554|gb|EDV95420.1| GH17935 [Drosophila grimshawi]
Length = 1220
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ +++ E ADVRL+F N
Sbjct: 534 AWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---FKSAPEFAADVRLIFTNC 590
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV M + L + FE ++ +
Sbjct: 591 YKYNPPDHDVVAMGRKLQDVFEMRYANI 618
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 33 GRNTNQLQYIIKTVMKFLWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLEN 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y + +E D+ +F N YN +DV VMA +L E+ +LQ + + +EE
Sbjct: 93 NY---YWSAKEAVNDINTMFTNCSVYNKPGEDVVVMAHAL----EKVYLQKIEGMPKEEV 145
Query: 218 RQEEEEAKA 226
E AK
Sbjct: 146 ELEPVTAKG 154
>gi|42568797|ref|NP_201366.3| global transcription factor group E7 [Arabidopsis thaliana]
gi|75146221|sp|Q7Y214.1|GTE7_ARATH RecName: Full=Transcription factor GTE7; AltName:
Full=Bromodomain-containing protein GTE7; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E7
gi|30793995|gb|AAP40447.1| unknown protein [Arabidopsis thaliana]
gi|110742049|dbj|BAE98957.1| hypothetical protein [Arabidopsis thaliana]
gi|133778882|gb|ABO38781.1| At5g65630 [Arabidopsis thaliana]
gi|332010696|gb|AED98079.1| global transcription factor group E7 [Arabidopsis thaliana]
Length = 590
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKWAW F PVDV GLGLHDY++V++KPMD T+K + D Y + +
Sbjct: 176 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNL---DKGFYVSPIDFA 232
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 233 TDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ EEK LG L L PE L + L+I+ + N E++LD++A TLW L
Sbjct: 402 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 461
Query: 328 VFVQESLKAASR 339
FV K AS+
Sbjct: 462 RFVTNYKKMASK 473
>gi|427780035|gb|JAA55469.1| Putative bromodomain-containing protein 2 [Rhipicephalus
pulchellus]
Length = 873
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 419 YAWPFYKPVDAELLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 475
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 476 CYKYNPPDHEVVAMARKLQDVFEMRYAKM 504
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H++AWPF PVD L L DY+ +I PMD TIK ++
Sbjct: 58 RTTNQLQHLLKVVMKAMWKHQFAWPFQQPVDTVKLNLPDYHRIIRHPMDLGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E D + +F N YN +DV +MA++L + F K ++
Sbjct: 115 EHCYYSSAQECIEDFKTMFTNCYVYNKPGEDVVLMAQALEKLFLTKITEM 164
>gi|301770655|ref|XP_002920742.1| PREDICTED: bromodomain-containing protein 3-like [Ailuropoda
melanoleuca]
Length = 728
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDGRE---YADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 149
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 150 PVPKGKGRK 158
>gi|255084403|ref|XP_002508776.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226524053|gb|ACO70034.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 852
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R + L ++ + +HK+AW F PVD L + DY+++I+ PMDF TIK K+D K
Sbjct: 249 RHKALMKECRECLSSVRKHKYAWAFNKPVDPIALHIPDYFDIIKNPMDFGTIKEKLDKKS 308
Query: 160 --GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ--LLPKVMEE 215
Y +E D+RLVF N YN D +M +L ++FE+ WL + K+ EE
Sbjct: 309 QQNGAYSGPQEFADDMRLVFDNCALYNTPDSDAGLMGSTLQQEFEKAWLAQNVDAKIAEE 368
Query: 216 EK-RQEEEEAKAQLDMQLTQEAV--QTNKAKELRSELNEVDMQLENLR 260
E R +E+ A + +E V ++ + E+ +L EV QLE L+
Sbjct: 369 EAVRAQEDAVIASTSDEPVEEEVLAESQQVSEVNRQLAEVQRQLEELK 416
>gi|281349316|gb|EFB24900.1| hypothetical protein PANDA_009517 [Ailuropoda melanoleuca]
Length = 696
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDGRE---YADAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 149
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 150 PVPKGKGRK 158
>gi|300121324|emb|CBK21704.2| unnamed protein product [Blastocystis hominis]
Length = 304
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 45/270 (16%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
A +++ HKWA PF+HPVD LGL DY++V++ PMDFSTI ++++ + R+ E
Sbjct: 5 AKSLKKLMMHKWAGPFLHPVDPVALGLSDYFDVVKHPMDFSTILSQIENHE---LRSKDE 61
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------------------- 208
+ V LVF NA+ YN + DVH+MA L F ++ +
Sbjct: 62 FASKVNLVFDNALLYNSKGSDVHIMASELQSLFAKEMETITGQIFAAGPDAQAPTYYVPS 121
Query: 209 -------------LPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQ 255
LP+V E + E KA+L + E +++ + ++L EL+ + +
Sbjct: 122 RRERAPLPDIPPKLPRVSESRPAKSSAE-KARLAQKEEMEMMKS-RIQQLEGELSRMTQE 179
Query: 256 LENLRETVIQK---CRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVD 312
+ N R+ +K R M+ EEKK L + +L DL + + IV +++
Sbjct: 180 V-NERQGKGEKALDARPMTMEEKKALSMEINQLKGSDLEEVVRIVWGQMAGEQMQQNDIE 238
Query: 313 LDMDAQSELTLWRLKVFV---QESLKAASR 339
LD+ A TL +L+ ++ +E+ KA R
Sbjct: 239 LDLSAMPNETLRKLERYIVQCKEAKKAPKR 268
>gi|148725667|emb|CAN87975.1| novel protein (zgc:77289) [Danio rerio]
Length = 729
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|392332962|ref|XP_003752750.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
gi|149028625|gb|EDL83966.1| bromodomain, testis-specific [Rattus norvegicus]
Length = 947
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +IE PMD STIK +++
Sbjct: 25 GRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLEN 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 85 R---YYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|426020760|sp|D4A7T3.1|BRDT_RAT RecName: Full=Bromodomain testis-specific protein
Length = 952
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +IE PMD STIK +++
Sbjct: 25 GRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLEN 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 85 R---YYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|410919159|ref|XP_003973052.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 590
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ AWPF PVDV LGLHDY+++I++PMD STI+ KMD + Y E ADVRL+
Sbjct: 287 HYACAWPFYSPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGE---YAQPAEFAADVRLM 343
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N KYN +V MA+ L E FE +++++
Sbjct: 344 FSNCYKYNPPSHEVVHMARKLQEVFEARYVKV 375
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H ++WPF PVD LGL DYY VI PMD STI ++
Sbjct: 49 GRVTNQLNYLEKVVIKALWRHHFSWPFQRPVDAVALGLPDYYTVITNPMDLSTIMMRLKN 108
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
K Y E D+ +F N YN D + MA++ LEK ++ L L+PK E K
Sbjct: 109 KY---YWQALECIQDLNTMFSNCYVYNQPGDGIVFMAQT-LEKLCQEKLTLMPKPECEAK 164
Query: 218 RQEEEE 223
++ E
Sbjct: 165 GRKMSE 170
>gi|392352984|ref|XP_003751370.1| PREDICTED: bromodomain testis-specific protein [Rattus norvegicus]
Length = 947
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVDV+ LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDVDALGLHNYYDIVKNPMDLGTIKGKMDKQE---YKDACEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +IE PMD STIK +++
Sbjct: 25 GRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLEN 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 85 R---YYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
>gi|21594670|gb|AAH32124.1| BRD3 protein [Homo sapiens]
gi|119608520|gb|EAW88114.1| bromodomain containing 3, isoform CRA_b [Homo sapiens]
Length = 556
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|390466206|ref|XP_003733541.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Callithrix jacchus]
Length = 932
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 267 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 326
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
++ Y++ E ADVRL+F N KYN +V MA+ L + FE +
Sbjct: 327 NQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 372
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ I + + +H ++WPF PVD L
Sbjct: 3 LSSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVILKDLWKHDFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L E F +K Q+
Sbjct: 120 QALEELFMQKLSQM 133
>gi|8978291|dbj|BAA98182.1| unnamed protein product [Arabidopsis thaliana]
Length = 643
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HKWAW F PVDV GLGLHDY++V++KPMD T+K + D Y + +
Sbjct: 231 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNL---DKGFYVSPIDFA 287
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
DVRL F NAM YN + DV+ MA LL+ F+
Sbjct: 288 TDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 319
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ EEK LG L L PE L + L+I+ + N E++LD++A TLW L
Sbjct: 457 RLMTMEEKSKLGMNLQDLPPEKLGQLLQILRKRNGHLAQDGDEIELDIEAVDNETLWELD 516
Query: 328 VFVQESLKAASR 339
FV K AS+
Sbjct: 517 RFVTNYKKMASK 528
>gi|218199690|gb|EEC82117.1| hypothetical protein OsI_26141 [Oryza sativa Indica Group]
Length = 484
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQ +I +++ HK W F PVD G+ DY++VI PMD T+K K+ K Y N
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQ---YSN 119
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 120 PYEFAADVRLTFSNAMKYNPPGNDVHAIADQLNKIFDSEW 159
>gi|308198663|pdb|3ONI|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd2
In Complex With The Inhibitor Jq1
Length = 114
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 27 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 83
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 84 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 112
>gi|148725668|emb|CAN87976.1| novel protein (zgc:77289) [Danio rerio]
Length = 664
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|194388908|dbj|BAG61471.1| unnamed protein product [Homo sapiens]
Length = 405
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N
Sbjct: 9 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSN 65
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 66 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 94
>gi|354501565|ref|XP_003512861.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Cricetulus
griseus]
Length = 744
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Query: 212 VME 214
ME
Sbjct: 419 PME 421
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|241604623|ref|XP_002405922.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
gi|215502589|gb|EEC12083.1| bromodomain-containing protein 2, brd2, putative [Ixodes
scapularis]
Length = 885
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGLHDY+E+I+ PMD T+K KMD ++ Y++ E DVRL+F N
Sbjct: 415 YAWPFYKPVDADLLGLHDYHEIIKHPMDLGTVKQKMDNRE---YKSPEEFAGDVRLIFTN 471
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 229
KYN +V MA+ L + FE ++ + M +E Q + +Q D
Sbjct: 472 CYKYNPPDHEVVAMARKLQDVFEMRYAK-----MPDEPPQSDPAPVSQTD 516
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + I +H++AWPF PVD L L DY+ +I+ PMD TIK ++
Sbjct: 34 RNTNQLQYLLRVVMKAIWKHQFAWPFQQPVDTVRLNLPDYHRIIDHPMDLGTIKKRL--- 90
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
+ Y + E D +F N YN +DV +MA++L + F
Sbjct: 91 ENYYYASASECIQDFNTMFTNCYVYNKPGEDVVLMAQALEKLF 133
>gi|224013522|ref|XP_002296425.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968777|gb|EED87121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1718
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+LK + I R++ H+ W F PVD LGL DY++VI+KPMD TI ++D +G+
Sbjct: 830 KLKLKCVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLD--NGS- 886
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + +DVRL F+NAMKYNDE VH MAK L +KF+ + +L+ K +E+E R+
Sbjct: 887 YHAFDDFKSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLM-KQLEKEHRE 942
>gi|67967916|dbj|BAE00440.1| unnamed protein product [Macaca fascicularis]
Length = 609
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARRLQDVFETHFSKIPVEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSGASEDERVQRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|338797768|ref|NP_001229739.1| bromodomain testis-specific protein isoform d [Homo sapiens]
gi|119593515|gb|EAW73109.1| bromodomain, testis-specific, isoform CRA_b [Homo sapiens]
Length = 874
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 254
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 255 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 311
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 312 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 371
Query: 264 IQK 266
+K
Sbjct: 372 FRK 374
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 206 LQL 208
Q+
Sbjct: 58 SQM 60
>gi|403284014|ref|XP_003933383.1| PREDICTED: bromodomain testis-specific protein [Saimiri boliviensis
boliviensis]
Length = 1132
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 453 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 512
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
++ Y++ E ADVRL+F N KYN +V MA+ L + FE +
Sbjct: 513 NQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHF 558
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ I + + +H +WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 208 GRLTNQLQYLQKVILKDLWKHDLSWPFQRPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEN 267
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L E F +K Q+
Sbjct: 268 K---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEELFMQKLSQM 315
>gi|134105429|pdb|2OUO|A Chain A, Crystal Structure Of The Bromo Domain 2 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|340707485|pdb|2YEM|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|340707486|pdb|2YEM|B Chain B, Crystal Structure Of The Second Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
Length = 130
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 42 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 98
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 99 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 127
>gi|165972335|ref|NP_001107046.1| bromodomain-containing protein 3 isoform 1 [Mus musculus]
gi|62485072|dbj|BAD91008.2| Orfx [Mus musculus]
gi|148676418|gb|EDL08365.1| bromodomain containing 3, isoform CRA_a [Mus musculus]
Length = 743
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|354501563|ref|XP_003512860.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Cricetulus
griseus]
gi|344252302|gb|EGW08406.1| Bromodomain-containing protein 3 [Cricetulus griseus]
Length = 727
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Query: 212 VME 214
ME
Sbjct: 419 PME 421
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|148676419|gb|EDL08366.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
gi|148676420|gb|EDL08367.1| bromodomain containing 3, isoform CRA_b [Mus musculus]
Length = 731
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 306 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 365
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 366 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 422
Query: 212 VME 214
ME
Sbjct: 423 PME 425
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 37 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 94
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 144
>gi|73959570|ref|XP_867048.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Canis
lupus familiaris]
Length = 668
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHLSYAWPFYNPVDVHALGLHNYYDIVKNPMDLGTIKGKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ E ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 328 NQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 376
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 25 GRLTNQLQYLQKIVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEH 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D ++F N YN DD+ +MA++L + F +K Q+
Sbjct: 85 K---YYVRASECIEDFNIMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|21594631|gb|AAH31536.1| Bromodomain containing 3 [Mus musculus]
Length = 726
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|165972331|ref|NP_001107045.1| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|165972333|ref|NP_075825.3| bromodomain-containing protein 3 isoform 2 [Mus musculus]
gi|47115837|sp|Q8K2F0.2|BRD3_MOUSE RecName: Full=Bromodomain-containing protein 3; AltName:
Full=Bromodomain-containing FSH-like protein FSRG2
gi|74141421|dbj|BAE35988.1| unnamed protein product [Mus musculus]
gi|74195657|dbj|BAE39636.1| unnamed protein product [Mus musculus]
gi|74204674|dbj|BAE35406.1| unnamed protein product [Mus musculus]
gi|148676422|gb|EDL08369.1| bromodomain containing 3, isoform CRA_d [Mus musculus]
Length = 726
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|380792435|gb|AFE68093.1| bromodomain-containing protein 3, partial [Macaca mulatta]
Length = 508
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMDG++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDGRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|262189359|gb|ACY30377.1| BRD2 [Salmo salar]
Length = 824
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G+ Q+L R I +++ K +AWPF PVD LGLHDY+++I++PMD STIK K
Sbjct: 376 GKLSQQL-RYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRK 434
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
MD ++ YR+ ++ DVR+++ N KYN DV MA+ L + FE
Sbjct: 435 MDSRE---YRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R+ A ++Q L+R A+ + + +H +AWPF PVD L L DY+++I++PMD TIK
Sbjct: 73 RQGRATNQLQFLQR---AMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIK 129
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+++ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 130 RRLENNY---YRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|159164570|pdb|2G4A|A Chain A, Solution Structure Of A Bromodomain From Ring3 Protein
Length = 116
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD ST+K KM+ +D YR+ +E ADVRL+F N
Sbjct: 21 YAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRKMENRD---YRDAQEFAADVRLMFSN 77
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 78 CYKYNPPDHDVVAMARKLQDVFEFRYAKM 106
>gi|432910838|ref|XP_004078550.1| PREDICTED: bromodomain-containing protein 2-like [Oryzias latipes]
Length = 830
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD STIK KMD ++ YR+ ++ +DVRL+F N
Sbjct: 404 YAWPFYTPVDAAALGLHDYHDIIKCPMDLSTIKRKMDCRE---YRDAQQFASDVRLMFSN 460
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE + ++
Sbjct: 461 CYKYNPPDHDVVGMARKLQDVFEFSFAKM 489
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD L L DYY++I++PMD TIK ++
Sbjct: 83 GRMTNQLQYLQKTLMKCLWRHEFAWPFHEPVDAYRLKLPDYYKIIKQPMDMGTIKKRL-- 140
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + YR+ E D +F N YN +DD+ +MA+SL + F +K Q+
Sbjct: 141 -ENSFYRSASECIQDFNTMFTNCYIYNKPKDDIVLMAQSLEKIFLQKVAQM 190
>gi|395759239|pdb|2LSP|B Chain B, Solution Structures Of Brd4 Second Bromodomain With
Nf-Kb-K310ac Peptide
Length = 128
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 40 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 96
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 97 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 125
>gi|297279234|ref|XP_001100884.2| PREDICTED: bromodomain testis-specific protein-like [Macaca
mulatta]
Length = 983
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 304 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 363
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 364 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 420
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 421 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 480
Query: 264 IQK 266
+K
Sbjct: 481 FRK 483
>gi|218191119|gb|EEC73546.1| hypothetical protein OsI_07959 [Oryza sativa Indica Group]
Length = 714
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K + F PVD L + DY+++I+KPMD TI+NK+ D Y +
Sbjct: 169 KQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTS 225
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
E ADVRL F NAM YN VH A L + FE +W + +E++ EA
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAH 280
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTA 281
++D + + K + +EV + E++R T K KM+ EEK++ G
Sbjct: 281 VEVDR------ADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNC 333
Query: 282 LTRLS-----PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
L LS P + L+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 334 LASLSEDPEVPSHIIDLLQQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|325190099|emb|CCA24581.1| histone acetyltransferase putative [Albugo laibachii Nc14]
Length = 2117
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M +LK++ + + + +HK+ W F PVD L + DY+ I +PMD TIK K+D
Sbjct: 1090 MPQLKKRLEVLLKGMMEHKFGWVFSSPVDTVALEIPDYFRTIRRPMDLGTIKKKLDLG-- 1147
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 220
Y++++ +DVRL F NA YN E DVH +AK +L F ++ +L + E+E+ Q
Sbjct: 1148 -FYKHIQHFASDVRLTFNNAKLYNSEGSDVHNLAKDMLNDFNVEFRKLEIDINEQERLQR 1206
Query: 221 EEEAKAQL 228
+EA +L
Sbjct: 1207 LKEAACRL 1214
>gi|149039214|gb|EDL93434.1| bromodomain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197246453|gb|AAI68949.1| Brd3 protein [Rattus norvegicus]
Length = 742
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Query: 212 VME 214
ME
Sbjct: 419 PME 421
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|115447147|ref|NP_001047353.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|47497295|dbj|BAD19337.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848299|dbj|BAD22163.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|113536884|dbj|BAF09267.1| Os02g0601800 [Oryza sativa Japonica Group]
gi|222623188|gb|EEE57320.1| hypothetical protein OsJ_07416 [Oryza sativa Japonica Group]
Length = 714
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K + F PVD L + DY+++I+KPMD TI+NK+ D Y +
Sbjct: 169 KQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTS 225
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
E ADVRL F NAM YN VH A L + FE +W + +E++ EA
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAH 280
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTA 281
++D + + K + +EV + E++R T K KM+ EEK++ G
Sbjct: 281 VEVDR------ADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNC 333
Query: 282 LTRLS-----PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
L LS P + L+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 334 LASLSEDPEVPSHIIDLLQQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|157819431|ref|NP_001102045.1| bromodomain-containing protein 3 [Rattus norvegicus]
gi|149039215|gb|EDL93435.1| bromodomain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 725
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 418
Query: 212 VME 214
ME
Sbjct: 419 PME 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|440906896|gb|ELR57110.1| Bromodomain testis-specific protein [Bos grunniens mutus]
Length = 964
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
A ++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK
Sbjct: 263 AKNAKVTEQLRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIK 322
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KMD ++ Y++ E ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 323 AKMDNQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEMHFAKI 375
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 25 GRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEH 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 85 K---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 132
>gi|63100514|gb|AAH95027.1| Brd3a protein [Danio rerio]
Length = 513
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
GRR ++LK I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+K K
Sbjct: 290 GRRSEQLKY-CDVILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKK 348
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
MD ++ Y++ + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 349 MDSRE---YQDAQTFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + +H++AWPF PVD LGL DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVETLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y + E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 87 -ESVYYYSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|338797757|ref|NP_001229735.1| bromodomain testis-specific protein isoform a [Homo sapiens]
Length = 951
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 272 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 331
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 332 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 388
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 389 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 448
Query: 264 IQK 266
+K
Sbjct: 449 FRK 451
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQ 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|221044398|dbj|BAH13876.1| unnamed protein product [Homo sapiens]
Length = 951
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 272 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 331
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 332 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 388
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 389 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 448
Query: 264 IQK 266
+K
Sbjct: 449 FRK 451
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKNLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|47086635|ref|NP_997867.1| bromodomain-containing protein 3 [Danio rerio]
gi|41944567|gb|AAH65949.1| Bromodomain containing 3b [Danio rerio]
Length = 664
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|13699186|dbj|BAB41205.1| kinase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 714
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K + F PVD L + DY+++I+KPMD TI+NK+ D Y +
Sbjct: 169 KQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKL---DSGSYTS 225
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
E ADVRL F NAM YN VH A L + FE +W + +E++ EA
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAH 280
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTA 281
++D + + K + +EV + E++R T K KM+ EEK++ G
Sbjct: 281 VEVDR------ADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNC 333
Query: 282 LTRLS-----PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
L LS P + L+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 334 LASLSEDPEVPSHIIDLLQQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|440904692|gb|ELR55166.1| Bromodomain-containing protein 3, partial [Bos grunniens mutus]
Length = 613
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGR--RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG+ R+ E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 231 AGKKGRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 290
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 291 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 344
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 137 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 196
DY+++I+ PMD TIK +++ Y + E D +F N YN DD+ +MA++
Sbjct: 1 DYHKIIKNPMDMGTIKKRLEN---NYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 57
Query: 197 LLEKFEEKWLQL 208
L + F +K Q+
Sbjct: 58 LEKIFLQKVAQM 69
>gi|33355659|gb|AAQ16198.1| testis-specific BRDT protein [Homo sapiens]
Length = 960
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 281 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 340
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 341 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 397
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 398 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 457
Query: 264 IQK 266
+K
Sbjct: 458 FRK 460
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 16 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 75
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 76 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 132
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 133 QALEKLFMQKLSQM 146
>gi|410926019|ref|XP_003976476.1| PREDICTED: bromodomain-containing protein 3-like [Takifugu
rubripes]
Length = 820
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 409 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 465
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 466 CYKYNPPDHDVVAMARKLQDVFE 488
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 75 GRMTNQLQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRLEN 134
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 135 NY---YRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|338797761|ref|NP_001229737.1| bromodomain testis-specific protein isoform c [Homo sapiens]
gi|338797763|ref|NP_001229736.1| bromodomain testis-specific protein isoform c [Homo sapiens]
Length = 901
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 338
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 339 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 398
Query: 264 IQK 266
+K
Sbjct: 399 FRK 401
>gi|221046272|dbj|BAH14813.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 338
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 339 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 398
Query: 264 IQK 266
+K
Sbjct: 399 FRK 401
>gi|8575733|gb|AAF78072.1| bromodomain-containing FSH-like protein FSRG2 [Mus musculus]
gi|46241516|gb|AAS82951.1| endothelial differentiation inhibitory protein D18 [Mus musculus]
Length = 726
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|355745448|gb|EHH50073.1| hypothetical protein EGM_00839, partial [Macaca fascicularis]
Length = 957
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 279 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 338
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 339 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 395
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 396 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 455
Query: 264 IQK 266
+K
Sbjct: 456 FRK 458
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 14 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 73
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 74 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 130
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 131 QALEKLFVQKLSQM 144
>gi|148362124|gb|ABQ59651.1| BRD2 [Salmo salar]
gi|148362144|gb|ABQ59668.1| BRD2 [Salmo salar]
Length = 824
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G+ Q+L R I +++ K +AWPF PVD LGLHDY+++I++PMD STIK K
Sbjct: 376 GKLSQQL-RYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRK 434
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
MD ++ YR+ ++ DVR+++ N KYN DV MA+ L + FE
Sbjct: 435 MDSRE---YRDAQQFAGDVRIMYSNCYKYNPPDHDVVTMARKLQDVFE 479
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R+ A ++Q L+R A+ + + +H +AWPF PVD L L DY+++I++PMD TIK
Sbjct: 73 RQGRATNQLQFLQR---AMMKSLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIK 129
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+++ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 130 RRLENNY---YRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|119593512|gb|EAW73106.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593513|gb|EAW73107.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593514|gb|EAW73108.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593516|gb|EAW73110.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|119593517|gb|EAW73111.1| bromodomain, testis-specific, isoform CRA_a [Homo sapiens]
gi|208965898|dbj|BAG72963.1| bromodomain, testis-specific [synthetic construct]
Length = 947
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|146147391|gb|ABQ01994.1| bromodomain containing 2 [Salmo salar]
gi|148362147|gb|ABQ59670.1| BRD2 [Salmo salar]
Length = 815
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G+ Q+L R I +++ K +AWPF PVD LGLHDY+++I++PMD STIK K
Sbjct: 372 GKLGQQL-RYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRK 430
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
MD ++ YR+ ++ DVR+++ N KYN DV MA+ L + FE
Sbjct: 431 MDSRE---YRDAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFE 475
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R+ A ++Q L+R A+ + + +H +AWPF PVD L L DY+++I++PMD TIK
Sbjct: 73 RQGRATNQLQFLQR---AMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIK 129
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+++ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 130 RRLENNY---YRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|221044240|dbj|BAH13797.1| unnamed protein product [Homo sapiens]
Length = 901
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 338
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 339 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 398
Query: 264 IQK 266
+K
Sbjct: 399 FRK 401
>gi|46399198|ref|NP_001717.2| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|46399200|ref|NP_997072.1| bromodomain testis-specific protein isoform b [Homo sapiens]
gi|338797755|ref|NP_001229734.1| bromodomain testis-specific protein isoform b [Homo sapiens]
Length = 947
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQ 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|226694198|sp|Q58F21.4|BRDT_HUMAN RecName: Full=Bromodomain testis-specific protein; AltName:
Full=Cancer/testis antigen 9; Short=CT9; AltName:
Full=RING3-like protein
gi|108752098|gb|AAI11928.1| BRDT protein [synthetic construct]
gi|110645559|gb|AAI18499.1| BRDT protein [synthetic construct]
Length = 947
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQ 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|47216871|emb|CAG11678.1| unnamed protein product [Tetraodon nigroviridis]
Length = 834
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 423 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 479
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV MA+ L + FE
Sbjct: 480 CYKYNPPDHDVVAMARKLQDVFE 502
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 46 GRMTNQLQFLQKVLLKSLWRHHFAWPFHEPVDAVKLNLPDYHKIIKTPMDMGTIKKRL-- 103
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 104 -ENNYYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 153
>gi|402855238|ref|XP_003892238.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Papio
anubis]
gi|402855240|ref|XP_003892239.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Papio
anubis]
Length = 899
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 338
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 339 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 398
Query: 264 IQK 266
+K
Sbjct: 399 FRK 401
>gi|185134173|ref|NP_001117185.1| bromodomain containing 2 [Salmo salar]
gi|148362162|gb|ABQ59684.1| BRD2 [Salmo salar]
Length = 815
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 7/108 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G+ Q+L R I +++ K +AWPF PVD LGLHDY+++I++PMD STIK K
Sbjct: 372 GKLGQQL-RYCNGILKELLSKKHAAYAWPFYKPVDASMLGLHDYHDIIKQPMDLSTIKRK 430
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
MD ++ YR+ ++ DVR+++ N KYN DV MA+ L + FE
Sbjct: 431 MDSRE---YRDAQQFAGDVRIMYSNCYKYNPPDHDVVAMARKLQDVFE 475
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 93 REEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
R+ A ++Q L+R A+ + + +H +AWPF PVD L L DY+++I++PMD TIK
Sbjct: 73 RQGRATNQLQFLQR---AMMKYLWRHHFAWPFHEPVDASKLSLPDYHKIIKQPMDMGTIK 129
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+++ YR+ E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 130 RRLENNY---YRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLEKAFLQKVAQM 182
>gi|425906067|sp|Q4R8Y1.3|BRDT_MACFA RecName: Full=Bromodomain testis-specific protein
Length = 947
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFVQKLSQM 133
>gi|402855232|ref|XP_003892235.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Papio
anubis]
gi|402855234|ref|XP_003892236.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Papio
anubis]
gi|402855236|ref|XP_003892237.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Papio
anubis]
Length = 945
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|355558166|gb|EHH14946.1| hypothetical protein EGK_00962, partial [Macaca mulatta]
Length = 897
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 275 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 334
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 335 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESM 391
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 392 PLCYIKTDITETTGRENTNEASSEGNSSGDSEDERVQRLAKLQEQLKAVHQQLQVLSQVP 451
Query: 264 IQK 266
+K
Sbjct: 452 FRK 454
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 10 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 69
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 70 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 126
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 127 QALEKLFMQKLSQM 140
>gi|47497296|dbj|BAD19338.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|47848300|dbj|BAD22164.1| putative global transcription factor group E [Oryza sativa Japonica
Group]
gi|215768414|dbj|BAH00643.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 480
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 117/239 (48%), Gaps = 25/239 (10%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K + F PVD L + DY+++I+KPMD TI+NK+D Y +
Sbjct: 169 KQCDAILKKLMTQKCSNIFDSPVDAVKLNIPDYFQIIKKPMDLGTIRNKLDSG---SYTS 225
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
E ADVRL F NAM YN VH A L + FE +W + +E++ EA
Sbjct: 226 PSEFAADVRLTFSNAMTYNPRGHVVHDYAIQLNKMFESRW-----RTIEKKLASIATEAH 280
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQL----ENLRETVIQKCRKMSTEEKKNLGTA 281
++D + + K + +EV + E++R T K KM+ EEK++ G
Sbjct: 281 VEVDR------ADSKRRKTPPVDCSEVSTECVRPTESVRPTESVK-PKMTFEEKESFGNC 333
Query: 282 LTRLS-----PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
L LS P + L+ +NN + E+++D+ A S+ L+ LK V + L+
Sbjct: 334 LASLSEDPEVPSHIIDLLQQCIDNN-TDQLGDGEIEIDIHAVSDDLLFELKKHVDKYLQ 391
>gi|157126758|ref|XP_001654739.1| hypothetical protein AaeL_AAEL002090 [Aedes aegypti]
gi|108882525|gb|EAT46750.1| AAEL002090-PA, partial [Aedes aegypti]
Length = 506
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E ADVRL+F N
Sbjct: 340 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSANEFAADVRLIFTN 396
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN DV M + L + FE
Sbjct: 397 CYKYNPPDHDVVAMGRKLQDVFE 419
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H+++WPF PVD + L L DY+++I++PMD TIK ++
Sbjct: 11 GRLTNQLHFLLKTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL-- 68
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y +E D ++F N YN +DV VMA++L + F K + L+PK
Sbjct: 69 -ENNYYWTSKESIQDFNIMFSNCYVYNKPGEDVVVMAQALEKLFLTK-VSLMPK 120
>gi|115472285|ref|NP_001059741.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|33146482|dbj|BAC79591.1| putative RING3 protein [Oryza sativa Japonica Group]
gi|113611277|dbj|BAF21655.1| Os07g0507700 [Oryza sativa Japonica Group]
gi|215717115|dbj|BAG95478.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 484
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQ +I +++ HK W F PVD G+ DY++VI PMD T+K K+ K Y N
Sbjct: 63 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQ---YSN 119
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 120 PYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 159
>gi|222637108|gb|EEE67240.1| hypothetical protein OsJ_24385 [Oryza sativa Japonica Group]
Length = 536
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQ +I +++ HK W F PVD G+ DY++VI PMD T+K K+ K Y N
Sbjct: 115 RQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLGTVKRKLTSKQ---YSN 171
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAMKYN +DVH +A L + F+ +W
Sbjct: 172 PYEFAADVRLTFSNAMKYNPPGNDVHGIADQLNKIFDSEW 211
>gi|410033225|ref|XP_003949509.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 797
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 254
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 255 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYMKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 206 LQL 208
Q+
Sbjct: 58 SQM 60
>gi|2554915|gb|AAB87862.1| BRDT [Homo sapiens]
Length = 947
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYSFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|296482055|tpg|DAA24170.1| TPA: bromodomain containing protein 3 [Bos taurus]
Length = 722
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGR--RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG+ R+ E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|426218805|ref|XP_004003627.1| PREDICTED: bromodomain testis-specific protein [Ovis aries]
Length = 969
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 302 KVTEQLRHCSEILKEMLGKKHLSYAWPFYNPVDVNALGLHNYYDIVKTPMDLGTIKAKMD 361
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ E ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 362 NQE---YKDAYEFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFEVHFAKI 410
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 60 GRLTNQLQYLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKNPMDLNTIKKRLEH 119
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 120 K---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFRQKLSQM 167
>gi|390352956|ref|XP_003728006.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + GLHDY+E+I+ PMD TIK K++ +D Y+N + ADVRL+F+N
Sbjct: 440 YAWPFFKPVDADVFGLHDYHEIIKTPMDMGTIKVKLENRD---YKNANDFAADVRLIFRN 496
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +DV MA+ L FE K+ ++
Sbjct: 497 CYKYNPRDNDVVKMARKLENVFEVKFAKI 525
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF HPVD L L DYY++I+ PMD TIK ++
Sbjct: 196 GRQTNQLQYLQKVVLKALWKHQFAWPFHHPVDPTKLALPDYYKIIKTPMDLGTIKKRL-- 253
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + +E +D +LVF N ++ +DV +MA++L + F K Q+
Sbjct: 254 -ESIYYHSAKECISDFKLVFTNCYLHDKPGEDVVLMAQALEKLFLTKVAQM 303
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 137 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 196
DY ++I+ PMD TIK +++ Y + +E +D LVF N +N +DV MA++
Sbjct: 1 DYLKIIKTPMDLGTIKKRLES---IYYHSAKECISDFNLVFTNCYLHNKPGEDVVFMAQA 57
Query: 197 LLEKFEEKWLQL 208
L + F K Q+
Sbjct: 58 LEKLFLTKVAQM 69
>gi|157834826|pdb|2DVV|A Chain A, Crystal Structure Of The Second Bromodomain Of The Human
Brd2 Protein
gi|162329881|pdb|2E3K|A Chain A, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329882|pdb|2E3K|B Chain B, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329883|pdb|2E3K|C Chain C, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
gi|162329884|pdb|2E3K|D Chain D, Crystal Structure Of The Human Brd2 Second Bromodomain In
Complexed With The Acetylated Histone H4 Peptide
Length = 112
Score = 94.0 bits (232), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G M++LK I +++ K +AWPF PVD LGLHDY+++I+ PMD ST+K K
Sbjct: 1 GSHMEQLK-HCNGILKELLSKKHAAYAWPFYKPVDASALGLHDYHDIIKHPMDLSTVKRK 59
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
M+ +D YR+ +E ADVRL+F N KYN DV MA+ L + FE ++ ++
Sbjct: 60 MENRD---YRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQDVFEFRYAKM 110
>gi|116003963|ref|NP_001070341.1| bromodomain-containing protein 3 [Bos taurus]
gi|115305162|gb|AAI23579.1| Bromodomain containing 3 [Bos taurus]
Length = 722
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGR--RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG+ R+ E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGRLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|348574826|ref|XP_003473191.1| PREDICTED: bromodomain-containing protein 3-like [Cavia porcellus]
Length = 725
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWRHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ T Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENTYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|15232127|ref|NP_189362.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|327488239|sp|Q9LK27.2|GTE8_ARATH RecName: Full=Transcription factor GTE8; AltName:
Full=Bromodomain-containing protein GTE8; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E8
gi|332643763|gb|AEE77284.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 813
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 39/246 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + R++ H +W F PVDV L + DY I+ PMD T+K + +G
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGV 231
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPK 211
Y + E ADVRL F NAM YN DVH+M L + FE +W +Q LP
Sbjct: 232 YSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPA 291
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 271
V E +E KA + +V K +++ S +RE+V + + +
Sbjct: 292 VTLEPN----DERKAAI-------SVPPAKKRKMASP----------VRESVPEPVKPLM 330
Query: 272 TE-EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVF 329
TE E+ LG L L E ++ + ++N + A+ E+++D+D S+ L L+
Sbjct: 331 TEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNL 390
Query: 330 VQESLK 335
+ E ++
Sbjct: 391 LDEYIQ 396
>gi|397473969|ref|XP_003808466.1| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
paniscus]
gi|397473971|ref|XP_003808467.1| PREDICTED: bromodomain testis-specific protein isoform 5 [Pan
paniscus]
Length = 901
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|9294219|dbj|BAB02121.1| unnamed protein product [Arabidopsis thaliana]
Length = 818
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 39/246 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + R++ H +W F PVDV L + DY I+ PMD T+K + +G
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGV 231
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPK 211
Y + E ADVRL F NAM YN DVH+M L + FE +W +Q LP
Sbjct: 232 YSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPA 291
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 271
V E +E KA + +V K +++ S +RE+V + + +
Sbjct: 292 VTLEPN----DERKAAI-------SVPPAKKRKMASP----------VRESVPEPVKPLM 330
Query: 272 TE-EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVF 329
TE E+ LG L L E ++ + ++N + A+ E+++D+D S+ L L+
Sbjct: 331 TEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNL 390
Query: 330 VQESLK 335
+ E ++
Sbjct: 391 LDEYIQ 396
>gi|351702676|gb|EHB05595.1| Bromodomain-containing protein 2 [Heterocephalus glaber]
Length = 722
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 266 KLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 325
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 326 SRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 374
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y + E
Sbjct: 5 VVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL---ENNYYWSASECM 61
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 62 QDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 99
>gi|334185652|ref|NP_001189985.1| global transcription factor group E8 [Arabidopsis thaliana]
gi|332643764|gb|AEE77285.1| global transcription factor group E8 [Arabidopsis thaliana]
Length = 764
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 39/246 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + R++ H +W F PVDV L + DY I+ PMD T+K + +G
Sbjct: 127 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGV 182
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPK 211
Y + E ADVRL F NAM YN DVH+M L + FE +W +Q LP
Sbjct: 183 YSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPA 242
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 271
V E +E KA + +V K +++ S +RE+V + + +
Sbjct: 243 VTLEPN----DERKAAI-------SVPPAKKRKMASP----------VRESVPEPVKPLM 281
Query: 272 TE-EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVF 329
TE E+ LG L L E ++ + ++N + A+ E+++D+D S+ L L+
Sbjct: 282 TEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNL 341
Query: 330 VQESLK 335
+ E ++
Sbjct: 342 LDEYIQ 347
>gi|156230233|gb|AAI51887.1| Brd3b protein [Danio rerio]
Length = 500
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + ADVRL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADVRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|426330336|ref|XP_004026173.1| PREDICTED: bromodomain testis-specific protein [Gorilla gorilla
gorilla]
Length = 883
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVD+ LGLH+YY++++ PMD TIK KMD
Sbjct: 205 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDINALGLHNYYDIVKNPMDLGTIKEKMD 264
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 265 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 321
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 322 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 381
Query: 264 IQK 266
+K
Sbjct: 382 FRK 384
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 137 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 196
DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA++
Sbjct: 2 DYYTIIKNPMDLNTIKKRLENK---YYGKASECIEDFNTMFSNCYLYNKPGDDIVLMAQA 58
Query: 197 LLEKFEEKWLQL 208
L + F +K Q+
Sbjct: 59 LEKLFMQKLSQM 70
>gi|410903440|ref|XP_003965201.1| PREDICTED: bromodomain-containing protein 2-like [Takifugu
rubripes]
Length = 546
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD L L+DY+++I+ PMD ST+K K+D + Y N ADV+L+F N
Sbjct: 264 YAWPFYEPVDAVALQLNDYHDIIKHPMDLSTVKRKLDRGE---YPNADSFAADVQLIFSN 320
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
KYN +V AK L FE+ + K+ +E + + A LT+E
Sbjct: 321 CYKYNPSHLEVVAHAKKLQGVFEKSFA----KIPDEPTGTGQAQTAAFGKSDLTEEGA-- 374
Query: 240 NKAKELRSELNEVDMQLENLRETVI----------------------------------- 264
+ EL+ ++ V L + E +
Sbjct: 375 TRLAELQEQVKAVPDHLAAISEVPVNKRKRKDDESKTDRQTRGSPTSDPGSPCKLKTWDP 434
Query: 265 -QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEVDLDMDAQSELT 322
KC ++ EEK L + RL + L + ++I+ PS T E+++D + T
Sbjct: 435 DNKCLPLTYEEKHQLSLDINRLPGKKLGRVVQIIQTLEPSMCETNPDEIEIDFEVLKPST 494
Query: 323 LWRLKVFVQESL 334
L RL+ +V++ L
Sbjct: 495 LRRLQQYVKKCL 506
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GRR +L+ + + + +H +AWPF PVD GLGL DY+++I PMD TIK ++
Sbjct: 26 GRRTNQLQYMQNIVVKSLWRHHYAWPFYEPVDAVGLGLADYHKIITSPMDLGTIKKRL-- 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA +L + F +K Q+
Sbjct: 84 -ENNYYWTASECLQDFNTMFTNCYIYNKPTDDIVLMALTLEKIFLQKVAQM 133
>gi|332809506|ref|XP_003339041.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
gi|332809508|ref|XP_003308259.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
troglodytes]
Length = 824
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 282 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|357447117|ref|XP_003593834.1| Bromodomain-containing factor [Medicago truncatula]
gi|355482882|gb|AES64085.1| Bromodomain-containing factor [Medicago truncatula]
Length = 520
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
A I + + H ++W F PVD L + DY+ VI PMD TIK K+D Y + E
Sbjct: 84 ATILKCLISHPYSWVFKTPVDPVALNIPDYFTVISHPMDLGTIKFKLDK---NIYYSKEE 140
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQL 228
ADVRL F NAM YN +DVH+MAK L + FE KW K M+++ E+E K++
Sbjct: 141 FAADVRLTFSNAMTYNPPSNDVHLMAKELNKLFERKW-----KDMDKKWNFEDEHEKSET 195
Query: 229 DM 230
M
Sbjct: 196 GM 197
>gi|343962325|dbj|BAK62750.1| bromodomain testis-specific protein [Pan troglodytes]
Length = 947
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYMKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|397473963|ref|XP_003808463.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
paniscus]
gi|397473965|ref|XP_003808464.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Pan
paniscus]
gi|397473967|ref|XP_003808465.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Pan
paniscus]
Length = 947
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|332809502|ref|XP_524767.3| PREDICTED: bromodomain testis-specific protein isoform 4 [Pan
troglodytes]
gi|332809504|ref|XP_003308258.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Pan
troglodytes]
gi|410033223|ref|XP_003949508.1| PREDICTED: bromodomain testis-specific protein [Pan troglodytes]
Length = 870
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYMKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|296191127|ref|XP_002743521.1| PREDICTED: bromodomain-containing protein 3 [Callithrix jacchus]
Length = 1364
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 70 IAKEKLKDRHVASIEKQQQDAFHREEAAGR-RMQELKRQFAAIFRQITQHK---WAWPFM 125
+A+ + R + +K +D + A + ++ E R +I R++ K +AWPF
Sbjct: 917 VARRESGGRPIKPPKKDLEDGEVPQHAGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFY 976
Query: 126 HPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYND 185
PVD E L LHDY+++I+ PMD ST+K KMDG++ Y + + ADVRL+F N KYN
Sbjct: 977 KPVDAEALELHDYHDIIKHPMDLSTVKRKMDGRE---YPDAQGFAADVRLMFSNCYKYNP 1033
Query: 186 ERDDVHVMAKSLLEKFEEKWLQL 208
+V MA+ L + FE ++ ++
Sbjct: 1034 PDHEVVAMARKLQDVFEMRFAKM 1056
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 674 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 731
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 732 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 781
Score = 43.1 bits (100), Expect = 0.26, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 17/188 (9%)
Query: 211 KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKM 270
KV K+ ++++A A+ T Q K + S + + + E L M
Sbjct: 1160 KVAPPAKQAQQKKAPAKKANSTTAAGRQLKKGGKQASASYDSEEEEEGL---------PM 1210
Query: 271 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATAQEVDLDMDAQSELTLWRLKVF 329
S +EK+ L + RL E L + + I+ PS + E+++D + TL L+ +
Sbjct: 1211 SYDEKRQLSLDINRLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELERY 1270
Query: 330 VQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDALA---KPAVK 386
V+ L+ R G ++++ + +K K KR +++ L+ KPA K
Sbjct: 1271 VKSCLQKKQRKPFSASGKKQA----AKSKEELAQEKKKELEKRLQDVSGQLSSSKKPARK 1326
Query: 387 RTKKLPPN 394
P+
Sbjct: 1327 EKPGSAPS 1334
>gi|413937647|gb|AFW72198.1| global transcription factor group E [Zea mays]
Length = 696
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|306922427|ref|NP_001105214.2| LOC542112 [Zea mays]
Length = 696
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|29569106|gb|AAO84020.1| global transcription factor group E [Zea mays]
Length = 696
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPE-TPKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|395844318|ref|XP_003794909.1| PREDICTED: bromodomain-containing protein 3 isoform 2 [Otolemur
garnettii]
Length = 743
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|441637323|ref|XP_004090057.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 872
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 195 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 254
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 255 NQE---YEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 303
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MD +TIK +++ K Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 1 MDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKL 57
Query: 206 LQL 208
Q+
Sbjct: 58 SQM 60
>gi|395844316|ref|XP_003794908.1| PREDICTED: bromodomain-containing protein 3 isoform 1 [Otolemur
garnettii]
Length = 726
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|291230216|ref|XP_002735064.1| PREDICTED: bromodomain-containing protein 4-like, partial
[Saccoglossus kowalevskii]
Length = 597
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD T+K K++ +D Y N +I ADVR +F N
Sbjct: 169 YAWPFYKPVDANLLGLHDYHDIIKYPMDLGTVKRKLETRD---YTNANDIAADVRAIFTN 225
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE K+ ++
Sbjct: 226 CYKYNPPDHDVVAMARKLQDVFEMKFAKM 254
>gi|33416361|gb|AAH55533.1| Brd3b protein [Danio rerio]
Length = 499
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|395730261|ref|XP_002810633.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Pongo abelii]
Length = 1038
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 16/160 (10%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVDV LGLH+YY++++ PMD TIK KMD ++ Y++ + ADVRL+F N
Sbjct: 362 YAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMDNQE---YKDAYKFAADVRLMFMN 418
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL-------LP------KVMEEEKRQEEEEAKA 226
KYN +V MA+ L + FE + ++ +P + E R+ EA +
Sbjct: 419 CYKYNPPDHEVVTMARMLQDVFETHFSKIPVEPVESMPLCYIKTDITETTGRENTNEASS 478
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQK 266
+ + E + + +L+ +L V QL+ L + +K
Sbjct: 479 EGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVPFRK 518
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 75 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 134
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 135 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 191
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 192 QTLEKLFMQKLSQM 205
>gi|428176256|gb|EKX45141.1| hypothetical protein GUITHDRAFT_108789 [Guillardia theta CCMP2712]
Length = 220
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I +Q++ H +W F PVD E LGL DY+ VI++PMD T+K+ ++ G N ++
Sbjct: 20 ILKQLSAHPNSWVFNEPVDAEKLGLPDYHIVIKRPMDLGTVKSNLE--KGV-LANPQQFK 76
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
DV LVF+NAM YN E DVHVMAK+L FE KW Q +M+ A +
Sbjct: 77 DDVLLVFRNAMTYNPEGHDVHVMAKTLKVLFEGKWSQNEGIIMD-----------AYNNA 125
Query: 231 QLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDL 290
E+ ++ E D L+N+ M+ EEK+ L ++ +L + L
Sbjct: 126 GSASESTKSKAGSE--------DSSLDNV---------PMTYEEKRELSASMNKLPGKRL 168
Query: 291 CKALEIVAENNPSFHATA----QEVDLDMDAQSELTLWRL 326
+ + E N + E+++D+D TL +L
Sbjct: 169 ASVVSFIHEKNSKILMQSGDDPDELEVDIDKLDNATLRQL 208
>gi|20302741|gb|AAM18869.1|AF391288_5 unknown [Branchiostoma floridae]
Length = 664
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGLHDY+E+I+ PMD T+K KMD ++ Y++ +E +D+R++F N
Sbjct: 380 YAWPFYEPVDADLLGLHDYHEIIKHPMDLGTVKKKMDTRE---YKSAQEFASDMRMIFSN 436
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+YN DV MA+ L + FE K+ ++
Sbjct: 437 CYRYNPPEHDVVQMARKLQDVFEMKYAKM 465
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L + DY ++I+ PMD TIK ++
Sbjct: 35 GRMTNQLQYLLKVVMKAVWKHNFAWPFHEPVDWVKLNIPDYPKIIKTPMDLGTIKKRL-- 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
+ Y + +E D L+F N YN +DV++MA++L + F +K Q+ P+ +E
Sbjct: 93 -ETNYYYSAKECIQDFNLMFTNCYVYNKPGEDVYLMAQTLEKLFLQKVAQMPPEEVEVAS 151
Query: 218 RQE 220
+Q+
Sbjct: 152 QQK 154
>gi|413937648|gb|AFW72199.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 728
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 186 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 242
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 243 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 288
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 289 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTE-PETPKMTAEEREAFGNCL 345
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 346 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 400
>gi|148235897|ref|NP_001090595.1| bromodomain containing 3 [Xenopus laevis]
gi|120537384|gb|AAI29055.1| LOC100036838 protein [Xenopus laevis]
Length = 783
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
R+ E + +I +++ K +AWPF PVD E L LHDY+++I+ PMD S++K KMD
Sbjct: 348 RLSEHLKYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKNPMDLSSVKRKMD 407
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 408 GRE---YADAQAFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 456
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDCVKLSLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 87 -ESNYYWSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 145
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 146 PVPKGKGRK 154
>gi|354480438|ref|XP_003502414.1| PREDICTED: bromodomain testis-specific protein-like [Cricetulus
griseus]
Length = 839
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVD + LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 290 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 346
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE + ++
Sbjct: 347 CYKYNPPDHEVVSMARMLQDVFEMHFAKI 375
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 25 GRLTNQLQFLQKVVLKALWKHSFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLEN 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
K Y E D +F N YN DD+ +MA++L E+ +LQ L ++ +EE+
Sbjct: 85 K---YYVKASECIEDFNTMFSNCYLYNKPGDDIVLMAQAL----EKLFLQKLSQMPQEEQ 137
>gi|156914867|gb|AAI52645.1| Brd3b protein [Danio rerio]
gi|163916192|gb|AAI57602.1| LOC100135304 protein [Xenopus (Silurana) tropicalis]
Length = 483
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+E+I++PMD ST+K KMD ++ Y + + AD+RL+F N
Sbjct: 313 YAWPFYKPVDAEALELHDYHEIIKQPMDLSTVKKKMDSRE---YPDAQNFAADIRLMFSN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE K+ ++
Sbjct: 370 CYKYNPPDHEVVAMARKLQDVFEMKFAKM 398
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYTPVDAIKLNLPDYHKVIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWTAGECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|80971731|gb|ABB52829.1| BRD2 [Oncorhynchus mykiss]
Length = 812
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I+ PMD S IK +MD ++ YR+ ++ ADVRL+F N
Sbjct: 369 YAWPFYKPVDASALGLHDYHDIIKCPMDLSNIKRRMDSRE---YRDSQQFSADVRLMFSN 425
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ L + FE ++ ++
Sbjct: 426 CYKYNPPDHDVVGMARKLQDVFEFRFAKM 454
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
A+ + + +H +AWPF PVD L L DY+++I++PMD TIK +++ YR+ E
Sbjct: 59 AMIKSLWRHHFAWPFHEPVDAFRLNLPDYHKIIKQPMDMGTIKKRLENNY---YRSASEC 115
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 116 MQDFNTMFTNCYIYNKPTDDIVLMAQSLEKVFLQKVAQM 154
>gi|116283260|gb|AAH05281.1| BRDT protein [Homo sapiens]
Length = 465
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 19/183 (10%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-------L 209
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++ +
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKIPIEPVESM 384
Query: 210 P------KVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
P + E R+ EA ++ + E + + +L+ +L V QL+ L +
Sbjct: 385 PLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKLQEQLKAVHQQLQVLSQVP 444
Query: 264 IQK 266
+K
Sbjct: 445 FRK 447
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ MD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNSMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|332221880|ref|XP_003260091.1| PREDICTED: bromodomain testis-specific protein isoform 3 [Nomascus
leucogenys]
gi|441637320|ref|XP_004090056.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 899
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 222 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 281
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 282 NQE---YEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 330
>gi|183396808|ref|NP_001116861.1| bromodomain containing 3a [Danio rerio]
Length = 683
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFA----------------------AIFRQITQHK- 119
+E +Q R E+ GR ++ K+ F I +++ K
Sbjct: 252 LEGKQSKVAARRESTGRPIKPPKKDFEDGELGVHGGKKGRLSEQLKYCDVILKEMLSKKH 311
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + ADVRL+F
Sbjct: 312 AAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQTFAADVRLMF 368
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 369 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 399
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD LGL DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y + E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 87 -ESVYYYSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|26332152|dbj|BAC29806.1| unnamed protein product [Mus musculus]
Length = 511
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|219888341|gb|ACL54545.1| unknown [Zea mays]
gi|413937646|gb|AFW72197.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 538
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPET-PKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|431898968|gb|ELK07338.1| Bromodomain-containing protein 3 [Pteropus alecto]
Length = 756
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 337 KLSEHLRHCESILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 396
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 397 SRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 445
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 33/141 (23%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGL---------------------- 135
GR+ +L+ + + + +H++AWPF PVD L L
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPVSARPTPLLQLPGGAAPTLAE 92
Query: 136 --------HDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDER 187
DY+++I+ PMD TIK +++ + Y + E D +F N YN
Sbjct: 93 VLPEMWLVRDYHKIIKNPMDMGTIKKRLEN---SYYWSASECMQDFNTMFTNCYIYNKPT 149
Query: 188 DDVHVMAKSLLEKFEEKWLQL 208
DD+ +MA++L + F +K Q+
Sbjct: 150 DDIVLMAQALEKIFLQKVAQM 170
>gi|26345416|dbj|BAC36359.1| unnamed protein product [Mus musculus]
Length = 505
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|344251852|gb|EGW07956.1| Bromodomain testis-specific protein [Cricetulus griseus]
Length = 565
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVD + LGLH+YY++++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 9 YAWPFYNPVDADALGLHNYYDIVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 65
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE + ++
Sbjct: 66 CYKYNPPDHEVVSMARMLQDVFEMHFAKI 94
>gi|417404059|gb|JAA48805.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 707
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 289 KLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMD 348
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 349 SRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 397
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYN 184
+ + Y + E D +F N YN
Sbjct: 91 -ENSYYWSASECMQDFNTMFTNCYIYN 116
>gi|413937645|gb|AFW72196.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 488
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPET-PKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|417404197|gb|JAA48868.1| Putative transcription initiation factor tfiid subunit bdf1
[Desmodus rotundus]
Length = 725
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILKELLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|332221876|ref|XP_003260089.1| PREDICTED: bromodomain testis-specific protein isoform 1 [Nomascus
leucogenys]
gi|332221878|ref|XP_003260090.1| PREDICTED: bromodomain testis-specific protein isoform 2 [Nomascus
leucogenys]
gi|441637315|ref|XP_004090055.1| PREDICTED: bromodomain testis-specific protein [Nomascus
leucogenys]
Length = 945
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y + + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 328 NQE---YEDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|194225997|ref|XP_001917930.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain-containing protein 3
[Equus caballus]
Length = 728
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|156356469|ref|XP_001623945.1| predicted protein [Nematostella vectensis]
gi|156210690|gb|EDO31845.1| predicted protein [Nematostella vectensis]
Length = 467
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +AWPF PVD E LGLHDY+++I++PMD + IKNK++ + Y + E AD+RL+
Sbjct: 302 HYAYAWPFYKPVDAEALGLHDYHDIIKQPMDMTEIKNKLENR---AYDSPSEFAADIRLM 358
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F N +YN DV MA+ L + FE K+ ++
Sbjct: 359 FSNCYRYNPPDHDVVKMARQLQDVFEMKFAKM 390
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H AWPF PVD L L DY+ +I+KPMD TIK K++
Sbjct: 14 RTTNQLQFLLKTVLKGLWRHHHAWPFREPVDAVKLNLPDYHTIIKKPMDLGTIKKKLENN 73
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y +E D RL+ N YN DD+ +M +S+ + F +K + P
Sbjct: 74 E---YPCAQECIEDFRLMINNCYTYNKPGDDIVLMCQSMDKLFHQKIAMMPP 122
>gi|116283313|gb|AAH04832.1| Brd3 protein [Mus musculus]
Length = 501
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 361 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 417
Query: 212 VME 214
ME
Sbjct: 418 PME 420
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|73967596|ref|XP_858014.1| PREDICTED: bromodomain-containing protein 3 isoform 3 [Canis lupus
familiaris]
Length = 728
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 302 AGKKGKLSEHLRHCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 361
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 362 KKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 415
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
>gi|28839607|gb|AAH47900.1| BRDT protein, partial [Homo sapiens]
Length = 463
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQ 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|62020593|gb|AAH17582.1| BRDT protein, partial [Homo sapiens]
Length = 462
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TIK +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|397609097|gb|EJK60217.1| hypothetical protein THAOC_19472 [Thalassiosira oceanica]
Length = 1735
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 4/124 (3%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
ELK + I + + H+ W F PV+ LGL DY+++I+KPMD TI K++ G+
Sbjct: 856 ELKSKCGEILKSLQNHENGWVFSTPVNPVELGLDDYFDIIKKPMDLGTIGKKLE--QGS- 912
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + E +DVRL F+NAMKYN+E+ VH MAK +KF+E + ++L K +++E + +
Sbjct: 913 YHSFDEFKSDVRLTFENAMKYNEEQTVVHEMAKGFKKKFDEDYKKML-KSLDKEHAENSK 971
Query: 223 EAKA 226
+A A
Sbjct: 972 KAHA 975
>gi|38541875|gb|AAH62700.1| BRDT protein, partial [Homo sapiens]
Length = 464
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF +PVDV LGLH+YY+V++ PMD TIK KMD
Sbjct: 268 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDLGTIKEKMD 327
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ + ADVRL+F N KYN +V MA+ L + FE + ++
Sbjct: 328 NQE---YKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDVFETHFSKI 376
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 75 LKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
L R A I + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 LPSRQTAIIVNPPPPEYINTKKNGRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLK 62
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
L DYY +I+ PMD +TI +++ K Y E D +F N YN DD+ +MA
Sbjct: 63 LPDYYTIIKNPMDLNTIIKRLENK---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 195 KSLLEKFEEKWLQL 208
++L + F +K Q+
Sbjct: 120 QALEKLFMQKLSQM 133
>gi|254566451|ref|XP_002490336.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|238030132|emb|CAY68055.1| Protein involved in transcription initiation at TATA-containing
promoters [Komagataella pastoris GS115]
gi|328350730|emb|CCA37130.1| Bromodomain-containing factor 1 [Komagataella pastoris CBS 7435]
Length = 640
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 32/256 (12%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+++PF+ PVD L Y++++++PMD TI+ K+ + Y N + +VRLVF N
Sbjct: 312 YSFPFLQPVDPVALDCPTYFDIVKEPMDLGTIQAKLANSE---YENADQFEREVRLVFTN 368
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKW-----LQLLPKVMEEEKRQEEEEAKAQLDMQ-LT 233
K+N E V+VM ++ F ++W P+V+ + + E+E ++D LT
Sbjct: 369 CYKFNPEGSPVNVMGHTMENVFNKEWEKKPAPAPSPQVLSDYDSEAEDEGDIEIDESLLT 428
Query: 234 QEAVQT--NKAKELRSELNEVDMQLENLRETV----------------IQKCRKMSTEEK 275
A++ + + +R+++ ++ QL + +V I ++ E K
Sbjct: 429 NPAIEYLETQIERMRADVEKMKRQLYDEVMSVAIKNRKKSKRSKKKSSISYPTHITYEMK 488
Query: 276 KNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESL 334
K L + LS L K + I+ E P + Q E++LD+D TL +L FV +
Sbjct: 489 KELSEKINYLSETKLAKVISIIQETLPELQKSGQEEIELDIDQLDSATLLKLYNFVVKKE 548
Query: 335 KAASRSSGDMGGNNNN 350
KA S D G N N
Sbjct: 549 KAFS----DSGSNTKN 560
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 101 MQELKRQFAA-IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
M + + ++AA + I + K A PF+ PVD E LG+ YY I++PMD STI+ K+
Sbjct: 128 MPKHQNKYAANTIKAIKRLKDAKPFLLPVDTEKLGIPLYYNYIKRPMDLSTIERKI---S 184
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y + I D L+ N K+N E + MAK++ FE+ L + PK
Sbjct: 185 VSAYESPDIIVEDFNLMVDNCRKFNGEDTPITRMAKNIQASFEKHMLNMPPK 236
>gi|344309215|ref|XP_003423272.1| PREDICTED: bromodomain-containing protein 3 [Loxodonta africana]
Length = 727
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 361 KKKMDSRE---YPDAQSFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 414
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 89
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 90 -ENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
>gi|159164649|pdb|2I8N|A Chain A, Solution Structure Of The Second Bromodomain Of Brd4
Length = 114
Score = 92.0 bits (227), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 3/90 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N
Sbjct: 21 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSN 77
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
KYN +V MA+ L + FE ++ ++L
Sbjct: 78 CYKYNPPDHEVVAMARKLQDVFEMRFAKML 107
>gi|449269062|gb|EMC79871.1| Bromodomain-containing protein 3 [Columba livia]
Length = 724
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 328 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 384
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 385 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 413
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNA--MKYNDERDDVHVMAKSLLEKFEEKWLQ-------L 208
+ Y + E D +F N + + DD+ +MA++L + F +K Q L
Sbjct: 87 -EHNYYWSASECMQDFNTMFTNCLYLSFLQPTDDIVLMAQALEKIFLQKVAQMPQEEVEL 145
Query: 209 LPKVMEEEKRQ 219
LP V + + R+
Sbjct: 146 LPPVPKGKGRK 156
>gi|345306075|ref|XP_001505872.2| PREDICTED: bromodomain-containing protein 3 [Ornithorhynchus
anatinus]
Length = 724
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|449478032|ref|XP_002199360.2| PREDICTED: bromodomain-containing protein 3 [Taeniopygia guttata]
Length = 722
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ + + E D V ++ YN DD+ +MA++L + F +K Q LLP
Sbjct: 87 -EHNYFWSSSECMQDFNTVLQSCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 145
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 146 PVPKGKGRK 154
>gi|340381558|ref|XP_003389288.1| PREDICTED: bromodomain-containing protein 2-like [Amphimedon
queenslandica]
Length = 1057
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
AWPF +PVDV+GLGLHDY ++I++PMD +T+K K++ ++ Y + + AD+RL+F N
Sbjct: 475 AWPFYNPVDVKGLGLHDYLDIIKQPMDLTTLKKKLEDRE---YEDPSQFAADMRLIFTNC 531
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MA+ + + FE K+ ++
Sbjct: 532 YKYNPPEHDVVKMARKVQDIFEFKFARM 559
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ R I +H +AWPF PVD L + DY+ +I++PMD + IK ++ D GY + +E
Sbjct: 204 VHRIIWRHHYAWPFHKPVDPVALNIPDYFNIIKRPMDLTLIKKQL---DHNGYSSAKECI 260
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
D + +F N YN DDV M ++L F++K
Sbjct: 261 QDFKTMFNNCYTYNKPTDDVVFMCQALERLFDQK 294
>gi|327288352|ref|XP_003228892.1| PREDICTED: bromodomain-containing protein 3-like [Anolis
carolinensis]
Length = 734
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 334 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 390
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 391 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 419
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 87 -EHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 145
Query: 211 KVMEEEKRQEEEEA 224
V + + R+ A
Sbjct: 146 PVPKGKARKAATTA 159
>gi|126297864|ref|XP_001365890.1| PREDICTED: bromodomain-containing protein 3 [Monodelphis domestica]
Length = 724
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|27804346|gb|AAO22237.1| BRD4-NUT fusion oncoprotein [Homo sapiens]
Length = 1846
Score = 92.0 bits (227), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 7/151 (4%)
Query: 62 PNTSKSISIAKEKLKDRHVASIEKQQQDAF-HREEAAGRRMQELKRQFAAIFRQITQHK- 119
P K+ + + + R V +K D+ H ++ E + + I +++ K
Sbjct: 310 PPEPKTTKLGQRRESSRPVKPPKKDVPDSQQHPAPEKSSKVSEQLKCCSGILKEMFAKKH 369
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVDVE LGLHDY ++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F
Sbjct: 370 AAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMF 426
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 427 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 457
Score = 74.3 bits (181), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 39.3 bits (90), Expect = 3.2, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLKAASRSSGD 343
L+ +V L+ + +
Sbjct: 666 ELERYVTSCLRKKRKPQAE 684
>gi|397567839|gb|EJK45812.1| hypothetical protein THAOC_35556, partial [Thalassiosira oceanica]
Length = 1238
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
RR+ EL+ + + I + + H+ W F PV+ LG+ DY+++I+KPMD TI K+D +
Sbjct: 731 RRLLELRSRCSEILKSLQNHEHGWVFATPVNPVELGIDDYFDIIKKPMDLGTIGEKLDQE 790
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y + + ADV+L F+NAMKYN+E+ VH MAK+L +KF+ + ++L
Sbjct: 791 L---YHSFEDFRADVQLTFENAMKYNEEQTVVHDMAKALKKKFDLDYNKML 838
>gi|116309747|emb|CAH66790.1| H0215F08.1 [Oryza sativa Indica Group]
gi|116309918|emb|CAH66952.1| B0809H07.7 [Oryza sativa Indica Group]
Length = 456
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 120 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 175
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 176 ---YSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLL 232
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ Q ++ V M+ RE R+M+ EEK L
Sbjct: 233 EPPMPVPPPELPPATAPAQ------VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLR 283
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L L E + L+IV + N + E++LD+D T W L FV KA ++
Sbjct: 284 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 343
Query: 340 S 340
S
Sbjct: 344 S 344
>gi|148676421|gb|EDL08368.1| bromodomain containing 3, isoform CRA_c [Mus musculus]
Length = 516
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 306 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 365
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++ +
Sbjct: 366 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKMPDE 422
Query: 212 VME 214
ME
Sbjct: 423 PME 425
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 37 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 94
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 95 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 144
>gi|33416865|gb|AAH55543.1| Brd3a protein [Danio rerio]
Length = 515
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFA----------------------AIFRQITQHK- 119
+E +Q R E+ GR ++ K+ F I +++ K
Sbjct: 251 LEGKQSKVAARRESTGRPIKPPKKDFEDGELGVHGGKKGRLSEQLKYCDVILKEMLSKKH 310
Query: 120 --WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + ADVRL+F
Sbjct: 311 AAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQTFAADVRLMF 367
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N KYN +V MA+ L + FE ++ ++
Sbjct: 368 SNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 398
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD LGL DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAVKLGLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ Y + E D +F N YN DD+ +MA++L + F +K + L+P+
Sbjct: 87 -ESVYYYSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQK-VALMPQ 138
>gi|395506368|ref|XP_003757505.1| PREDICTED: bromodomain-containing protein 3 [Sarcophilus harrisii]
Length = 724
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 136
>gi|118099425|ref|XP_425330.2| PREDICTED: bromodomain-containing protein 3 [Gallus gallus]
Length = 722
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 87 -EHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 145
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 146 PVPKGKGRK 154
>gi|389608049|dbj|BAM17630.1| putative RING3 protein [Oryza sativa Indica Group]
Length = 456
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 120 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 175
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 176 ---YSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKAFMSWFEQELKLL 232
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ Q ++ V M+ RE R+M+ EEK L
Sbjct: 233 EPPMPVPPPELPPATAPAQ------VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLR 283
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L L E + L+IV + N + E++LD+D T W L FV KA ++
Sbjct: 284 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 343
Query: 340 S 340
S
Sbjct: 344 S 344
>gi|357476121|ref|XP_003608346.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509401|gb|AES90543.1| Bromodomain-containing protein [Medicago truncatula]
Length = 518
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 131/311 (42%), Gaps = 50/311 (16%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I +++ + K W F PVD L LHDY+++I+ PMD T+K+K+ Y E
Sbjct: 155 ILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKL---AKNAYSTPAEFA 211
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--------------E 216
DV+L FKNA+ YN + DV+ A LLEKFEE + + K E+ E
Sbjct: 212 DDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEELYRPIQEKFDEKSFDDELQASSWNHVE 271
Query: 217 KRQEEEEAK------------AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVI 264
+E E K A+ L + A +N+ S N + +R
Sbjct: 272 PERERERVKKKDNPIPIPPPVAKRQELLPEPASTSNQP----STSNPPPLAQSPVRTPSP 327
Query: 265 QKCRKMSTEEKKN----LGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSE 320
+ + ++ N LG L PE + + ++I+ + N E++LDM+A
Sbjct: 328 TRALPVKPLKQPNTSWDLGCRF--LPPEKMEQVVQIIRKRNGHLEQDGDEIELDMEAVDT 385
Query: 321 LTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDAL 380
TLW L V K S+ +NNN SNK N P R+K DA
Sbjct: 386 ETLWELDRLVTNWKKMVSKIKRQALMDNNNV---------PSNKGNGELPDREK--VDAT 434
Query: 381 AKPAVKRTKKL 391
K+ KK+
Sbjct: 435 PPSEGKKQKKI 445
>gi|326930474|ref|XP_003211372.1| PREDICTED: bromodomain-containing protein 3-like [Meleagris
gallopavo]
Length = 720
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD ++ Y++ + AD+RL+F N
Sbjct: 326 YAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKKKMDSRE---YQDAQGFAADIRLMFSN 382
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 383 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 411
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 10/129 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ-------LLP 210
+ Y + E D +F N YN DD+ +MA++L + F +K Q LLP
Sbjct: 87 -EHNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEVELLP 145
Query: 211 KVMEEEKRQ 219
V + + R+
Sbjct: 146 PVPKGKGRK 154
>gi|413937644|gb|AFW72195.1| hypothetical protein ZEAMMB73_903470 [Zea mays]
Length = 494
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 27/236 (11%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVD+ L + DY+++++ PMD T+K K+ + Y +
Sbjct: 170 KQCEAILKKLMTQKYSHIFNVPVDIVKLQIPDYFDIVKTPMDLGTVKKKL---ESGSYTS 226
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NAM YN VH MA L + FE +W + EK+
Sbjct: 227 PSDFAADVRLTFNNAMAYNPRGHAVHDMAIQLNKMFESRWRPI-------EKK------- 272
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEV---DMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
L T++ V+ ++A R + V D+ +E R+T + KM+ EE++ G L
Sbjct: 273 --LASAATEKHVEVDRADSKRRKTPPVDRSDVSMECARQTEPET-PKMTAEEREAFGNCL 329
Query: 283 TRLS---PEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+S P + + L+ ++N E+++D+ A S+ L+ LK V + L+
Sbjct: 330 ASISDELPPHIFELLQQCIDSNADLSGDG-EIEIDIHAVSDDLLFELKKHVDKYLQ 384
>gi|261278848|pdb|3JVL|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
gi|261278849|pdb|3JVM|A Chain A, Crystal Structure Of Bromodomain 2 Of Mouse Brd4
Length = 120
Score = 91.7 bits (226), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/116 (41%), Positives = 74/116 (63%), Gaps = 6/116 (5%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
A G ++ E + + I +++ K +AWPF PVDVE LGLHDY ++I+ PMD STIK
Sbjct: 2 AMGSKISEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIK 61
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 62 SKLESRE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 114
>gi|348505480|ref|XP_003440289.1| PREDICTED: bromodomain-containing protein 3-like [Oreochromis
niloticus]
Length = 513
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD ST+K KMD + Y++ + ADVRL+F N
Sbjct: 208 YAWPFYKPVDAEALQLHDYHDIIKYPMDLSTVKKKMDAGE---YQDAQAFAADVRLIFSN 264
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV + A+ L FE+++ ++
Sbjct: 265 CYKYNPAHHDVVIKARKLQGIFEQRFAKM 293
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GRR +L+ + + + +H++AWPF PVD LGL DY+++I PMD TIK +++
Sbjct: 27 GRRTNQLQYMQNIVIKSLWRHQFAWPFYQPVDAVALGLPDYHKIITSPMDMGTIKKRLEN 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E D +F N YN DD+ +MA +L + + +K Q+
Sbjct: 87 ---NYYWSASECLQDFNTMFTNCYIYNKPTDDIVLMALALEKIYLQKVAQM 134
>gi|57282316|emb|CAD43284.1| bromodomain-containing RNA-binding protein 1 [Nicotiana
benthamiana]
Length = 615
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M+ + ++ + ++ +HK W F PVD E LGLHDY+++I++PMD T+K+ +
Sbjct: 189 MENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPMDLGTVKSNL---SN 245
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
Y E ADVRL F NA+ YN + D VH A+ LL +FE+
Sbjct: 246 CFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 414 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 473
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 474 RFVTNWKKMVSKT 486
>gi|57282318|emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana
benthamiana]
Length = 613
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M+ + ++ + ++ +HK W F PVD E LGLHDY ++I++PMD T+K+ +
Sbjct: 189 MENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLGTVKSNL---SN 245
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
Y E ADVRL F NA+ YN + D VHV A+ LL +FE+
Sbjct: 246 NLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFED 288
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 476 RFVTNWKKMVSKT 488
>gi|297814970|ref|XP_002875368.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
gi|297321206|gb|EFH51627.1| hypothetical protein ARALYDRAFT_484508 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 116/246 (47%), Gaps = 39/246 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + +++ H +W F PVDV L + DY +I+ PMD T+K + +G
Sbjct: 176 LMKQCDTLLKKLWSHPHSWVFQAPVDVVKLNIPDYLTIIKHPMDLGTVKKNL----ASGV 231
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPK 211
Y + E ADVRL F NAM YN DVH+M L + FE +W +Q LP
Sbjct: 232 YSSPHEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIEKKLPACSMQTLPA 291
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK-M 270
+ E +E KA + +V K +++ S +RE+V + + M
Sbjct: 292 ITLEPN----DERKAAI-------SVPPAKKRKMASP----------VRESVPEPVKPLM 330
Query: 271 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVF 329
+ EE+ LG L L E ++ + +++ + A+ E+++D+D S+ L L+
Sbjct: 331 TAEERHRLGRQLESLLDELPAHIIDFLKKHSSNGGEIAEDEIEIDIDVLSDEVLVTLRNL 390
Query: 330 VQESLK 335
+ E ++
Sbjct: 391 LDEYIQ 396
>gi|356574042|ref|XP_003555161.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 741
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +++ H++AW F PVDV L L DY+ +I++PMD T+KNK+ + Y E
Sbjct: 184 LLKRLMNHQYAWVFNTPVDVVKLNLPDYFTIIKRPMDLGTVKNKLASGE---YAGPLEFA 240
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DV+L F NAM YN +DVH+MA +L + FE +W
Sbjct: 241 DDVKLTFSNAMDYNPSGNDVHLMADTLNKYFELRW 275
>gi|389608036|dbj|BAM17618.1| putative RING3 protein [Oryza sativa Japonica Group]
Length = 456
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 120 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 175
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 176 ---YSSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKACMSWFEQELKLL 232
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ Q ++ V M+ RE R+M+ EEK L
Sbjct: 233 EPPMPVPPPELPPATAPAQ------VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLR 283
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L L E + L+IV + N + E++LD+D T W L FV KA ++
Sbjct: 284 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 343
Query: 340 S 340
S
Sbjct: 344 S 344
>gi|345311855|ref|XP_001520339.2| PREDICTED: bromodomain testis-specific protein-like, partial
[Ornithorhynchus anatinus]
Length = 431
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDV LGLH+YY+V++ PMD TIK KM+ ++ Y++ E ADVRL+F N
Sbjct: 296 YAWPFYKPVDVTALGLHNYYDVVKNPMDLGTIKKKMNNQN---YKDAHEFAADVRLMFMN 352
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN ++ MA++L + FE ++ ++
Sbjct: 353 CYKYNPPDHEIVGMARTLQDVFEMQFAKI 381
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + I +H ++WPF PVD L L DYY +I+ PMD STIK +++
Sbjct: 24 GRITNQLQYLQKVVIKAIWKHSFSWPFQQPVDAVKLRLPDYYRIIKNPMDLSTIKKRLEY 83
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 84 K---YYVKASECVEDFNTMFTNCYLYNKPGDDIVLMAQALEKVFLQKVAQM 131
>gi|17064912|gb|AAL32610.1| Unknown protein [Arabidopsis thaliana]
gi|20259928|gb|AAM13311.1| unknown protein [Arabidopsis thaliana]
Length = 503
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 39/246 (15%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
L +Q + R++ H +W F PVDV L + DY I+ PMD T+K + +G
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNL----ASGV 231
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-----------LQLLPK 211
Y + E ADVRL F +AM YN DVH+M L + FE +W +Q LP
Sbjct: 232 YSSPHEFAADVRLTFTDAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKLPPCSMQTLPA 291
Query: 212 VMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMS 271
V E +E KA + +V K +++ S +RE+V + + +
Sbjct: 292 VTLEPN----DERKAAI-------SVPPAKKRKMASP----------VRESVPEPVKPLM 330
Query: 272 TE-EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVF 329
TE E+ LG L L E ++ + ++N + A+ E+++D+D S+ L L+
Sbjct: 331 TEVERHRLGRQLESLLDELPAHIIDFLKKHNSNGGEIAEDEIEIDIDVLSDEVLVTLRNL 390
Query: 330 VQESLK 335
+ E ++
Sbjct: 391 LDEYIQ 396
>gi|125549798|gb|EAY95620.1| hypothetical protein OsI_17475 [Oryza sativa Indica Group]
Length = 456
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 120 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 175
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 176 ---YPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLL 232
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ VQ ++ V M+ RE R M+ EEK L
Sbjct: 233 EPPMPVPPPELPPATAPVQ------VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLR 283
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L L E + L+IV + N + E++LD+D T W L FV KA ++
Sbjct: 284 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 343
Query: 340 S 340
S
Sbjct: 344 S 344
>gi|379642603|ref|NP_001243832.1| bromodomain containing 3 [Xenopus (Silurana) tropicalis]
Length = 795
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD S++K KMD ++ Y + + AD+RL+F N
Sbjct: 382 YAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDARE---YADAQAFAADIRLMFSN 438
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 439 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 467
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 87 -ENNYYWSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 136
>gi|356560519|ref|XP_003548539.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 744
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +++ H++AW F PVDV L L DY+ +I++PMD T+K+K+ + Y E
Sbjct: 187 LLKRLMSHQYAWVFKTPVDVVKLNLPDYFTIIKRPMDLGTVKSKLAAGE---YAGPLEFA 243
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPK 211
DV+L F NAM YN +DVH+MA +L + FE +W + LPK
Sbjct: 244 DDVKLTFSNAMNYNPSGNDVHLMADTLNKYFELRWKAIEKKLPK 287
>gi|18394534|ref|NP_564037.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|75151921|sp|Q8H1D7.1|GTE5_ARATH RecName: Full=Transcription factor GTE5, chloroplastic; AltName:
Full=Bromodomain-containing protein GTE5; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E5;
Flags: Precursor
gi|23297757|gb|AAN13019.1| unknown protein [Arabidopsis thaliana]
gi|332191516|gb|AEE29637.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 487
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK AW F PVD +GLGLHDY+ ++++PMD T+K K+ GK + Y++ +
Sbjct: 138 SLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKL-GK--SLYKSPLDF 194
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 195 AEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 328 VFV---QESLKAASRSSG 342
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|444519215|gb|ELV12653.1| Guanine nucleotide exchange factor VAV2 [Tupaia chinensis]
Length = 1580
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG+R + E R +I +++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 255 AGKRGKLSEHLRYCDSILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 314
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 315 KRKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 368
>gi|115460642|ref|NP_001053921.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|38344165|emb|CAE03496.2| OSJNBa0053K19.4 [Oryza sativa Japonica Group]
gi|38345713|emb|CAD41835.2| OSJNBb0085C12.15 [Oryza sativa Japonica Group]
gi|113565492|dbj|BAF15835.1| Os04g0623100 [Oryza sativa Japonica Group]
gi|215695153|dbj|BAG90344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 456
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 17/241 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 120 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 175
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 176 ---YPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLL 232
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ VQ ++ V M+ RE R M+ EEK L
Sbjct: 233 EPPMPVPPPELPPATAPVQ------VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLR 283
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASR 339
L L E + L+IV + N + E++LD+D T W L FV KA ++
Sbjct: 284 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 343
Query: 340 S 340
S
Sbjct: 344 S 344
>gi|292614925|ref|XP_002662470.1| PREDICTED: bromodomain-containing protein 2 [Danio rerio]
Length = 979
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
GRR + E + AI +++ K +AWPF PVD E LGL DY+E+I +PMD STI
Sbjct: 263 VGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTI 322
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KM+ ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 323 KKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR L+ + R + +H ++WPF PVD L L DYY +I+ PMD +T
Sbjct: 21 FKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTT 80
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
I+ ++ + Y E D +F N YN DD+ +MA+ L + F EK ++
Sbjct: 81 IRKRL---ENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEKVAEM 135
>gi|426023907|sp|F1QW93.2|BRDT_DANRE RecName: Full=Bromodomain testis-specific protein
Length = 918
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
GRR + E + AI +++ K +AWPF PVD E LGL DY+E+I +PMD STI
Sbjct: 263 VGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTI 322
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KM+ ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 323 KKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR L+ + R + +H ++WPF PVD L L DYY +I+ PMD +T
Sbjct: 21 FKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTT 80
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
I+ ++ + Y E D +F N YN DD+ +MA+ L + F EK
Sbjct: 81 IRKRL---ENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|9665057|gb|AAF97259.1|AC034106_2 Contains similarity to female sterile homeotic-related protein
Frg-1 from Mus musculus gb|AF045462 and contains a
bromodomain PF|00439 [Arabidopsis thaliana]
Length = 440
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK AW F PVD +GLGLHDY+ ++++PMD T+K K+ GK + Y++ +
Sbjct: 138 SLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKL-GK--SLYKSPLDF 194
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 195 AEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 328 VFV---QESLKAASRSSG 342
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|297791027|ref|XP_002863398.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309233|gb|EFH39657.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 488
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q + R + +H+ W F PVD L + DY+ VI KPMD T+K+K+ Y N
Sbjct: 65 QCLVLLRFLMEHRVGWLFEEPVDPVKLEIPDYFSVIRKPMDLGTVKSKLLK---NVYSNA 121
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
E ADVRL F NAM+YN ++VH +AK + E FE +W +LL K M
Sbjct: 122 DEFAADVRLTFANAMRYNPPGNEVHTIAKEIKEIFEVRW-KLLKKKM 167
>gi|259090114|pdb|2WP1|A Chain A, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
gi|259090115|pdb|2WP1|B Chain B, Structure Of Brdt Bromodomain 2 Bound To An Acetylated
Histone H3 Peptide
Length = 126
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF +PVD + LGLH+YY+V++ PMD TIK KMD ++ Y++ E ADVRL+F N
Sbjct: 34 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIKGKMDNQE---YKDAYEFAADVRLMFMN 90
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN +V MA++L + FE
Sbjct: 91 CYKYNPPDHEVVAMARTLQDVFE 113
>gi|443691011|gb|ELT92995.1| hypothetical protein CAPTEDRAFT_169335 [Capitella teleta]
Length = 1173
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGLHDY+E+I++PMD +I+ K++ ++ Y + E +VRL+F N
Sbjct: 343 YAWPFYKPVDADLLGLHDYHEMIKRPMDLGSIRQKLETRE---YESPAEFAEEVRLIFTN 399
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+YN DV +MAK L + FE ++ ++
Sbjct: 400 CYRYNPPESDVVMMAKKLQDVFEMRYARM 428
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H+++WPF PVD L LHDYY++I+ PMD TIK +++
Sbjct: 41 GRLTNQLQYLQKVVLKALWKHQFSWPFHTPVDAVKLNLHDYYKIIKHPMDMGTIKKRLEN 100
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
+ Y +E D +F N YN +D+ VM +++ ++F K + P+ +E +
Sbjct: 101 QY---YHRAQECIQDWNQMFTNCYTYNKAGEDITVMCQAVEKQFVLKLSGMPPEEVEIQP 157
Query: 218 RQEEEEAK 225
Q+++ K
Sbjct: 158 PQKKQSKK 165
>gi|255554567|ref|XP_002518322.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223542542|gb|EEF44082.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 634
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+L ++ + ++ +HK+ + F PVDVE + LHDY+E+I+KPMD T+K K+ +
Sbjct: 232 QLMKKCGQMLTKLMKHKFGYIFNEPVDVERMNLHDYFEIIKKPMDLGTVKKKLGSNE--- 288
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
Y + + ADVRL F NAMKYN + +V+ A+ L +FEE
Sbjct: 289 YESPIDFAADVRLTFNNAMKYNPKGHEVYTFAEQFLSRFEE 329
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 458 REMSLEEKHKLGVGLQSLPQEKMEQVVQIIRKRNGHLRQDGDEIELDIEAVDTETLWELD 517
Query: 328 VFVQESLKAASR 339
FV K S+
Sbjct: 518 RFVTNYKKMVSK 529
>gi|224121914|ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
gi|222859377|gb|EEE96924.1| global transcription factor group [Populus trichocarpa]
Length = 613
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 11/228 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + ++ H++ W F PVDV + + DY+ +I+ PMD T+K+++ + Y
Sbjct: 94 LMKQCETLLNRLMTHQFGWIFNTPVDVVKMNIPDYFTIIKHPMDLGTVKSRIISGE---Y 150
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEEEKRQE 220
+ ADVRL F NAMKYN +D H MA++L + FE +W + +P + E
Sbjct: 151 SSPLGFAADVRLTFANAMKYNPPGNDFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPS 210
Query: 221 EEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGT 280
+ + +++ E T L+ + ++ ++ I+K M+ EE++ L
Sbjct: 211 RADVRMEMETTAHIEKETTTDTPPLKKK--KITPSDNKVKPGPIRKV--MTNEERQKLSM 266
Query: 281 ALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLK 327
L L E +E + E++ + T + E+++D+DA + L+ L+
Sbjct: 267 ELEALLAELPENIIEFLKEHSGNAGQTGEDEIEIDIDALGDDILFNLR 314
>gi|125560007|gb|EAZ05455.1| hypothetical protein OsI_27669 [Oryza sativa Indica Group]
Length = 791
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
E +Q + + + +H+WA PF+ PVDV L + DY+++I+KPMD TI+ K+ +
Sbjct: 161 EAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKL---NAGM 217
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y + ADVRL F NA+ YN +DV++M K+L FE +W
Sbjct: 218 YSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|358340347|dbj|GAA29956.2| bromodomain-containing protein 3 [Clonorchis sinensis]
Length = 1466
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 130/273 (47%), Gaps = 43/273 (15%)
Query: 106 RQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+Q + I +I+ +++ F+ PVD +GLHDY+ +++KPMD T+K K+D +G
Sbjct: 1119 KQCSNILSEISSYRYKELNHFFIKPVDARSMGLHDYHNIVKKPMDLHTVKVKLD----SG 1174
Query: 163 YRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE----K 217
+ R +A DVRL+F N KYN E DV + K L FE+ +L +P E+ +
Sbjct: 1175 QYHTRSDFAEDVRLIFTNCYKYNGESSDVGKIGKVLSGIFED-FLSKVPADNEDLDQLIQ 1233
Query: 218 RQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLEN-LRETVI------------ 264
+E + + Q + +Q + A EL S LN ++ Q + L + +
Sbjct: 1234 NSIKEHQRLTVQFQQCNDELQRSTA-ELSSILNTLNSQAKRALHHSTVPVPNSTEVSGYP 1292
Query: 265 ---------------QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFH-ATA 308
+ + M+ +EK+ L + +L E L + ++I+ ++ PS
Sbjct: 1293 QSIMCGYEIDEEMPERNVQLMTYDEKRQLSLDINKLPGEKLGQVIQIIQQHEPSHRDCNP 1352
Query: 309 QEVDLDMDAQSELTLWRLKVFVQESLKAASRSS 341
E++LD + TL L+ +V+ L+ A SS
Sbjct: 1353 DEIELDFETLQHTTLRELEQYVKAVLRNAKMSS 1385
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K ++D R A R+ E + + I + I+ ++ F+ PVD E +GLHDY+
Sbjct: 155 IKKPKRDYEERSVAKRLRLSEALKACSNILKDISSQRYRDLNHLFLKPVDAEAMGLHDYH 214
Query: 140 EVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD ST+K K++ TG Y + E D+RL+F N KYN E DV + K L
Sbjct: 215 DVVKKAMDLSTVKTKLE----TGQYHSKYEFADDIRLMFNNCYKYNGEDSDVAKVGKLLQ 270
Query: 199 EKFEEKWLQL 208
FEE + ++
Sbjct: 271 AIFEESFAKV 280
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ + K+ WPF VD E L L DY ++++ PMD TIK +++ K Y + E +
Sbjct: 920 VINRLLKEKYVWPFTRLVDHERLNLPDYPKIVKHPMDLGTIKQRLNLK---FYHSSVECF 976
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
D+ +F+N +N DD+ MA LE+ + L+ +P
Sbjct: 977 DDLFTMFRNCYIFNKPGDDIVGMAVK-LEQLARELLKSMP 1015
>gi|15810439|gb|AAL07107.1| unknown protein [Arabidopsis thaliana]
Length = 487
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
++ ++ +HK AW F PVD +GLGLHDY+ ++++PMD T+K K+ GK + Y++ +
Sbjct: 138 SLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKIKL-GK--SLYKSPLDF 194
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
DVRL F NA+ YN DV+ A+ LL FE+KW+ +
Sbjct: 195 AEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R ++ EEK+ L L L + L ++I+ ++NP E++LD+D+ TLW L
Sbjct: 328 RDLTLEEKRRLSEELQDLPYDKLETVVQIIKKSNPELSQKDDEIELDIDSLDINTLWELY 387
Query: 328 VFV---QESLKAASRSSG 342
FV +ESL + + G
Sbjct: 388 RFVTGYKESLSKKNEAHG 405
>gi|42407711|dbj|BAD08859.1| putative bromodomain-containing protein [Oryza sativa Japonica
Group]
gi|125602058|gb|EAZ41383.1| hypothetical protein OsJ_25901 [Oryza sativa Japonica Group]
Length = 791
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
E +Q + + + +H+WA PF+ PVDV L + DY+++I+KPMD TI+ K+ +
Sbjct: 161 EAFKQCGNLLKNLFKHQWAGPFLAPVDVVQLNIPDYFDIIKKPMDLGTIEKKL---NAGM 217
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y + ADVRL F NA+ YN +DV++M K+L FE +W
Sbjct: 218 YSTPWDFAADVRLTFDNAVTYNPVGNDVNLMGKTLKCIFETRW 260
>gi|125591685|gb|EAZ32035.1| hypothetical protein OsJ_16213 [Oryza sativa Japonica Group]
Length = 337
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 113/251 (45%), Gaps = 19/251 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKD 159
M++ Q A R+ + W F PV+V+ LGLHDY+ VI+ PMD T++ N G+
Sbjct: 1 MRKRCEQILAKLRKDKRSIW---FNAPVEVDRLGLHDYHAVIKCPMDLGTVRANLAAGR- 56
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + + ADVRL F NA++YN +VH A LL FE+ + + +E K
Sbjct: 57 ---YPSHDDFAADVRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASMSWFEQELKLL 113
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
E ++ VQ ++ V M+ RE R M+ EEK L
Sbjct: 114 EPPMPVPPPELPPATAPVQ------VKPRAANVKMRKPKAREP---NKRDMTLEEKNLLR 164
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA-- 337
L L E + L+IV + N + E++LD+D T W L FV KA
Sbjct: 165 VGLESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNNFKKALNK 224
Query: 338 SRSSGDMGGNN 348
SR + + G N
Sbjct: 225 SRRAAIVNGEN 235
>gi|134105292|pdb|2OO1|A Chain A, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105293|pdb|2OO1|B Chain B, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105294|pdb|2OO1|C Chain C, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|134105295|pdb|2OO1|D Chain D, Crystal Structure Of The Bromo Domain 2 Of Human
Bromodomain Containing Protein 3 (Brd3)
gi|340708300|pdb|3S92|A Chain A, Crystal Structure Of The Second Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 113
Score = 89.4 bits (220), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 4 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 63
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 64 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 112
>gi|30694987|ref|NP_199467.2| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|327488241|sp|Q9LS28.2|GTE12_ARATH RecName: Full=Transcription factor GTE12; AltName:
Full=Bromodomain-containing protein GTE12; AltName:
Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP E12
gi|26451383|dbj|BAC42791.1| unknown protein [Arabidopsis thaliana]
gi|332008014|gb|AED95397.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 494
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q A+ R + +H+ W F PVD + + DY+ VI+KPMD T+K+K+ Y N
Sbjct: 72 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNA 128
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
E ADVRL F NAM YN ++VH +AK + E FE +W L+ K
Sbjct: 129 DEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 173
>gi|89267975|emb|CAJ81450.1| bromodomain, testis-specific [Xenopus (Silurana) tropicalis]
Length = 438
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E L LHDY+++I+ PMD S++K KMD ++ Y + + AD+RL+F N
Sbjct: 339 YAWPFYKPVDAEALELHDYHDIIKHPMDLSSVKRKMDARE---YADAQAFAADIRLMFSN 395
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN +V MA+ L + FE ++ ++
Sbjct: 396 CYKYNPPDHEVVAMARKLQDVFEMRFAKM 424
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
+ + +H++AWPF PVD L L DY+++I+ PMD TIK ++ + Y + E D
Sbjct: 1 KTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRL---ENNYYWSANECMQD 57
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+F N YN DD+ +MA++L + F +K Q+
Sbjct: 58 FNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 93
>gi|348536160|ref|XP_003455565.1| PREDICTED: bromodomain-containing protein 3 [Oreochromis niloticus]
Length = 678
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Query: 110 AIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
AI +++ K +AWPF PVD E L LHDY+++I+ PMD STI+ KMD + Y +
Sbjct: 313 AILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE---YSDP 369
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ DVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 370 QSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 411
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L LHDY++VI+ PMD TIK ++
Sbjct: 30 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLHDYHKVIKNPMDMGTIKKRL-- 87
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 -ENNYYWSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|8885596|dbj|BAA97526.1| unnamed protein product [Arabidopsis thaliana]
Length = 506
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q A+ R + +H+ W F PVD + + DY+ VI+KPMD T+K+K+ Y N
Sbjct: 84 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLK---NVYSNA 140
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
E ADVRL F NAM YN ++VH +AK + E FE +W L+ K
Sbjct: 141 DEFAADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKK 185
>gi|159164343|pdb|2E7N|A Chain A, Solution Structure Of The Second Bromodomain From Human
Bromodomain-Containing Protein 3
Length = 117
Score = 88.6 bits (218), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+K KMD
Sbjct: 9 KLSEHLRYCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTVKRKMD 68
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
G++ Y + + ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 69 GRE---YPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 117
>gi|63100516|gb|AAH95028.1| Wu:fi25h02 protein, partial [Danio rerio]
Length = 600
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 8/117 (6%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
GRR + E + AI +++ K +AWPF PVD E LGL DY+E+I +PMD STI
Sbjct: 263 VGRRTKLSERLKYCNAILKEMFSKKHSAYAWPFYKPVDAETLGLLDYHEIIHQPMDMSTI 322
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K KM+ ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 323 KKKMEARE---YTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKLQDVFEFRFSKI 376
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
F + GR L+ + R + +H ++WPF PVD L L DYY +I+ PMD +T
Sbjct: 21 FKNPKKPGRLTNHLQYIEKVVIRALWKHHFSWPFRQPVDAVRLNLPDYYTIIKNPMDLTT 80
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
I+ ++ + Y E D +F N YN DD+ +MA+ L + F EK
Sbjct: 81 IRKRL---ENNYYWKAMECVEDFNTMFTNCYVYNRPGDDIVLMAQVLEKLFLEK 131
>gi|47212213|emb|CAF94980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 6/114 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
G ++ E + AI +++ K +AWPF PVD E L LHDY+++I+ PMD STI+ K
Sbjct: 280 GPQLGEQMKHCDAILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKK 339
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
MD + Y + DVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 340 MDKGE---YSEPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 390
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 14 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRL-- 71
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 72 -ENNYYWSASGAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 121
>gi|357461403|ref|XP_003600983.1| Global transcription factor group [Medicago truncatula]
gi|355490031|gb|AES71234.1| Global transcription factor group [Medicago truncatula]
Length = 59
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/59 (67%), Positives = 49/59 (83%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
M+F TIK KM+ KDG Y+N+REIY DVRL+FKNAMKYN+E + VHVMAK+ L+KFE K
Sbjct: 1 MEFITIKRKMEAKDGYVYKNIREIYVDVRLIFKNAMKYNNEINYVHVMAKTSLQKFENK 59
>gi|301112310|ref|XP_002905234.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
gi|262095564|gb|EEY53616.1| histone acetyltransferase, putative [Phytophthora infestans T30-4]
Length = 2294
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
LK++ R + +HK+ W F PVD L + +Y++++ KPMD T+K K++ G
Sbjct: 1295 LKKKLEGTLRGMMEHKFGWVFNTPVDPVALNIPNYFKIVRKPMDLGTVKKKLE----LGI 1350
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y++ E DVR F+NAM+YN E DV+ +AK +L F + +++ ++ +E E+
Sbjct: 1351 YKHTEEFAYDVRTTFQNAMQYNSEDQDVYSLAKDMLADFNSEMRKVVAEIDVDETAAREK 1410
Query: 223 EAKAQL 228
E+ +L
Sbjct: 1411 ESSCRL 1416
>gi|57282320|emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
Length = 617
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M+ + ++ + ++ +HK W F PVD + +GLHDY+++I++PMD T+K+ +
Sbjct: 190 MENMMKECRQVLAKLMKHKSGWIFNTPVDAKAMGLHDYHQIIKRPMDLGTVKSNL---IN 246
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
Y E ADVRL F NA+ YN + D VH A+ LL +FE+
Sbjct: 247 NFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 289
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 417 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 476
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 477 RFVTNWKKMVSKT 489
>gi|356513665|ref|XP_003525531.1| PREDICTED: transcription factor GTE8-like [Glycine max]
Length = 739
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L +Q + +++ H++ F PVD+ + DY+ +I+ PMD T+K+K+ + Y
Sbjct: 170 LMKQCETLLKRVMSHQFGKVFDKPVDIVKWNIPDYFTIIKHPMDLGTVKSKLISCE---Y 226
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
++ + ADVRL F NAM YN +DVHVMA++L + FE +W + + K++ + E
Sbjct: 227 TSLMDFAADVRLTFSNAMSYNPPGNDVHVMAETLSKYFETRW-KPIEKILAIDDVPSEPS 285
Query: 224 AKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALT 283
+ + + K+ + N +++ E ++ R M+ EEK+ L L
Sbjct: 286 KPTTC---IEKSEIVDPPVKKKKITPNGTNVKPEPIK-------RIMTGEEKQKLSMELD 335
Query: 284 RLSPEDLCKALEIVAENNPSFHATA---QEVDLDMDAQSELTLWRLK 327
E ++ + E S++A+ E+++D+DA S+ TL++L+
Sbjct: 336 ASVVELPENIIDFLKEQ--SYNASQINDDEIEIDIDALSDDTLFKLR 380
>gi|195148234|ref|XP_002015079.1| GL19519 [Drosophila persimilis]
gi|194107032|gb|EDW29075.1| GL19519 [Drosophila persimilis]
Length = 486
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGL+DYY +I+ PMD T+K K+D + Y++ AD+RL+F N
Sbjct: 134 YAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNR---VYKSASAFAADMRLIFSN 190
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN D+ +M + L FE ++++
Sbjct: 191 CYKYNPVHHDIVIMCEKLQLAFEMLYVKV 219
>gi|297740594|emb|CBI30776.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q +I +++ H W F PVD L + DY+ +I KPMD TIK+K+ + Y
Sbjct: 58 QCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKL---EKNMYLAT 114
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAM YN ++VH MAK L + F +W
Sbjct: 115 EEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 153
>gi|147826573|emb|CAN72911.1| hypothetical protein VITISV_007433 [Vitis vinifera]
Length = 588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q +I + + H W F PVD L + DY+ +I KPMD TIK+K++ Y
Sbjct: 73 QCTSILKXLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKLEKNX---YLAT 129
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAM YN ++VH MAK L + F +W
Sbjct: 130 EEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 168
>gi|198474627|ref|XP_002132733.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
gi|198138474|gb|EDY70135.1| GA25991 [Drosophila pseudoobscura pseudoobscura]
Length = 485
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD + LGL+DYY +I+ PMD T+K K+D + Y++ AD+RL+F N
Sbjct: 134 YAWPFYEPVDAQNLGLYDYYNIIKTPMDLGTVKQKLDNR---VYKSASAFAADMRLIFSN 190
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN D+ +M + L FE ++++
Sbjct: 191 CYKYNPVHHDIVIMCEKLQLAFEMLYVKV 219
>gi|359483574|ref|XP_002269681.2| PREDICTED: transcription factor GTE9-like [Vitis vinifera]
Length = 588
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q +I +++ H W F PVD L + DY+ +I KPMD TIK+K+ + Y
Sbjct: 73 QCTSILKKLMTHPAGWVFNQPVDPVALNIPDYFSIISKPMDLGTIKSKL---EKNMYLAT 129
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAM YN ++VH MAK L + F +W
Sbjct: 130 EEFAADVRLTFANAMLYNPPSNNVHQMAKKLNDLFNTRW 168
>gi|145347283|ref|XP_001418103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578331|gb|ABO96396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 859
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 74 KLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
KL+D + ++ Q++ + E+A R +E+ R+ + +HK+ F+ PVD +
Sbjct: 242 KLRDGRAVTTQRLQKE-YEVEQARDARRKEMIRRCREVLIASKKHKYHKIFLVPVDPKKH 300
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
G+ DY+++I+ PMD T+K K+D K Y N E AD+RL+F N + YN D VM
Sbjct: 301 GVPDYFDIIKNPMDMGTVKTKLDTK---AYLNPAEFCADMRLIFSNGLLYNGTASDAGVM 357
Query: 194 AKSLLEKFEEKWL 206
+++ + FE WL
Sbjct: 358 TETVRQLFETAWL 370
>gi|19171509|emb|CAC84085.1| hypothetical protein [Takifugu rubripes]
Length = 701
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 6/102 (5%)
Query: 110 AIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
AI +++ K +AWPF PVD E L LHDY+++I+ PMD STI+ KMD + Y
Sbjct: 302 AILKEMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTIRKKMDKGE---YNEP 358
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ DVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 359 QSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 400
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 30 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLADYHKVIKNPMDMGTIKKRL-- 87
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 -ENNYYWSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
>gi|350539095|ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding protein Virp1a [Solanum lycopersicum]
gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding protein Virp1b [Solanum lycopersicum]
gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding protein Virp1c [Solanum lycopersicum]
gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186134|emb|CAC33449.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
gi|13186138|emb|CAC33451.1| PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
Length = 602
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HK W F PVD E LGLHDY+++I++PMD T+K+ + Y + E
Sbjct: 199 ILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPMDLGTVKSNL---AKNFYPSPFEFA 255
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
ADVRL F NA+ YN + D V+ A+ LL +FE+ + L
Sbjct: 256 ADVRLTFNNALLYNPKTDQVNAFAEQLLGRFEDMFRPL 293
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+M+ EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 407 REMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 467 RFVTNWKKMVSKT 479
>gi|224061031|ref|XP_002300324.1| global transcription factor group [Populus trichocarpa]
gi|222847582|gb|EEE85129.1| global transcription factor group [Populus trichocarpa]
Length = 564
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+ + +Q +++ + + H W F PVD L + DY+ VI PMD T+K+K+ GK+
Sbjct: 79 RSVTQQCSSLLKSLMAHPAGWVFNKPVDPVALKIPDYFTVISNPMDLGTVKSKL-GKN-- 135
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y ++ E AD+RL F NAM YN ++VH MA+ L FE W L
Sbjct: 136 FYASINEFAADIRLTFSNAMLYNPPSNNVHRMAEELNGIFETGWKAL 182
>gi|67523055|ref|XP_659588.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|40744729|gb|EAA63885.1| hypothetical protein AN1984.2 [Aspergillus nidulans FGSC A4]
gi|259487345|tpe|CBF85947.1| TPA: protein involved in transcription initiation at
TATA-containing promoters (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 808
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 131/295 (44%), Gaps = 49/295 (16%)
Query: 82 SIEKQQQDAFHREEAAGRRMQ-ELK--RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
SI ++D + + ++ Q ELK R+ + + +A+PF +PVD L + Y
Sbjct: 434 SIHPPKRDLPYSTKPKKKKFQWELKFCREVLDELHKTKHYSYAFPFYYPVDPVALNIPTY 493
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSL 197
+ +I+KPMD ST+ +K++ TG Y N +E D+R + KN K+N + D +++ + L
Sbjct: 494 HSIIKKPMDLSTVSSKLN----TGQYENAKEFEMDIRQIMKNCFKFNLKGDPIYMAGEKL 549
Query: 198 LEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKE----LRSELNEVD 253
E F KW Q + E E+ A + + E ++ E L+ ++ ++
Sbjct: 550 EEVFNAKWAQKESYLAAHEPPPEQHSAASSSEESDEDEEGSDDEEDEAINRLKQQIADMS 609
Query: 254 MQLENLRETVI------------------------------------QKCRKMSTEEKKN 277
QLE + + +K R +S +K+
Sbjct: 610 QQLEAMTQKKKKTPPKKAKSKKKDSKKVGATGAGRKDKKGGGKSSKPEKPRYVSYHDKQI 669
Query: 278 LGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQ 331
+ ++ L + + +AL+I+ N P+ T + E++LD+D LW L FV+
Sbjct: 670 ISNGISSLPDKKMQEALKIIQSNVPALKGTQETEIELDIDELPNDVLWMLLKFVK 724
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+ +Q LKR A F + PVD + + Y++VI++PMD TI+ K+
Sbjct: 268 KAIQSLKRLHDARF-----------YKEPVDPVKMAIPTYFDVIKEPMDLGTIEQKL--- 313
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y + + ++ D L+ +NA +N V V K L FE++ L LPK E E
Sbjct: 314 KNNVYTSPQSVFNDFELMVRNAHVFNGPDHIVSVEGKRLQATFEKQMLN-LPKADEVE 370
>gi|66826485|ref|XP_646597.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74858341|sp|Q55C84.1|Y0170_DICDI RecName: Full=Bromodomain-containing protein DDB_G0270170
gi|60474498|gb|EAL72435.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 1578
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 72 KEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQ----------FAAIFR-------Q 114
K K K RH A + Q + + R Q R +F+ +
Sbjct: 691 KPKKKPRHSAPLIPQIKPRLPLNGGSSERAQRSSRGRMGKAMRDVVLTPVFKRCLDLLEE 750
Query: 115 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 174
+ +H+ + PF+ VD LG+ DY++VI+ PMD TIK + G GY + + D R
Sbjct: 751 LFEHQHSPPFLVAVDPYALGILDYFDVIKHPMDLGTIKASLIGG---GYDTIDKFAEDCR 807
Query: 175 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-------PKVMEEEK 217
LVF NA YN + VH+MA+SL + FE+ + ++L PK +++EK
Sbjct: 808 LVFSNAKTYNPSTNPVHIMAQSLEDVFEKGFPKVLIEPPSPPPKNVDQEK 857
>gi|159475920|ref|XP_001696062.1| Ring3 protein [Chlamydomonas reinhardtii]
gi|158275233|gb|EDP01011.1| Ring3 protein [Chlamydomonas reinhardtii]
Length = 798
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 22/236 (9%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+++Q++ R + + + K A F PVD G+ DY + I PMD TIK K+ +
Sbjct: 89 KKIQDIWRLCGSTVDYLLKKKNAQVFGRPVDPVRDGVPDYLKFILHPMDLGTIKAKLRER 148
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
Y + RE AD+RLV+ N YN V L + FE KW + ++
Sbjct: 149 ---RYNDPREFAADMRLVWSNCRTYNQIGTSVRQWGDQLSDDFERKWADYNCEQRWDDLM 205
Query: 219 QEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNL 278
+ LD ++ + A++L +N V + E R M++ EK+ L
Sbjct: 206 ATRDPQNVSLDRRI------ASSARQLLQRVNSVQLMQE------ADPTRAMTSVEKRKL 253
Query: 279 GTALTRLSPEDLCKALEIVAEN----NPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
AL+ L + L L I+AEN NP +E++LD+D TLWRL+ +
Sbjct: 254 SIALSELQGDQLADVLNIIAENLKDVNPDDD---EEIELDVDQLDNTTLWRLREYC 306
>gi|226493721|ref|NP_001146156.1| uncharacterized protein LOC100279725 [Zea mays]
gi|219885991|gb|ACL53370.1| unknown [Zea mays]
gi|413921106|gb|AFW61038.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 484
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++ ++++ A I ++ + K + F PVDVEGL LHDY +I PMD T+K +
Sbjct: 135 VEAMRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT---- 190
Query: 161 TGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
G E +A DVRL F NA++YN VH A +LL FE + + + E++RQ
Sbjct: 191 AGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAV--SWFEQQRQ 248
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
+ E Q V + + RE R+M EEK+ L
Sbjct: 249 QLEPPMQPDLPPPPQLPVVSVPVQAPPRMGGGGRRPKPKAREP---NKREMDEEEKQKLR 305
Query: 280 TALTRLSPEDLCKALEIVAENN--PSFHATAQEVDLDMDAQSELTLWRLKVFV---QESL 334
+ L E + L+IV + N P+F T + V+LD D TLW L FV +++L
Sbjct: 306 VEIENLPEEKMLNVLQIVQKRNSDPAF--TGEVVELDFDELDMETLWELDRFVVNWRKAL 363
Query: 335 KAASRSS---GDMGGNNNNN 351
K + R+S GD N +
Sbjct: 364 KKSQRNSMVNGDAAAAVNGD 383
>gi|326502374|dbj|BAJ95250.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q AI +++ K++ F PVDVE L + DY E+I+ PMD TIK K+ D Y +
Sbjct: 159 KQCEAILKKLMTQKFSHIFNVPVDVEKLNIPDYNEIIKHPMDLGTIKKKL---DSGSYTS 215
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F NA+ YN VH MA L + FE +W K E++ A
Sbjct: 216 PSDFAADVRLTFNNAITYNPRGHAVHDMAIQLNKMFESRW-----------KTVEKKLAS 264
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
A + + + + + K ++ D+ ++ +R T I K KM+ EEK++ G
Sbjct: 265 AAIKPHVEVDRADSKRRKT--PPVDHSDLSIDCVRPTEIVKP-KMTFEEKESFG 315
>gi|57282322|emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
Length = 616
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +HK W F PVD E LGLHDY+++I++P D T K+ + Y E
Sbjct: 199 VLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLGTXKSNL---SNNFYPTPFEFA 255
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
ADVRL F NA+ YN + D VH A+ LL +FE+
Sbjct: 256 ADVRLTFNNALLYNPKTDQVHGFAEQLLARFED 288
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R+MS EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 416 REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 476 RFVTNWKKMVSKT 488
>gi|296421346|ref|XP_002840226.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636440|emb|CAZ84417.1| unnamed protein product [Tuber melanosporum]
Length = 825
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 49/259 (18%)
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
H A+PF PVD L + DY+++I+KPMD STI K+ Y + + AD+RL+F
Sbjct: 477 HDTAFPFYVPVDPVALNIPDYFKIIKKPMDLSTISTKLKTNQ---YDSASDFEADIRLMF 533
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKW----------------LQLLPKVMEEEKRQEE 221
N K+N VH K+L F++KW + + P V +E++
Sbjct: 534 SNCYKFNPSDQHVHKCGKALENIFDQKWAEKASYTRDNPGSHSPVSVSPPVEDEDEDMSG 593
Query: 222 EEAKAQ------LDMQL------------------TQEAVQTNKAKELRSELNEVDMQLE 257
+E++ Q L+ QL T A T ++K S +
Sbjct: 594 DESEDQEQNIRLLEQQLEAMKDQISAMKNGQKKKKTPPATSTKRSKGGSSRKGSLVSTAP 653
Query: 258 NLRETVIQKCRK-----MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA-QEV 311
+ +K ++ ++ E+K L + L + AL+++ EN P TA E+
Sbjct: 654 PANPSRPKKGKEKKVPYITMEQKTELSERINFLPTGKMAYALKMIRENMPDLGNTADDEI 713
Query: 312 DLDMDAQSELTLWRLKVFV 330
+LD+D TL++L +V
Sbjct: 714 ELDIDELDPQTLYKLHTYV 732
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ R + + K A PF PVD L + +Y+EVI PMD T++ K++ K+ Y + R+
Sbjct: 252 VIRSLRRTKDARPFTMPVDPIKLNVPNYFEVITNPMDLQTMEKKLNNKE---YSSSRDFL 308
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
AD L+ N + +N V + + FE
Sbjct: 309 ADFNLILTNCVTFNGREHPVSENGRVMKAVFE 340
>gi|125591682|gb|EAZ32032.1| hypothetical protein OsJ_16210 [Oryza sativa Japonica Group]
Length = 515
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRN 165
Q A R+ + W F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y +
Sbjct: 7 QILAKLRKDKRSIW---FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPS 59
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ AD+RL F NA++YN +VH A LL FE+ + + +E K E
Sbjct: 60 HDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPV 119
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
++ + Q ++ V M+ RE R+M+ EEK L L L
Sbjct: 120 PPPELPPAKAPAQ------VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESL 170
Query: 286 SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA--SRSSGD 343
E + L+IV + N + E++LD+D T W L FV + KA SR +
Sbjct: 171 PEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAI 230
Query: 344 MGGNN 348
+ G N
Sbjct: 231 VNGEN 235
>gi|224116480|ref|XP_002317311.1| global transcription factor group [Populus trichocarpa]
gi|222860376|gb|EEE97923.1| global transcription factor group [Populus trichocarpa]
Length = 567
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 67/126 (53%), Gaps = 10/126 (7%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVI 142
IE +QQ + A + +Q +A+ + + H W F PVD L + DY+ +I
Sbjct: 72 IECKQQKRLKMDRA-------VTQQCSALLKSLMVHPAGWVFNKPVDPVALNIPDYFSII 124
Query: 143 EKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
PMD T+K+K+ GK+ Y +++E D+RL F NAM YN ++VH MA+ L FE
Sbjct: 125 SIPMDLGTVKSKL-GKN--CYASIKEFADDIRLTFSNAMLYNPPTNNVHKMAEELNGIFE 181
Query: 203 EKWLQL 208
W L
Sbjct: 182 TSWKAL 187
>gi|357130613|ref|XP_003566942.1| PREDICTED: transcription factor GTE4-like [Brachypodium distachyon]
Length = 215
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ Q+ QH AW F PVDV LG+ DYY +I PMD T+ +++ + Y + R
Sbjct: 40 LLDQLLQHDDAWVFDKPVDVYELGISDYYTMIPDPMDLGTVSSRL---NRLRYADPRAFA 96
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW----LQLLPKVMEEEKRQEEEEAKA 226
DVRL F+NAM +NDE D V+ A L FE W ++L P +E K+ +EE +
Sbjct: 97 EDVRLTFRNAMTFNDEDDAVYKSAAELSRIFESGWASILVELTPPQLERNKKLKEEMTRL 156
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLE 257
Q A+ KE+ L EV+ E
Sbjct: 157 PASWQGKAVAIM----KEIGGCLQEVNRWTE 183
>gi|116309916|emb|CAH66950.1| B0809H07.5 [Oryza sativa Indica Group]
Length = 337
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTG 162
++++ I ++ + K + F PV+V+ LGL DY+ VI+ PMD T++ N G+
Sbjct: 1 MRKRCDQILVKLRKDKRSIWFNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR---- 56
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + + AD+RL F NA++YN +VH A LL FE+ + + +E K E
Sbjct: 57 YPSHDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPP 116
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
++ + Q ++ V M+ RE R+M+ EEK L L
Sbjct: 117 MPVPPPELPPAKAPAQ------VKPRAGNVKMRKPKAREP---NKREMTLEEKNLLRVGL 167
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA--SRS 340
L E + L+IV + N + E++LD+D T W+L FV + KA SR
Sbjct: 168 ESLPEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWKLDRFVNKFKKALNKSRR 227
Query: 341 SGDMGGNN 348
+ + G N
Sbjct: 228 AAIVNGEN 235
>gi|10441758|gb|AAG17179.1|AF191032_1 RING3, partial [Myxine glutinosa]
Length = 732
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 6/113 (5%)
Query: 99 RRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
R+M + R I ++I K +AWPF VD LGLHDY+++I+ PMD +TIK K
Sbjct: 404 RQMSDQLRHCQTILKEIFTKKHAAYAWPFYKAVDAFALGLHDYHDIIKIPMDLTTIKEKF 463
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ ++ Y N+ E D+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 464 ERRE---YTNLHEFADDMRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKV 513
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF HPVD L L DYY++I+ P+D TIK ++
Sbjct: 29 GRLTNQLQFLQKVVMKVLWKHQFAWPFHHPVDAAKLNLPDYYQIIKNPLDMLTIKKRL-- 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA+++ + F +K
Sbjct: 87 -ESNYYWTAVECIQDFSTMFTNCYIYNRPNDDIVLMAQTVEKAFLQK 132
>gi|238481625|ref|NP_001154792.1| nuclear protein X1 [Arabidopsis thaliana]
gi|238481627|ref|NP_001154793.1| nuclear protein X1 [Arabidopsis thaliana]
gi|10177441|dbj|BAB10737.1| unnamed protein product [Arabidopsis thaliana]
gi|50253452|gb|AAT71928.1| At5g63330 [Arabidopsis thaliana]
gi|60543335|gb|AAX22265.1| At5g63330 [Arabidopsis thaliana]
gi|332010350|gb|AED97733.1| nuclear protein X1 [Arabidopsis thaliana]
gi|332010351|gb|AED97734.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 477
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 114/232 (49%), Gaps = 14/232 (6%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ ++ HK WPF PVD L + DY+ VI+ PMD TI++++ + Y + +
Sbjct: 167 TLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---YSSPLDF 223
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 229
ADVRL F N++ YN + H MA+ + + FE W + K+ + + A L+
Sbjct: 224 AADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSASLE 283
Query: 230 MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPED 289
++ E K + + +N+ +++E + M+ EKK LG L L +
Sbjct: 284 SEIPFEVAPMRKKE---AAMNDNKLRVEPAKLV-------MTDGEKKKLGQDLMALEEDF 333
Query: 290 LCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLKAASRS 340
K +++ E + S + + E+++D++A S+ L+ ++ + + L+ +S
Sbjct: 334 PQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>gi|290985307|ref|XP_002675367.1| bromodomain-containing protein [Naegleria gruberi]
gi|284088963|gb|EFC42623.1| bromodomain-containing protein [Naegleria gruberi]
Length = 718
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 131/274 (47%), Gaps = 44/274 (16%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+ ++++ + + +HKW+WPF +PVD L + DY++VI+ PMD T++ K++ +
Sbjct: 181 ESIQKKLQKLMGIVKKHKWSWPFNNPVDPVQLQIPDYFDVIKNPMDLGTVEKKVNNNE-- 238
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV---MEEEKR 218
Y +V + DVR+++ N YN D++ MAK + + F EK+++ + +V +
Sbjct: 239 -YMDVYQFLDDVRVIWSNCYLYNPVDSDIYKMAKEVEKYFNEKYVKTVGEVSYDTTTTVQ 297
Query: 219 QEEEEAKAQLDMQLTQEAV-----------QTNKAKELRSELNEVDMQLENLRETVIQK- 266
+E AQ T + T+ K + + +E + L+ + ET I++
Sbjct: 298 EEVTSPSAQSSTITTPASTPSTSKNKKSNGTTSSTKGRKKKTSETETNLDLMIETPIKEQ 357
Query: 267 -------------------------CRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENN 301
+ MS +KK L T + L + L + + I+
Sbjct: 358 VTTPSTTSKSKASSTKKTTTNKKTKPKTMSYNQKKELSTNIGSLEGDKLAEVVRIIQSKA 417
Query: 302 PSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESL 334
PS + ++ E+++D+D + TL+ L+ FV+++L
Sbjct: 418 PSASSKSETEIEIDLDKLDDATLFELEAFVEKNL 451
>gi|38344163|emb|CAE03494.2| OSJNBa0053K19.2 [Oryza sativa Japonica Group]
gi|38345711|emb|CAD41833.2| OSJNBb0085C12.13 [Oryza sativa Japonica Group]
Length = 299
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRN 165
Q A R+ + W F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y +
Sbjct: 7 QILAKLRKDKRSIW---FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPS 59
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ AD+RL F NA++YN +VH A LL FE+ + + +E K E
Sbjct: 60 HDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPV 119
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
++ + Q ++ V M+ RE R+M+ EEK L L L
Sbjct: 120 PPPELPPAKAPAQ------VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESL 170
Query: 286 SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA--SRSSGD 343
E + L+IV + N + E++LD+D T W L FV + KA SR +
Sbjct: 171 PEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAI 230
Query: 344 MGGNN 348
+ G N
Sbjct: 231 VNGEN 235
>gi|308489328|ref|XP_003106857.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
gi|308252745|gb|EFO96697.1| hypothetical protein CRE_17238 [Caenorhabditis remanei]
Length = 392
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
F + T + + +PF PVD LGL DY+EVI+KPMD ST+K K+ G++ Y N +
Sbjct: 129 FEKTTHNAYTFPFRKPVDTVLLGLVDYHEVIKKPMDMSTMKKKLIGEE---YENAEDFKK 185
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
D +L+ +N + YN+E D V +A E F KW + P
Sbjct: 186 DFKLMIQNCLTYNNEGDPVSDLAIQFREAFAAKWKKEFP 224
>gi|413921105|gb|AFW61037.1| hypothetical protein ZEAMMB73_947765 [Zea mays]
Length = 429
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 120/260 (46%), Gaps = 20/260 (7%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++ ++++ A I ++ + K + F PVDVEGL LHDY +I PMD T+K +
Sbjct: 135 VEAMRKRCADILMRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLT---- 190
Query: 161 TGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
G E +A DVRL F NA++YN VH A +LL FE + + + E++RQ
Sbjct: 191 AGRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGNLLASFEGMYKEAV--SWFEQQRQ 248
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
+ E Q V + + RE R+M EEK+ L
Sbjct: 249 QLEPPMQPDLPPPPQLPVVSVPVQAPPRMGGGGRRPKPKAREP---NKREMDEEEKQKLR 305
Query: 280 TALTRLSPEDLCKALEIVAENN--PSFHATAQEVDLDMDAQSELTLWRLKVFV---QESL 334
+ L E + L+IV + N P+F T + V+LD D TLW L FV +++L
Sbjct: 306 VEIENLPEEKMLNVLQIVQKRNSDPAF--TGEVVELDFDELDMETLWELDRFVVNWRKAL 363
Query: 335 KAASRSS---GDMGGNNNNN 351
K + R+S GD N +
Sbjct: 364 KKSQRNSMVNGDAAAAVNGD 383
>gi|255557483|ref|XP_002519772.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223541189|gb|EEF42745.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 570
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 72 KEKLKDRHVASIEKQQQDAFHREEAAGRRM-QELKRQFAAIFRQITQHKWAWPFMHPVDV 130
K+KL + ++I++ D ++ R+M + + Q ++ + + H W F PVD
Sbjct: 51 KQKLTE--CSAIKRGPSDMVEGQQQKKRKMDRGVIHQCTSLVKSLMNHPCGWVFKEPVDP 108
Query: 131 EGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDV 190
E L + DY+ VI PMD T+K+K++ Y E ADVRL F NA+ YN + V
Sbjct: 109 EKLEIPDYFSVITNPMDLGTVKSKLENNQ---YFGAEEFAADVRLTFSNALLYNPPLNYV 165
Query: 191 HVMAKSLLEKFEEKWLQL 208
H MA+ L + FE +W L
Sbjct: 166 HKMAEKLKKIFETRWKAL 183
>gi|348686369|gb|EGZ26184.1| hypothetical protein PHYSODRAFT_483048 [Phytophthora sojae]
Length = 2258
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 71/125 (56%), Gaps = 3/125 (2%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
LK++ I + + HK+ W F PVD L + +Y+++I KPMD T+K K++ Y
Sbjct: 1268 LKKKLEVILKGMMDHKFGWVFNTPVDPVALNIPNYFKIIRKPMDLGTVKKKLEAGI---Y 1324
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEE 223
++ E +VR F+NAM+YN E DV+ +AK +L F + ++ ++ +EK +E
Sbjct: 1325 KHTDEFANEVRTTFENAMQYNSEDQDVYSLAKDMLSDFNGEMRKVAAEIDVDEKAARAKE 1384
Query: 224 AKAQL 228
+ +L
Sbjct: 1385 SSCRL 1389
>gi|297723469|ref|NP_001174098.1| Os04g0622700 [Oryza sativa Japonica Group]
gi|255675790|dbj|BAH92826.1| Os04g0622700 [Oryza sativa Japonica Group]
Length = 355
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 19/245 (7%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTGYRN 165
Q A R+ + W F PV+V+ LGL DY+ VI+ PMD T++ N G+ Y +
Sbjct: 7 QILAKLRKDKRSIW---FNAPVEVDRLGLQDYHAVIKCPMDLGTVRANLAAGR----YPS 59
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ AD+RL F NA++YN +VH A LL FE+ + + +E K E
Sbjct: 60 HDDFAADIRLTFSNALRYNPAGHEVHTFAGDLLASFEKMYKASVSWFEQELKILEPPMPV 119
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
++ + Q ++ V M+ RE R+M+ EEK L L L
Sbjct: 120 PPPELPPAKAPAQ------VKPRAGNVKMRKTKAREP---NKREMTLEEKNLLRVGLESL 170
Query: 286 SPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAA--SRSSGD 343
E + L+IV + N + E++LD+D T W L FV + KA SR +
Sbjct: 171 PEEKMHNVLQIVRKRNGNPELVGGEIELDIDEMDVETQWELDRFVNKFKKALNKSRRAAI 230
Query: 344 MGGNN 348
+ G N
Sbjct: 231 VNGEN 235
>gi|388581469|gb|EIM21777.1| Bromodomain-containing protein [Wallemia sebi CBS 633.66]
Length = 596
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 114/252 (45%), Gaps = 31/252 (12%)
Query: 106 RQFAAIFRQI---TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R A I +++ +A PF PVD LGL DY +V+++PMD ST+ K++ D
Sbjct: 253 RHCAYILKELHKKVHSSYASPFYDPVDYIALGLPDYPQVVQQPMDLSTVGQKLNLGD--- 309
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-----KVMEEEK 217
Y + + D++L+F N KYN VH + F+EKW QL P ++ ++E
Sbjct: 310 YEGPSDFFGDMKLMFGNCYKYNPPGTPVHEAGRQTEAVFDEKWTQLPPLSTPLEISDDEN 369
Query: 218 RQEEEEAKAQL-DMQ--LTQEAVQTNKAKELRSELNEVDMQLENLRETV--IQKCRKMST 272
+ + Q+ DMQ LT + A E S + T + + R+ S
Sbjct: 370 SDAVKALQRQIEDMQKSLTDIKKKGTGAPERVSTGGGGSGRGGKRGSTGGQVGRPRRKSY 429
Query: 273 EE--------------KKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQ 318
+E KK L + +L + L KA++I+ E + E++LD+D
Sbjct: 430 DEDDENYQIPEITFDMKKELAGKIQQLEGDQLDKAIKIIYETL-DLDNNSDEIELDIDVL 488
Query: 319 SELTLWRLKVFV 330
TL +L +FV
Sbjct: 489 PVKTLQKLYMFV 500
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK----MDGKDGTGYR 164
+++ +Q+ + K A PF+ PVD +G+ Y EVI +P D T+ K + ++G GY
Sbjct: 89 SSLVKQLKKMKAAVPFLSPVDYISMGIPHYPEVISEPSDLGTVDRKVQKTIKAEEG-GYY 147
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
N + DVR +F+N +N V M K + E F+++ ++ P
Sbjct: 148 NFNDWETDVRRIFRNTEWFNGHEHPVSKMGKQVEESFDKQLKKMPP 193
>gi|413917011|gb|AFW56943.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 15/286 (5%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++ ++R+ A I ++ + K + F PVDVEGL LHDY +I PMD T+K +
Sbjct: 137 VEAMRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTA--- 193
Query: 161 TGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
G E +A DVRL F NA++YN VH A LL FE + + V E+++
Sbjct: 194 -GRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQR 249
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
++ E QLD+ Q + +++ L + + K R+M EEK+ L
Sbjct: 250 QQLEPPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLR 308
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKA 336
+ L + + L+IV + N + + V+LD D TLW L FV +++LK
Sbjct: 309 VEIENLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKK 368
Query: 337 ASRSS---GDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDA 379
+ R+S GD N + D D+ + NP EI ++
Sbjct: 369 SQRNSRMNGDAAVMNADAIDATIVPDDDDRVEVAVNPSVVVEIGES 414
>gi|357134548|ref|XP_003568879.1| PREDICTED: transcription factor GTE8-like, partial [Brachypodium
distachyon]
Length = 574
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
RQ + ++ H W F PVD G+ DY++VI PMD T+K K+ K+ Y +
Sbjct: 64 RQCKNVLEKLMGHTGGWLFHEPVDPVLFGIPDYFDVIRNPMDLGTVKKKLTNKN---YPS 120
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F NAMKYN + VH +A+ L F+ +W
Sbjct: 121 TDEFAADVRLTFSNAMKYNPPGNFVHTVAEQLNGIFDSEW 160
>gi|57282314|emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
Length = 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +HK W F PVD E LGLHDY+++I++P+D T+K+ + Y + E
Sbjct: 199 ILAKLMKHKNGWIFNIPVDAEALGLHDYHQIIKRPIDLGTVKSNL---AKNFYPSPFEFA 255
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
ADVRL F NA+ YN + D V+ A+ LL +FE+ + L
Sbjct: 256 ADVRLTFNNALLYNPKTDQVNGFAEQLLGRFEDMFRPL 293
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 268 RKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLK 327
R M+ EEK LG L L E + + ++I+ + N E++LD++A TLW L
Sbjct: 407 RVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 466
Query: 328 VFVQESLKAASRS 340
FV K S++
Sbjct: 467 RFVTNWKKMVSKT 479
>gi|66800045|ref|XP_628948.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|74896738|sp|Q54BA2.1|Y3800_DICDI RecName: Full=Ankyrin repeat, bromo and BTB domain-containing
protein DDB_G0293800
gi|60462310|gb|EAL60533.1| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 806
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K + F PVD G+ DY++VI+ PMD TIK K+D GY +++ ADVRL+F+
Sbjct: 536 KTSLAFQRPVDPLAEGIPDYFDVIKHPMDLGTIKGKLDN---NGYSTIKDFAADVRLMFE 592
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
NA+ YN + V AK+LL F++K+LQ P
Sbjct: 593 NALTYNADSSPVWKHAKTLLNAFDQKFLQNFP 624
>gi|413917010|gb|AFW56942.1| hypothetical protein ZEAMMB73_709520 [Zea mays]
Length = 487
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 133/286 (46%), Gaps = 15/286 (5%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++ ++R+ A I ++ + K + F PVDVEGL LHDY +I PMD T+K +
Sbjct: 137 VEAMRRRCADILTRLRRSKKSVWFNSPVDVEGLKLHDYRAIIRSPMDLGTVKQNLTA--- 193
Query: 161 TGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
G E +A DVRL F NA++YN VH A LL FE + + V E+++
Sbjct: 194 -GRYPSHEAFAGDVRLTFNNALRYNPPDHHVHRYAGDLLATFEGMYKE---AVSWFEQQR 249
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLG 279
++ E QLD+ Q + +++ L + + K R+M EEK+ L
Sbjct: 250 QQLEPPMQLDLLPPPPPPQLPVSVPVQAPLRMWGGRRPKPKARQPNK-REMDEEEKQKLR 308
Query: 280 TALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV---QESLKA 336
+ L + + L+IV + N + + V+LD D TLW L FV +++LK
Sbjct: 309 VEIENLPEDKVLNVLQIVQKRNRDPALSGEVVELDFDELDIETLWELDRFVVNWRKALKK 368
Query: 337 ASRSS---GDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDA 379
+ R+S GD N + D D+ + NP EI ++
Sbjct: 369 SQRNSRMNGDAAVMNADAIDATIVPDDDDRVEVAVNPSVVVEIGES 414
>gi|240256475|ref|NP_201137.5| nuclear protein X1 [Arabidopsis thaliana]
gi|327488242|sp|Q9FGW9.2|GTE10_ARATH RecName: Full=Transcription factor GTE10; AltName:
Full=Bromodomain-containing protein GTE10; AltName:
Full=Nuclear protein X1; AltName: Full=Protein GLOBAL
TRANSCRIPTION FACTOR GROUP E10
gi|332010349|gb|AED97732.1| nuclear protein X1 [Arabidopsis thaliana]
Length = 1061
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 116/236 (49%), Gaps = 14/236 (5%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
++ + ++ HK WPF PVD L + DY+ VI+ PMD TI++++ + Y +
Sbjct: 163 KECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGE---YSS 219
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
+ ADVRL F N++ YN + H MA+ + + FE W + K+ + +
Sbjct: 220 PLDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSS 279
Query: 226 AQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
A L+ ++ E K + + +N+ +++E + M+ EKK LG L L
Sbjct: 280 ASLESEIPFEVAPMRKKE---AAMNDNKLRVEPAKLV-------MTDGEKKKLGQDLMAL 329
Query: 286 SPEDLCKALEIVAENNPSFHATAQ-EVDLDMDAQSELTLWRLKVFVQESLKAASRS 340
+ K +++ E + S + + E+++D++A S+ L+ ++ + + L+ +S
Sbjct: 330 EEDFPQKIADLLREQSGSDGQSGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>gi|218200605|gb|EEC83032.1| hypothetical protein OsI_28113 [Oryza sativa Indica Group]
Length = 481
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 106/247 (42%), Gaps = 11/247 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK-NKMDGKDGTG 162
++++ I ++ + K + F PVDVE L LHDY+ +I PMD T+K N G+
Sbjct: 137 MRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENLAFGR---- 192
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + ADVRL F NA++YN VH A +LL FE + + L +E +R E
Sbjct: 193 YPSHEAFAADVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPP 252
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
A + + + + R+MS EEK L +
Sbjct: 253 MPLALPPPPQPPVPMPMQAPPRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEI 306
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSG 342
L E + L+IV + N + V+LD D TLW L FV KA S+S
Sbjct: 307 GNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFVVNCKKALSKSRR 366
Query: 343 DMGGNNN 349
+ N +
Sbjct: 367 TVAMNGD 373
>gi|392885383|ref|NP_491384.3| Protein BET-1, isoform a [Caenorhabditis elegans]
gi|351060603|emb|CCD68309.1| Protein BET-1, isoform a [Caenorhabditis elegans]
Length = 853
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I++PMD ++K KM + Y+ + DVRL+ +N
Sbjct: 281 FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKM---ESGAYKEPSDFEHDVRLMLRN 337
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
YN D VH E F+ +W +L
Sbjct: 338 CFLYNPVGDPVHSFGLRFQEVFDRRWAEL 366
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L + ++ +HK WPF PVD L + Y+E + +PMD TI+N++
Sbjct: 39 RHTNKLDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRL--- 95
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
T Y +E D+ VF+N +N + DDV +MA+++ E ++ K +E+ R
Sbjct: 96 KSTYYTCAQECIDDIETVFQNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPR 147
Query: 219 QEEE 222
+E +
Sbjct: 148 EEHD 151
>gi|198425802|ref|XP_002127242.1| PREDICTED: similar to bromodomain-containing protein 2 [Ciona
intestinalis]
Length = 1083
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
++WPF VD + LGLHDYY++I+ PMD T++ KM+ ++ YR E D+RL+ N
Sbjct: 377 FSWPFYKSVDADLLGLHDYYDMIKNPMDLGTMRKKMESRE---YRTPDEFAYDMRLIVTN 433
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN DV MAK L + FE K+ ++
Sbjct: 434 CYKYNPPDHDVVAMAKKLSDVFEMKFAKM 462
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + +H +AWPF PVD LGL DY+++I+ PMD + IK K++
Sbjct: 33 GRVTNQLQYLRKVVMTSLWKHHFAWPFHVPVDPVKLGLPDYFDIIKHPMDMALIKKKLET 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y + +E D L+F N YN DDV +MA++L + F +K
Sbjct: 93 NQ---YYSAKECLQDFNLMFSNCYIYNKPTDDVVLMAQTLEKNFLQK 136
>gi|313226820|emb|CBY21965.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 116/276 (42%), Gaps = 60/276 (21%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R AAI R++ Q + +AWPF PVDV+GL LHDYY+VI++PMD S + + D
Sbjct: 238 RVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNI---DNDM 294
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + E AD+ L+F+N YN +V MA L + FE K + EE
Sbjct: 295 YNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEES 354
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLR---------------------- 260
+ + + K ++++ +L EV QL L
Sbjct: 355 DFGDS-----DSDDERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAG 409
Query: 261 --------ETVI------QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVA-------E 299
E I + ++M+ +EK+ L + RL + L + + I+ E
Sbjct: 410 KKGGNRDGEGAIYDFDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYRE 469
Query: 300 NNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+NP E+++D D TL L +V LK
Sbjct: 470 HNPD------EIEIDFDTLKTATLRELDTYVSFCLK 499
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
++Q +K+ IF + HK+AWPF PVD L L DY+ +I+ PMD ST+K K+ G
Sbjct: 12 QLQYIKKH---IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYGGQ 68
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEK 217
Y + ++ AD L+F+N YN DD+ +M K + + K + + V+E++K
Sbjct: 69 ---YESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQK 125
Query: 218 RQE 220
R++
Sbjct: 126 RKK 128
>gi|384499244|gb|EIE89735.1| hypothetical protein RO3G_14446 [Rhizopus delemar RA 99-880]
Length = 570
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 106 RQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+ A+ ++ + K+A WPF PVD G DYY++I+ PMD STI+NK +
Sbjct: 155 KHCASAIKEFKKPKYAHLTWPFERPVDAAAWGATDYYDIIQHPMDMSTIENKFKNAE--- 211
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y N + Y D +L+F N KYN +VH++ K E F++ W ++ K E +++
Sbjct: 212 YTNEDQFYDDYKLMFSNCYKYNPPHHEVHLLGKKFEEDFDKHWNKIHDKPKERAVKKQRV 271
Query: 223 EAKAQLDMQLTQEAVQTNKAKE 244
+ + T++ VQ + E
Sbjct: 272 DQDVMITPPTTEDEVQVKQNTE 293
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 70 IAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVD 129
I+ + R ASI Q E+ + + KR ++ +H A PF+ PVD
Sbjct: 2 ISNNSAQKRPYASIAADNQTRKEEEKFSEHMSVQDKRLVTETLTKLMKHPCAGPFLQPVD 61
Query: 130 VEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDD 189
+ DY+++I+ PMD STI+ K++ Y++ E ADV L+ N YN+ D
Sbjct: 62 PVFFNIPDYFDIIKHPMDLSTIQTKLN-----NYQSKEEFIADVELMLDNCYLYNNATDP 116
Query: 190 VHVMAKSLLEKF 201
V A+ L + F
Sbjct: 117 VCDQARELEKAF 128
>gi|313212448|emb|CBY36425.1| unnamed protein product [Oikopleura dioica]
Length = 548
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 116/276 (42%), Gaps = 60/276 (21%)
Query: 106 RQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
R AAI R++ Q + +AWPF PVDV+GL LHDYY+VI++PMD S + + D
Sbjct: 238 RVCAAILRELHQKRHQQYAWPFYVPVDVKGLELHDYYDVIKRPMDLSLAQKNI---DNDM 294
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y + E AD+ L+F+N YN +V MA L + FE K + EE
Sbjct: 295 YNDKNEFIADIMLIFENCRAYNPPDHEVVQMANRLQKVFEAKVAESFSSADAAANHSEES 354
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLR---------------------- 260
+ + + K ++++ +L EV QL L
Sbjct: 355 DFGDS-----DSDDERGRKLQQIQKKLREVQEQLAYLMDLQARLVKAGKRKKKKGDMGAG 409
Query: 261 --------ETVI------QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVA-------E 299
E I + ++M+ +EK+ L + RL + L + + I+ E
Sbjct: 410 KKGGNRDGEGAIYDFDSDEDHKEMTYDEKRQLSLDINRLPSDKLGRVVTIIQNREAHYRE 469
Query: 300 NNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLK 335
+NP E+++D D TL L +V LK
Sbjct: 470 HNPD------EIEIDFDTLKTATLRELDTYVSFCLK 499
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
++Q +K+ IF + HK+AWPF PVD L L DY+ +I+ PMD ST+K K+
Sbjct: 12 QLQYIKKH---IFMTLWNHKFAWPFQKPVDPVELNLPDYFTIIKNPMDMSTLKKKLYSGQ 68
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW--LQLLPKVMEEEK 217
Y + ++ AD L+F+N YN DD+ +M K + + K + + V+E++K
Sbjct: 69 ---YESAKQCIADYDLMFENCYNYNRPTDDISIMGKKIQDLLHTKCKNMPQVEAVVEKQK 125
Query: 218 RQE 220
R++
Sbjct: 126 RKK 128
>gi|167515986|ref|XP_001742334.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778958|gb|EDQ92572.1| predicted protein [Monosiga brevicollis MX1]
Length = 497
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ I + +H AWPF PVD + LGL Y E+I PMD TI+NK+
Sbjct: 80 GRMTNQLQYISKVILPTLNKHPSAWPFKKPVDWKKLGLLSYPEIIANPMDLGTIRNKLRK 139
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
K+ Y + RE D+ LV+ N +N DDV++M+++L E + Q+L + E E
Sbjct: 140 KE---YFSGRECLDDIELVWHNCQTFNRPSDDVYIMSQAL----ESDYKQMLANLPEPEV 192
Query: 218 RQEEEEAKAQ 227
+ AKA+
Sbjct: 193 PLDRPSAKAK 202
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
AA R+ R I + + K +AWPF PVD+ L + DYY+VI++PMD T++
Sbjct: 238 AASSRLPAHMRVCYDIIKDLFGKKHQAYAWPFYEPVDIVKLNIPDYYDVIKQPMDLGTVR 297
Query: 153 NKMDGKDGTGYRNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K++ G R+ +A DVRLVF N YN DV MAKS E FE +W
Sbjct: 298 TKLE----EGEYETRDDFAHDVRLVFANCYTYNPPGSDVVKMAKSTSEVFELQW 347
>gi|308804515|ref|XP_003079570.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
gi|116058025|emb|CAL54228.1| Protein involved in transcription initiation at TATA-containing
promoters; associates with the basal transcription
factor TFIID; contains two bromodom (ISS) [Ostreococcus
tauri]
Length = 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 137/326 (42%), Gaps = 59/326 (18%)
Query: 69 SIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPV 128
+ +KLKD + ++ Q++ + E+ R +E+ R+ + +H++ F+ PV
Sbjct: 26 GVGYKKLKDGRPVTTKRLQRE-YEIEQDREARRKEMVRRCREVLNLTKKHRYHKIFLFPV 84
Query: 129 DVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERD 188
D G+ DY ++++ PMD T+K K+D + Y + AD+RL+F N YN +
Sbjct: 85 DPVRQGIPDYPQIVKNPMDLGTVKRKLDERK---YVGPEDFCADMRLIFSNCALYNGSQS 141
Query: 189 DVHVMAKSLLEKFEEKWLQ-------------------------LLPKVME--------- 214
D +M +++ + FE WLQ P +E
Sbjct: 142 DAGIMGETVHQGFEAAWLQSGLDDWTASEQTIRAQEEIDIRNTPTTPISVEAVAVQEARE 201
Query: 215 ---------EEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQ 265
EE ++ ++EA D + A+Q +E+R ++ +T +
Sbjct: 202 QLENMRREIEELKRAKQEAIPSRDRSRVRAALQERNEREIRMKIRTSTSMTHEWTKTCTE 261
Query: 266 KCRKMSTEEKKN-----------LGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDL 313
R+ + EKK+ GT + S C+ ++IV+E A E+++
Sbjct: 262 SSRRRAEREKKSSARLVLRWLCPSGTCHSMKSTNSRCRVIQIVSEQRKGLGQADDDEIEI 321
Query: 314 DMDAQSELTLWRLKVFVQESLKAASR 339
+++ TLW+L +V+ L+ R
Sbjct: 322 NIEELDSETLWKLDKYVRGVLRPKKR 347
>gi|395854578|ref|XP_003799760.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific
protein-like [Otolemur garnettii]
Length = 773
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
++ E R + I +++ K +AWPF + VDV LGLH+Y ++++ PMD TIK KMD
Sbjct: 198 KVTEQLRHCSEILKEMLAKKHFSYAWPFYNSVDVNALGLHNYXDIVKHPMDLGTIKWKMD 257
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ Y++ E ADVRL+ N KYN +V M K L + FE + ++
Sbjct: 258 NQE---YKDAYEFAADVRLMLMNCYKYNPPDHEVVTMTKMLQDVFEMHFXKI 306
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 146 MDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
MD +TIK ++ K Y E D+ +F N YN DD+ +MA++L + F
Sbjct: 1 MDLNTIKKHLENK---YYVKASECIEDLNTMFSNCYLYNKPXDDIVLMAQTLKKLF---- 53
Query: 206 LQLLPKVMEEEK--RQEEEEAKAQLDMQLTQEAVQTNKAK 243
+Q L ++ +EEK +E K++L+ EAV + K K
Sbjct: 54 IQKLSQMPQEEKVVGGKERIKKSKLEGTQQHEAVSSVKEK 93
>gi|66911387|gb|AAH97199.1| LOC100004566 protein [Danio rerio]
Length = 378
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 79 HVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDY 138
H+A Q A GR +L+ A+ + + +H +AWPF PVD L L DY
Sbjct: 232 HIAQ-SGPPQPAVRDPSRQGRMTNQLQFLQKALVKTLWRHHFAWPFHEPVDAAKLNLPDY 290
Query: 139 YEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y +I++PMD TIK +++ YR+ E D +F N YN DD+ +MA+SL
Sbjct: 291 YNIIKQPMDMGTIKKRLENN---YYRSASECMQDFNTMFTNCYIYNKPTDDIVLMAQSLE 347
Query: 199 EKFEEKWLQLLPKVMEE 215
+ F +K Q +P+V EE
Sbjct: 348 KAFLQKVAQ-MPEVEEE 363
>gi|58865638|ref|NP_001012031.1| bromodomain testis-specific protein [Rattus norvegicus]
gi|50927337|gb|AAH78999.1| Brdt protein [Rattus norvegicus]
gi|165971045|gb|AAI58631.1| Brdt protein [Rattus norvegicus]
Length = 326
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +IE PMD STIK +++
Sbjct: 25 GRLTNQLQFLQRVVLKALWKHSFSWPFQQPVDAAKLKLPDYYTIIETPMDLSTIKKRLEN 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 85 R---YYEKASECVGDFNTMFSNCYLYNKPGDDIVVMAQALEKLFMQKLSQM 132
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 9/87 (10%)
Query: 71 AKEKLKDRHVASI--EKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHK---WAWPFM 125
A +K+ V S+ + QQQ HR + ++LK + I +++ K +AWPF
Sbjct: 240 ANAPVKENTVKSVLPDSQQQ---HRVLKTVKVTEQLK-HCSEILKEMLAKKHLPYAWPFY 295
Query: 126 HPVDVEGLGLHDYYEVIEKPMDFSTIK 152
+PVDV+ LGLH+YY++++ PMD TIK
Sbjct: 296 NPVDVDALGLHNYYDIVKNPMDLGTIK 322
>gi|348690450|gb|EGZ30264.1| hypothetical protein PHYSODRAFT_310264 [Phytophthora sojae]
Length = 1333
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+I + + + + PF+ PVD LG+ DY+ VI++PMD TI++ ++ TG+ +
Sbjct: 338 SILKGLMSNPKSAPFLVPVDPVALGIPDYFHVIKEPMDLGTIRSNLE----TGFYDTPSA 393
Query: 170 YAD-VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+A+ VRLVF+NAM YN VH+ A+ L++ FE ++ L
Sbjct: 394 FAEHVRLVFRNAMLYNAAHSQVHIYARKLMDDFERRFKSL 433
>gi|330812863|ref|XP_003291336.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
gi|325078478|gb|EGC32127.1| hypothetical protein DICPUDRAFT_98971 [Dictyostelium purpureum]
Length = 564
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 120/247 (48%), Gaps = 14/247 (5%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+M E R I QI + K ++ F PVD E + DY+++I+ PMD STI +K+D
Sbjct: 319 SEQMNEKNRNLCKTILSQIFKKKISYAFQRPVDPELENIPDYFDIIKNPMDISTIDSKLD 378
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP-KVMEE 215
+ Y +++ ADVRL+F+NA+ YN E V+ AK LL F+ +++ P + +
Sbjct: 379 NE---KYGTIKDFAADVRLMFENALTYNAEISPVYKYAKQLLTYFDNSFIKNYPNEKIPT 435
Query: 216 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSEL-------NEVDMQLENLRETVIQKCR 268
K A A + + T ++L S++ N ++ +
Sbjct: 436 YKSLNPAPAAAPAQPNSSSGSANTPNKRKLDSDIKVKEETSTATTSSSTNDSKSSSPPAK 495
Query: 269 KMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKV 328
K S +E+KNL + LS ED+ L I+ ++ + + + + +++DM + L +++
Sbjct: 496 KYSDDERKNLMEKINELSAEDVQTVLSIIDQS--AINQSDESLEIDMYKIDDKNLRQVEQ 553
Query: 329 FVQESLK 335
F+ E K
Sbjct: 554 FLNECFK 560
>gi|268576585|ref|XP_002643272.1| Hypothetical protein CBG08144 [Caenorhabditis briggsae]
Length = 414
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
F + + + +PF PVD LGL DY+E+I+KPMD ST+K K+ G++ Y N E
Sbjct: 133 FEKGSHSGYTFPFRTPVDTVALGLTDYHEIIKKPMDMSTMKKKIVGEE---YDNAGEFKE 189
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
D +L+ N + YN++ D V MA + F KW ++ P
Sbjct: 190 DFKLMINNCLSYNNDGDPVSDMAIKFRKAFAAKWNKVFP 228
>gi|357476123|ref|XP_003608347.1| Bromodomain-containing protein [Medicago truncatula]
gi|355509402|gb|AES90544.1| Bromodomain-containing protein [Medicago truncatula]
Length = 390
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I +++ + K W F PVD L LHDY+++I+ PMD T+K+K+ Y E
Sbjct: 155 ILQKLMKTKIGWIFSSPVDPVALNLHDYFDIIKHPMDLGTVKSKL---AKNAYSTPAEFA 211
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
DV+L FKNA+ YN + DV+ A LLEKFEE
Sbjct: 212 DDVKLTFKNALTYNPKGHDVNTAAMQLLEKFEE 244
>gi|32564850|ref|NP_871879.1| Protein BET-1, isoform b [Caenorhabditis elegans]
gi|351060598|emb|CCD68304.1| Protein BET-1, isoform b [Caenorhabditis elegans]
Length = 765
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD E LGLHDY+++I++PMD ++K KM + Y+ + DVRL+ +N
Sbjct: 281 FAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKM---ESGAYKEPSDFEHDVRLMLRN 337
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
YN D VH E F+ +W +L
Sbjct: 338 CFLYNPVGDPVHSFGLRFQEVFDRRWAEL 366
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L + ++ +HK WPF PVD L + Y+E + +PMD TI+N++
Sbjct: 39 RHTNKLDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRL--- 95
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
T Y +E D+ VF+N +N + DDV +MA+++ E ++ K +E+ R
Sbjct: 96 KSTYYTCAQECIDDIETVFQNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPR 147
Query: 219 QEEE 222
+E +
Sbjct: 148 EEHD 151
>gi|115475161|ref|NP_001061177.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|40253661|dbj|BAD05604.1| putative RNA-binding protein Virp1a [Oryza sativa Japonica Group]
gi|113623146|dbj|BAF23091.1| Os08g0192800 [Oryza sativa Japonica Group]
gi|215678743|dbj|BAG95180.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765310|dbj|BAG87007.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767863|dbj|BAH00092.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640052|gb|EEE68184.1| hypothetical protein OsJ_26323 [Oryza sativa Japonica Group]
Length = 481
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 105/247 (42%), Gaps = 11/247 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ I ++ + K + F PVDVE L LHDY+ +I PMD T+K + G
Sbjct: 137 MRKRCTQILTRLRKQKISVWFNSPVDVERLKLHDYHAIIRNPMDLGTVKENL----AFGR 192
Query: 164 RNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
E +A DVRL F NA++YN VH A +LL FE + + L +E +R E
Sbjct: 193 YPSHEAFATDVRLTFSNALRYNPADHHVHRYASNLLATFEGLYKEALSWFEQECQRLEPP 252
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTAL 282
A + + + + R+MS EEK L +
Sbjct: 253 MPLALPPPPQPPVPMPMQAPPRIGGGGRRPKPKAREPNK------REMSDEEKHKLRVEI 306
Query: 283 TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSG 342
L E + L+IV + N + V+LD D TLW L FV KA S+S
Sbjct: 307 GNLPEEKMGNVLQIVQKRNTDPALMGEVVELDFDEMDVETLWELDRFVVNCKKALSKSRR 366
Query: 343 DMGGNNN 349
+ N +
Sbjct: 367 TVAMNGD 373
>gi|348585937|ref|XP_003478727.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 2 [Cavia porcellus]
Length = 2198
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ I K T +K V T+D + +TS S+ ++L
Sbjct: 2009 IAKASGQTIKIKKLH-----IKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKEL 2063
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2064 KKRKMEENTSINVSKQESFTSVKKSKRDDSKDLTLCSMILNEMETHEDAWPFLLPVNLKL 2123
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2124 V--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2178
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2179 AGHSMRKYFEKKW 2191
>gi|326925069|ref|XP_003208744.1| PREDICTED: bromodomain testis-specific protein-like [Meleagris
gallopavo]
Length = 824
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
++Q L+R + R + +H ++WPF PVD L L DYY +I+KPMD STIK ++ +
Sbjct: 31 QLQYLQR---VVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRL---E 84
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y E D + +F N YN DD+ MA+ L + F +K Q+ P
Sbjct: 85 HNYYTKAAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPP 135
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF+ DV L + + + P D TIK KMD + YR+++E DVRL+F N
Sbjct: 302 YAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFE---YRDIQEFATDVRLMFMN 358
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K+N +V MAK L + FE + ++
Sbjct: 359 CYKHNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|121707746|ref|XP_001271928.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
gi|119400076|gb|EAW10502.1| transcription regulator BDF1, putative [Aspergillus clavatus NRRL
1]
Length = 840
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 52/262 (19%)
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLV 176
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E DVR +
Sbjct: 499 YTWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDVRQI 554
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKW------------------------------- 205
FKN K+N D ++ + E FE KW
Sbjct: 555 FKNCFKFNIPGDPTYMAGQRFQEIFENKWAQKSRYLEAHEPHPEHQSVSSSEEESGEEEE 614
Query: 206 ---------LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA--KELRSELNEVDM 254
L +L K +EE RQ E + + + V +KA K+ + V +
Sbjct: 615 DSDYHDNEKLSMLQKQIEEMSRQVEAITQKKKKTPPGLKKVGKSKAGKKDSKKLATAVGL 674
Query: 255 QLENLRETV----IQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 309
++ + +V +K R ++ EK+ + ++ L + + +AL+I+ N P+ T +
Sbjct: 675 SKKDKKTSVKPSKPEKQRYVTYHEKQIISNGISSLPDKKMQEALKIIQSNVPALKGTQET 734
Query: 310 EVDLDMDAQSELTLWRLKVFVQ 331
E++LD+D L L FV+
Sbjct: 735 EIELDIDELPNDVLLMLLKFVK 756
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+Q LKR A F F PVD + + Y ++I+ PMD TI+ K+ +
Sbjct: 296 IQSLKRMNDARF-----------FREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNNE- 343
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y+ + + D L+ +NA+ +N V L FE++ + L
Sbjct: 344 --YKAAQAVVNDFHLMVQNAVTFNGPDHLVSQEGMKLQGTFEKQMVNL 389
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1979 IAKASGQTLKIKKLH-----VKGKKTNDSKKGKKVALTGDTEDEDSASTSSSLKRGSKDL 2033
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + S+ +QD+F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2034 KKRKIEENTSVSLSKQDSFTSVKKPKRDDSKDLAICSMILTEMETHEDAWPFLLPVNLKL 2093
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2094 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2148
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2149 AGHSMRKYFEKKW 2161
>gi|384493798|gb|EIE84289.1| hypothetical protein RO3G_08999 [Rhizopus delemar RA 99-880]
Length = 569
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 113/258 (43%), Gaps = 48/258 (18%)
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
+PF+HPVDV GL + DY ++++ PMD STI+ K++ DG Y + D+RL+F N
Sbjct: 254 YPFLHPVDVVGLNIPDYVDIVKHPMDLSTIEKKLN--DGE-YAEPEDFENDIRLMFNNCY 310
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKV-------------------------MEEE 216
YN VH M + L + F++KW Q PK ++
Sbjct: 311 LYNPPSLPVHKMGRQLEKAFDDKWAQRPPKTEPTPLVDDAPEEEFDEVVEEDDSEDERDQ 370
Query: 217 KRQEEEEAKAQLDMQLTQEAVQTNK--AKELRSELNEVDMQLENLRETVIQKCRKMST-- 272
K E E A + Q+ Q K A++ R N E +K R+ ST
Sbjct: 371 KIAELERHIATISQQIASIKSQKRKKGAEKPRRTSNVNKTIKEKKPSAPKEKRRRTSTTN 430
Query: 273 --------------EEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDMDA 317
++KK+L + L+ + L ++I+ + P+ Q E+ LD+D+
Sbjct: 431 KKKEKKEELPEFTFDQKKDLSERINNLTGDRLNTVVDIIRSSMPNLDGQGQEEIVLDIDS 490
Query: 318 QSELTLWRLKVFVQ-ESL 334
TL RL FV ESL
Sbjct: 491 LDRSTLHRLHEFVTGESL 508
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
AI R + +H+ A PF+ PVD L + DY ++I PMD +T+ K++ Y +V +
Sbjct: 62 GAIMRNLKKHRDAAPFLQPVDYVKLNIPDYPKIIRHPMDLATVDKKLNSGQ---YDSVDQ 118
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
DVRLVF N K+N V ++ +++ FE+ Q+ P
Sbjct: 119 WIYDVRLVFNNCFKFNGPEAMVSMLCQNVESAFEKSLRQMPP 160
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
isoform 1 [Cavia porcellus]
Length = 2170
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ I K T +K V T+D + +TS S+ ++L
Sbjct: 1981 IAKASGQTIKIKKLH-----IKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKEL 2035
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2036 KKRKMEENTSINVSKQESFTSVKKSKRDDSKDLTLCSMILNEMETHEDAWPFLLPVNLKL 2095
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2096 V--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2150
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2151 AGHSMRKYFEKKW 2163
>gi|323447957|gb|EGB03862.1| hypothetical protein AURANDRAFT_55416 [Aureococcus anophagefferens]
Length = 628
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
F + + + Q ++PFM PVD E LGL DY++V++ PMD T++ ++ G Y N
Sbjct: 316 HFVNLLKHVVQQPSSYPFMAPVDAEALGLADYHDVVKAPMDLGTVERRL---GGGSYANP 372
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
+++ DVRL F NA KYN VH A L FE+K LL
Sbjct: 373 QKLVDDVRLTFANAQKYNPPAHPVHEAATHLGCVFEKKLQNLL 415
>gi|345565069|gb|EGX48025.1| hypothetical protein AOL_s00081g352 [Arthrobotrys oligospora ATCC
24927]
Length = 890
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 54/277 (19%)
Query: 117 QH-KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
QH A+PF +PVD L + DY+++I+KPMD S I+ K++ + Y N E AD+RL
Sbjct: 543 QHNSIAYPFYNPVDPVALEIPDYFKIIKKPMDMSEIQRKLNHNE---YNNSNEFEADIRL 599
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 235
+F N K+N V+ K L F+EKW Q +EE A+ + E
Sbjct: 600 MFNNCYKFNPPSSPVYDCGKQLEAVFDEKWSQK--PSFKEETPTPPVVAEEEEGEDSDDE 657
Query: 236 AVQTNKAKE---LRSELNEVDMQLENLRE-----------------------TVIQKCRK 269
+ A L+++L + Q+E + + V++ K
Sbjct: 658 DSDEDAAPALEMLKAQLGAIHSQIETIEKKKKSKKSPPATSKKHKKSSSTGAAVVKPTPK 717
Query: 270 ---------------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 308
M+ +K L + +LSP + + L ++ +P A
Sbjct: 718 TTPLNKKKGSSSKKKEPPVPYMTFAQKTELSERINQLSPHKMQQVLSLIKTYHPDL-AEG 776
Query: 309 QEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMG 345
E++LD+D + T+ +L +FV E+ + S+ +
Sbjct: 777 DEIELDIDELAPATVHKLYIFVTENTLPPAESAAPVA 813
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
G M + +FA + + I + K A F++PVD L L Y+E+I+ PM I+ K+
Sbjct: 301 GDPMPIHQTKFALSNLKNIKRLKDAQAFLNPVDPVKLQLPTYFEIIKNPMSLFDIEKKLT 360
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
+ Y N E+ DV L+ +N++ +N H + +S + +K+L L K+ E
Sbjct: 361 ANE---YHNPAELKGDVHLMVQNSILFNGVE---HAVTQSGIH-IRDKYLHALEKMPPAE 413
>gi|159794742|pdb|2DWW|A Chain A, Crystal Structure Of Bromodomain-Containing Protein 4
Length = 114
Score = 82.8 bits (203), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVDVE LGLHDY ++I+ P D STIK+K++ ++ YR+ +E ADVRL F N
Sbjct: 27 YAWPFYKPVDVEALGLHDYCDIIKHPXDXSTIKSKLESRE---YRDAQEFGADVRLXFSN 83
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKW 205
KYN +V A+ L + FE ++
Sbjct: 84 CYKYNPPDHEVVAXARKLQDVFEXRF 109
>gi|317038280|ref|XP_001401977.2| transcription regulator BDF1 [Aspergillus niger CBS 513.88]
Length = 835
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 495 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 551
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
KN K+N D ++ + L E+F +KW Q
Sbjct: 552 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 16/128 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+ +Q LKR + F + PVD L + Y + I++PMD TI+ K+
Sbjct: 291 KSIQSLKRMHDSRF-----------YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKL--- 336
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEK 217
YR + + D L+ +NA+ +N V + L F +K + LP+ E EEK
Sbjct: 337 KNNVYRTAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEEK 395
Query: 218 RQEEEEAK 225
+ ++ AK
Sbjct: 396 KPKKSVAK 403
>gi|358366386|dbj|GAA83007.1| transcription regulator Bdf1 [Aspergillus kawachii IFO 4308]
Length = 835
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 495 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 551
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
KN K+N D ++ + L E+F +KW Q
Sbjct: 552 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 582
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+ +Q LKR + F + PVD L + Y + I++PMD TI+ K+
Sbjct: 291 KSIQSLKRMHDSRF-----------YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKLKNN 339
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEK 217
+ YR + + D L+ +NA+ +N V + L F +K + LP+ E EEK
Sbjct: 340 N---YRTAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEEK 395
Query: 218 RQEEEEAK 225
+ ++ AK
Sbjct: 396 KPKKSVAK 403
>gi|406602290|emb|CCH46128.1| Bromodomain-containing factor 1 [Wickerhamomyces ciferrii]
Length = 683
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 117/248 (47%), Gaps = 33/248 (13%)
Query: 111 IFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
+ +++T K+ +PF+ PVD L Y++ + +PMD ST++NK++ Y N
Sbjct: 367 VLKELTSKKYESFNYPFLEPVDPVALNCPTYFDYVSEPMDLSTVQNKLNN---NIYENAD 423
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQ 227
E D+RL+F+N +N E V++M L F+++W+ V +Q ++E + +
Sbjct: 424 EFERDIRLIFQNCYSFNPEGTAVNMMGHRLEAVFDKRWVDR--PVTPATPQQSDDEEEEE 481
Query: 228 LDMQLTQEAVQTNKAKE-LRSELNEVDMQLENLRETVIQKCRK----------------- 269
+ + E+ TN A + L +L + +QL L++ ++K R+
Sbjct: 482 SEEEEIDESAITNPAIQFLEQQLETMKLQLAKLKKEELEKIRRERSKKKKSSKPKKRRRR 541
Query: 270 -------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELT 322
++ E KK L + LS L + L I+ E + +E++LDMD T
Sbjct: 542 TSDASFTVTYEMKKELSEKMGELSERKLNQVLSIIGEALNINSSNGEEIELDMDQLDNAT 601
Query: 323 LWRLKVFV 330
L +L FV
Sbjct: 602 LVKLYTFV 609
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 115 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 174
I + K A PF+HPVD L + YY I +PMD STI+ K+ + Y ++E D
Sbjct: 198 IKRMKDAGPFLHPVDTVKLQIPLYYNFITRPMDLSTIERKL---NANAYAELQEFIDDFN 254
Query: 175 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
L+ N +++N + M++++ FE+ L PK
Sbjct: 255 LMVDNCVRFNGAESGIAQMSRNIQASFEKHMLNAPPK 291
>gi|255947958|ref|XP_002564746.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591763|emb|CAP98009.1| Pc22g07210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 812
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ W PF +PVD L + Y+ VI+KPMD ST+++K+ TG Y N +E +DVRL
Sbjct: 479 HYNWVMPFYYPVDPVALNIPSYHSVIKKPMDLSTVQSKLK----TGQYENAKEFESDVRL 534
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ---------------------------- 207
+FKN ++N D +V + E F KW Q
Sbjct: 535 IFKNCYRFNIPGDPTYVCGERAEEIFNGKWAQKSDYLEAHEPHPEQNTDSSDEDSDEDAE 594
Query: 208 ----------LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLE 257
LL K + E RQ EA + + + K K + + ++
Sbjct: 595 ESEEDDEKLTLLQKQIAEMSRQ--VEAITNKKKKTPPSSKKVGKTKLAKKDSKKLSSGKR 652
Query: 258 NLRETVIQ--KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLD 314
+ + V Q K R ++ EK+ + ++ L + + +AL+I+ N P T + E++LD
Sbjct: 653 DKKSKVSQPGKTRAVTYNEKQIISNGISSLPDKRMQQALQIIQNNVPQLKGTDEAEIELD 712
Query: 315 MDAQSELTLWRLKVFVQESL 334
+D L +L FV++ +
Sbjct: 713 IDELPNDVLLKLLNFVKKHV 732
>gi|134074582|emb|CAK38875.1| unnamed protein product [Aspergillus niger]
Length = 793
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 453 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 509
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
KN K+N D ++ + L E+F +KW Q
Sbjct: 510 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 540
>gi|47201045|emb|CAF89147.1| unnamed protein product [Tetraodon nigroviridis]
Length = 378
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF PVD LGLHDY+++I++PMD STIK KMD ++ Y + ++ ADVRL+F N
Sbjct: 268 YAWPFYKPVDASSLGLHDYHDIIKQPMDLSTIKRKMDNRE---YLDSQQFAADVRLMFSN 324
Query: 180 AMKYNDE 186
KYN
Sbjct: 325 CYKYNPP 331
>gi|238485866|ref|XP_002374171.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
gi|317144623|ref|XP_001820248.2| transcription regulator BDF1 [Aspergillus oryzae RIB40]
gi|220699050|gb|EED55389.1| transcription regulator BDF1, putative [Aspergillus flavus
NRRL3357]
Length = 812
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFK 178
+A PF PVD L + Y+ +I+KPMD ST++ K+ TG Y N +E D+RL+FK
Sbjct: 473 YAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLK----TGQYENAKEFELDMRLIFK 528
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK------------- 225
N K+N D ++ + E F KW Q + E E K
Sbjct: 529 NCFKFNIPGDPTYLAGQKFEEIFNSKWSQKARYLEAHEPHPEHHSGKSESESDESDEDAD 588
Query: 226 ---------------AQLDMQLTQEAVQ----------TNKAKELRSELNEV----DMQL 256
A++ Q+ EA+ + KA +L+S E+ M L
Sbjct: 589 DSDDDEELQRLQQKIAEMTRQV--EAIAQKKKKKTPPGSKKAGKLKSSTKEIKKPGSMNL 646
Query: 257 ------ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 309
+++ + +K R ++ +EK+ + ++ L + + +AL+I+ N PS T +
Sbjct: 647 PKKDKKSSIKPSKPEKQRWVTYQEKQIISNGISSLPDKKMQEALKIIQSNVPSLKGTQET 706
Query: 310 EVDLDMDAQSELTLWRLKVFVQE 332
E++LD+D L L FV++
Sbjct: 707 EIELDIDELPNDVLLMLLRFVKK 729
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+Q LKR + F + PVD E + + Y ++I +PMD TI+ ++ +
Sbjct: 269 IQSLKRMHDSRF-----------YREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNE- 316
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 217
Y++V+ + D L+ +N++ +N V + L FE++ + P +EE K
Sbjct: 317 --YKSVKAVVDDFNLMVQNSLTFNGPDHIVAQEGQKLKSTFEKQMINCPRPDDIEERK 372
>gi|326494522|dbj|BAJ94380.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 274
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H W F PVD + G+ DY++VI PMD T+K K+ K Y + +
Sbjct: 87 ILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS---YLSTDDFA 143
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN + VH +A+ L F +W E K + QL M
Sbjct: 144 ADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSY------ERKWIDRNLKPVQLPM 197
Query: 231 QLTQEAVQTN 240
++ + V N
Sbjct: 198 KVIKAHVAVN 207
>gi|83768107|dbj|BAE58246.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871763|gb|EIT80920.1| transcription initiation factor TFIID, subunit BDF1 [Aspergillus
oryzae 3.042]
Length = 762
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 56/263 (21%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFK 178
+A PF PVD L + Y+ +I+KPMD ST++ K+ TG Y N +E D+RL+FK
Sbjct: 423 YAVPFYQPVDPVALNIPTYHSIIKKPMDLSTMQTKLK----TGQYENAKEFELDMRLIFK 478
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK------------- 225
N K+N D ++ + E F KW Q + E E K
Sbjct: 479 NCFKFNIPGDPTYLAGQKFEEIFNSKWSQKARYLEAHEPHPEHHSGKSESESDESDEDAD 538
Query: 226 ---------------AQLDMQLTQEAVQ----------TNKAKELRSELNEV----DMQL 256
A++ Q+ EA+ + KA +L+S E+ M L
Sbjct: 539 DSDDDEELQRLQQKIAEMTRQV--EAIAQKKKKKTPPGSKKAGKLKSSTKEIKKPGSMNL 596
Query: 257 ------ENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ- 309
+++ + +K R ++ +EK+ + ++ L + + +AL+I+ N PS T +
Sbjct: 597 PKKDKKSSIKPSKPEKQRWVTYQEKQIISNGISSLPDKKMQEALKIIQSNVPSLKGTQET 656
Query: 310 EVDLDMDAQSELTLWRLKVFVQE 332
E++LD+D L L FV++
Sbjct: 657 EIELDIDELPNDVLLMLLRFVKK 679
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+Q LKR + F + PVD E + + Y ++I +PMD TI+ ++ +
Sbjct: 219 IQSLKRMHDSRF-----------YREPVDPEKMNIPHYPQIIRQPMDLGTIERRLKNNE- 266
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 217
Y++V+ + D L+ +N++ +N V + L FE++ + P +EE K
Sbjct: 267 --YKSVKAVVDDFNLMVQNSLTFNGPDHIVAQEGQKLKSTFEKQMINCPRPDDIEERK 322
>gi|213406251|ref|XP_002173897.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001944|gb|EEB07604.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 726
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 117 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
QH+ +A+PF PVD G DY++VI+ PMD T++NK++ + Y N+++ ADV L
Sbjct: 409 QHETYAYPFYQPVDPVAFGCPDYFKVIKHPMDLGTMQNKLNHNE---YANIKDFEADVNL 465
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
VFKN ++N V++M K L F KW +
Sbjct: 466 VFKNCYRFNPPGTPVYLMGKKLETVFRSKWAE 497
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
A+ RQ+ + + + PF PVD + DY +I+ PMD ST++ K+ ++ Y + +
Sbjct: 247 AMLRQLRRCRDSIPFRVPVDPVKQNIPDYPLIIKHPMDLSTMQRKLTNRE---YDSAQSF 303
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D+ L+F N YN V VM K+L F ++ QL
Sbjct: 304 IDDMNLMFDNCFLYNGTESPVGVMGKNLQATFTKQLKQL 342
>gi|213405871|ref|XP_002173707.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001754|gb|EEB07414.1| bromodomain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 596
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 11/193 (5%)
Query: 21 GDTVEVEGLNKTIDDILQK-VTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRH 79
G T V + K I+ I ++ + QL D+ TK +T+ S S A+ + + H
Sbjct: 143 GTTSPVGVMGKNIETIFERQLKQLPSSNADLPPTKKTKRRG--STASSTSTAETRSRKLH 200
Query: 80 --VASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKW---AWPFMHPVDVEGLG 134
S+ + ++ R++ R + I +++ + ++ A+PF PVD
Sbjct: 201 SPAVSVPAPPVAVVNDTKSQRRKLSSQMRFCSTIIKELHKRQYSTFAYPFYQPVDPVACD 260
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
DY+++I+ PMD ST++ K++ + Y + AD+RL+F N YN VH M
Sbjct: 261 CPDYFDIIKHPMDLSTVQKKLNNGE---YETPSDFEADIRLIFNNCYTYNPVGTPVHEMG 317
Query: 195 KSLLEKFEEKWLQ 207
+ L F+EKWL
Sbjct: 318 RKLEAVFDEKWLH 330
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
AI RQ+ + K + PF PVD + DY +I+ PMD TI+ ++ G Y + +E
Sbjct: 71 AIVRQLKRTKDSIPFRAPVDPVKQNIPDYPTIIKHPMDLGTIEKRLTGHI---YNSAQEF 127
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D+RL+F N YN V VM K++ FE + QL
Sbjct: 128 IDDMRLMFSNCFTYNGTTSPVGVMGKNIETIFERQLKQL 166
>gi|326492620|dbj|BAJ90166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 540
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H W F PVD + G+ DY++VI PMD T+K K+ K Y + +
Sbjct: 87 ILGKLMDHPGGWLFHKPVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS---YLSTDDFA 143
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN + VH +A+ L F +W E K + QL M
Sbjct: 144 ADVRLTFSNAMTYNPPGNQVHTVAEQLNIMFNSEWTSY------ERKWIDRNLKPVQLPM 197
Query: 231 QLTQEAVQTN 240
++ + V N
Sbjct: 198 KVIKAHVAVN 207
>gi|326936108|ref|XP_003214100.1| PREDICTED: bromodomain-containing protein 2-like, partial
[Meleagris gallopavo]
Length = 601
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 53 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 110
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E D +F N YN DD+ +MA++L + F +K Q+ P
Sbjct: 111 -ENNYYWGAAECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQKVAQMPP 162
>gi|255580043|ref|XP_002530855.1| bromodomain-containing protein, putative [Ricinus communis]
gi|223529579|gb|EEF31529.1| bromodomain-containing protein, putative [Ricinus communis]
Length = 536
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 78 RHVASIEKQQQDAFHREEAAGRRM-QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLH 136
R ++I+++ + + R+M + + Q A++ + + H W F PVD + L +
Sbjct: 55 RERSAIKRRPTEMVEGQSKKKRKMDRSVIHQCASLVKSLMDHPCGWVFKEPVDPDKLHIP 114
Query: 137 DYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKS 196
DY+ +I PMD T+K+K++ Y E ADVRL F NA+ YN + VH MA+
Sbjct: 115 DYFSIITNPMDLGTVKSKLENNQ---YFESEEFAADVRLTFSNALLYNTPPNYVHNMAEK 171
Query: 197 LLEKFEEKWLQL 208
L + FE +W L
Sbjct: 172 LKKIFETRWKAL 183
>gi|363736907|ref|XP_003641771.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain testis-specific protein
[Gallus gallus]
Length = 995
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 6/111 (5%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
++Q L+R + + + +H ++WPF PVD L L DYY +I+KPMD STIK ++ +
Sbjct: 31 QLQYLQR---VVMKAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRL---E 84
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y E D + +F N YN DD+ MA+ L + F +K Q+ P
Sbjct: 85 HNYYTKSAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPP 135
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+A PF+ DV L + + + P D TIK KMD + YR+++E DVRL+F N
Sbjct: 302 YARPFLRSADVVSFSLGEKKGITKCPTDLGTIKKKMDNFE---YRDIQEFATDVRLMFMN 358
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K N +V MAK L + FE + ++
Sbjct: 359 CYKRNSPDHEVVAMAKKLQDVFETHFAKI 387
>gi|195429272|ref|XP_002062687.1| GK19581 [Drosophila willistoni]
gi|194158772|gb|EDW73673.1| GK19581 [Drosophila willistoni]
Length = 293
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 116 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
T K AW F PVD + LGL DY E++++PMDF TIK ++D D Y++ E DVRL
Sbjct: 30 TYKKLAWIFYEPVDPQTLGLDDYLEIVKEPMDFGTIKQRLDADD---YKDAMEFAKDVRL 86
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 229
+F NA Y + + MAK L FE+ + +LL E + ++E K + D
Sbjct: 87 IFFNAYLYTNSDHVCYKMAKELQLIFEKMFTELLNNSAELMEIADKEAVKVESD 140
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B [Heterocephalus
glaber]
Length = 2168
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1979 IAKASGQTIKIKKLH-----VKSKKTNESKKSKKVTLTGDTEDEDSASTSSSLKRGNKDL 2033
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2034 KKRKMEENTSINVSKQESFTSVKKPKRDDSKDLTLCSMILTEMETHEDAWPFLLPVNLKL 2093
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2094 V--PGYKKVIKKPMDFSTIREKLSNGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2148
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2149 AGHSMRKYFEKKW 2161
>gi|299472993|emb|CBN77394.1| Zinc finger, TAZ-type [Ectocarpus siliculosus]
Length = 1359
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
A+ ++ ++ W F PVD L L DY+E+I PMD T+ K+ + GY E
Sbjct: 420 GAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEE 479
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 221
ADV+LVF NAMKYN +V+ +A+ + ++F + W L ++ EE ++E
Sbjct: 480 FAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEENGRKE 532
>gi|425766265|gb|EKV04889.1| hypothetical protein PDIG_86900 [Penicillium digitatum PHI26]
gi|425778995|gb|EKV17090.1| hypothetical protein PDIP_32890 [Penicillium digitatum Pd1]
Length = 807
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 111/260 (42%), Gaps = 48/260 (18%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ W PF +PVD L + Y+ VI+KPMD ST ++K+ TG Y N +E DVRL
Sbjct: 474 HYSWVMPFYYPVDPVALNIPTYHSVIKKPMDLSTAQSKLK----TGQYENAKEFENDVRL 529
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ---------------------------- 207
+FKN ++N D + + E F KW Q
Sbjct: 530 IFKNCYRFNIPGDPTFICGQRAEEIFNAKWAQKSDYLEAHEPHPEQNTDSSDEDSDEDAE 589
Query: 208 ----------LLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLE 257
LL K + E RQ EA + + + K K ++ + ++
Sbjct: 590 ESEEDDEKLTLLQKQIAEMSRQ--VEAITNKKKKTPPSSKKVGKTKLVKKDSKKISSGKR 647
Query: 258 NLRETVIQ--KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLD 314
+ R + Q K R ++ EK+ + ++ L + + +AL+I+ N P T + E++LD
Sbjct: 648 DKRSKISQPGKTRAITYNEKQIISNGISSLPDKRMQQALQIIQNNVPQLKGTDEAEIELD 707
Query: 315 MDAQSELTLWRLKVFVQESL 334
+D L +L FV++ +
Sbjct: 708 IDELPNDVLLKLLNFVKKHV 727
>gi|320170819|gb|EFW47718.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1698
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+++PF+ PVDVEGLGL DYY+ I PMD ST++ +++ + Y ++ D+RL+F N
Sbjct: 313 FSFPFLEPVDVEGLGLVDYYDTITHPMDLSTLQTQLENGE---YTDLSTAVRDLRLIFAN 369
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 215
+YN +V MA L + E+K L LLP + E
Sbjct: 370 CYRYNGSDHEVSRMAHRLEQVLEQK-LALLPLALRE 404
>gi|18395937|ref|NP_566151.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
gi|75163747|sp|Q93ZB7.1|GTE11_ARATH RecName: Full=Transcription factor GTE11; AltName: Full=BROMODOMAIN
AND EXTRATERMINAL DOMAIN PROTEIN 10; Short=AtBET10;
AltName: Full=Bromodomain-containing protein GTE11;
AltName: Full=Protein GLOBAL TRANSCRIPTION FACTOR GROUP
E11
gi|16323117|gb|AAL15293.1| AT3g01770/F28J7_10 [Arabidopsis thaliana]
gi|20466526|gb|AAM20580.1| unknown protein [Arabidopsis thaliana]
gi|22136456|gb|AAM91306.1| unknown protein [Arabidopsis thaliana]
gi|332640191|gb|AEE73712.1| bromodomain and extraterminal domain protein 10 [Arabidopsis
thaliana]
Length = 620
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q ++ +++ + W F PVDV L + DY+ +I+ PMD T+K+K+ GT Y +
Sbjct: 131 KQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSS 187
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F+NAM YN ++V+ A +L + FE +W
Sbjct: 188 PSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>gi|440293863|gb|ELP86910.1| bromodomain containing protein, putative [Entamoeba invadens IP1]
Length = 358
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 66/116 (56%), Gaps = 4/116 (3%)
Query: 94 EEAAGRR-MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
E +GRR + I + + A PF+ PVD L DYY VI +PMD TI
Sbjct: 136 EHISGRRPLSHEVLPCKDILKTLKNLPEANPFLSPVDPIAQNLPDYYIVITEPMDLGTIT 195
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K+ + G Y ++ + ADVRL FKNAMKYN R+ VHV AK+LL+ F++K +L
Sbjct: 196 KKL--RMGV-YDHIDDFAADVRLTFKNAMKYNPPRNMVHVFAKTLLKYFDDKIKEL 248
>gi|350632424|gb|EHA20792.1| hypothetical protein ASPNIDRAFT_139507 [Aspergillus niger ATCC
1015]
Length = 531
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +A PF HPVD L + Y+ +I+KPMDFST+++K+ Y N +E D+RL+
Sbjct: 279 HYTYAMPFYHPVDPVALNIPTYHSIIKKPMDFSTVQSKLRAGQ---YENAKEFELDMRLI 335
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
KN K+N D ++ + L E+F +KW Q
Sbjct: 336 LKNCFKFNIPGDPTYMAGQRLEEEFNKKWAQ 366
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
+ +Q LKR + F + PVD L + Y + I++PMD TI+ K+
Sbjct: 104 SKSIQSLKRMHDSRF-----------YREPVDPIKLNVPHYPQFIKRPMDLGTIEKKL-- 150
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EE 216
YR + + D L+ +NA+ +N V + L F +K + LP+ E EE
Sbjct: 151 -KNNVYRTAQAVIDDFNLMVQNALTFNGPDHLVAQEGQKLKITF-DKQMANLPRADEVEE 208
Query: 217 KRQEEEEAKAQLDMQL 232
K+ ++ AK ++L
Sbjct: 209 KKPKKSVAKPSTAIRL 224
>gi|432110957|gb|ELK34430.1| Bromodomain testis-specific protein, partial [Myotis davidii]
Length = 842
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 11/117 (9%)
Query: 100 RMQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMD-----FSTI 151
++ E R + I +++ K +AWPF +PVDV LGLH+YY++++ PMD F
Sbjct: 222 KVTEPLRHCSEILKELFAKKHFSYAWPFYNPVDVNALGLHNYYDIVKNPMDLGNPEFLFT 281
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KMD ++ Y++ E ADVRL+F N +YN +V MA+ L + FE + ++
Sbjct: 282 ILKMDNQE---YKDAYEFAADVRLMFMNCYRYNPPDHEVVTMARMLQDVFEMHFAKI 335
>gi|194763657|ref|XP_001963949.1| GF20989 [Drosophila ananassae]
gi|190618874|gb|EDV34398.1| GF20989 [Drosophila ananassae]
Length = 907
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q E GR +L+ + + I +H ++WPF PVD + L L DY+++I+ PM
Sbjct: 22 QPPVVPPAERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKHPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKEAIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPKVMEEEKRQEEEEAKA 226
+L+PK EE E AK
Sbjct: 138 ELMPK---EELELEPVTAKG 154
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1989 IAKASGQTIKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2043
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + ASI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2044 KKRKMEENASINLSKQESFSSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2103
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2104 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2158
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2159 AGHNMRKYFEKKW 2171
>gi|295669172|ref|XP_002795134.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285068|gb|EEH40634.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 910
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 563 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLIFKN 618
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D KS+ E F+ KW Q
Sbjct: 619 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 646
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +Q LKR A F F PVD L + +Y +I+ PMD T+++K+ K
Sbjct: 349 RCLQGLKRLHDARF-----------FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--K 395
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
G+ Y +V + AD L+ +N++ +N V + ++L + F E+ L LPK
Sbjct: 396 QGS-YASVDAVIADFNLMIENSVTFNGADHVVSMEGRNLKQNF-ERHLSKLPKA 447
>gi|225682582|gb|EEH20866.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 908
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 561 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLIFKN 616
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D KS+ E F+ KW Q
Sbjct: 617 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 644
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +Q LKR A F F PVD L + +Y +I+ PMD T+++K+ K
Sbjct: 347 RCLQGLKRLHDARF-----------FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--K 393
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
G+ Y +V + AD L+ +N++ +N V + ++L + F E+ L LPK E E
Sbjct: 394 QGS-YASVDAVIADFNLMIENSVTFNGADHVVSMEGRNLKQNF-ERHLSKLPKADEVEVT 451
Query: 219 QEEEEAK 225
E++AK
Sbjct: 452 PAEKKAK 458
>gi|195167198|ref|XP_002024421.1| GL14811 [Drosophila persimilis]
gi|194107794|gb|EDW29837.1| GL14811 [Drosophila persimilis]
Length = 678
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + I +H +AWPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 33 GRNTNQLQFLIKTVMKMIWKHHFAWPFQQPVDAKKLNLPDYHKIIKQPMDMGTIKKRLEN 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEK 217
Y + +E D +F N YN +DV VMA++L + F +K ++ +PK EE
Sbjct: 93 NY---YWSAKETIHDFNTMFNNCYVYNKPGEDVVVMAQTLEKVFLQK-IETMPK---EEL 145
Query: 218 RQEEEEAKA 226
E AK
Sbjct: 146 ELEPATAKG 154
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1987 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2041
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2042 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2101
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ G Y N+ DVRLVF N +N++ D+
Sbjct: 2102 V--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2156
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2157 AGHNMRKYFEKKW 2169
>gi|6016737|gb|AAF01563.1|AC009325_33 hypothetical protein [Arabidopsis thaliana]
gi|6091741|gb|AAF03453.1|AC010797_29 hypothetical protein [Arabidopsis thaliana]
Length = 601
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q ++ +++ + W F PVDV L + DY+ +I+ PMD T+K+K+ GT Y +
Sbjct: 131 KQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSS 187
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F+NAM YN ++V+ A +L + FE +W
Sbjct: 188 PSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 227
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
paniscus]
Length = 2168
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1979 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2033
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2034 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2093
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ G Y N+ DVRLVF N +N++ D+
Sbjct: 2094 V--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2148
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2149 AGHNMRKYFEKKW 2161
>gi|325089952|gb|EGC43262.1| transcription regulator BDF1 [Ajellomyces capsulatus H88]
Length = 845
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 501 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLIFKN 556
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + KSL E F+ KW Q
Sbjct: 557 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 584
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +Q LKR + F F PVD L + +Y +I++PMD TI+ K+ K
Sbjct: 288 RCIQGLKRVHDSRF-----------FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--K 334
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
G+ Y ++ + +D L+ N++ +N V + +L + F E+ L LP E E
Sbjct: 335 AGS-YTSLFAVTSDFDLMVDNSVTFNGPEHVVSMEGANLKQSF-ERHLAKLPGPDEVETS 392
Query: 219 QEEEEAK 225
+++A+
Sbjct: 393 PAQKKAQ 399
>gi|17551634|ref|NP_508124.1| Protein F13C5.2 [Caenorhabditis elegans]
gi|351061577|emb|CCD69431.1| Protein F13C5.2 [Caenorhabditis elegans]
Length = 374
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 103 ELKRQFAAI--FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
ELK+ + + F + T + +PF PVDV LGL DY+EVI+KPMD STI+ K+ G++
Sbjct: 118 ELKKCLSILKEFEKSTHDSFTFPFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEE- 176
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y E D +L+ N + YN+E D V A +KF KW + P
Sbjct: 177 --YDTAVEFKEDFKLMINNCLTYNNEGDPVADFALQFRKKFAAKWKKEFP 224
>gi|327350418|gb|EGE79275.1| transcription regulator BDF1 [Ajellomyces dermatitidis ATCC 18188]
Length = 943
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF +PVD L + Y+ +I+KPMD T++ ++ TG Y N +E+ AD+RL+FKN
Sbjct: 599 ALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQ----TGQYENAKEMEADIRLIFKN 654
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + KSL E F+ KW Q
Sbjct: 655 CYKFNIPGDPTYNAGKSLEEVFDNKWSQ 682
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + +Y +I++PMD TI+ K+ K G+ Y ++ + +D L+ N++ +
Sbjct: 400 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--KSGS-YASLAAVISDFDLMIDNSVTF 456
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
N V V L + F E+ L LP E E +++AK
Sbjct: 457 NGPEHMVSVEGLRLKQNF-ERHLAKLPGPDEVETSPAQKKAK 497
>gi|313232668|emb|CBY19338.1| unnamed protein product [Oikopleura dioica]
Length = 814
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +H+ +WPF PVD L L DYYEV++KPMD STIK K D Y + E
Sbjct: 24 ILVKVQKHQHSWPFQKPVDPVALALPDYYEVVKKPMDLSTIKKKF---DTYQYNSGAEAL 80
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
+D ++F N YN DDV +M +++ F++
Sbjct: 81 SDFEVMFSNCYLYNKPTDDVTLMCQAVESAFKD 113
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 108 FAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNV 166
FA ++ + ++ F PVD + L L DY ++I PMD T++ K+ DGK Y +
Sbjct: 234 FAPEYQSV-----SYLFYEPVDYKKLKLPDYPKIITHPMDMGTVRQKLVDGK----YSDP 284
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E+ D+ L+F N +YN + V AK L F + W
Sbjct: 285 MEVQKDMELMFHNCYRYNPPSNSVVKAAKKLDTIFHKIW 323
>gi|299116970|emb|CBN75074.1| hypothetical protein Esi_0066_0081 [Ectocarpus siliculosus]
Length = 1147
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
W F PVD GL L +Y +I++PMD T+K+K++ + Y+N E +VRLVF NA
Sbjct: 717 W-FNEPVDYVGLNLPEYTTIIKRPMDLGTVKSKLESGE---YKNTVEFAHEVRLVFSNAC 772
Query: 182 KYN-DERDDVHVMAKSLLEKFEEKWLQLLPKV 212
YN DE DVH+ A+ LL F+ K +L P +
Sbjct: 773 HYNSDETSDVHIAARHLLHVFDAKMEELGPGL 804
>gi|261199936|ref|XP_002626369.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239594577|gb|EEQ77158.1| transcription regulator BDF1 [Ajellomyces dermatitidis SLH14081]
gi|239607966|gb|EEQ84953.1| transcription regulator BDF1 [Ajellomyces dermatitidis ER-3]
Length = 898
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF +PVD L + Y+ +I+KPMD T++ ++ TG Y N +E+ AD+RL+FKN
Sbjct: 550 ALPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTRLQ----TGQYENAKEMEADIRLIFKN 605
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + KSL E F+ KW Q
Sbjct: 606 CYKFNIPGDPTYNAGKSLEEVFDNKWSQ 633
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + +Y +I++PMD TI+ K+ K G+ Y ++ + +D L+ N++ +
Sbjct: 351 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--KSGS-YASLAAVISDFDLMIDNSVTF 407
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
N V V L + F E+ L LP E E +++AK
Sbjct: 408 NGPEHMVSVEGLRLKQNF-ERHLAKLPGPDEVETSPAQKKAK 448
>gi|320170046|gb|EFW46945.1| E1A binding protein p300 [Capsaspora owczarzaki ATCC 30864]
Length = 2072
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD-GKD 159
++ ++ F IF ++ + + A PFM PVD LG+ DY VI++PMDFSTI+ ++D D
Sbjct: 885 VKTMREVFLPIFEELCRDENAGPFMVPVDPVALGILDYLTVIKRPMDFSTIRTRLDRPTD 944
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
YR+ D+RLVF NA+ YN + VH MA L + FE +
Sbjct: 945 KHFYRDPLGFVDDMRLVFTNALTYNKKNSRVHKMATKLSDLFENR 989
>gi|195063016|ref|XP_001996299.1| GH22418 [Drosophila grimshawi]
gi|193899794|gb|EDV98660.1| GH22418 [Drosophila grimshawi]
Length = 309
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q R + GR +L+ + + + H +A+PF PV+ + L L DY+++I++PM
Sbjct: 12 QPPTVQRLDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPM 71
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D +TIK ++ + Y + E AD+ L+F N YN +DV +MAK L E +L
Sbjct: 72 DLATIKKRL---ANSYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFL 124
Query: 207 QLLPKVMEEE 216
Q + + +EE
Sbjct: 125 QAIKDMPKEE 134
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + +SI QQ++F + R + + I
Sbjct: 2013 TEDEDSASTSSSLKRGVKDLKKRKMEENSSINVPQQESFTSVKKPKREDSKDLALCSMIL 2072
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ D
Sbjct: 2073 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALD 2127
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2128 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|195063000|ref|XP_001996295.1| GH22416 [Drosophila grimshawi]
gi|193899790|gb|EDV98656.1| GH22416 [Drosophila grimshawi]
Length = 291
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q R + GR +L+ + + + H +A+PF PV+ + L L DY+++I++PM
Sbjct: 12 QPPTVQRLDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPM 71
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D +TIK ++ Y + E AD+ L+F N YN +DV +MAK L E +L
Sbjct: 72 DLATIKKRLANNY---YWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFL 124
Query: 207 QLLPKVMEEE 216
Q + + +EE
Sbjct: 125 QAIKDMPKEE 134
>gi|195062991|ref|XP_001996293.1| GH22415 [Drosophila grimshawi]
gi|193899788|gb|EDV98654.1| GH22415 [Drosophila grimshawi]
Length = 309
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q R + GR +L+ + + + H +A+PF PV+ + L L DY+++I++PM
Sbjct: 12 QPPTVQRLDRPGRHTNQLEYILKTVMKSLWNHHYAYPFQQPVNAKKLKLPDYHDIIKQPM 71
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D +TIK ++ + Y + E AD+ L+F N YN +DV +MAK L E +L
Sbjct: 72 DLATIKKRL---ANSYYWSATEAAADINLIFTNCSLYNKPTEDVIIMAKVL----ESVFL 124
Query: 207 QLLPKVMEEE 216
Q + + +EE
Sbjct: 125 QAIKDMPKEE 134
>gi|301118949|ref|XP_002907202.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105714|gb|EEY63766.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 786
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+I + + + A PFM PVD LG+ DY+ VI++PMD TI+N ++ +G+ +
Sbjct: 282 SILKGLMANPKAAPFMAPVDPVALGIPDYFHVIKEPMDLGTIRNNLE----SGFYDSPSD 337
Query: 170 YAD-VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+A+ VRL F+NA YN VH+ A+ L++ FE+++
Sbjct: 338 FAEHVRLTFRNATLYNAAHSQVHIYARKLVDDFEKRF 374
>gi|358055176|dbj|GAA98945.1| hypothetical protein E5Q_05633 [Mixia osmundae IAM 14324]
Length = 754
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 59/263 (22%)
Query: 111 IFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN-V 166
I R + +H+++ +PF+ PVD + L + DY V++ PMD T+K ++D GY N
Sbjct: 445 IIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDA----GYYNHA 500
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 226
E AD RLV +N K+N VH M + L FE +W + R E EE +
Sbjct: 501 SEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRD------KPASRPETEEPDS 554
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQ--LENLRETVIQKCRK--------------- 269
E+ ++K L E D+Q L L+E +K +
Sbjct: 555 DY------ESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYS 608
Query: 270 ---------------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT- 307
++ E K+ L +T L +A++I+ P
Sbjct: 609 KSGKPKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDE 668
Query: 308 AQEVDLDMDAQSELTLWRLKVFV 330
++E++LD+DA TL +L FV
Sbjct: 669 SKEIELDIDALDPQTLLKLYQFV 691
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
G + + + +F A R + +++ A F +PVD LG+ Y+ I PMD ST++ +
Sbjct: 216 GGPLPQAQHKFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLI 275
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
+ Y +V E ++V+LVF N +N E + +MA+ L F + L+ P +
Sbjct: 276 ANE---YASVEEFRSEVKLVFDNCCAFNREESPIGLMARRLEGAFNKTMLKCPPAL 328
>gi|412988890|emb|CCO15481.1| bromodomain-containing protein [Bathycoccus prasinos]
Length = 947
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + ++K+ W F PVD LG+ DYYE+++ PMD +K K+DGK Y +
Sbjct: 332 VLNHVKRNKFHWIFTQPVDAVKLGIPDYYEIVKNPMDLGKVKEKLDGKK---YTWPTDFA 388
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
D+RL+F N YN D M +++ FEE W+ K E+K +EE+ + + D+
Sbjct: 389 DDMRLIFDNCALYNGTTTDAGQMGETVRGAFEEGWV----KYNVEQKMSDEEDIRTKEDI 444
Query: 231 QLT 233
++
Sbjct: 445 EIA 447
>gi|358055177|dbj|GAA98946.1| hypothetical protein E5Q_05634 [Mixia osmundae IAM 14324]
Length = 750
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 59/263 (22%)
Query: 111 IFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN-V 166
I R + +H+++ +PF+ PVD + L + DY V++ PMD T+K ++D GY N
Sbjct: 441 IIRDVQKHRYSEFTYPFLAPVDWQALNIPDYPNVVQHPMDLGTMKRRLDA----GYYNHA 496
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 226
E AD RLV +N K+N VH M + L FE +W + R E EE +
Sbjct: 497 SEFEADFRLVIENCYKFNPVETPVHQMGRKLEAFFENRWRD------KPASRPETEEPDS 550
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQ--LENLRETVIQKCRK--------------- 269
E+ ++K L E D+Q L L+E +K +
Sbjct: 551 DY------ESDPEKRSKILAIERQIADLQNTLAELKEPAKKKAKSSRPSYGSTKKSKSYS 604
Query: 270 ---------------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT- 307
++ E K+ L +T L +A++I+ P
Sbjct: 605 KSGKPKTGQKGKASDGDDDGGITFEMKRELANKITTFEGAKLEQAIDIIRSAEPHLLGDE 664
Query: 308 AQEVDLDMDAQSELTLWRLKVFV 330
++E++LD+DA TL +L FV
Sbjct: 665 SKEIELDIDALDPQTLLKLYQFV 687
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
G + + + +F A R + +++ A F +PVD LG+ Y+ I PMD ST++ +
Sbjct: 212 GGPLPQAQHKFCLATVRNLKRNREAPAFCNPVDPIVLGIPAYFAYIRNPMDLSTVEKHLI 271
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
+ Y +V E ++V+LVF N +N E + +MA+ L F + L+ P +
Sbjct: 272 ANE---YASVEEFRSEVKLVFDNCCAFNREESPIGLMARRLEGAFNKTMLKCPPAL 324
>gi|70993850|ref|XP_751772.1| transcription regulator BDF1 [Aspergillus fumigatus Af293]
gi|66849406|gb|EAL89734.1| transcription regulator BDF1, putative [Aspergillus fumigatus
Af293]
Length = 832
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 493 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDMRQ 548
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D ++ + E FE KW Q
Sbjct: 549 IFKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 580
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+ +Q LKR A F + PVD + + Y ++I+ PMD TI+ K+
Sbjct: 290 KGIQSLKRMNDARF-----------YREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNN 338
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
+ Y+ + + D L+ +NA+ +N V L FE++ + LPK E E++
Sbjct: 339 E---YKTAQAVVDDFNLMVQNAVTFNGPDHLVSQEGLKLKGTFEKQMMN-LPKADEVEEK 394
Query: 219 Q 219
+
Sbjct: 395 K 395
>gi|159125309|gb|EDP50426.1| transcription regulator BDF1, putative [Aspergillus fumigatus
A1163]
Length = 832
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 493 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDMRQ 548
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D ++ + E FE KW Q
Sbjct: 549 IFKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 580
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+ +Q LKR A F + PVD + + Y ++I+ PMD TI+ K+
Sbjct: 290 KGIQSLKRMNDARF-----------YREPVDPIKMNIPHYPQIIKHPMDLGTIERKLKNN 338
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEK 217
+ Y+ + + D L+ +NA+ +N V L FE++ + LPK E EEK
Sbjct: 339 E---YKTAQAVVDDFNLMVQNAVTFNGPDHLVSQEGLKLKGTFEKQMMN-LPKADEVEEK 394
Query: 218 RQEEEEAKAQLDMQLTQEAVQTNKAK 243
+ ++ K + + ++ T+ A+
Sbjct: 395 KPKKVSTKTSAAHREPRTSIGTSTAR 420
>gi|226289996|gb|EEH45480.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 908
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF HPVD L + Y+ VI+KPMD T++ K+ TG Y N +E+ AD+RL+FKN
Sbjct: 561 AAPFYHPVDPVALNIPTYHSVIKKPMDLQTVQTKLR----TGQYENAKEMEADIRLMFKN 616
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D KS+ E F+ KW Q
Sbjct: 617 CYKFNIPGDPTFNAGKSMEELFDNKWSQ 644
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +Q LKR A F F PVD L + +Y +I+ PMD T+++K+ K
Sbjct: 347 RCLQGLKRLHDARF-----------FREPVDAVKLNIPNYPLIIKNPMDLRTMEDKL--K 393
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
G+ Y +V + AD L+ +N++ +N V + ++L + F E+ L LPK E E
Sbjct: 394 QGS-YASVDAVIADFNLMIENSVTFNGADHVVSMEGRNLKQNF-ERHLSKLPKADEVEVT 451
Query: 219 QEEEEAK 225
E++AK
Sbjct: 452 PAEKKAK 458
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G TV+++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1981 IAKASGQTVKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2035
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2036 KKRKMEENTSINLSKQESFSSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2095
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2096 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2150
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2151 AGHNMRKYFEKKW 2163
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++ + L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1946 IAKASGQTLKFKKLH-----VKGKKTNDSKKGKKVALTGDTEDEDSASTSSSLKRGNKDL 2000
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2001 KKRKIEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2060
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2061 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLESFALDVRLVFDNCETFNEDDSDIGR 2115
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2116 AGHSMRKYFEKKW 2128
>gi|326434901|gb|EGD80471.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
Length = 905
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++E ++ + +F + ++AWPF PV + LGL DY + ++ PMD T+K +++
Sbjct: 342 LRECRKIISELFSK-KHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGH- 399
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
Y +V ADVRLVF N KYN D V MA L FE
Sbjct: 400 --YSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
W F PVD + L + DY +I++PMD T+ K+ + Y + +E D+ L+ N
Sbjct: 201 W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKLKERT---YTSAQECIDDIHLMLNNCF 256
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
YN + VH+ A+ L F E+ L LP+
Sbjct: 257 VYNPATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|119500410|ref|XP_001266962.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
gi|119415127|gb|EAW25065.1| transcription regulator BDF1, putative [Neosartorya fischeri NRRL
181]
Length = 833
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ WA PF PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 494 HYNWAAPFYFPVDPVALNIPTYHSIIKKPMDLSTVQSKLK----TGQYENAKEFEVDMRQ 549
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D ++ + E FE KW Q
Sbjct: 550 IFKNCFKFNIPGDPTYMAGQRFQEIFENKWAQ 581
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+Q LKR A F + PVD + + Y ++I+ PMD TI+ K+
Sbjct: 293 IQSLKRMNDARF-----------YREPVDPVKMNIPHYPQIIKHPMDLGTIERKL---KN 338
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQ 219
T Y+ + + D L+ +NA+ +N V L FE++ + LPK E EEK+
Sbjct: 339 TEYKTAQAVVDDFNLMVQNAVTFNGPDHVVSQEGLKLKGTFEKQMMN-LPKADEVEEKKP 397
Query: 220 EEEEAKAQLDMQLTQEAVQTNKAK 243
++ K + + ++ T+ A+
Sbjct: 398 KKVSTKTSAAHREPRTSIGTSTAR 421
>gi|167395679|ref|XP_001741703.1| bromodomain-containing protein [Entamoeba dispar SAW760]
gi|165893699|gb|EDR21839.1| bromodomain-containing protein, putative [Entamoeba dispar SAW760]
Length = 481
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I Q+ A PF+ PVD L DYY VI PMD STI K + G Y ++ +
Sbjct: 274 ILNQLKLLPEANPFLTPVDPIAQNLPDYYVVIRHPMDLSTITKKF--RYGI-YEHIDDFA 330
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
DVRLVFKNAMKYN R+ +H+ A +LL F+++
Sbjct: 331 NDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ 364
>gi|357144539|ref|XP_003573328.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 777
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ R + +H++ F PVD L + DY+++++ PMD TI+ K++ Y E
Sbjct: 163 LLRNLMRHRYGQTFSIPVDPVKLNIPDYFDIVKHPMDLGTIQKKLNS---GSYPTPWEFA 219
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL---LPKVMEE 215
ADVRL F NA+ YN + VH MAK++ FE +W + LP+ EE
Sbjct: 220 ADVRLTFSNAILYNPHNNVVHQMAKTMSSHFEPRWKPIEKKLPRPEEE 267
>gi|291243780|ref|XP_002741778.1| PREDICTED: bromodomain containing 2-like [Saccoglossus kowalevskii]
Length = 821
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PV+ LGL DY+++I+ PMD TIK +++
Sbjct: 96 GRQTNQLQYLRNVVMKAVWKHQFAWPFHAPVNPAELGLPDYFDIIKNPMDLGTIKKRLES 155
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + ++ +D L+F N YN +DV +MA++L + F K Q+
Sbjct: 156 N---YYYSAKDCISDFNLMFTNCYLYNKPGEDVVLMAQALEKLFLTKVAQM 203
>gi|224057449|ref|XP_002190567.1| PREDICTED: bromodomain testis-specific protein [Taeniopygia
guttata]
Length = 680
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
++Q L+R + R + +H ++WPF PVD L L DYY +I+KPMD TIK ++ +
Sbjct: 31 QLQYLQR---VVMRAMWRHNFSWPFHQPVDAAALNLPDYYTIIKKPMDLGTIKKRL---E 84
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y E D + +F N YN DD+ MA+ L + F +K ++ P
Sbjct: 85 HNYYTKAAECIEDFKTMFWNCYMYNKSGDDIVFMAEELEKVFMQKIARMPP 135
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 110 AIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
AI +++ K +AWPF+ P DV + + P D TIK KMD + Y ++
Sbjct: 290 AILKELFSKKHAAYAWPFIKPEDVASASTGANQAIAKYPTDLGTIKKKMDNFE---YNDI 346
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+E DVRL+F + K N ++ MA+ L + FE
Sbjct: 347 QEFATDVRLMFMSCYKRNSSDHEIVAMARKLQDVFE 382
>gi|326434902|gb|EGD80472.1| hypothetical protein PTSG_13143 [Salpingoeca sp. ATCC 50818]
Length = 1105
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
++E ++ + +F + ++AWPF PV + LGL DY + ++ PMD T+K +++
Sbjct: 342 LRECRKIISELFSK-KHAEYAWPFYEPVKADELGLSDYRDFVDTPMDLGTVKKRIESGH- 399
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
Y +V ADVRLVF N KYN D V MA L FE
Sbjct: 400 --YSDVDSFIADVRLVFSNCYKYNPSTDPVFGMATKLHNVFE 439
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
W F PVD + L + DY +I++PMD T+ K+ K+ T Y + +E D+ L+ N
Sbjct: 201 W-FAQPVDWKALNIPDYPTIIKQPMDLGTVSKKL--KERT-YTSAQECIDDIHLMLNNCF 256
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
YN + VH+ A+ L F E+ L LP+
Sbjct: 257 VYNPATNPVHIKARELETAF-ERCLHRLPQ 285
>gi|120431733|ref|NP_001073342.1| bromodomain testis-specific protein isoform B [Mus musculus]
Length = 326
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 24 SGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLE 83
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 84 NK---YYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
+AWPF +PVD + LGLH+YY+V++ PMD TIK
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|297828570|ref|XP_002882167.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
gi|297328007|gb|EFH58426.1| ATBET10 [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q + +++ + W F PVD+ L + DY+ +I+ PMD T+K+K+ GT Y +
Sbjct: 128 KQCETLLKRLMSQQHCWLFNTPVDMVKLNIPDYFTIIKHPMDLGTVKSKL--TSGT-YSS 184
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E ADVRL F+NAM YN ++V+ A +L + FE +W
Sbjct: 185 PSEFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRW 224
>gi|62086391|dbj|BAD91553.1| bromodomain-containing protein [Mus musculus]
Length = 326
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 24 SGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLE 83
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 84 NK---YYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 132
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
+AWPF +PVD + LGLH+YY+V++ PMD TIK
Sbjct: 290 YAWPFYNPVDADALGLHNYYDVVKNPMDLGTIK 322
>gi|448081188|ref|XP_004194827.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359376249|emb|CCE86831.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 645
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K+++AA R Q + +++PF+ PVD L + +Y+E+I++PMD ST+++K
Sbjct: 313 KKKYAAELRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSK 372
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ Y N E DVRL+FKN +N E DV++M L F++KW
Sbjct: 373 LANNQ---YENGDEFERDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 420
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 101 MQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
M + + +FA + I + + A PF+HPVD L + YY I++PMD STI+ K+
Sbjct: 152 MPKHQGKFAQTTIKAIKRLRDAGPFLHPVDTVKLNVPFYYNYIKRPMDLSTIERKL---A 208
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
Y + ++ D L+ N +K+N E + MAK+ FE+ L + PKV+
Sbjct: 209 VNAYEDPSQVVDDFNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNMPPKVL 262
>gi|378734234|gb|EHY60693.1| bromodomain-containing protein [Exophiala dermatitidis NIH/UT8656]
Length = 968
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 9/112 (8%)
Query: 99 RRMQELKRQFA-AIFRQITQHKWAWP----FMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
++ EL+ +F + +++T K+ WP F HPVD L + Y+++I+KPMD TI+
Sbjct: 602 KKKYELQLKFCDEVLKELTATKY-WPINQYFTHPVDPVALNIPTYFQIIKKPMDLGTIRT 660
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K++ Y ++ DVRLVFKN K+N E D V+ L E F +KW
Sbjct: 661 KLNNN---VYEKAKDFEEDVRLVFKNCYKFNPEGDLVNSAGHQLEELFNKKW 709
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + Y+EVI+ PMD TI ++ + Y +V +D L+ N +K+
Sbjct: 425 FRLPVDPVALNIPTYFEVIKHPMDLGTIDQRLKRNE---YTSVAAFISDFELIVDNCVKF 481
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 233
N V A+ + F + ++ LPK EE ++ ++A +L+ T
Sbjct: 482 NGPDHGVTQAARKMQSSFNSQ-MRNLPKASIEEPPKDNKKAAKKLEPTRT 530
>gi|384486789|gb|EIE78969.1| hypothetical protein RO3G_03674 [Rhizopus delemar RA 99-880]
Length = 489
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 131/275 (47%), Gaps = 49/275 (17%)
Query: 96 AAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
A+ + M+ + + +Q +H ++PF++PVD L + DY +++ PMD STI+ K+
Sbjct: 184 ASSKVMKYCLQTVKELKKQKYKH-LSFPFLYPVDPVALNIPDYPTIVKHPMDLSTIETKL 242
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 215
+ + Y + AD++L+F N YN ++ +AK L F+EKW Q +V+EE
Sbjct: 243 NRNE---YDSPDAFAADIKLMFDNCYLYNPPHLPIYDLAKQLQAIFDEKWAQRPTEVIEE 299
Query: 216 EKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENL---------------- 259
+ ++ +K + QE V EL + + Q+E++
Sbjct: 300 QPAKKRRISKVN---RANQEDVTI---AELERHIATISQQIESIKSSSSKKSPKKRTTRP 353
Query: 260 ----RET---------VIQKCRKMST---------EEKKNLGTALTRLSPEDLCKALEIV 297
+ET + K R+MS+ E+K+ L ++ L+ + L + ++I+
Sbjct: 354 SPAKKETGTPPKKKKKRMTKYREMSSDEEDSGFTFEQKRQLSESINNLTGDQLNEVVDII 413
Query: 298 AENNPSFHATA-QEVDLDMDAQSELTLWRLKVFVQ 331
+ P+ + +E++LD+D+ TL RL +V+
Sbjct: 414 RSSMPNLDSVGEEEIELDIDSLDINTLTRLNDYVK 448
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
Query: 96 AAGRRMQELKRQF-AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
GR M + + ++ AAI R + +H+ A PF++PVD L + DY +VI++P+D + I K
Sbjct: 28 TGGRPMTKDQMKYCAAIMRNLKKHRDAAPFLNPVDYIKLNVPDYPQVIKRPIDLTLIDQK 87
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 214
++ + Y V + ADVRLVF N KYN + V+ +++ FE+ Q+ P + E
Sbjct: 88 LNQNE---YVTVDDFVADVRLVFNNCFKYNGPEAMISVLCQNVESAFEKGLRQMPPSLDE 144
>gi|384499194|gb|EIE89685.1| hypothetical protein RO3G_14396 [Rhizopus delemar RA 99-880]
Length = 446
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 122 WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAM 181
+PF+HPVDV L + DY ++I+ PMD STI+ K++ DG Y ++ D++L+F N
Sbjct: 195 YPFLHPVDVVALNIPDYVDIIKHPMDLSTIEKKLN--DGE-YVEPKDFEEDIKLMFNNCY 251
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLLPKV--MEEEKRQEEEEAKAQLDMQLTQEAVQT 239
YN +H M + L + F+EKW Q PK + EEE L+ + + +
Sbjct: 252 LYNPPSLPIHKMGRQLEKVFDEKWAQKPPKTEPVPLVDDAPEEEFDEVLEQRNDSDDERD 311
Query: 240 NKAKELRSELNEVDMQLENL----RETVIQKCRKMSTEEKKNLGTA 281
K EL + + Q+ ++ R+ +K R+ ST+ K T+
Sbjct: 312 QKIAELERHIATISQQIASIKSQKRKKPTEKSRRASTKSTKEKKTS 357
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 3/110 (2%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
AI R + +H+ A PF+ PVD L + DY ++I PMD +T+ K+ + Y +V +
Sbjct: 10 GAIMRNLKKHRDATPFLQPVDYIQLNIPDYPKIIHHPMDLATVDKKL---NSGQYSSVDQ 66
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
DVRLVF N K+N + ++ +++ FE+ Q+ P E R
Sbjct: 67 WICDVRLVFNNCFKFNGPEATISMLCQNVESAFEKSLRQMPPSKTSEPSR 116
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 2014 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2068
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2069 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2128
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2129 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2183
Query: 193 MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLT 233
++ + FE+KW + E+ + A QLT
Sbjct: 2184 AGHNMRKYFEKKWTDTFKPLCYEDALAAQPYGAANSYHQLT 2224
>gi|448085671|ref|XP_004195918.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
gi|359377340|emb|CCE85723.1| Piso0_005345 [Millerozyma farinosa CBS 7064]
Length = 637
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K+++AA R Q + +++PF+ PVD L + +Y+E+I++PMD ST+++K
Sbjct: 305 KKKYAAELRFCNQTLKELTSKKHYSYSFPFLTPVDAVALNIPNYHEIIKEPMDLSTVQSK 364
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ Y N E DVRL+FKN +N E DV++M L F++KW
Sbjct: 365 LANNQ---YENGDEFEHDVRLIFKNCYTFNPEGTDVNMMGHRLESVFDKKW 412
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Query: 101 MQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
M + + +FA + I + + A PF+HPVD L + YY I++PMD STI+ K+
Sbjct: 144 MPKHQGKFAQTTIKAIKRLRDAGPFLHPVDTVKLNVPLYYNYIKRPMDLSTIERKI---A 200
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
Y + ++ D L+ N +K+N E + MAK+ FE+ L + PKV+
Sbjct: 201 VNAYEDPSQVVDDFNLMVSNCIKFNGENSGISKMAKNTQAHFEKHMLNIPPKVL 254
>gi|366999172|ref|XP_003684322.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
gi|357522618|emb|CCE61888.1| hypothetical protein TPHA_0B02160 [Tetrapisispora phaffii CBS 4417]
Length = 690
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 55/282 (19%)
Query: 94 EEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
E+ +++Q+ R I +++T K+A +PF+ PVD + + Y++ ++ PMD ST
Sbjct: 314 EKPKSKKLQQAMRFCQGIVKELTSKKYASFNYPFLEPVDPVAMNIPTYFDYVKDPMDLST 373
Query: 151 IKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ K++ + Y+++ E +DV+LVF N +N + V++M L E F KW+
Sbjct: 374 VTKKLNNWE---YKSLEEFESDVKLVFHNCYAFNPDGTIVNMMGHRLEEIFNAKWVDR-- 428
Query: 211 KVMEEEKRQEE---EEAKA------QLDMQLTQEAVQTNKA-KELRSELNEVDMQLENLR 260
+ E+ EE EE A + E+ TN A + + +L + ++L+ L+
Sbjct: 429 PIFEDYDTDEEIEREEYSASDVEDSEESESEIDESSITNPAIQYIEEQLARMKVELQQLK 488
Query: 261 ETVIQKCRK------------------------------------MSTEEKKNLGTALTR 284
+ + K RK ++ E KK + +
Sbjct: 489 KQELDKIRKERRLARGTKKPRGKRGRNKSRGSSGSRSGKKKFKTVVTYEMKKIITEKIND 548
Query: 285 LSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRL 326
LSP L KA+ I+ ++ P EV+LD+D S TL L
Sbjct: 549 LSPSKLEKAVNIIKKSMPDL-GEDDEVELDLDTLSNSTLLTL 589
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + + K A PF+ PVD L + YY I++PMD TI+ K+ Y + +I
Sbjct: 169 IKAVKRLKDAKPFLLPVDPVALNIPHYYNKIQRPMDLMTIEKKLTVD---AYDSPEKITE 225
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEA 224
D L+ +N + +N + MA+++ +E+ L + K + + KR+++E+A
Sbjct: 226 DFNLMVQNCIVFNGPTSGIAQMARNIQAAYEKHMLNMPSKDSEPLKQTRKRKQDEDA 282
>gi|67483926|ref|XP_657183.1| bromodomain protein [Entamoeba histolytica HM-1:IMSS]
gi|56474427|gb|EAL51797.1| bromodomain protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704936|gb|EMD45090.1| bromo domain containing protein [Entamoeba histolytica KU27]
Length = 485
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 113 RQITQH----KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
RQI H A PF+ PVD L DYY VI PMD +TI K + G Y ++ +
Sbjct: 276 RQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKF--RYGI-YEHIDD 332
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
DVRLVFKNAMKYN R+ +H+ A +LL F+++
Sbjct: 333 FANDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|407044057|gb|EKE42339.1| bromodomain containing protein [Entamoeba nuttalli P19]
Length = 485
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 56/96 (58%), Gaps = 7/96 (7%)
Query: 113 RQITQH----KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
RQI H A PF+ PVD L DYY VI PMD +TI K + G Y ++ +
Sbjct: 276 RQILNHLKLLPEASPFLTPVDPIAQNLPDYYVVITHPMDLNTITKKF--RYGI-YEHIDD 332
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
DVRLVFKNAMKYN R+ +H+ A +LL F+++
Sbjct: 333 FANDVRLVFKNAMKYNPPRNTIHIFASTLLRYFDDQ 368
>gi|260943750|ref|XP_002616173.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
gi|238849822|gb|EEQ39286.1| hypothetical protein CLUG_03414 [Clavispora lusitaniae ATCC 42720]
Length = 613
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 22/158 (13%)
Query: 67 SISIAKEKLKDRHVASIEKQQQDAFHREEAA--GRRMQEL-------KRQFAAIFRQITQ 117
+ S+A ++ R+V +K++ A HR + R +EL K+++A R Q
Sbjct: 230 AASVANANVRRRNVVGDDKKESVAAHRPKRTIHPPRSKELPYDVRPRKKKYAVELRFCNQ 289
Query: 118 ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
+ +PF+ PVD L + +Y++++++PMD +I+ K+ Y N
Sbjct: 290 VIKELMSKKFYSINFPFLQPVDPVALNIPNYFDIVKEPMDLGSIQTKLANNQ---YENGD 346
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
E DVRLVFKN +N E +DVH M + L + F++KW
Sbjct: 347 EFEKDVRLVFKNCYLFNPEGNDVHSMGQRLEQVFDKKW 384
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ I + + A PF+HPVDV L + YY I++PMD STI+ K+ + Y + ++
Sbjct: 127 IKAIKRLRDAGPFLHPVDVVKLNVPLYYNYIKRPMDLSTIERKL---NLNAYEDPSQVVD 183
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
D L+ N +++N E + MAK++ +FE+ L + PKVM
Sbjct: 184 DFNLMVSNCLRFNGENSGISRMAKNIQAQFEKHMLNIPPKVM 225
>gi|145353027|ref|XP_001420833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581068|gb|ABO99126.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 904
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 8/112 (7%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR L R +I R + HK A+ F+ PVD + DY+EVI+ PMD TIK ++D
Sbjct: 407 GGRVATPLTR-IKSIHRSLMVHKNAYIFLRPVDPVYWEIPDYFEVIKNPMDLGTIKERID 465
Query: 157 GKDGTGY---RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
GY +NV ADVRLV+ NAM YN + V MA+ + +FE +W
Sbjct: 466 A----GYYDEKNVEAYAADVRLVWSNAMTYNKDDTPVFKMARIMSREFEYQW 513
>gi|160333520|ref|NP_001103994.1| bromodomain containing 2b [Danio rerio]
gi|157280795|gb|ABV29330.1| truncated bromodomain-containing protein 2b [Danio rerio]
Length = 276
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H +AWPF PVD L L DY+++I++PMD TIK +++
Sbjct: 69 GRATNQLQFLHKVLVKALWRHHFAWPFHEPVDATRLNLPDYHKIIKQPMDMGTIKKRLEN 128
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
YR E D +F N YN DD+ +MA+SL + F +K Q+
Sbjct: 129 NY---YRGASECLQDFNTMFTNCYIYNKPADDIVLMAQSLEKVFLQKVAQM 176
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B [Pan
troglodytes]
Length = 2198
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 2044 TEDEDSASTSSSLKRGNKDLKKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMIL 2103
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ G Y N+ D
Sbjct: 2104 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSGGQ---YPNLETFALD 2158
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ ++ + FE+KW
Sbjct: 2159 VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2191
>gi|353240913|emb|CCA72759.1| hypothetical protein PIIN_06697 [Piriformospora indica DSM 11827]
Length = 871
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 35/240 (14%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+A+PF PVD L + Y +VI+KPMD +T+ +K+ + Y N Y D +L+ KN
Sbjct: 541 FAYPFYEPVDYIKLEIPHYPKVIKKPMDMATMSSKLSNHE---YPNATAFYNDFKLMIKN 597
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
+N VH L F+EKW L + + EE+E+ A+ + Q
Sbjct: 598 CFAFNPAGTPVHQAGVELNAVFDEKWQGLPNPYGDSDDGAEEDESDAERSNAVMMMEAQI 657
Query: 240 NKAKELRSELNEV----------DMQLENLRETVIQKCRK-------------------M 270
+ L S L ++ +M + ++ + K +
Sbjct: 658 ---QSLHSALEQLKKPKKEKKPKNMGMPSMPKPPKAPSNKPPGAGGFKKKKKPTEDEDTL 714
Query: 271 STEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
S E+KK L + L L K LEI+ E P T++E++LD+D+ L RL FV
Sbjct: 715 SFEQKKQLSETIQTLDGNRLEKVLEIIDEVYPEIRETSEEIELDIDSLPSHVLNRLYNFV 774
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN--- 153
R M + + +FA +I R + + K A PF+ PVD L + Y ++I PMD ST++
Sbjct: 330 ARPMTQPQNKFALSIVRTLRKSKDAIPFLVPVDPVALNIPHYPQIITNPMDLSTVEKKLG 389
Query: 154 --KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
KMD Y NV E AD++L+ +N K+N V MA + E+F+
Sbjct: 390 GAKMDTAQYARYANVDEFVADIKLIIENCAKFNGPEHPVTQMALRMEEQFD 440
>gi|412985439|emb|CCO18885.1| unnamed protein product [Bathycoccus prasinos]
Length = 1101
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 10/102 (9%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-------YRNVR--EI 169
K+++PF+ VD L + DY++VI PMDF TI +++ +D G Y N EI
Sbjct: 548 KYSFPFLEKVDPVALNIPDYFDVISDPMDFGTIFKRLEPEDEKGVPIEPTYYTNESDPEI 607
Query: 170 YA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+A DVRLVF NA +YN V+V A+ L + FE +W Q P
Sbjct: 608 FANDVRLVFANAFRYNQPGTFVYVCAEKLAQIFEREWSQKFP 649
>gi|395334140|gb|EJF66516.1| Bromodomain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 798
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 41/262 (15%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
Q ++ A PF PVD +G+ +Y ++++KPMD ST+K K+D D Y +
Sbjct: 461 LHQKQHYQIAHPFYEPVDPIKMGIPEYPKIVKKPMDLSTMKRKLDTGD---YPTPEKFRD 517
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL-LPKVME------EEKRQEEEEA 224
D RL+ KN M +N + VH KSL F+EKW L +P+ + EE E ++
Sbjct: 518 DFRLMVKNCMTFNPPGNPVHEAGKSLQNLFDEKWKNLPIPRSHDLSDDEDEEDEYESDDE 577
Query: 225 KAQL-----DMQLTQEAVQTNKAKELR----------------SELNEVDMQLENLRETV 263
+A++ DM+ +++ N A R + +
Sbjct: 578 RARMEGMIADMESQIASMKNNLAALKRNGKEKEKKKEKREKPTPPVASTSKSAPKHSKAP 637
Query: 264 IQKCRK----------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDL 313
+QK +K ++ E+KK+L +++L L K ++I+ + P + +E++L
Sbjct: 638 LQKSKKGKKPVTDDDVLTFEQKKDLSDTISKLDGAKLEKVIQIIHDGVPEIRDSTEEIEL 697
Query: 314 DMDAQSELTLWRLKVFVQESLK 335
++D L +L FV +K
Sbjct: 698 EIDQLPAAVLTKLYNFVIRPMK 719
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 90 AFHREEAAGRRMQELK--RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMD 147
A+ E AG + R ++ R + + K A PF++PVD LG+ Y +VI++PMD
Sbjct: 234 AYPPAEPAGPSTLSVAQWRFSSSTVRTLKKMKDAGPFLNPVDPVALGIPHYPQVIKRPMD 293
Query: 148 FSTIKNKMDGKDGTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
FSTI+ K+ + Y + + DVRL+F N + +N V M K +
Sbjct: 294 FSTIERKLAASNPAKPDPNPSNPRYHHAEQFVQDVRLIFTNCVTFNGPDHPVTQMGKRVE 353
Query: 199 EKFEEKWLQLLP 210
F+++ Q+ P
Sbjct: 354 AVFDKQIKQMPP 365
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1971 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2025
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2026 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2085
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2086 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2140
Query: 193 MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTN 240
++ + FE+KW + E+ + A QLT + +
Sbjct: 2141 AGHNMRKYFEKKWTDTFKPLCYEDALAAKPYGAANSYHQLTSPVTEAS 2188
>gi|303287933|ref|XP_003063255.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455087|gb|EEH52391.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 120
Score = 78.6 bits (192), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + +HK+ + F HPVD LG+ DY +VI+ PMD T+ +K+ GY + RE
Sbjct: 23 VLNALKRHKYYFVFEHPVDPVALGIPDYPDVIKDPMDLGTVGDKLARG---GYLHPREFE 79
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D RL F+N YN D H M ++L++FE+ WL +
Sbjct: 80 YDCRLTFQNCKTYNSPGTDAHSMGDAMLKEFEKNWLNM 117
>gi|224129398|ref|XP_002328707.1| bromodomain protein [Populus trichocarpa]
gi|222839005|gb|EEE77356.1| bromodomain protein [Populus trichocarpa]
Length = 302
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+ELK FA I ++I + A F PVD LGLHDY+ V++ PMDF TI + ++G
Sbjct: 152 EELKACFAVI-KKIMEMDEAKSFNSPVDPASLGLHDYFAVVDTPMDFGTICKNL--QNGV 208
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV+ +++N +KYN + D + + K + +KF + W
Sbjct: 209 KYLNGEDVYKDVQYIWENCLKYNKKGDYIVYLMKRVKKKFMKYW 252
>gi|255071051|ref|XP_002507607.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226522882|gb|ACO68865.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 433
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 108 FAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD----GTGY 163
F I R++ ++ +WPF PVD E G+ DYYEVI+ PMDF TI K D D +G+
Sbjct: 148 FPKILRKLMNNRLSWPFNEPVDAEYWGVQDYYEVIKTPMDFGTIATKYDIGDYNTENSGH 207
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
++ + DVR VF NA YN V+ A+ L FE
Sbjct: 208 GALKFV-TDVRQVFYNAWTYNQPGHQVYQYAQILARIFE 245
>gi|296233153|ref|XP_002761896.1| PREDICTED: bromodomain-containing protein 4 [Callithrix jacchus]
Length = 985
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 28/34 (82%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKN 153
+AWPF PVDVE LGLHDY ++I+ PMD STIK+
Sbjct: 372 YAWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKD 405
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 563 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 622
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 623 ELERYVTSCLR 633
>gi|261278845|pdb|3JVJ|A Chain A, Crystal Structure Of The Bromodomain 1 In Mouse Brd4
gi|261278846|pdb|3JVK|A Chain A, Crystal Structure Of Bromodomain 1 Of Mouse Brd4 In
Complex With Histone H3-K(Ac)14
gi|302566174|pdb|3MUK|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Propionylated
Histone H3- K(Prop)23
gi|302566176|pdb|3MUL|A Chain A, Crystal Structure Of Brd4 Bromodomain 1 With Butyrylated
Histone H3- K(Buty)14
Length = 131
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 21 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 77
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 78 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 123
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic construct]
Length = 2168
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1979 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2033
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2034 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2093
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2094 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2148
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2149 AGHNMRKYFEKKW 2161
>gi|426337492|ref|XP_004032738.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Gorilla gorilla gorilla]
Length = 2090
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1901 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 1955
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 1956 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2015
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2016 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2070
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2071 AGHNMRKYFEKKW 2083
>gi|410979451|ref|XP_003996097.1| PREDICTED: bromodomain-containing protein 3 [Felis catus]
Length = 695
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 90
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 91 -ENSYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 154 KMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 332 KMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 383
>gi|324504882|gb|ADY42105.1| Homeotic protein female sterile [Ascaris suum]
Length = 696
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +T+H+ AWPF+ PVD L + DY+ V+++PMD +TI ++ + Y + E
Sbjct: 100 VLDPLTRHQHAWPFISPVDAVKLNIPDYHNVVKRPMDLNTIGKRL---QNSYYFSAEECM 156
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
D +F N +YN + DDV +M K++ ++ EK L+LLP
Sbjct: 157 HDFETIFANCYEYNRKEDDVWLMCKNIENEYREK-LKLLP 195
>gi|451856062|gb|EMD69353.1| hypothetical protein COCSADRAFT_166346 [Cochliobolus sativus
ND90Pr]
Length = 912
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 102 QELKRQFA-AIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
QELK F ++ ++ + K++ +PF PVD L + Y ++I+KPMDF TI+ +
Sbjct: 543 QELK--FCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNL-- 598
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K+G Y++ ++ YAD +LVF+N K+N E D V+ M L E FE W
Sbjct: 599 KNGV-YQSAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLW 645
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + YY+V++ PMD +T++ K+ K Y+ VR+ AD+ + N+ +
Sbjct: 362 FKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKK---YKYVRDFMADLDQMITNSELF 418
Query: 184 NDERDDVHVMAKSLLEKF 201
N+++ V +L F
Sbjct: 419 NNKQHPVTQAGYNLRAYF 436
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1953 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2007
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2008 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2067
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2068 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2122
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2123 AGHNMRKYFEKKW 2135
>gi|452003453|gb|EMD95910.1| hypothetical protein COCHEDRAFT_1210171 [Cochliobolus
heterostrophus C5]
Length = 912
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 102 QELKRQFA-AIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
QELK F ++ ++ + K++ +PF PVD L + Y ++I+KPMDF TI+ +
Sbjct: 543 QELK--FCESVITELMKPKYSTLTYPFTSPVDPVALNIPSYLKIIKKPMDFGTIEKNL-- 598
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K+G Y++ ++ YAD +LVF+N K+N E D V+ M L E FE W
Sbjct: 599 KNGV-YQSAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEELFESLW 645
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + YY+V++ PMD +T++ K+ K Y+ VR+ AD+ + N+ +
Sbjct: 362 FKDPVDPVALNIPTYYDVVKHPMDLTTMEAKLKEKK---YKYVRDFMADLDQMITNSELF 418
Query: 184 NDERDDVHVMAKSLLEKF 201
N+++ V +L F
Sbjct: 419 NNKQHPVTQAGYNLRAYF 436
>gi|134105371|pdb|2OSS|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein 4 (Brd4)
gi|308198555|pdb|3MXF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Jq1
gi|312208162|pdb|3P5O|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ibet Inhibitor
gi|340707484|pdb|2YEL|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
With The Inhibitor Gw841819x
gi|343197715|pdb|3SVF|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Dihydro-Quinazolin Ligand
gi|343197716|pdb|3SVG|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-Dimethylisoxazol Ligand
gi|355333223|pdb|3ZYU|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|355333224|pdb|3ZYU|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With I-Bet151(Gsk1210151a)
gi|358009753|pdb|3U5J|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Alprazolam
gi|358009754|pdb|3U5K|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009755|pdb|3U5K|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009756|pdb|3U5K|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009757|pdb|3U5K|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Midazolam
gi|358009758|pdb|3U5L|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Benzo-Triazepine Ligand (Bzt-7)
gi|371927880|pdb|4A9L|A Chain A, N-Terminal Bromodomain Of Human Brd4 With 1,3-Dimethyl-6-(
Morpholine-4-Sulfonyl)-1,2,3,
4-Tetrahydroquinazolin-2-One
gi|372467090|pdb|3UVW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k5ack8ac)
gi|372467092|pdb|3UVY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k16ack20ac)
gi|374074443|pdb|3UVX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k12ack16ac)
gi|380259062|pdb|3UW9|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259063|pdb|3UW9|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259064|pdb|3UW9|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|380259065|pdb|3UW9|D Chain D, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Diacetylated Histone 4 Peptide
(H4k8ack12ac)
gi|384482557|pdb|4E96|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With The Inhibitor Pfi-1
gi|404312911|pdb|4F3I|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With Ms417 Inhibitor
gi|409107327|pdb|4GPJ|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Isoxazolylbenzimidazole Ligand
gi|410563162|pdb|4HBV|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563164|pdb|4HBX|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|410563165|pdb|4HBY|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazolin Ligand
gi|449802776|pdb|4J0R|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
gi|449802777|pdb|4J0S|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A 3,5-dimethylisoxazol Ligand
Length = 127
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 17 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 73
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 74 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|340721599|ref|XP_003399205.1| PREDICTED: bromodomain-containing protein 2-like [Bombus
terrestris]
Length = 388
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ + + +H++AWPF PVD + L L DY+++I++PMD TIK ++ + T Y + +E
Sbjct: 77 GVLKPVWKHQFAWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRL---ENTYYWSGKEC 133
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D +F N YN +DV VMA++L + F K Q+
Sbjct: 134 IQDFNTMFTNCYVYNKPGEDVVVMAQALEKLFLTKVAQM 172
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 2015 TEDEDSASTSSSLKRGNKDLKKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMIL 2074
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ D
Sbjct: 2075 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALD 2129
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2130 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2162
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1978 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2032
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2033 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2092
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2093 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2147
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2148 AGHNMRKYFEKKW 2160
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1981 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVSLTGDTEDEDSASTSSSLKRGNKDL 2035
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2036 KKRKMEESTSINLSKQESFTSIKKPKRDDAKDLALCSMILTEMETHEDAWPFLLPVNLKL 2095
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y ++ DVRLVF N +N++ D+
Sbjct: 2096 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPSLEAFALDVRLVFDNCETFNEDDSDIGR 2150
Query: 193 MAKSLLEKFEEKW 205
S+ + FE+KW
Sbjct: 2151 AGHSMRKYFEKKW 2163
>gi|449802362|pdb|4DON|A Chain A, Brd4 Bromodomain 1 Complex With A Fragment
3,4-dihydro-3-methyl-2(1h)- Quinazolinon
Length = 145
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK +++
Sbjct: 37 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENN 96
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 97 ---YYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 139
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L + K T +K V T+D + +T+ S+ + L
Sbjct: 1980 IAKASGQTLKIKKLQ-----VKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDL 2034
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + S+ +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2035 KKRKMEENTSVNLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2094
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2095 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2149
Query: 193 MAKSLLEKFEEKWLQLL 209
S+ + FE+KW +
Sbjct: 2150 AGHSMRKYFEKKWTDIF 2166
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1815 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 1869
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 1870 KKRKMEENTSISLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 1929
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 1930 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 1984
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 1985 AGHNMRKYFEKKW 1997
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos grunniens
mutus]
Length = 2166
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + +SI +Q++F + R + + I
Sbjct: 2012 TEDEDSASTSSSLKRGVKDLKKRKMEENSSINISKQESFTSVKKPKRDDSKDLALCSMIL 2071
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ D
Sbjct: 2072 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALD 2126
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2127 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2159
>gi|312373442|gb|EFR21185.1| hypothetical protein AND_17423 [Anopheles darlingi]
Length = 401
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR ++ + + + +H+++WPF PVD + L L DY+++I++PMD TIK +++
Sbjct: 63 GRLTNQIHFLLRTVMKAVWKHQFSWPFQQPVDAKKLNLPDYHKIIKQPMDLGTIKKRLEN 122
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
Y + +E D +F N YN +DV VMA++L + F K + L+PK
Sbjct: 123 NY---YWSAKECIKDFNTMFTNCYVYNKPGEDVVVMAQTLEKLFLTK-VSLMPK 172
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Ailuropoda melanoleuca]
Length = 2169
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++V+ L+ I K T +K V T+D + +T+ S+ + L
Sbjct: 1980 IAKASGQTLKVKKLH-----IKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDL 2034
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + S+ +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2035 KKRKMEENTSVNLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2094
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2095 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2149
Query: 193 MAKSLLEKFEEKWLQLL 209
++ + FE+KW +
Sbjct: 2150 AGHNMRKYFEKKWTDIF 2166
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 2177 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 2231
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 2232 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2291
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2292 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 2346
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 2347 AGHNMRKYFEKKW 2359
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + +SI +Q++F + R + + I
Sbjct: 2013 TEDEDSASTSSSLKRGVKDLKKRKMEENSSINISKQESFTSVKKPKRDDSKDLALCSMIL 2072
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ D
Sbjct: 2073 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALD 2127
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2128 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2160
>gi|384493749|gb|EIE84240.1| hypothetical protein RO3G_08950 [Rhizopus delemar RA 99-880]
Length = 435
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 102 QELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
+E ++ ++ ++ + K A WPF PVD G DYY++I++PMD +TI+ K
Sbjct: 152 EEERKHIGSVIKEFKKPKHAHLTWPFERPVDAAAWGAADYYDIIKQPMDMATIEEKW--- 208
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ Y N E Y D +L+F+N KYN +VH++ K F++ W
Sbjct: 209 KQSKYANEDEFYNDYKLIFENCYKYNPPHHEVHLLGKKFEAAFDKYW 255
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 105 KRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 164
KR IF+++ +A PF+ PVD + DY+++I+ PMD STI+ K+D Y
Sbjct: 35 KRLVTGIFKKLWNCPFATPFLQPVDPVYFNIPDYFDIIKHPMDLSTIQKKLD-----DYH 89
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 221
+ E ADV L+ N YN+ D V A+ + F+++ ++L E+K EE
Sbjct: 90 SKEEFIADVELMLNNCYLYNNPTDPVCDTAREFEKMFKKQLIKLRATPPAEKKTPEE 146
>gi|431892496|gb|ELK02931.1| Bromodomain-containing protein 4 [Pteropus alecto]
Length = 1345
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLKVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 140 EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 199
++I+ PMD STIK+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L +
Sbjct: 392 DIIKHPMDMSTIKSKLEARE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 200 KFEEKWLQL 208
FE ++ ++
Sbjct: 449 VFEMRFAKM 457
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 606 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 665
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 666 ELERYVTSCLR 676
>gi|170284622|gb|AAI61214.1| Unknown (protein for IMAGE:8889270) [Xenopus (Silurana) tropicalis]
Length = 356
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 29 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDCVKLNLPDYHKIIKNPMDMGTIKKRLEN 88
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 89 NY---YWSANECMQDFNTMFTNCYIYNKSTDDIVLMAQALEKIFLQKVAQM 136
>gi|401842077|gb|EJT44353.1| BDF2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 634
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I R + K + +PF+ PVD L L +Y+E+I+ P
Sbjct: 304 DIYENSKPKSKTLQKKFRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNP 363
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ V + DV LVF N ++N E ++VH+M K L E F
Sbjct: 364 MDLGTISNNLMNWK----YKTVDQFINDVNLVFLNCFQFNPEGNEVHLMGKKLKELFSVH 419
Query: 205 WLQ 207
WL+
Sbjct: 420 WLE 422
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF++PVD L + Y+ ++ PMD S I K+ + Y +V ++ +D R +
Sbjct: 150 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKL---QESTYHSVEQVKSDFRTMVN 206
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N V +MAK + FE K + P+V+
Sbjct: 207 NCLSFNGLESSVSLMAKRIQIYFERKLSAMPPRVL 241
>gi|301608560|ref|XP_002933843.1| PREDICTED: bromodomain-containing protein 3 [Xenopus (Silurana)
tropicalis]
Length = 1013
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 75 LKDRHV-ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
+ RH+ +SI + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 MSSRHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKL 62
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
L DYY++I+ PMD STI+ ++ + Y + D +F N YN DD+ VM
Sbjct: 63 NLPDYYQIIKNPMDLSTIRKRL---EYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVM 119
Query: 194 AKSLLEKFEEKWLQL 208
++ L + F EK ++
Sbjct: 120 SQELEKVFMEKIAEM 134
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDVRLMFMN 366
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ KYN ++V MA+ + + FE + ++
Sbjct: 367 SYKYNPPDNEVVNMARKMQDVFEGMFAKI 395
>gi|195397557|ref|XP_002057395.1| GJ16365 [Drosophila virilis]
gi|194147162|gb|EDW62881.1| GJ16365 [Drosophila virilis]
Length = 429
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 87 QQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPM 146
Q +E GR +L+ + + I +H ++WPF PVD + L L DY+++I++PM
Sbjct: 22 QPPVVPPQERPGRNTNQLQYLIKTVMKVIWKHHFSWPFQQPVDAKKLNLPDYHKIIKQPM 81
Query: 147 DFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
D TIK +++ Y + +E D +F N YN +DV VMA++L + F +K +
Sbjct: 82 DMGTIKKRLENNY---YWSAKEAIHDFNTMFTNCYVYNKPGEDVVVMAQTLEKVFLQK-I 137
Query: 207 QLLPK 211
+ +PK
Sbjct: 138 ESMPK 142
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
+AWPF PVD E LGLHDY+++I+KPMD T+K KMD ++ Y++ E A +
Sbjct: 364 YAWPFYKPVDAELLGLHDYHDIIKKPMDLGTVKRKMDNRE---YKSAPEFAARCSI 416
>gi|63054449|ref|NP_588301.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe
972h-]
gi|46397302|sp|Q9Y7N0.1|BDF1_SCHPO RecName: Full=SWR1 complex bromodomain subunit bdf1
gi|157310522|emb|CAB41059.2| Swr1 complex bromodomain subunit Brf1 [Schizosaccharomyces pombe]
Length = 578
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 34/235 (14%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+A+PF PVD DY++VI++PMD STI++K++ + Y + E +D+ L+F N
Sbjct: 275 FAFPFYQPVDPVACDCPDYFDVIKEPMDLSTIQSKLNKNE---YSTLEEFESDILLMFNN 331
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE-KRQEEEEAKAQLD----MQLTQ 234
YN VHVM + L F+EKW + PK + +Q+E E A D +
Sbjct: 332 CFTYNPPGTPVHVMGRQLENVFKEKW-EARPKFDDATLVKQQEAETDALFDNGEEEEALM 390
Query: 235 EAVQTNKAKELRSELNEVDMQLENLRETV-IQKCRKMS----------TEEKKNLGTAL- 282
+ N AK VD Q+ L++T+ K +KM+ T+E + A+
Sbjct: 391 SEEEINGAK-----FAAVDKQISMLQDTLEAMKAKKMNRMRKPRRRDLTKEYGPITYAMQ 445
Query: 283 -------TRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
LS E L EI+ E P T E+++D+ R+ +V
Sbjct: 446 NELAERCNYLSAEQLSNVAEILREEMPWLRDT-DEIEIDVGNMKPEVFHRIYRYV 499
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 98 GRRMQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
G M ++++ AI RQ+ + K + PF PVD + DY +++ PMD TI+ K+
Sbjct: 82 GSGMPPPQQKYCLAIVRQLKRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLT 141
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y +E D+ L+F N YN V M K+L E FE + QL
Sbjct: 142 SYE---YSVPQEFIDDMNLMFSNCFLYNGTESPVGSMGKALQEVFERQLKQL 190
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++V+ L+ I K T +K V T+D + +T+ S+ + L
Sbjct: 1933 IAKASGQTLKVKKLH-----IKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGNKDL 1987
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + S+ +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 1988 KKRKMEENTSVNLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 2047
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 2048 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 2102
Query: 193 MAKSLLEKFEEKWLQLL 209
++ + FE+KW +
Sbjct: 2103 AGHNMRKYFEKKWTDIF 2119
>gi|417406856|gb|JAA50069.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2011
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1857 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 1916
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 1917 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 1971
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 1972 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2004
>gi|417414064|gb|JAA53334.1| Putative chromatin remodeling complex wstf-iswi large subunit,
partial [Desmodus rotundus]
Length = 2092
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1938 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 1997
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 1998 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2052
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2053 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2085
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1989 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 2048
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 2049 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2103
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2104 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2136
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1891 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 1950
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 1951 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2005
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2006 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2038
>gi|341892468|gb|EGT48403.1| hypothetical protein CAEBREN_29751 [Caenorhabditis brenneri]
Length = 283
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 125 MHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKY 183
M PVD E LGLHDY+++I++P+D TI+ KMD TG Y+ + D+RL+ N Y
Sbjct: 1 MEPVDAEKLGLHDYHKIIKEPIDLKTIRTKMD----TGVYKEPADFAHDIRLMLNNCFLY 56
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQL 208
N D VH+ E FE++W +L
Sbjct: 57 NPVGDPVHIFGMKFKEVFEKRWAEL 81
>gi|417406918|gb|JAA50099.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2172
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 2018 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 2077
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 2078 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2132
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2133 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2165
>gi|410563163|pdb|4HBW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd4
In Complex With A Quinazoline Ligand
Length = 127
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 17 RETNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRL--- 73
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 74 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 119
>gi|194885054|ref|XP_001976378.1| GG20046 [Drosophila erecta]
gi|190659565|gb|EDV56778.1| GG20046 [Drosophila erecta]
Length = 257
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
+KR F+ ++ I AW F P+D + LGLHDY+E++ +PMD ST++++++ TG
Sbjct: 20 IKRMFSTTYKNI-----AWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRLN----TGC 70
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQ 219
Y + DVRL+F N Y + + MAK L FEE + Q+ KR+
Sbjct: 71 YLTAADFAKDVRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQVQLYTCSRTKRR 127
>gi|417406892|gb|JAA50086.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2074
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1920 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 1979
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 1980 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2034
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2035 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2067
>gi|225559913|gb|EEH08195.1| bromodomain-containing protein BDF1 [Ajellomyces capsulatus G186AR]
Length = 501
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 157 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLMFKN 212
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + KSL E F+ KW Q
Sbjct: 213 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 240
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 2052 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 2111
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 2112 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2166
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2167 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|223993693|ref|XP_002286530.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977845|gb|EED96171.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 215
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M ++ + + Q A PF PVD + LGL DY V++KPMD +K K++
Sbjct: 1 MSNPEQAMSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNE--- 57
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
+ Y+++ + DVRL++KN M YN + D +++A+++ +KFEEK+ +L+
Sbjct: 58 SKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLV 106
>gi|154287696|ref|XP_001544643.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408284|gb|EDN03825.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 627
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF +PVD L + Y+ +I+KPMD T++ K+ TG Y N +E+ ADVRL+FKN
Sbjct: 283 AIPFYYPVDPVALNIPTYHSIIKKPMDLQTVQTKLQ----TGQYENAKEMEADVRLMFKN 338
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + KSL E F+ KW Q
Sbjct: 339 CYKFNIPGDPTYNSGKSLEEVFDNKWSQ 366
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD L + +Y +I++PMD TI+ K+ K G+ Y ++ + +D L+ N++ +
Sbjct: 98 FREPVDPVKLNIPNYPLIIKQPMDLRTIEEKL--KAGS-YTSLFAVTSDFDLMVDNSVTF 154
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQL 208
N V + +L + FE +L
Sbjct: 155 NGPEHVVSMEGANLKQSFERHLAKL 179
>gi|256079712|ref|XP_002576129.1| bromodomain-containing protein 3 brd3 [Schistosoma mansoni]
gi|353230012|emb|CCD76183.1| putative bromodomain-containing protein 3, brd3 [Schistosoma
mansoni]
Length = 692
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K +++ R R+ E + + I + I+ ++ F+ PVDV LGLHDYY
Sbjct: 238 IKKPKREYEERNVGKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 297
Query: 140 EVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD STIK K++ G+ T Y + DVRL+F N KYN E +V + K L
Sbjct: 298 DVVKKAMDLSTIKTKLESGQYHTKY----DFADDVRLMFNNCYKYNGEDSEVARVGKQLQ 353
Query: 199 EKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD---MQLTQEAVQ-----TNKAKELRSELN 250
F+E + KV ++E +D QL Q A++ TN+ + +L
Sbjct: 354 AIFDENFA----KVPDDESDPAASPDGRPVDQNMYQLIQNAIKEHQKLTNQFQRFSEDLQ 409
Query: 251 EVDMQLENLRETVIQKCRK 269
+ L ++ ++ RK
Sbjct: 410 KSTANLNSILSSLSMAVRK 428
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 15/180 (8%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
H + +++ +K++ + ++ + K WPF PVD + L L DY ++I+ PMD TI
Sbjct: 29 HSSKITTNQLEYIKKE---VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTI 85
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
K +++ K Y + E D+ +F+N +N DDV MA LE+ + L+ +P
Sbjct: 86 KQRLNLK---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMK-LEQIARERLKFMPT 141
Query: 212 VMEEEKRQEEEEAKAQLDMQL--------TQEAVQTNKAKELRSELNEVDMQLENLRETV 263
E Q+ ++ + L A TN + L VD R +V
Sbjct: 142 PETEICPQKTPKSIRPIGAPLQVHPPIEPIHTAASTNHTEGLNGSAVSVDQTTLPFRPSV 201
>gi|308498241|ref|XP_003111307.1| CRE-BET-1 protein [Caenorhabditis remanei]
gi|308240855|gb|EFO84807.1| CRE-BET-1 protein [Caenorhabditis remanei]
Length = 856
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+ WPF PV+ LGLHDY+++I++PMD TIK K++ + Y+ + D+RL+ N
Sbjct: 265 FTWPFHDPVNAAELGLHDYHKIIKEPMDMKTIKRKLECGE---YKEPADFERDIRLMLNN 321
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
YN D VH K E F+++W ++
Sbjct: 322 CFIYNPIGDPVHNFGKKFEEVFDKRWAEM 350
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L + ++ +HK WPF PVD L + Y+E + +PMD TI++++
Sbjct: 39 RHTNKLDYIMTTVLKEAAKHKHVWPFQKPVDAVTLCIPLYHERVLRPMDLKTIESRL--- 95
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
T Y +E D+ VF N +N + DDV +MA+++ E ++ K +E+ R
Sbjct: 96 KSTYYTCAQECIDDIETVFNNCYTFNGKEDDVTIMAQNVHE--------VIKKSLEQAPR 147
Query: 219 QEEE 222
+E +
Sbjct: 148 EEHD 151
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1954 TEDEDSASTSSSLKRGSKDLKKRKMEENTSINLSKQESFASVKKPKRDDSKDLALCSMIL 2013
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N D
Sbjct: 2014 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YLNPESFALD 2068
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2069 VRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2101
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus gallus]
gi|22653663|sp|Q9DE13.1|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein 2B;
AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + TS S+ K + K R + S+ + +Q+ F + R + + I
Sbjct: 1976 TEDEDSATTSTSLKRGKTEPKKRKMDESVSVSQGKQENFTAIKKPKRDDSKDLAICSMIL 2035
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y NV D
Sbjct: 2036 SELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQ---YPNVEAFSLD 2090
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
VRLVF N +N++ D+ ++ + FE+KW ++
Sbjct: 2091 VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2127
>gi|452821989|gb|EME29013.1| histone acetyltransferase [Galdieria sulphuraria]
Length = 423
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 38 QKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISI-----AKEKLK--DRHVASIEKQQQDA 90
QK+ +E KL ++ ++ P K I + KE L+ +R + + A
Sbjct: 255 QKMCLIE-KLKEISNIHIVYPGLDPEARKRIRLEDIPGLKEGLEQSERSLGKTIPLESLA 313
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFST 150
R+ A+ +Q L ++ I Q+ QH+ AWPF+ PVD E G DYY+VI+ P+D T
Sbjct: 314 APRDPAS---LQALHKELQHILTQVKQHQSAWPFLEPVDPEQTGALDYYDVIKNPIDLRT 370
Query: 151 IKNKMDGKDGTGYRNVREIY-ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
I+ ++D D Y +EI+ AD++ + +N YN E+ + +A +L F +K
Sbjct: 371 IQERLDRGD---YYVTKEIFAADLKRMIENCEAYNGEKHFITELAHNLERFFNQK 422
>gi|189198604|ref|XP_001935639.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187982738|gb|EDU48226.1| bromodomain containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 851
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 9/108 (8%)
Query: 102 QELKRQFA-AIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
QELK F ++ ++ + K++ +PF+ PVD L + Y ++I+KPMDF TI+ +
Sbjct: 486 QELK--FCESVLTELMKPKYSAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNL-- 541
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K+G Y++ ++ YAD +LVF+N K+N E D V+ M L + FE W
Sbjct: 542 KNGV-YQSAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLW 588
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD LG+ Y E+++ PMD ST+++K+ K Y VR+ AD+ + N+ +
Sbjct: 304 FKDPVDPVALGIPQYPEIVKHPMDLSTMESKLKEKK---YTYVRDFMADLDQMITNSELF 360
Query: 184 NDERDDVHVMAKSLLEKF 201
N+++ V +L F
Sbjct: 361 NNKQHPVTQAGYNLRAYF 378
>gi|384245392|gb|EIE18886.1| hypothetical protein COCSUDRAFT_45033 [Coccomyxa subellipsoidea
C-169]
Length = 554
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG----YRNVREIYADVRLVFKN 179
F+ PVD L + DY++ ++ PM + + K+ G Y++V E D+R +++N
Sbjct: 2 FVEPVDPVKLKIVDYFQYVKNPMALNDVAGKLSHNPAKGSFRKYKDVYEFRDDMRQIWEN 61
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQT 239
YN V + E +E+KW + E++ EEE+ + + E
Sbjct: 62 CRLYNPIGQPVRTNGDWMSEYWEKKW-----AISGIEQKWEEEQLRQR------HEETML 110
Query: 240 NKAKELRSELNEVDMQLENLR----ETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 295
EL + E+D +L L+ E R M+ EEK+ L L LS + L +E
Sbjct: 111 AGGPELPHHMEEMDRELRMLQQQDGEVAAPGNRPMTFEEKRRLSQGLGSLSGDKLGLVME 170
Query: 296 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQ--------ESLKAASRSSGDMGGN 347
I+AE EV++D+D ++ TLWRL V ++ A R GD G
Sbjct: 171 IIAECQRIDQEA--EVEVDIDDLNQDTLWRLNALVTDMSIGRVLDTGGATMREGGDGAGG 228
Query: 348 NNN 350
N+
Sbjct: 229 ANH 231
>gi|50553560|ref|XP_504191.1| YALI0E20537p [Yarrowia lipolytica]
gi|49650060|emb|CAG79786.1| YALI0E20537p [Yarrowia lipolytica CLIB122]
Length = 653
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 40/255 (15%)
Query: 111 IFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
+ +++T K +++PF+ PVD L Y+++I++PMD ST++ KM + Y
Sbjct: 317 VLKELTSKKHEEYSFPFLLPVDPVALNCPSYFKIIKEPMDLSTVQEKM---NNNAYETAD 373
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ------LLPKVMEEEKRQEE 221
E +DVRL+FKN ++N + V+ M K L F++KW + P M++ +E
Sbjct: 374 EFESDVRLIFKNCYRFNPDGTPVNKMGKRLEAIFDKKWAEKPIPPPSPPPTMDDSSDYDE 433
Query: 222 EEAKAQLDMQLTQEAVQ--TNKAKELRSELNEVDMQLENLRETVIQKCRK---------- 269
+ L +T A+ + + ++ EL + M+ + RE + R
Sbjct: 434 YSSDEDLASSITNPAIAFLEEQIERMKQELTK--MKKDAAREMKRSRRRGSSKRSKSSSK 491
Query: 270 -------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQ-EVDLDM 315
+S E KK L + +L + L + ++ E+ P + Q E++LDM
Sbjct: 492 RKGSRSSDSGGVVVSYEMKKELSERIPQLKEKQLQHVINLIHESMPQLKSEGQDEIELDM 551
Query: 316 DAQSELTLWRLKVFV 330
D TL +L +V
Sbjct: 552 DQLDPHTLMKLYNYV 566
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
A+ + + + K A PF+HPVD L + Y+EVI+ PMD T++ K++ + Y +
Sbjct: 130 ASSLKAVKRLKDAAPFIHPVDPVKLNIPTYFEVIKHPMDLGTMEKKLNNGE---YGTKED 186
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ ADV+ + N + +N + MAKSL FE
Sbjct: 187 MIADVQRIVDNCLTFNGADSFISSMAKSLFTSFERHMFNF 226
>gi|114108122|gb|AAI23311.1| LOC398944 protein [Xenopus laevis]
Length = 465
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 75 LKDRHV-ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
+ RH +SI F + GR +L+ + + + +H+++WPF PVD L
Sbjct: 3 MSSRHPHSSIVNPPPPEFINRKKTGRLTNQLQYLEKLVLKSLWRHQFSWPFQQPVDAVKL 62
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
L DYY++I+ PMD STI+ ++ + Y + D +F N YN DD+ +M
Sbjct: 63 NLPDYYQIIKNPMDLSTIRKRL---EYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVLM 119
Query: 194 AKSLLEKFEEK 204
A+ L + F EK
Sbjct: 120 AQELEKAFMEK 130
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF DV L DY + ++ PMD TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKME--NGL-YKDTQDFASDVRLMFMN 365
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN ++V MA+ L + FE
Sbjct: 366 CYKYNPPDNEVVNMARKLQDVFE 388
>gi|38014413|gb|AAH60452.1| LOC398944 protein, partial [Xenopus laevis]
Length = 466
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 75 LKDRHV-ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
+ RH +SI F + GR +L+ + + + +H+++WPF PVD L
Sbjct: 3 MSSRHPHSSIVNPPPPEFINRKKTGRLTNQLQYLEKLVLKSLWRHQFSWPFQQPVDAVKL 62
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
L DYY++I+ PMD STI+ ++ + Y + D +F N YN DD+ +M
Sbjct: 63 NLPDYYQIIKNPMDLSTIRKRL---EYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVLM 119
Query: 194 AKSLLEKFEEK 204
A+ L + F EK
Sbjct: 120 AQELEKAFMEK 130
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF DV L DY + ++ PMD TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 311 YAWPFYK--DVIPTSLLDYSDAMKHPMDLGTIRDKME--NGL-YKDTQDFASDVRLMFMN 365
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
KYN ++V MA+ L + FE
Sbjct: 366 CYKYNPPDNEVVNMARKLQDVFE 388
>gi|426020769|sp|F7DRV9.1|BRDT_XENTR RecName: Full=Bromodomain testis-specific protein
Length = 933
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 75 LKDRHV-ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
+ RH+ +SI + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 MSSRHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKL 62
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
L DYY++I+ PMD STI+ ++ + Y + D +F N YN DD+ VM
Sbjct: 63 NLPDYYQIIKNPMDLSTIRKRL---EYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVM 119
Query: 194 AKSLLEKFEEK 204
++ L + F EK
Sbjct: 120 SQELEKVFMEK 130
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +DVRL+F N
Sbjct: 302 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDVRLMFMN 356
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
+ KYN ++V MA+ + + FE
Sbjct: 357 SYKYNPPDNEVVNMARKMQDVFE 379
>gi|432876083|ref|XP_004072968.1| PREDICTED: bromodomain-containing protein 3-like [Oryzias latipes]
Length = 494
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY++VI+ PMD TIK ++
Sbjct: 30 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLCLWDYHKVIKNPMDMGTIKKRL-- 87
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 88 -ENNYYWSASEAMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 137
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
S + KMD + Y + + DVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 171 SILPKKMDKSE---YSDPQSFATDVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKI 227
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 1783 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 1837
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
+ R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 1838 QKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 1897
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 1898 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 1952
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 1953 AGHNMRKYFEKKW 1965
>gi|219118718|ref|XP_002180126.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408383|gb|EEC48317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1056
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
LK + + + + H+ W F PVD LGL DY+E+I+KPMD TI+ ++ + + Y
Sbjct: 175 LKSKCLDVLKGLMAHQHGWVFNGPVDPVELGLVDYFEIIKKPMDLGTIQKRL---ESSAY 231
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE--EKRQEE 221
++ + D+ L F+NAM YN++ V+ MAK L K E +L+ ++ E E+RQ E
Sbjct: 232 HSIDDFKTDIFLTFENAMVYNEDGSVVYDMAKQLKVKAESDMKRLVAQLETEDLERRQNE 291
>gi|327270741|ref|XP_003220147.1| PREDICTED: bromodomain testis-specific protein-like [Anolis
carolinensis]
Length = 900
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 95 EAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
+ GR +L+ + + + +H ++WPF PVD GL L DYY +I+ PMD +TI+ +
Sbjct: 66 QGTGRLTNQLQYLQKVVMKAMWRHSFSWPFHQPVDAAGLKLPDYYNIIKNPMDLTTIQKR 125
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ + Y E + + +F N YN DD+ MA+ L + F +K Q+
Sbjct: 126 L---EHNYYTCAAECIENFKTMFANCYLYNKPGDDIVFMAQELEKVFMQKIAQM 176
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 117 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
QH+ +AW F P+DV GL DY +V++ PMD TIK KM + Y++ +E AD+RL
Sbjct: 332 QHEAYAWLFYKPIDVTAPGLEDYNDVVKCPMDLGTIKKKM---ENNAYKDTQEFAADIRL 388
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+F N +Y+ +V MA+ L + FE + ++
Sbjct: 389 MFMNCYRYSSPDQEVVTMARKLQDVFEMHFAKI 421
>gi|119194171|ref|XP_001247689.1| hypothetical protein CIMG_01460 [Coccidioides immitis RS]
gi|392863070|gb|EAS36227.2| transcription regulator BDF1 [Coccidioides immitis RS]
Length = 806
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ +A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL
Sbjct: 471 HYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRL 526
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D + K L E F+ KW Q
Sbjct: 527 MFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R + LKR A F F PVD L + +Y +I++PMD T+++K+ K
Sbjct: 263 RTLAALKRTHDARF-----------FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKI--K 309
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
G Y+ V +I AD +L+ N + +N V V L + + E+ L LP E E
Sbjct: 310 SG-AYKTVDQITADFKLMIDNCITFNGPEHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|326923162|ref|XP_003207809.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Meleagris gallopavo]
Length = 2126
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + TS S+ K K R + S+ + +Q+ F + R + + I
Sbjct: 1972 TEDEDSATTSASLKRGKTDPKKRKMDESVSVSQGKQENFTAIKKPKRDDSKDLAICSMIL 2031
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y NV D
Sbjct: 2032 SELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLTSGQ---YPNVEAFSLD 2086
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
VRLVF N +N++ D+ ++ + FE+KW ++
Sbjct: 2087 VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2123
>gi|397579592|gb|EJK51267.1| hypothetical protein THAOC_29580 [Thalassiosira oceanica]
Length = 2323
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKN 179
A PF PVD + LGL+DY +I PMD T+K ++ +GK Y V ++ DVR ++KN
Sbjct: 31 AAPFRDPVDWKSLGLYDYPRIIRNPMDLGTVKRRLNEGK----YSTVYDVAEDVRRIWKN 86
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
KYN E D + + +S+ EKFEEK+ +L
Sbjct: 87 CCKYNPEDSDFNKLGRSMHEKFEEKYERL 115
>gi|448531883|ref|XP_003870352.1| Bdf1 transcription factor [Candida orthopsilosis Co 90-125]
gi|380354706|emb|CCG24222.1| Bdf1 transcription factor [Candida orthopsilosis]
Length = 730
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K++FAA R Q + + +PF+ PVD L L +Y+E++++PMD TI++K
Sbjct: 372 KKKFAAELRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHEIVKEPMDLGTIQSK 431
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
+ Y N E D+RL+F+N +N E DV++M L F++KW+
Sbjct: 432 L---TNNLYENADEFEKDIRLMFRNCYAFNPEGTDVNMMGHRLEAIFDKKWV 480
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ I + K A PF+ PVD L + YY I +PMD TI+ K+ + Y + ++
Sbjct: 213 IKAIKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLLTIERKI---NANAYEEISQVVD 269
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ N K+N E + MA ++ FE+ L + PK
Sbjct: 270 DFNLMVDNCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 309
>gi|303311489|ref|XP_003065756.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105418|gb|EER23611.1| Bromodomain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039630|gb|EFW21564.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 806
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ +A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL
Sbjct: 471 HYNFAAPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRL 526
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D + K L E F+ KW Q
Sbjct: 527 MFKNCYKFNIPGDPTYNAGKKLEEIFDYKWGQ 558
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R + LKR A F F PVD L + +Y +I++PMD T+++K+ K
Sbjct: 263 RTLAALKRTHDARF-----------FRVPVDPVKLNIPNYPTIIKEPMDLHTMEDKI--K 309
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
G Y+ V +I AD +L+ N + +N V V L + + E+ L LP E E
Sbjct: 310 SG-AYKMVDQITADFKLMIDNCITFNGPEHVVTVEGMRLRDNW-ERHLTKLPSPSEVE 365
>gi|62945212|dbj|BAD97681.1| open reading frame X [Mus musculus]
Length = 387
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 32 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEN 91
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 92 NY---YWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 139
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Query: 97 AGRR--MQELKRQFAAIFRQITQHK---WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
AG++ + E R +I R++ K +AWPF PVD E L LHDY+++I+ PMD ST+
Sbjct: 301 AGKKGKLSEHLRHCDSILREMLSKKHAAYAWPFYKPVDAEALELHDYHDIIKHPMDLSTV 360
Query: 152 K 152
K
Sbjct: 361 K 361
>gi|365761633|gb|EHN03272.1| Bdf2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 629
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I R + K + +PF+ PVD L L +Y+E+I+ P
Sbjct: 299 DIYENSKPKSKTLQKKFRTCLKILRILGSKKNSDINFPFLQPVDPIALNLPNYFEIIKNP 358
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ V + D+ LVF N ++N E ++VH+M K L E F
Sbjct: 359 MDLGTISNNLMNWK----YKTVDQFINDLNLVFLNCFQFNPEGNEVHLMGKKLKELFSVH 414
Query: 205 WLQ 207
WL+
Sbjct: 415 WLE 417
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF++PVD L + Y+ ++ PMD S I K+ + Y +V ++ +D R +
Sbjct: 145 KDAKPFLNPVDPIALNIPHYFNYVQTPMDLSLIGKKL---QESTYHSVEQVKSDFRTMVN 201
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-------EEKRQEEEEAKAQLDMQ 231
N + +N V +MAK + FE K + P+V+ R++ E++ + L ++
Sbjct: 202 NCLSFNGLESSVSLMAKRIQIYFERKLSAMPPRVLPASALKKTSRSRKKNEDSDSPLVIR 261
Query: 232 LTQEAVQTNKA 242
+ A N
Sbjct: 262 RSVSAANDNSG 272
>gi|218188757|gb|EEC71184.1| hypothetical protein OsI_03067 [Oryza sativa Indica Group]
Length = 264
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ W F PVD L L DYY I PMD T++ +++ + Y +
Sbjct: 59 LLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERR---CYADPWAFA 115
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN D V+ A L E FE W P V+ R + E K +L
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSVLAAPPRPPDAERKRRLSG 171
Query: 231 QLTQEAV 237
L + V
Sbjct: 172 LLPRLPV 178
>gi|330913598|ref|XP_003296313.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
gi|311331637|gb|EFQ95588.1| hypothetical protein PTT_05982 [Pyrenophora teres f. teres 0-1]
Length = 909
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 102 QELKRQFA-AIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
QELK F ++ ++ + K+ +PF+ PVD L + Y ++I+KPMDF TI+ +
Sbjct: 544 QELK--FCESVITELLKPKYTAVTYPFITPVDPVALNIPSYLKIIKKPMDFGTIEKNL-- 599
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K+G Y++ ++ YAD +LVF+N K+N E D V+ M L + FE W
Sbjct: 600 KNGV-YQSAKDFYADAQLVFQNCYKFNPEGDAVNQMGHKLEDLFESLW 646
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
F PVD LG+ +Y E+++ PMD ST+++K+ K Y VR+ AD+ + N+ +
Sbjct: 363 FKDPVDPHALGIPNYPEIVKHPMDLSTMESKLKEKK---YNYVRDFMADLDQMITNSELF 419
Query: 184 NDERDDVHVMAKSLLEKF 201
N+++ V +L F
Sbjct: 420 NNKQHPVTQAGYNLRAYF 437
>gi|325187425|emb|CCA21963.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 950
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+I +++ + A PF+ PVD LG+ DY++VI++PMD TI+ ++ Y + +
Sbjct: 408 SIIKRLMANSKAGPFLTPVDPVALGIPDYFKVIKEPMDLGTIRQNLESG---FYSDASIL 464
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
VRLVF NAM YN VH+ A+ L++ F
Sbjct: 465 IEHVRLVFSNAMLYNAAHSQVHIFAQKLMDDF 496
>gi|219118433|ref|XP_002179989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408246|gb|EEC48180.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1603
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
Q+LK + + + H+ AW F PVD LGL DY+EVI+KPMD TI+ K++ +G
Sbjct: 572 QKLKTKGLDALKTLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLE--NGV 629
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y+ + + V L F NAM YN E V+ MA + KF+ +++L+ ++ EE
Sbjct: 630 -YQRLDDFKEHVLLTFDNAMMYNPEGSVVYNMANEMKVKFQSDFVKLMEQLNAEE 683
>gi|444524033|gb|ELV13688.1| Epoxide hydrolase 3 [Tupaia chinensis]
Length = 941
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 3/106 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R+ +L+ + + + +H++AWPF PVD L L DYY++I+ PMD TIK ++
Sbjct: 58 RQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKSPMDMGTIKKRL--- 114
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y N +E D +F N YN DD+ +MA++L + F +K
Sbjct: 115 ENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQK 160
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 150 TIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K+K++ ++ YR+ +E ADVRL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 204 PVKSKLEARE---YRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 259
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 266 KCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSF-HATAQEVDLDMDAQSELTLW 324
KC+ MS EEK+ L + +L E L + + I+ PS ++ E+++D + TL
Sbjct: 399 KCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLR 458
Query: 325 RLKVFVQESLK 335
L+ +V L+
Sbjct: 459 ELERYVTSCLR 469
>gi|165970446|gb|AAI58274.1| LOC100144959 protein [Xenopus (Silurana) tropicalis]
Length = 476
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 75 LKDRHV-ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGL 133
+ RH+ +SI + + GR +L+ + + + +H ++WPF PVD L
Sbjct: 3 MSSRHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKL 62
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVM 193
L DYY++I+ PMD STI+ ++ + Y + D +F N YN DD+ VM
Sbjct: 63 NLPDYYQIIKNPMDLSTIRKRL---EYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVM 119
Query: 194 AKSLLEKFEEK 204
++ L + F EK
Sbjct: 120 SQELEKVFMEK 130
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 5/83 (6%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AWPF V L D + I+ PMD +TI++KM+ +G Y++ ++ +D+RL+F N
Sbjct: 312 YAWPFYK--TVIPTSLLDCSDAIKHPMDLATIRDKME--NGL-YKDTQDFASDIRLMFMN 366
Query: 180 AMKYNDERDDVHVMAKSLLEKFE 202
+ KYN ++V MA+ + + FE
Sbjct: 367 SYKYNPPDNEVVNMARKMQDVFE 389
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Oreochromis niloticus]
Length = 2378
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+
Sbjct: 2281 LLAELERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFI 2335
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DV LVF N K+N++ D+ ++ + FE++W +LL
Sbjct: 2336 IDVNLVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 2374
>gi|5262644|emb|CAB45759.1| hypothetical protein [Homo sapiens]
Length = 449
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 13/193 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +TS S+ + L
Sbjct: 260 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTSSSLKRGNKDL 314
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + SI +Q++F + R + + I ++ H+ AWPF+ PV+++
Sbjct: 315 KKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 374
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 375 VP--GYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALDVRLVFDNCETFNEDDSDIGR 429
Query: 193 MAKSLLEKFEEKW 205
++ + FE+KW
Sbjct: 430 AGHNMRKYFEKKW 442
>gi|168038855|ref|XP_001771915.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
gi|162676866|gb|EDQ63344.1| single bromodomain-containing protein [Physcomitrella patens subsp.
patens]
Length = 672
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
A ++I + K A PF PVD LG+ DY+EV+++PMD TI+++++ G Y V ++
Sbjct: 269 AALKRIMKMKEAGPFNKPVDPVKLGIPDYFEVVKRPMDLGTIRDRLE--KGEVYNTVDDV 326
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
+ DV LV+ N YND+ D + K+L F++ L
Sbjct: 327 FEDVALVWSNCRTYNDDGDPIMEFLKNLESTFQKLCL 363
>gi|354544706|emb|CCE41432.1| hypothetical protein CPAR2_304210 [Candida parapsilosis]
Length = 748
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 96/184 (52%), Gaps = 15/184 (8%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K++FAA R Q + + +PF+ PVD L L +Y++++++PMD TI++K
Sbjct: 382 KKKFAAELRFCNQTIKELMSKKHYNYNFPFLAPVDAVALNLPNYHDIVKEPMDLGTIQSK 441
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPKVM 213
+ Y N + DVRLVF+N +N E DV++M L F++KW+ + +P+
Sbjct: 442 L---TNNLYENADDFEKDVRLVFRNCYAFNPEGTDVNMMGHRLEAIFDKKWVNKPVPEPT 498
Query: 214 EEEKRQEEEEAKAQLDMQLTQEAVQTNKAKE-LRSELNEVDMQLENLRETVIQKCRKMST 272
+ +++ + + ++T+ + A + L ++L + +LE ++ ++K R+
Sbjct: 499 PQHSEASDDDFTSDEEEEITEAVLSEVPAIQFLENQLIRMKEELEKMKADHLKKLREQQA 558
Query: 273 EEKK 276
+K
Sbjct: 559 ARRK 562
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ I + K A PF+ PVD L + YY I +PMD STI+ K+ + Y ++ ++
Sbjct: 220 IKAIKRLKDAVPFLAPVDTVKLNVPFYYNYIPRPMDLSTIERKI---NANAYEDIAQVVD 276
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ +N K+N E + MA ++ FE+ L + PK
Sbjct: 277 DFNLMVENCKKFNGEAAGISKMATNIQAHFEKHMLNVPPK 316
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Anolis carolinensis]
Length = 2184
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 16/140 (11%)
Query: 70 IAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVD 129
I+ LK V+ ++K ++D ++AA M + ++ H+ AWPF+ PV+
Sbjct: 2058 ISASPLKQESVSPVKKAKRD--ESKDAAISSM---------LLSELETHEDAWPFLLPVN 2106
Query: 130 VEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDD 189
++ + Y +VI+KPMDFSTI+ K++ Y N+ DVRLVF N +N++ D
Sbjct: 2107 LKHV--PGYRKVIKKPMDFSTIREKLNSGQ---YPNLEAFAVDVRLVFDNCETFNEDDSD 2161
Query: 190 VHVMAKSLLEKFEEKWLQLL 209
+ ++ + FE+KW ++
Sbjct: 2162 IGRAGHNMRKHFEKKWTEIF 2181
>gi|226485709|emb|CAX75274.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 612
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K +++ R + R+ E + + I + I+ ++ F+ PVDV LGLHDYY
Sbjct: 159 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 218
Query: 140 EVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD STI+ K++ G+ T Y + DVRL+F N KYN E +V + K L
Sbjct: 219 DVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYKYNGEDSEVARVGKQLQ 274
Query: 199 EKFEEKWLQL 208
F+E + ++
Sbjct: 275 TIFDENFAKV 284
>gi|259090118|pdb|2WP2|A Chain A, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide.
gi|259090119|pdb|2WP2|B Chain B, Structure Of Brdt Bromodomain Bd1 Bound To A Diacetylated
Histone H4 Peptide
Length = 120
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
+GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 8 SGRLTNQLQFLQRVVLKALWKHGFSWPFQQPVDAVKLKLPDYYTIIKTPMDLNTIKKRLE 67
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ VMA++L + F +K Q+
Sbjct: 68 NK---YYEKASECIEDFNTMFSNCYLYNKTGDDIVVMAQALEKLFMQKLSQM 116
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 56 TKDNNQPNTSKSISIAKEKLKDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIF 112
T+D + +TS S+ + LK R + SI +Q++F + R + + I
Sbjct: 1977 TEDEDSASTSSSLKRGNKDLKKRKMEENTSINLSKQESFTSVKKPKRDDSKDLALCSMIL 2036
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+ D
Sbjct: 2037 TEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFALD 2091
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
VRLVF N +N++ D+ ++ + FE+KW
Sbjct: 2092 VRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2124
>gi|440789954|gb|ELR11245.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 119
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + +H++AWPF HPVD LG+ DY +I++PMD +TI++K++ GT Y V
Sbjct: 9 LLTNLARHRYAWPFAHPVDYVALGVPDYPMIIQRPMDLATIRDKLEA--GT-YELVSAFL 65
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSL 197
DV+LV+ NA YN DV +MA ++
Sbjct: 66 DDVQLVWSNAKVYNPPGSDVVIMADAM 92
>gi|397640630|gb|EJK74224.1| hypothetical protein THAOC_04109 [Thalassiosira oceanica]
Length = 824
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 108 FAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
+ + R++ +H+ W F VD LGL DY++VIE PMD S ++ K+ K G Y++
Sbjct: 724 YFPLVRKMIEHENGWLFKDAVDPVELGLVDYFDVIETPMDLSLVEKKL--KQGC-YKSEA 780
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
+DV+LVF NA+ +N E DV V+AK +L F + L+
Sbjct: 781 MFESDVKLVFNNAIVFNGEESDVGVIAKEMLGLFSSHFKNLI 822
>gi|403214547|emb|CCK69048.1| hypothetical protein KNAG_0B06180 [Kazachstania naganishii CBS
8797]
Length = 654
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
+++Q+ + ++ +++T K+A +PF+ PVD + L Y++ +++PMD TI K
Sbjct: 282 SKKLQQAMKYCVSVVKELTNKKYASFNYPFLEPVDPVSMNLPTYFDYVKEPMDLGTISKK 341
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ + Y+ + E AD+RLVFKN +N + V++M L E F KW
Sbjct: 342 LSNWE---YQTMEEFEADIRLVFKNCYSFNPDGTIVNMMGHRLEEVFNSKW 389
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 105 KRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 164
KR + + + K A PF+ PVD L L Y+ I++PMD ST++ K+ + Y
Sbjct: 120 KRHALLAIKAVKRLKDAKPFLQPVDTVALNLPLYFNYIKRPMDLSTVERKL---NLNAYE 176
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL----LPKVMEEEKRQE 220
+ D L+ N +K+N + MA+++ FE+ L + P ++++ K ++
Sbjct: 177 TPESVTEDFNLMVDNCVKFNGPASAIAQMARNIQASFEKHMLNMPAKDAPVIIQQNKSRK 236
Query: 221 EEEAKAQLDMQLTQEAVQTNKAKELR 246
+++ D + QT+ + R
Sbjct: 237 KKKGGEDEDTPVVIRRAQTHSGRPKR 262
>gi|47210344|emb|CAF96012.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ +AWPF PVDV LGLHDY+++I++PMD STI+ KMD + E ADV+L+
Sbjct: 183 HYAYAWPFYVPVDVVALGLHDYHDIIKQPMDLSTIRKKMDQGEYA---EAAEFAADVQLM 239
Query: 177 FKNAMKYNDERDDVHVMAKSL 197
F N KYN +V MA+ L
Sbjct: 240 FSNCYKYNPPSHEVVHMARKL 260
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L + + + +H ++WPF PVD LGL DYY VI PMD STI ++
Sbjct: 18 GRATNQLSYLERVVIKALWRHPFSWPFQQPVDAVALGLLDYYTVITNPMDLSTITKRLKN 77
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYND 185
K Y E D+ +F N YN+
Sbjct: 78 K---YYWQASECIQDLNTMFSNCYAYNE 102
>gi|258567404|ref|XP_002584446.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905892|gb|EEP80293.1| predicted protein [Uncinocarpus reesii 1704]
Length = 807
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKN 179
A PF PVD L + Y+ +I+KPMD STI+ K+ TG Y N +E+ DVRL+F+N
Sbjct: 477 ASPFYQPVDPVALNIPTYHNIIKKPMDLSTIRTKLQ----TGQYENSKEMENDVRLMFRN 532
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
K+N D + K L E F+ KW Q
Sbjct: 533 CYKFNIPGDPTYNAGKKLEEIFDSKWAQ 560
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R + LKR A F F PVD L + +Y +I+ PMD T++ K+ K
Sbjct: 265 RTLAALKRTHDARF-----------FRTPVDPVKLNIPNYPLIIKHPMDMHTMEEKV--K 311
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
G Y+ E+ AD L+ N + +N HV+ L + +E W + L K+
Sbjct: 312 HG-AYKTADEVIADFNLIVDNCVTFNGPE---HVVTIECL-RLKENWERHLAKL 360
>gi|226485705|emb|CAX75272.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K +++ R + R+ E + + I + I+ ++ F+ PVDV LGLHDYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD STI+ K++ G+ T Y + DVRL+F N KYN E +V + K L
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYKYNGEDSEVARVGKQLQ 347
Query: 199 EKFEEKWLQL 208
F+E + ++
Sbjct: 348 TIFDENFAKV 357
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
H + +++ +K++ + ++ + K WPF PVD + L L DY ++I+ PMD TI
Sbjct: 23 HSSKITTNQLEYIKKE---VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTI 79
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW------ 205
K +++ K Y + E D+ +F+N +N DDV MA L + E+
Sbjct: 80 KQRLNLK---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTP 136
Query: 206 -LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
+L P+ + R + M+ A N + L VD R +V
Sbjct: 137 ETELCPQKTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|371927839|pdb|4A9E|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927840|pdb|4A9E|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927841|pdb|4A9E|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927842|pdb|4A9F|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927843|pdb|4A9F|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927844|pdb|4A9F|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-Methylpyrrolidin-2-One
gi|371927869|pdb|4A9H|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927870|pdb|4A9H|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927871|pdb|4A9H|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
1-(2-Methyl-1,2,3, 4-Tetrahydroquinolin-1-Yl)ethan-1-One
gi|371927872|pdb|4A9I|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927873|pdb|4A9I|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927874|pdb|4A9I|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
3-Methyl-1,2,3,4- Tetrahydroquinazolin-2-One
gi|371927875|pdb|4A9J|A Chain A, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927876|pdb|4A9J|B Chain B, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|371927877|pdb|4A9J|C Chain C, N-Terminal Bromodomain Of Human Brd2 With N-(4-
Hydroxyphenyl)acetamide
gi|374977910|pdb|4A9M|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977911|pdb|4A9M|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977912|pdb|4A9M|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopentyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977913|pdb|4A9N|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977914|pdb|4A9N|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977915|pdb|4A9N|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
N-Cyclopropyl-5-(
3,5-Dimethyl-1,2-Oxazol-4-Yl)-2-Methylbenzene-1-
Sulfonamide
gi|374977916|pdb|4A9O|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977917|pdb|4A9O|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|374977918|pdb|4A9O|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 5
Ethyl-3-Methyl- 4-Phenyl-1,2-Oxazole
gi|383875671|pdb|4ALH|A Chain A, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875672|pdb|4ALH|B Chain B, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|383875673|pdb|4ALH|C Chain C, N-Terminal Bromodomain Of Human Brd2 With 3,5 Dimethyl-4-
Phenyl-1,2-Oxazole
gi|393715366|pdb|4ALG|A Chain A, N-Terminal Bromodomain Of Human Brd2 With Ibet-151
Length = 154
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK ++
Sbjct: 27 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRL-- 84
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 85 -ENNYYWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 130
>gi|226485707|emb|CAX75273.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 685
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K +++ R + R+ E + + I + I+ ++ F+ PVDV LGLHDYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD STI+ K++ G+ T Y + DVRL+F N KYN E +V + K L
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYKYNGEDSEVARVGKQLQ 347
Query: 199 EKFEEKWLQL 208
F+E + ++
Sbjct: 348 TIFDENFAKV 357
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
H + +++ +K++ + ++ + K WPF PVD + L L DY ++I+ PMD TI
Sbjct: 23 HSSKITTNQLEYIKKE---VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTI 79
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW------ 205
K +++ K Y + E D+ +F+N +N DDV MA L + E+
Sbjct: 80 KQRLNLK---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTP 136
Query: 206 -LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
+L P+ + R + M+ A N + L VD R +V
Sbjct: 137 ETELCPQKTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|340707459|pdb|2YDW|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707460|pdb|2YDW|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707461|pdb|2YDW|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gw841819x
gi|340707481|pdb|2YEK|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707482|pdb|2YEK|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|340707483|pdb|2YEK|C Chain C, Crystal Structure Of The First Bromodomain Of Human Brd2
With The Inhibitor Gsk525762 (Ibet)
gi|393715359|pdb|4AKN|A Chain A, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715360|pdb|4AKN|B Chain B, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
gi|393715361|pdb|4AKN|C Chain C, N-Terminal Bromodomain Of Human Brd2 With
Tbutyl-Phenyl-Amino-
Dimethyl-Oxazolyl-Quinoline-Carboxylic Acid
Length = 153
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H++AWPF PVD LGL DY+++I++PMD TIK +++
Sbjct: 27 GRVTNQLQYLHKVVMKALWKHQFAWPFRQPVDAVKLGLPDYHKIIKQPMDMGTIKRRLEN 86
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y E D +F N YN DD+ +MA++L + F +K
Sbjct: 87 NY---YWAASECMQDFNTMFTNCYIYNKPTDDIVLMAQTLEKIFLQK 130
>gi|323448923|gb|EGB04816.1| hypothetical protein AURANDRAFT_72433 [Aureococcus anophagefferens]
Length = 1616
Score = 75.5 bits (184), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + + K A F+ PVD E +G DY ++ PMDF T+K K+D D T V
Sbjct: 640 VLEYLMRTKQAEWFLEPVDPEVMGNDDYPTIVAAPMDFGTVKAKLDAGDYT----VHTFA 695
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 214
ADVRLVF+NAM +N E DDVH A L KFE+++ L V +
Sbjct: 696 ADVRLVFRNAMTFNVEGDDVHEAALWLDVKFEKRYADALAGVFD 739
>gi|297797327|ref|XP_002866548.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312383|gb|EFH42807.1| DNA-binding bromodomain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 486
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 15/177 (8%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+ ++ HK W F PVD L + DY+ VI+ PMD TI++++ + Y + +
Sbjct: 176 TLLNRLWSHKLGWAFRTPVDPVMLNIPDYFTVIKHPMDLGTIRSRLRKGE---YSSPLDF 232
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLD 229
ADVRL F N++ YN + H MA+ + + FE W + K+ + + A L+
Sbjct: 233 AADVRLTFSNSIAYNPPGNQFHTMAQGISKYFETGWKSIEKKIPVTKPPVIPLTSSASLE 292
Query: 230 MQLTQE-AVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRL 285
++ E A NK+ + +NE +++E + M+ +EKK L L L
Sbjct: 293 SEIPFEVAPLRNKS----AAMNESKLRVEPAKLV-------MTDDEKKKLSQDLVAL 338
>gi|357144694|ref|XP_003573382.1| PREDICTED: transcription factor GTE10-like [Brachypodium
distachyon]
Length = 488
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 101/237 (42%), Gaps = 15/237 (6%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
++++ A I +I + + + F PVDVE L LHDY+ VI PMD T+K + G
Sbjct: 132 MRKRCAQILTKIRKQRNSVWFNKPVDVERLKLHDYHAVIRNPMDLGTVKENLTA----GR 187
Query: 164 RNVREIYA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
+ E +A DVRL F NA++YN VH A SLL FE + + + +E + E
Sbjct: 188 YHSHEAFADDVRLTFNNALRYNPVGHQVHRSAGSLLASFEGMYGEAVSWFEQECEHFEPM 247
Query: 223 EAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKC---------RKMSTE 273
+ L +Q E R ++ R+MS E
Sbjct: 248 QLALPPPPMLALPPPPQPLVPVPVRVSPVPRLQ-EPPRMGPGRRPKPKAREPNKREMSDE 306
Query: 274 EKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFV 330
EK L + L E + L+IV + + + V+LD D TLW L FV
Sbjct: 307 EKHKLRVEIENLPEEKMENVLQIVQKRSSDPALMGEVVELDFDEMDVDTLWELDRFV 363
>gi|303275083|ref|XP_003056841.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
gi|226461193|gb|EEH58486.1| bromodomain-containing protein [Micromonas pusilla CCMP1545]
Length = 854
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK-DGTGYRNVREIYADVRLVFKNAMK 182
F PVD +GL DY+++I+ PMDF T+K ++D K GT Y + E Y DV L N
Sbjct: 266 FAMPVDPMKMGLPDYFDIIKNPMDFGTVKQRLDSKAAGTAYDHPMEFYRDVTLTLDNCRL 325
Query: 183 YNDERDDVHVMAKSLLEKFEEKW----LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQ 238
YN V M +S+ FE+ W L+ +E + EE A+ D + +E ++
Sbjct: 326 YNKADSVVGTMGESVRADFEKHWAAAELEAKAADEDEYRASEEAIIAAEPDDPVEEEVLE 385
Query: 239 TNK-AKELRSELNEVDMQLENLR 260
+K E+ +L EV QLE +
Sbjct: 386 ESKQVSEINRQLAEVQRQLEEFK 408
>gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
Length = 1877
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 168 KYGIPFLRPVDPNMDGASDYYAVIMRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 224
Query: 179 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQ 227
N +YN D+HV + K+L +K +W L + E+ +Q+ EE+ ++
Sbjct: 225 NCFQYNSVDSDIHVQGRLMKALFDKLYGEWALLSRQTQEDLVKQKSEESPSE 276
>gi|226485711|emb|CAX75275.1| bromodomain containing 2 [Schistosoma japonicum]
Length = 694
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 83 IEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYY 139
I+K +++ R + R+ E + + I + I+ ++ F+ PVDV LGLHDYY
Sbjct: 232 IKKPKREYEERNVSKRLRLSEALKACSNILKDISSQRYRDLNHFFLKPVDVVALGLHDYY 291
Query: 140 EVIEKPMDFSTIKNKMD-GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
+V++K MD STI+ K++ G+ T Y + DVRL+F N KYN E +V + K L
Sbjct: 292 DVVKKAMDLSTIRTKLESGQYHTKY----DFADDVRLMFNNCYKYNGEDSEVARVGKQLQ 347
Query: 199 EKFEEKWLQL 208
F+E + ++
Sbjct: 348 TIFDENFAKV 357
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 13/179 (7%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
H + +++ +K++ + ++ + K WPF PVD + L L DY ++I+ PMD TI
Sbjct: 23 HSSKITTNQLEYIKKE---VVGRLFKEKIVWPFTKPVDHQRLNLPDYPKIIKHPMDLGTI 79
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW------ 205
K +++ K Y + E D+ +F+N +N DDV MA L + E+
Sbjct: 80 KQRLNLK---FYHSSSECLDDLFTMFRNCYIFNKPGDDVVAMAMKLEQIARERLKFMPTP 136
Query: 206 -LQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETV 263
+L P+ + R + M+ A N + L VD R +V
Sbjct: 137 ETELCPQKTPKSTRPIATPMQIHPPMESIHPAASVNHTEGLNGSAVSVDQTTLPFRPSV 195
>gi|410912905|ref|XP_003969929.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Takifugu rubripes]
Length = 2168
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+
Sbjct: 2071 LLAELERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFI 2125
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DV LVF N ++N++ D+ ++ + FE++W +LL
Sbjct: 2126 IDVNLVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELL 2164
>gi|148922865|ref|NP_001092209.1| uncharacterized protein LOC561095 [Danio rerio]
gi|148744757|gb|AAI42905.1| Zgc:165617 protein [Danio rerio]
Length = 445
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ AWPF++PV+++ + Y +VI+KPMDFSTI+ K+ + Y+N+
Sbjct: 348 LLAELERHQDAWPFLNPVNLKSV--PGYRKVIKKPMDFSTIREKLVS---SQYQNLETFI 402
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DV LVF N K+N++ D+ ++ + FE++W +LL
Sbjct: 403 IDVNLVFDNCEKFNEDNSDIGRAGHNMRKFFEKRWTELL 441
>gi|268564300|ref|XP_002639068.1| C. briggsae CBR-TAG-332 protein [Caenorhabditis briggsae]
Length = 747
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+AW F PVD +GLHDY+ +I+ PMD TIK K++ Y+ E +D+RL+ N
Sbjct: 271 FAWVFYEPVDAATMGLHDYHNIIKHPMDMKTIKKKLEAGQ---YKEPAEFESDIRLMINN 327
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
+ YN D V+ E F +KW +L+
Sbjct: 328 CLTYNPVGDPVNSFGLRFQEVFNKKWSELV 357
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +L + ++ +HK WPF PVD L + Y+E I +PMD TI++++
Sbjct: 39 RHTNKLDYIMTVVLKEAAKHKHVWPFQKPVDAHTLCIPLYHERITRPMDLKTIESRL--- 95
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
Y + +E D+ VF+N +N + DDV +MA+++ E ++ K +E+ R
Sbjct: 96 KSVYYTSAQECIDDIEQVFQNCYMFNGKEDDVTIMAQNVHE--------VIKKSLEQAPR 147
Query: 219 QEEE 222
E E
Sbjct: 148 DEHE 151
>gi|396464495|ref|XP_003836858.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
gi|312213411|emb|CBX93493.1| similar to bromodomain containing protein [Leptosphaeria maculans
JN3]
Length = 907
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 99 RRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
++ Q+ R ++ ++ + K++ +PF PVD L + Y ++I+KPMDF TI+ +
Sbjct: 540 KKYQQELRFCESVMTELMKPKYSAITFPFTSPVDPVALNIPSYLKIIKKPMDFGTIERNL 599
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
K+G Y++ ++ YAD +LVF+N K+N E D V+ M L + FE W
Sbjct: 600 --KNGL-YQSAKDFYADAQLVFQNCYKFNPEGDAVNKMGHQLEDLFESLW 646
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
R + K + F PV+ LG+ Y E+++ PMD ST+++K+ K Y NVRE A
Sbjct: 350 IRNTKKIKVSLAFKDPVNPVLLGIPTYPEIVKHPMDLSTMEHKLKDKK---YNNVREFMA 406
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
D+ + +N+ +N++ V +L F
Sbjct: 407 DLDQMIENSELFNNKHHPVTQAGYNLRAYF 436
>gi|159795469|pdb|2RFJ|A Chain A, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795470|pdb|2RFJ|B Chain B, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|159795471|pdb|2RFJ|C Chain C, Crystal Structure Of The Bromo Domain 1 In Human
Bromodomain Containing Protein, Testis Specific (Brdt)
gi|394986421|pdb|4FLP|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
gi|394986422|pdb|4FLP|B Chain B, Crystal Structure Of The First Bromodomain Of Human Brdt
In Complex With The Inhibitor Jq1
Length = 119
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +L+ + + + +H ++WPF PVD L L DYY +I+ PMD +TIK +++
Sbjct: 8 GRLTNQLQYLQKVVLKDLWKHSFSWPFQRPVDAVKLQLPDYYTIIKNPMDLNTIKKRLEN 67
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
K Y E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 68 K---YYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALEKLFMQKLSQM 115
>gi|195025255|ref|XP_001986029.1| GH20765 [Drosophila grimshawi]
gi|193902029|gb|EDW00896.1| GH20765 [Drosophila grimshawi]
Length = 532
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 78 RHVASIEKQQQDAFHREEAAGR---RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLG 134
RH +++ + Q D GR +M +K+ F R++ Q ++A FM PVD E L
Sbjct: 10 RH-STVRRVQPDVMPLCGKVGRYTNKMHYIKKYF---LRELQQQQFAIDFMKPVDTELLN 65
Query: 135 LHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMA 194
+ YY VI++PMD TI ++D + Y+ V E+ DV+L+ N +N R D HV
Sbjct: 66 VPTYYNVIKRPMDLGTIIQRLDNR---YYQTVDELIDDVKLIIYNCYTFN--RPDAHVYR 120
Query: 195 KS-LLEKFEEKWLQLLP---KVMEEEKRQEEEEAKAQLDMQL 232
LE F + L LP +V+ + R E+ K Q + +L
Sbjct: 121 NCQRLETFLQNVLAKLPGGEEVLSTKGRCEKSVCKRQCNQRL 162
>gi|402218827|gb|EJT98902.1| Bromodomain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 824
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+F++ + + A+PF PVD L + DY ++I+KPMD ST+K K++ K Y N +E +
Sbjct: 452 LFKK-SYYSAAYPFYDPVDYVALNIPDYPKIIKKPMDLSTMKKKLESKT---YENAQEFH 507
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
AD +L+ KN YN + V + L F+EKW L P
Sbjct: 508 ADFKLMIKNCRLYNPAQSPVREAGEELNRIFDEKWKGLPP 547
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 16/118 (13%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM--------DGKDG 160
AA RQ+ +++ A PF+ PVD GL + Y+ VI+ PMD T++ K+ + G
Sbjct: 223 AATIRQLKKNRDAAPFLKPVDTVGLNIPHYHNVIKHPMDLGTVEEKLALSNPAVKSKQSG 282
Query: 161 TG--------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ Y E ADVRL+ NA+K+N E V MAK LLE F+++ ++ P
Sbjct: 283 SATESDPSKRYWTADEFVADVRLIVDNAIKFNGEAHVVSQMAKRLLEIFDKQAERMPP 340
>gi|224013794|ref|XP_002296561.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968913|gb|EED87257.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 89
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + ++ H W F PVD LGL DY+EVI+ PMD T+K +++ +G YR++ E+
Sbjct: 2 LLKGLSNHNHGWVFNSPVDPVELGLPDYFEVIKNPMDLGTVKKRLE--NGL-YRSINEVE 58
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
D+ L F NAM YN E V MAK L +KF
Sbjct: 59 VDINLTFDNAMLYNPEGSVVWSMAKELKDKF 89
>gi|47230592|emb|CAF99785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1679
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y+N+
Sbjct: 1585 LLAELERHQDAWPFLTPVNLKSV--PGYRKVIKKPMDFSTIREKLVSSQ---YQNLETFI 1639
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DV LVF N ++N++ D+ ++ + FE++W +LL
Sbjct: 1640 IDVNLVFDNCERFNEDNSDIGRAGHNMRKFFEKRWTELL 1678
>gi|169624656|ref|XP_001805733.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
gi|111055843|gb|EAT76963.1| hypothetical protein SNOG_15588 [Phaeosphaeria nodorum SN15]
Length = 906
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 12/102 (11%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
LK ++AA+ ++PF+ PVD L + Y ++I+KPMDF TI+ + K G Y
Sbjct: 556 LKPKYAAV---------SYPFVSPVDPVALNIPSYLKIIKKPMDFGTIEKNL--KAGM-Y 603
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
++ ++ +AD LVF+N K+N E D V+ M L + FE+ W
Sbjct: 604 QSAKDFHADAHLVFQNCYKFNPEGDAVNKMGHDLEDIFEKLW 645
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
R + K + F PVD L + Y E+++KPMD ST++NK+ Y VRE A
Sbjct: 350 IRNTKKIKVSLAFKDPVDHIALNIPTYPELVKKPMDLSTMENKLKENK---YTYVREFMA 406
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAK 225
D+ + +N+ +N+++ V +L F K + +P+ E+ ++ +AK
Sbjct: 407 DLDQMIENSELFNNKQHPVTQAGYNLRAYF-LKGMGKMPRGSSAEEPPKQVKAK 459
>gi|355671954|gb|AER94962.1| bromodomain adjacent to zinc finger domain, 2B [Mustela putorius
furo]
Length = 950
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 16 LGKAEGDTVEVEGLNKTIDDILQKVTQLEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKL 75
+ KA G T++++ L+ + K T +K V T+D + +T+ S+ + L
Sbjct: 762 IAKASGQTLKIKKLH-----VKGKKTNESKKGKKVTLTGDTEDEDSASTNSSLKRGSKDL 816
Query: 76 KDRHV---ASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEG 132
K R + S+ +Q++ + R + + I ++ H+ AWPF+ PV+++
Sbjct: 817 KKRKMEENTSVNLSKQESSTSVKKPKRDDSKDLALCSMILTEMETHEDAWPFLLPVNLKL 876
Query: 133 LGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV 192
+ Y +VI+KPMDFSTI+ K+ Y N+ DVRLVF N +N++ D+
Sbjct: 877 V--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFAVDVRLVFDNCETFNEDDSDIGR 931
Query: 193 MAKSLLEKFEEKWLQLL 209
S+ + FE+KW +
Sbjct: 932 AGHSMRKYFEKKWTDIF 948
>gi|224007327|ref|XP_002292623.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
gi|220971485|gb|EED89819.1| hypothetical protein THAPSDRAFT_269496 [Thalassiosira pseudonana
CCMP1335]
Length = 865
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
+ R+ + R++ H+ W F PVD LG+ DY+++++ PMD + ++ K++ +G Y
Sbjct: 50 ITRKCLPLVRKLYNHEHGWVFKDPVDPVELGIPDYFDIVQHPMDLALVETKLE--NGV-Y 106
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
+++ D +LVF+NA+ +N E++DV MAK LL F+E
Sbjct: 107 KDLDSFERDTKLVFENAILFNGEKNDVGGMAKQLLFMFDE 146
>gi|185177636|pdb|2YW5|A Chain A, Solution Structure Of The Bromodomain From Human
Bromodomain Containing Protein 3
Length = 138
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 15 PGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL- 73
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 74 --ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 123
>gi|426225993|ref|XP_004007141.1| PREDICTED: uncharacterized protein LOC101109872 [Ovis aries]
Length = 589
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK +++
Sbjct: 33 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLEN 92
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 93 NY---YWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 140
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ KMD ++ Y + + AD+RL+F N KYN +V MA+ L + FE ++ ++
Sbjct: 330 CVLQKKMDSRE---YPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKLQDVFEMRFAKM 386
>gi|24659254|ref|NP_726307.1| CG30417 [Drosophila melanogaster]
gi|7291557|gb|AAF46981.1| CG30417 [Drosophila melanogaster]
gi|66571202|gb|AAY51566.1| IP01291p [Drosophila melanogaster]
gi|220943344|gb|ACL84215.1| CG30417-PA [synthetic construct]
gi|220953316|gb|ACL89201.1| CG30417-PA [synthetic construct]
Length = 268
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
+KR F++ ++ I AW F P+D + LGLHDY+E++ +PMD ST++++++ TG
Sbjct: 21 IKRLFSSTYKNI-----AWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN----TGC 71
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + + D+RL+F N Y + + MAK L FEE + Q+
Sbjct: 72 YLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 117
>gi|68478269|ref|XP_716876.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
gi|68478390|ref|XP_716816.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438500|gb|EAK97830.1| hypothetical protein CaO19.978 [Candida albicans SC5314]
gi|46438562|gb|EAK97891.1| hypothetical protein CaO19.8593 [Candida albicans SC5314]
Length = 732
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ + +PF+ PVD L + +Y E++++PMD TI++K+ + Y N + DVRLV
Sbjct: 404 HYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNE---YENADDFEKDVRLV 460
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPK-------VMEEEKRQEEEEAKAQL 228
FKN +N E DV++M L F++KW + +P+ V + E EEE+
Sbjct: 461 FKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSSEEEDNVEIS 520
Query: 229 DMQLTQ-EAVQT--NKAKELRSELNEVDMQ-LENLRE 261
+ L++ A+Q N+ +R EL+E+ + L+ LRE
Sbjct: 521 EAMLSEIPAIQVMENQIIRMRKELDELKKEHLKKLRE 557
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y +V ++
Sbjct: 222 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYEDVSQVVD 278
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 279 DFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 318
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 2075 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFA 2129
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DVRLVF N +N++ D+ S+ + FE+KW +
Sbjct: 2130 VDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKWTDIF 2168
>gi|344231353|gb|EGV63235.1| Bromodomain-containing protein [Candida tenuis ATCC 10573]
Length = 503
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K++FAA R Q + +PF+ PVD L + +Y ++I++PMD STI++K
Sbjct: 178 KKKFAADLRFCNQILKDLISKKHFSYNFPFLQPVDAVALNIPNYSDIIKQPMDLSTIQSK 237
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
+ Y N E +DV L+F+N K+N E DV +M L + F++KW+
Sbjct: 238 LAN---NQYENGDEFESDVTLMFENCYKFNPEGTDVSMMGHKLQDIFQKKWI 286
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
+ + + K A PF+ PVD+ L + YY + KPMD STI+ K+ + Y + D
Sbjct: 34 KNVKRLKDAGPFLKPVDIIKLNIPFYYNFVPKPMDLSTIEKKL---TVSAYEVPEQFIDD 90
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL 232
L+ N +K+N E + M K++ FE+ L PK E + + +K +++ Q
Sbjct: 91 FNLMVSNCIKFNGENSPIAKMGKNIQAYFEKHMLNFPPK--EANESELSTASKRRIESQS 148
Query: 233 TQEAVQTNKAK 243
+ ++ +N+ K
Sbjct: 149 SVPSIASNRPK 159
>gi|50413693|ref|XP_457302.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
gi|49652967|emb|CAG85306.1| DEHA2B07964p [Debaryomyces hansenii CBS767]
Length = 639
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 13/112 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K+++AA R Q + + +PF+ PVD L + +Y EV+++PMD TI+ K
Sbjct: 307 KKKYAAELRFCNQTVKELISKKHYNYNFPFLAPVDTVALNIPNYAEVVKEPMDLGTIQTK 366
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
+ Y N E DVRLVFKN +N E DV++M L F++KW+
Sbjct: 367 LANNQ---YENGDEFERDVRLVFKNCYAFNPEGTDVNMMGHRLESIFDKKWV 415
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 101 MQELKRQFAA-IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
M + + +FA + + + + + A PF+HPVD+ L + YY I +PMD STI+ K+ +
Sbjct: 145 MPKHQAKFAINVIKAVKRLRDAGPFVHPVDIVKLNIPFYYNYIPRPMDLSTIERKI---N 201
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
Y I D L+ N K+N E+ + MAK++ FE+ L + PKV+
Sbjct: 202 ANAYEEPSRIVEDFNLMVANCCKFNGEQSGISKMAKNVQAHFEKHMLNMPPKVL 255
>gi|429242322|ref|NP_593620.3| bromodomain protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|391358177|sp|Q9HGP4.3|YK82_SCHPO RecName: Full=Bromodomain-containing protein C631.02
gi|347834104|emb|CAC05484.3| bromodomain protein (predicted) [Schizosaccharomyces pombe]
Length = 727
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 26/178 (14%)
Query: 43 LEQKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRR-- 100
E++L + Y+T + +S++ K + R +Q A + ++G R
Sbjct: 328 FERQLKQLPSAYVTSYSRPGRRPRSMTAPKGGARTR--------RQAAMYSNSSSGIRET 379
Query: 101 MQELK---RQFAA-------IFRQIT--QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMD 147
M +LK R+ AA + +++ QH+ +A+PF PV+ G DY++VI+ PMD
Sbjct: 380 MYDLKPHRRKDAAEMKFCQSVLKELLKKQHEAYAYPFYKPVNPTACGCPDYFKVIKHPMD 439
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
T++NK++ + Y +++ AD+ L+FKN K+N VH+M K L F++ W
Sbjct: 440 LGTMQNKLNHNE---YASMKAFEADMVLMFKNCYKFNSAGTPVHLMGKKLESIFQKLW 494
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+E + A+ RQ+ + + + PF PVD + DY +I+ P+D T++ K G
Sbjct: 232 KEQHKYIHAMLRQLRRGRDSIPFRAPVDPVKQNIPDYPTIIKNPIDLGTMQKKFSS--GV 289
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + + D+ L+F N YN V VM K+L FE + QL
Sbjct: 290 -YSSAQHFIDDMNLMFSNCFLYNGTESPVGVMGKNLQATFERQLKQL 335
>gi|238882433|gb|EEQ46071.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 709
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 86/157 (54%), Gaps = 15/157 (9%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ + +PF+ PVD L + +Y E++++PMD TI++K+ + Y N + DVRLV
Sbjct: 381 HYNYNFPFLAPVDTVALNIPNYNEIVKQPMDLGTIQSKLANNE---YENADDFEKDVRLV 437
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWL-QLLPK-------VMEEEKRQEEEEAKAQL 228
FKN +N E DV++M L F++KW + +P+ V + E EEE+
Sbjct: 438 FKNCYLFNPEGTDVNMMGHRLEAVFDKKWANKPVPEPTPQNSDVSDREYSSEEEDNVEIS 497
Query: 229 DMQLTQ-EAVQT--NKAKELRSELNEVDMQ-LENLRE 261
+ L++ A+Q N+ +R EL+E+ + L+ LRE
Sbjct: 498 EAMLSEIPAIQVMENQIIRMRKELDELKKEHLKKLRE 534
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y +V ++
Sbjct: 199 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYEDVSQVVD 255
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 256 DFNLMVKNCKKFNGEAAGISKMATNIQAQFEKLMVKVPPK 295
>gi|333360985|pdb|2L5E|A Chain A, Complex Between Bd1 Of Brd3 And Gata-1 C-Tail
Length = 128
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 14 GRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL-- 71
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 72 -ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 121
>gi|323448819|gb|EGB04713.1| hypothetical protein AURANDRAFT_17164, partial [Aureococcus
anophagefferens]
Length = 88
Score = 74.3 bits (181), Expect = 9e-11, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +++ H+ +W FM PVD L L DY+E+I+ PMD +IK +M + GY+ + E
Sbjct: 1 VLKKLIDHECSWIFMQPVDPVELNLPDYFEIIKNPMDLGSIKKRM---ENNGYKLIAEFG 57
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
ADVRL F NA+ YN DV +A+ + F
Sbjct: 58 ADVRLTFDNAISYNGNGSDVCKVARDMKSTF 88
>gi|122921158|pdb|2NXB|A Chain A, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|122921159|pdb|2NXB|B Chain B, Crystal Structure Of Human Bromodomain Containing Protein
3 (Brd3)
gi|340708299|pdb|3S91|A Chain A, Crystal Structure Of The First Bromodomain Of Human Brd3
In Complex With The Inhibitor Jq1
Length = 123
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR+ +L+ + + + +H++AWPF PVD L L DY+++I+ PMD TIK ++
Sbjct: 11 PGRKTNQLQYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRL- 69
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ Y + E D +F N YN DD+ +MA++L + F +K Q+
Sbjct: 70 --ENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQM 119
>gi|189031512|gb|ACD74899.1| BDF2 [Pneumocystis carinii]
Length = 317
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 88 QDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMD 147
+DAF+ + +E + +I RQ+ +++ A PF PVD L + Y +I PMD
Sbjct: 158 EDAFYEKAEQAEMTKEQYKYAISILRQLRRNRDARPFNQPVDPIKLNIPSYPTIITHPMD 217
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
F TI K+ K Y V DV LVF N +N E + +MA++L F ++ LQ
Sbjct: 218 FGTIDKKLSSKQ---YETVDXFKKDVELVFTNCFTFNGEESPISIMARNLKNIFGKQILQ 274
Query: 208 L 208
+
Sbjct: 275 M 275
>gi|195426878|ref|XP_002061517.1| GK20671 [Drosophila willistoni]
gi|194157602|gb|EDW72503.1| GK20671 [Drosophila willistoni]
Length = 623
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 114 QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADV 173
++ + K+A FM PVD E L + YY +IE+PMD TI ++ Y +V E AD
Sbjct: 46 EVCKKKFALDFMEPVDTEVLQVPTYYTIIERPMDLGTITKRV---QNNYYNSVDEAVADF 102
Query: 174 RLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME-EEKRQEEEEAKAQLDMQL 232
RLV +N +N D VH K +LEKF K ++ LPK E K+ + +KA+L+
Sbjct: 103 RLVLRNCFTFNRPGDVVHRKGK-MLEKFFYKKIKSLPKGAEILCKKDPKAVSKAKLNGPK 161
Query: 233 TQEAVQTNKAKELRSELNEV 252
T A N ++ R +L ++
Sbjct: 162 TM-ATLANTERQCREQLKKL 180
>gi|68051321|gb|AAY84924.1| IP09966p [Drosophila melanogaster]
Length = 276
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
+KR F++ ++ I AW F P+D + LGLHDY+E++ +PMD ST++++++ TG
Sbjct: 29 IKRLFSSTYKNI-----AWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLN----TGC 79
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y + + D+RL+F N Y + + MAK L FEE + Q+
Sbjct: 80 YLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQV 125
>gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502]
gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis]
Length = 2267
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 490
Query: 179 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEE--KRQEEEEAKAQLDMQ 231
N YN D++V + K+L +K +W LL + +E+ K++ EE K LD Q
Sbjct: 491 NCFHYNSVDSDIYVQGKLLKALFDKLYGEW-ALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|340374210|ref|XP_003385631.1| PREDICTED: hypothetical protein LOC100637162 [Amphimedon
queenslandica]
Length = 2504
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 7/90 (7%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKN 179
AWPF+ PV+ + + DYY VI+KPMDF T+K K+ +GK Y N + DVRL+F N
Sbjct: 2418 AWPFLEPVNRKKI--PDYYRVIKKPMDFHTVKQKLREGK----YPNKESLALDVRLIFDN 2471
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
YN++ + + ++ + FE++W +++
Sbjct: 2472 CAFYNEDNSQIGLAGHNMRQYFEKRWTEMM 2501
>gi|255732041|ref|XP_002550944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131230|gb|EER30790.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 730
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Query: 59 NNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQITQ- 117
N + +TS+S S+A + K + V K + +H + + EL+ I +++
Sbjct: 334 NRRKSTSESDSVAASRPKRKIVPPKAKDLE--YHTKPKNKKFAAELRFCNQTIKELMSKK 391
Query: 118 -HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ + +PF+ PVD L + +Y E++++PMD TI+ K+ + Y N + DVRLV
Sbjct: 392 HYNYNFPFLAPVDTVALNIPNYREIVKEPMDLGTIQTKLTNNE---YENGDQFEKDVRLV 448
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
FKN +N E DV++M L F++KW
Sbjct: 449 FKNCYAFNPEGTDVNMMGHRLEAVFDKKW 477
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ + I +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y +V +I
Sbjct: 216 VIKVIKRNREAVPFLHPVDTVKLNIPFYYNYIPRPMDLSTIERKINLK---AYEDVSQII 272
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 273 DDFNLMVKNCKKFNGEAAGISKMASNIQAQFEKHMVKVPPK 313
>gi|242769778|ref|XP_002341843.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
gi|218725039|gb|EED24456.1| transcription regulator BDF1, putative [Talaromyces stipitatus ATCC
10500]
Length = 798
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 120 WAW--PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVF 177
WA PF +PVD L + Y+ VI+KPMD STI+ K+ K G Y N +E ADVRL+
Sbjct: 470 WAIANPFYYPVDPVALNIPTYHSVIKKPMDLSTIQVKL--KAGQ-YENAKEFEADVRLML 526
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKW 205
KN K+N D ++ + E F KW
Sbjct: 527 KNCFKFNIPGDPIYQAGQKFEEVFNSKW 554
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
+ PVD L + Y+ VI +PMD STI++K+ Y V E+ ADV L+ NA K+
Sbjct: 282 YREPVDPIKLNIPTYFTVITEPMDLSTIESKLKKNQ---YNTVAEVIADVDLMAGNAAKF 338
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA 224
N V + L F K LQ LP E E+++ ++ A
Sbjct: 339 NGPEHIVSQEGQKLKALF-RKQLQKLPGPDEVEEKKPKKAA 378
>gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein
with the following architecture:
chromo-bromo-chromo-SNF2 ATpase' [Cryptosporidium parvum
Iowa II]
Length = 2270
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 66/118 (55%), Gaps = 9/118 (7%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K+ PF+ PVD G DYY VI +PMDF+T++ K+ + Y +E ++DV+ +F
Sbjct: 434 KYGIPFLRPVDPNMDGASDYYSVISRPMDFTTVQTKLYLRI---YSQPQEFWSDVQQIFT 490
Query: 179 NAMKYNDERDDVHV---MAKSLLEKFEEKWLQLLPKVMEEE--KRQEEEEAKAQLDMQ 231
N YN D++V + K+L +K +W LL + +E+ K++ EE K LD Q
Sbjct: 491 NCFHYNSVDSDIYVQGKLLKALFDKLYGEW-ALLSRQTQEDLVKQKSEESPKEWLDDQ 547
>gi|195585984|ref|XP_002082758.1| GD25062 [Drosophila simulans]
gi|194194767|gb|EDX08343.1| GD25062 [Drosophila simulans]
Length = 271
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 12/125 (9%)
Query: 85 KQQQDAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 144
KQ+ + F E A + + +KR F+ ++ I AW F P+D + LGLHDY+E++++
Sbjct: 4 KQETERFSPEMNACKVI--MKRLFSNTYKNI-----AWVFYEPLDPQLLGLHDYHEIVQE 56
Query: 145 PMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
PMD ST++++++ TG Y N + D+RL+F N Y + + MAK L FE+
Sbjct: 57 PMDLSTVRHRLN----TGCYLNAVDFANDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFED 112
Query: 204 KWLQL 208
+ +
Sbjct: 113 MFAHV 117
>gi|323349464|gb|EGA83688.1| Bdf2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 633
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 45/276 (16%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 302 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 361
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 362 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 417
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 418 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 477
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTRL-----SPEDLCKA---------------- 293
L+ L+ Q+ K+S E K K+LG L R S +DL K+
Sbjct: 478 LQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGM 534
Query: 294 LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 326
+ I+ + P+ + E+++D+D E T+ R+
Sbjct: 535 IRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 570
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 148 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 204
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 205 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 239
>gi|357445295|ref|XP_003592925.1| Bromodomain-containing protein [Medicago truncatula]
gi|140053518|gb|ABE79573.2| Bromodomain [Medicago truncatula]
gi|355481973|gb|AES63176.1| Bromodomain-containing protein [Medicago truncatula]
Length = 679
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I R++ + A PF PV+ E LG+ DY+++I+ PMDF TI + ++ D Y N ++Y
Sbjct: 202 IIRKVMKMDAAEPFNVPVNPEALGIPDYFDIIDTPMDFGTICSNLEKND--KYMNSEDVY 259
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVR +++N KYN++ D + + K + + F + W
Sbjct: 260 NDVRYIWENCYKYNNKGDYIVDLMKRVKKNFMKYW 294
>gi|326426578|gb|EGD72148.1| CBP-A protein [Salpingoeca sp. ATCC 50818]
Length = 2186
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+EL F + +I H+ + PF+ PVD L DYY++I++PMD TI K+ D
Sbjct: 981 EELLHHFWPLHEKIRSHEDSHPFLEPVDTVALNCSDYYDIIKQPMDLGTIGKKLKAGD-- 1038
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLL 198
Y++ E D+RL+F+NA YN E+ V MAK+L
Sbjct: 1039 -YKDPWEYCDDMRLMFRNAFTYNGEKSIVGKMAKTLF 1074
>gi|365991080|ref|XP_003672369.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
gi|343771144|emb|CCD27126.1| hypothetical protein NDAI_0J02340 [Naumovozyma dairenensis CBS 421]
Length = 733
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 96/193 (49%), Gaps = 18/193 (9%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMD 147
+ ++ +++Q+ + +I +++T K A +PF+ PVD L L YY+ +++PMD
Sbjct: 344 YENKKPKSKKLQQAMKFCQSILKELTNKKHASFNYPFLEPVDPVALNLPTYYDYVKEPMD 403
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
TI K++ + Y + + DVRLVFKN +N + V++M L E F KW
Sbjct: 404 LGTISKKLNNWE---YETMDQFGDDVRLVFKNCYAFNPDGTIVNMMGHRLEEVFNNKWAD 460
Query: 208 LLPKVMEEEKRQEE----------EEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQL 256
P + E +E +EA++ ++ E TN A + L +L + ++L
Sbjct: 461 -RPTIDNYEDTDDESKYDNGDMSSDEAESDMEESEIDETSITNPAIQYLEEQLARMKVEL 519
Query: 257 ENLRETVIQKCRK 269
+ L+ +++ RK
Sbjct: 520 QVLKNQELERIRK 532
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + + K A PF+ PVD+ L + YY + +PMD STI+ K+ + Y +I
Sbjct: 192 IKAVKRLKDARPFLKPVDIVALNIPFYYNYVPRPMDLSTIEKKL---NVNAYSEPEQITD 248
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ N++K+N + MA+++ FE+ L + K
Sbjct: 249 DFNLMVNNSIKFNGPTAVISQMARNIQAAFEKHMLNMAAK 288
>gi|428180935|gb|EKX49800.1| hypothetical protein GUITHDRAFT_67457 [Guillardia theta CCMP2712]
Length = 117
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
E ++ I + + HK W F PVD L + DY E+I+KPMD T++ +D +GT
Sbjct: 7 EWVKKCIGILKVLKNHKHGWVFSEPVDPVKLNIPDYLEIIKKPMDLGTVRTHLD--NGT- 63
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 199
N E +V L F NAM+YN DVH+MAK+L E
Sbjct: 64 ITNPEEFKTNVVLTFDNAMRYNPSNHDVHIMAKTLKE 100
>gi|325193402|emb|CCA27731.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 2004
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+ ELK + + ++ + + W F PVD + DY+++I+ PMD IK +++ +
Sbjct: 722 LTELKNRLMPLLTKLMESEHGWAFNSPVDPVQWNIPDYFDIIKCPMDLGAIKKRLENEH- 780
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEE 203
Y +V ADVRLVF+N + YN + ++ AK LL +FE+
Sbjct: 781 --YNSVDAFAADVRLVFENCIAYNSSTNKFNIAAKQLLTQFEK 821
>gi|395146565|gb|AFN53717.1| putative bromodomain-containing protein [Linum usitatissimum]
Length = 216
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q +A+ + + H + W F PVD L + DY+ +I PMD TI +K+ K Y
Sbjct: 7 QQCSALLKVLLGHPYGWIFSKPVDPVELNIPDYFTIITNPMDLGTINSKLSKKK---YFG 63
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSLLE 199
+ ADVRL F NAM YN + VH A L++
Sbjct: 64 AEDFAADVRLTFANAMLYNPPSNSVHTTALELVK 97
>gi|402592712|gb|EJW86639.1| bromodomain containing protein [Wuchereria bancrofti]
Length = 533
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R++ R F + + + AWPF+ PVD + + DYY++I++PMD TI NK+ +
Sbjct: 418 RIRNTLRAFELLISDAMRQQIAWPFLKPVDAKAVP--DYYQIIKRPMDLRTIMNKLKQR- 474
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y ++ AD RL+F+N YN+E +++ A L + EE++ ++L
Sbjct: 475 --LYDTPDQVIADARLIFENCRIYNEEESEIYKCANKLEQFMEERFSKIL 522
>gi|224056313|ref|XP_002187748.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Taeniopygia guttata]
Length = 2125
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI++K+ Y N+
Sbjct: 2029 ILSELETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIRDKLSSGQ---YPNLEAFS 2083
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DVRLVF N +N++ D+ ++ + FE+KW ++
Sbjct: 2084 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTEIF 2122
>gi|189239068|ref|XP_971434.2| PREDICTED: similar to zinc finger protein [Tribolium castaneum]
Length = 1308
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
A+ ++ + AWPF+ PV + + + DYY+VI KPMDF TIK K++ + Y+ +
Sbjct: 1191 AVLSEVMKDANAWPFLRPV--QKIEVPDYYDVITKPMDFGTIKYKLNMGE---YKEDAQF 1245
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEE 215
AD LVF+N YN DDV+ LL F++K +L K+ EE
Sbjct: 1246 MADALLVFQNCNTYNHTEDDVYKCGVQLLRLFQKKCRELGLKLPEE 1291
>gi|259145174|emb|CAY78438.1| Bdf2p [Saccharomyces cerevisiae EC1118]
Length = 638
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 45/276 (16%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTRL-----SPEDLCKA---------------- 293
L+ L+ Q+ K+S E K K+LG L R S +DL K+
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGM 539
Query: 294 LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 326
+ I+ + P+ + E+++D+D E T+ R+
Sbjct: 540 IRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|190405078|gb|EDV08345.1| hypothetical protein SCRG_00567 [Saccharomyces cerevisiae RM11-1a]
Length = 643
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 45/276 (16%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 312 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 371
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 372 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 427
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 428 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 487
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTRL-----SPEDLCKA---------------- 293
L+ L+ Q+ K+S E K K+LG L R S +DL K+
Sbjct: 488 LQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGM 544
Query: 294 LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 326
+ I+ + P+ + E+++D+D E T+ R+
Sbjct: 545 IRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 580
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 158 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 214
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 215 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 249
>gi|6320132|ref|NP_010213.1| Bdf2p [Saccharomyces cerevisiae S288c]
gi|74583636|sp|Q07442.1|BDF2_YEAST RecName: Full=Bromodomain-containing factor 2
gi|1431082|emb|CAA98636.1| BDF2 [Saccharomyces cerevisiae]
gi|285810964|tpg|DAA11788.1| TPA: Bdf2p [Saccharomyces cerevisiae S288c]
gi|392300048|gb|EIW11139.1| Bdf2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 638
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 45/276 (16%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTRL-----SPEDLCKA---------------- 293
L+ L+ Q+ K+S E K K+LG L R S +DL K+
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGM 539
Query: 294 LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 326
+ I+ + P+ + E+++D+D E T+ R+
Sbjct: 540 IRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|207346961|gb|EDZ73294.1| YDL070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 614
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 45/276 (16%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTRL-----SPEDLCKA---------------- 293
L+ L+ Q+ K+S E K K+LG L R S +DL K+
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLRRKAMKHSVDDLKKSITDKINELSDLEMNGM 539
Query: 294 LEIVAENNPS---FHATAQEVDLDMDAQSELTLWRL 326
+ I+ + P+ + E+++D+D E T+ R+
Sbjct: 540 IRIIKNSLPADEILTSNEDEIEIDLDILDEATIARI 575
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|440800738|gb|ELR21773.1| bromodomain domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 904
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
AWPF PVD LG+ Y+++I++PMDF TI K+ K+G Y + + DV LVF NA
Sbjct: 460 AWPFNQPVDPVALGIPTYFDIIKEPMDFGTINQKL--KNGK-YEVLAQFERDVHLVFANA 516
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
+ +N+ D+ AK L FE + +++ + EE++R
Sbjct: 517 LLFNEPDSDIGYWAKKLRGLFERRLVRVHNMLKEEKER 554
>gi|134117033|ref|XP_772743.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255361|gb|EAL18096.1| hypothetical protein CNBK1170 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 765
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
PF++PVD + DY VI++P+DF+ IKNK+ + T Y +V ++ D+RL+ NA K
Sbjct: 424 PFLYPVDKIIEEVPDYATVIKRPIDFNIIKNKL--AENT-YEDVNQVDDDIRLMVANAQK 480
Query: 183 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 242
+N +VH A LL+ +EEKW + +P +E E+ A+A D ++ Q
Sbjct: 481 FNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSEDPMAEAFDDYSSDEDNAQL--- 536
Query: 243 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
+ L S++ ++ Q+ LR + ++ ++ K TA
Sbjct: 537 RSLESQVIALNQQISALRSKMTKRRAARGSKSKSKPKTA 575
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 115 ITQHKW--------------AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+TQHK+ A+ F+ PVD + Y+ VI+ PMD T++ K+ D
Sbjct: 209 LTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVETKLIVSDP 268
Query: 161 TG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
G Y NV E+ DVR +++N+ K+N + V MA L E FE
Sbjct: 269 RGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATRLEEAFE 327
>gi|344245482|gb|EGW01586.1| Bromodomain adjacent to zinc finger domain protein 2B [Cricetulus
griseus]
Length = 1853
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+ I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 1755 SVILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YTNFET 1809
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 1810 FALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1846
>gi|145479637|ref|XP_001425841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392913|emb|CAK58443.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 115 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 174
I + K A F PVD + G+ DYYE++ KPMDF TIKNK+ + Y + +E Y DV
Sbjct: 401 IWKAKGAHLFHQPVDQKKYGISDYYEIVSKPMDFGTIKNKL---NSNVYSSCQEFYDDVL 457
Query: 175 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVM 213
VF+N + YN E +V + S+ ++F+ + L LL K +
Sbjct: 458 QVFENCILYNGETSEVGQIGLSIKQEFQNQLELTLLKKYL 497
>gi|358338689|dbj|GAA31548.2| E1A/CREB-binding protein [Clonorchis sinensis]
Length = 2085
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
+EL R F + ++ K+A PF PVD L + DY+EVI++PMD +TI+N ++ DG
Sbjct: 686 EELLRSFLQLLEEVYNDKFAEPFRAPVDPVMLHIPDYFEVIKEPMDLTTIRNNLE--DGN 743
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y++ E+ RL+F NA YN + V+ M L E F+ + Q++
Sbjct: 744 -YKDPWEVVEHFRLMFNNAWLYNKKNSKVYKMCTKLAELFQSRIDQVM 790
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+ I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 2048 SMILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLET 2102
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2103 FALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2139
>gi|58260602|ref|XP_567711.1| nucleus protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57229792|gb|AAW46194.1| nucleus protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 1275
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
PF++PVD + DY VI++P+DF+ IKNK+ Y +V ++ D+RL+ NA K
Sbjct: 934 PFLYPVDKIIEEVPDYATVIKRPIDFNIIKNKLAENT---YEDVNQVDDDIRLMVANAQK 990
Query: 183 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 242
+N +VH A LL+ +EEKW + +P +E E+ A+A D ++ Q
Sbjct: 991 FNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSEDPMAEAFDDYSSDEDNAQL--- 1046
Query: 243 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
+ L S++ ++ Q+ LR + ++ ++ K TA
Sbjct: 1047 RSLESQVIALNQQISALRSKMTKRRAARGSKSKSKPKTA 1085
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 115 ITQHKW--------------AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+TQHK+ A+ F+ PVD + Y+ VI+ PMD T++ K+ D
Sbjct: 719 LTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVETKLIVSDP 778
Query: 161 TG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
G Y NV E+ DVR +++N+ K+N + V MA L E FE
Sbjct: 779 RGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATRLEEAFE 837
>gi|354476573|ref|XP_003500499.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B-like
[Cricetulus griseus]
Length = 2117
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+ I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 2019 SVILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YTNFET 2073
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2074 FALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2110
>gi|328863827|gb|EGG12926.1| hypothetical protein MELLADRAFT_46486 [Melampsora larici-populina
98AG31]
Length = 339
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K+ WPF PVD LG+ +Y +I+KPMD STIK K+D + Y+ AD RL+
Sbjct: 106 KFVWPFYEPVDPVKLGVPEYLTIIKKPMDLSTIKQKLDRGE---YKAGAAFAADFRLMLN 162
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKW 205
N +N V+ K L FE+KW
Sbjct: 163 NCFTFNPVGTPVYNFGKQLECLFEQKW 189
>gi|326680215|ref|XP_002666866.2| PREDICTED: cat eye syndrome critical region protein 2 [Danio rerio]
Length = 936
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 8/115 (6%)
Query: 99 RRMQELKRQFAAIFR---QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
++ E+ + A+++ + HK AWPFM PVD E +Y+E+I+ PMD STI+ K+
Sbjct: 395 KQFYEIDDDYTALYKVLEALKAHKDAWPFMEPVD-ESYAP-NYHEIIQTPMDLSTIERKL 452
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ DG Y E ADV+L+F N ++YN E + +MA+SL F L+ P
Sbjct: 453 N--DGE-YLAKDEFVADVKLMFGNCLEYNGEESEYTIMAESLERCFTRALLKHFP 504
>gi|151941931|gb|EDN60287.1| bromodomain factor [Saccharomyces cerevisiae YJM789]
Length = 638
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K+L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKNLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTR 284
L+ L+ Q+ K+S E K K+LG L R
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|444514374|gb|ELV10566.1| Bromodomain adjacent to zinc finger domain protein 2B [Tupaia
chinensis]
Length = 1028
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 932 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFA 986
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 987 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 1021
>gi|196014713|ref|XP_002117215.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
gi|190580180|gb|EDV20265.1| hypothetical protein TRIADDRAFT_61269 [Trichoplax adhaerens]
Length = 1478
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
G R+ ++ + + + +H+ +WPF+ PVD + DYYE+++ PMDF TIK K+
Sbjct: 1351 GSRLSTELKKCHELIKDLEEHRDSWPFLQPVDKNKVP--DYYEIVKNPMDFQTIKKKL-- 1406
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDER 187
Y++ RE DVRLVF N +YN+ R
Sbjct: 1407 -SSIRYKDPREFATDVRLVFINCAEYNNPR 1435
>gi|195489088|ref|XP_002092589.1| GE11582 [Drosophila yakuba]
gi|194178690|gb|EDW92301.1| GE11582 [Drosophila yakuba]
Length = 257
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 8/105 (7%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
+KR F+ ++ I AW F P+D + LGLHDY+E++ +PMD ST+++++ + Y
Sbjct: 20 IKRLFSNTYKNI-----AWVFYEPLDAQLLGLHDYHEIVREPMDLSTVRHRL---NTACY 71
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+ D+RL+F N Y + + MAK L FEE + Q+
Sbjct: 72 LTAADFAKDMRLIFYNTYLYTNPGHLCYHMAKQLQIIFEEMYAQV 116
>gi|407917747|gb|EKG11050.1| hypothetical protein MPH_11793 [Macrophomina phaseolina MS6]
Length = 897
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 120 WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKN 179
+++PF+ PVD L + Y ++I+KPMD T+++++ K G Y + ++ AD+ L+F N
Sbjct: 559 FSYPFLQPVDPVALNIPQYLKIIKKPMDLGTVQSRL--KHGE-YTSAKDAKADLDLIFAN 615
Query: 180 AMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--------------- 224
K+N E DDV+ M L + + W + + MEE E +
Sbjct: 616 CYKFNPEGDDVNKMGHMLEDVYRRAWEKKA-EWMEEHAPASEPASASEDEDDEESEDEDD 674
Query: 225 -------KAQLD---MQLTQE--AVQTNKAKELR------SELNEVDMQLENLRETVI-- 264
+AQ+ M LTQE A+Q K K + S+ + + + L +
Sbjct: 675 EEEIRRRQAQIAEQIMMLTQEQLALQAKKGKSPKVVGKKTSKKEKTQTKSKKLSKPAAPV 734
Query: 265 ---QKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHAT-AQEVDLDMDAQSE 320
+K R+++ EEK+ + ++ L + KA++I+ PS E++LD+D
Sbjct: 735 KPKKKLRQITFEEKRLISETISNLDEHQMAKAVQIIRNGVPSLQGVNDDELELDIDTIPN 794
Query: 321 LTLWRLKVFVQESLKAASRSSGDMGGNNNNNNDDNNNEKDNSNKKNKNNPKRKKEICDAL 380
L L +++ ++ ++ ++ + +++ + + K+ + + KN P K E A+
Sbjct: 795 EVLHDLLKYIK-TINPSTTAAPALPAFDDDY--EPPSRKNTATQPRKNKPMGKHEQEQAI 851
Query: 381 A 381
A
Sbjct: 852 A 852
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
R + K A F+HPVD L + Y +VI PMD ST++ K K Y++V +
Sbjct: 351 LRGAKKTKPAAAFLHPVDPVALNIPHYPQVITNPMDLSTLEAKHKEKQ---YQSVDAFMS 407
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSL--LEKFEEKWLQLLP 210
D L+ N + +N + H +A+S L+ + E+ + LLP
Sbjct: 408 DFYLMIDNCVLFNGIQ---HPIAQSAWNLQMWFERGMHLLP 445
>gi|241955217|ref|XP_002420329.1| bromodomain-containing transcription factor, putative; protein
involved in transcription initiation at TATA-containing
promoters, putative [Candida dubliniensis CD36]
gi|223643671|emb|CAX41404.1| bromodomain-containing transcription factor, putative [Candida
dubliniensis CD36]
Length = 721
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ + +PF+ PVD L + +Y E+++ PMD TI++K+ + Y N + DVRLV
Sbjct: 391 HYNYNFPFLAPVDTVALNIPNYNEIVKHPMDLGTIQSKLANNE---YENADDFEKDVRLV 447
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
FKN +N E DV++M L F++KW
Sbjct: 448 FKNCYLFNPEGTDVNMMGHRLEAVFDKKW 476
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + +++ A PF+HPVD L + YY I +PMD STI+ K++ K Y NV ++
Sbjct: 207 IKAVKRNREAVPFLHPVDTVKLNVPFYYNYIPRPMDLSTIERKINLK---AYENVSQVVD 263
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D L+ KN K+N E + MA ++ +FE+ +++ PK
Sbjct: 264 DFNLMVKNCKKFNGEAAGISKMAMNIQAQFEKLMVKVPPK 303
>gi|349577009|dbj|GAA22178.1| K7_Bdf2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTR 284
L+ L+ Q+ K+S E K K+LG L R
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|256274113|gb|EEU09024.1| Bdf2p [Saccharomyces cerevisiae JAY291]
Length = 638
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKP 145
D + + + +Q+ R I + + K + +PF+ PVD L L +Y++V++ P
Sbjct: 307 DIYENSKPKSKTLQKKFRTCLKILKVLMSKKNSDINFPFLQPVDPIALNLPNYFDVVKNP 366
Query: 146 MDFSTIKNK-MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
MD TI N M+ K Y+ + + D+ LVF N ++N E ++VH M K L E F
Sbjct: 367 MDLGTISNNLMNWK----YKTIDQFVDDLNLVFYNCFQFNPEGNEVHSMGKKLKELFNFH 422
Query: 205 WLQ---LLPKV-----MEEEKRQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
WL+ +L ++ +EE+ + + D + E TN A + L +L +++++
Sbjct: 423 WLENQDILNEIETDSDLEEDNYSSSYSSDDEYDDEDINENDITNPAIQYLEQKLKKMEVE 482
Query: 256 LENLRETVIQKCRKMSTEEK-KNLGTALTR 284
L+ L+ Q+ K+S E K K+LG L R
Sbjct: 483 LQQLKR---QELSKLSKERKRKHLGKTLLR 509
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A PF+ PVD L + Y+ ++ PMD S I+ K+ G Y +V ++ +D + +
Sbjct: 153 KDARPFLKPVDPIALNIPHYFNYVQTPMDLSLIETKL---QGNVYHSVEQVTSDFKTMVD 209
Query: 179 NAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
N + +N + MAK + + FE+K + P+V+
Sbjct: 210 NCLNFNGPESSISSMAKRIQKYFEKKLSAMPPRVL 244
>gi|242058181|ref|XP_002458236.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
gi|241930211|gb|EES03356.1| hypothetical protein SORBIDRAFT_03g029565 [Sorghum bicolor]
Length = 225
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA-----DVRL 175
W F PVD LGL DYY V+ PMD T+ +++ + R +Y DVRL
Sbjct: 76 GWVFDAPVDARALGLRDYYTVVADPMDLGTVLRRLERR--------RYVYPTAFADDVRL 127
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
F+NAM YNDE D V+ A L FE +W +
Sbjct: 128 TFRNAMSYNDEGDPVYESAAELSGIFEARWASI 160
>gi|1749522|dbj|BAA13819.1| unnamed protein product [Schizosaccharomyces pombe]
Length = 361
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 117 QHK-WAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
QH+ +A+PF PV+ G DY++VI+ PMD T++NK++ + Y +++ AD+ L
Sbjct: 56 QHEAYAYPFYKPVNPTACGCPDYFKVIKHPMDLGTMQNKLNHNE---YASMKAFEADMVL 112
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+FKN K+N VH+M K L F++ W
Sbjct: 113 MFKNCYKFNSAGTPVHLMGKKLESIFQKLW 142
>gi|440632694|gb|ELR02613.1| hypothetical protein GMDG_05576 [Geomyces destructans 20631-21]
Length = 895
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
PF+ PVD LG+ +Y+++++ PMD STI + ++ Y N ++ AD+RL+FKN K
Sbjct: 549 PFLIPVDPVALGIPEYFKIVKSPMDLSTITDNLNSGH---YANSKDFEADIRLMFKNCYK 605
Query: 183 YNDERDDVHVMAKSLLEKFEEKW 205
+N V+VM + L F +W
Sbjct: 606 FNPPSTAVNVMGQELEAFFNSEW 628
>gi|392571704|gb|EIW64876.1| Bromodomain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 749
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
Q + A PF PVD +G+ +Y +V++KPMD +T+K K+D + + RE
Sbjct: 414 LHQKQHYTIAHPFYEPVDPVKMGIPEYPKVVKKPMDLATMKKKLDAGEYSTAEKFRE--- 470
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D RL+ KN M +N + VH K+L FEEKW L
Sbjct: 471 DFRLMVKNCMTFNPPGNPVHEAGKALQVLFEEKWKNL 507
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG------- 162
+ R + + K + PF++PVD LG+ Y +I+ PMDFS+I+ K+ +
Sbjct: 209 STVRTLKRMKDSGPFLNPVDPVALGIPHYPTIIKHPMDFSSIERKLTTSNPAKPDPNPAN 268
Query: 163 --YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
Y +V +I AD+RL+F N + +N V M K + F+++ Q+
Sbjct: 269 PRYGSVDDIVADIRLIFANCLTFNGPDHPVTQMGKRVEAVFDKQVKQM 316
>gi|195347028|ref|XP_002040056.1| GM15561 [Drosophila sechellia]
gi|194135405|gb|EDW56921.1| GM15561 [Drosophila sechellia]
Length = 267
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
+KR F+ ++ I AW F P+D + LGLHDY+E++++PMD ST++++++ TG
Sbjct: 21 MKRLFSNTYKNI-----AWVFYEPLDPQLLGLHDYHEIVQEPMDLSTVRHRLN----TGC 71
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
Y N + D+RL+F N Y + + MAK L FE+ + + + + + EE
Sbjct: 72 YLNAVDFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEDMFSHVHLYICSGSRMRAEE 131
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 2095 ILTEMETHEDAWPFLLPVNLKLV--PGYRKVIKKPMDFSTIREKLNNGQ---YPNFETFA 2149
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2150 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2184
>gi|393244892|gb|EJD52403.1| hypothetical protein AURDEDRAFT_55704 [Auricularia delicata
TFB-10046 SS5]
Length = 391
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDG 157
GR +E+ Q + + HK AWPF+HPV+ E + DYY+VI+ PMDFS +++K++
Sbjct: 284 GRNGEEM--QMKKLLTTLQNHKMAWPFLHPVNREEVV--DYYDVIKNPMDFSLMEHKLEH 339
Query: 158 KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
Y + + AD +L+F N + YN E + ++V ++ KF E LQ
Sbjct: 340 HR---YSTIDDFVADCQLIFSNCLTYNPE-NTIYVKCALVMRKFVETQLQ 385
>gi|424513402|emb|CCO66024.1| predicted protein [Bathycoccus prasinos]
Length = 964
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 9/113 (7%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
++ AI +++ + A+PF+ VD L + DY ++I PMDF TI +++ +D G
Sbjct: 536 RYKAILQRLMSDRNAFPFLEKVDPIALDIPDYLDIISHPMDFGTIFKRLEPEDEHGVPLE 595
Query: 167 REIYA---------DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
Y DVRLVF NA YN + V+V A+ L + FE +W+ P
Sbjct: 596 TTYYTDSDPSKFANDVRLVFANAFTYNKPSELVYVQAEKLAQLFEREWVYKFP 648
>gi|308810150|ref|XP_003082384.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
gi|116060852|emb|CAL57330.1| Zcwcc3-prov protein (ISS) [Ostreococcus tauri]
Length = 1083
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
+I R I +K A+ F+ PVD + DY++VI+ PMD TI K++ ++ Y N
Sbjct: 584 SIHRIIMTNKNAYMFLKPVDPVYWEIPDYFDVIKNPMDLGTIMTKLEKRE---YENQPSA 640
Query: 170 YA-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
YA DVRLV+ NAM YN E + V+ MA+ + +FE +W
Sbjct: 641 YAADVRLVWSNAMTYNKEEEPVYKMARIMSREFEYQW 677
>gi|301113438|ref|XP_002998489.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111790|gb|EEY69842.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 910
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+ ELK + + +++ ++ W F +PVD + DY+++I+ PMD TIK +++ +
Sbjct: 104 ITELKNRLMPLLQKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEH- 162
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
Y +V DVRLVF+N + YN + ++ AK LL F
Sbjct: 163 --YNSVEAFAGDVRLVFENCIAYNSSTNKFNIAAKQLLASF 201
>gi|428178605|gb|EKX47480.1| hypothetical protein GUITHDRAFT_50108, partial [Guillardia theta
CCMP2712]
Length = 90
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV-REI 169
+ +++ K AWPF PVD + L L DY++++++PMD STI++++ G++ Y+ V E
Sbjct: 2 VLDKVSNDKHAWPFEEPVDAKKLKLKDYHKIVKEPMDLSTIRSRLQGEE---YKRVEEEF 58
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
+ D+ LVF NA+ +N E D +H A+ L KF
Sbjct: 59 HRDMHLVFDNALLFNHEGDPIHEYAEQLKMKF 90
>gi|384501114|gb|EIE91605.1| hypothetical protein RO3G_16316 [Rhizopus delemar RA 99-880]
Length = 227
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 116 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
Q ++PF++PVD L + DY +++ P+D STI+ K+ + Y + AD++L
Sbjct: 13 AQKHLSFPFLYPVDPVALNIPDYPSIVKHPIDLSTIETKL---NQNAYDSPHAFAADIKL 69
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 235
+F N YN ++ +AK L F+ +W E KA+ + ++
Sbjct: 70 MFNNCYLYNAPELPIYDVAKELEAIFDRQW-----------------EIKAKQPASVPRQ 112
Query: 236 AVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALE 295
+ + R + + E+L S EEKK L + RL+ + L + ++
Sbjct: 113 IKPSKRPAVERKMKSRKKKKRESL-----------SYEEKKELSERINRLTGDRLNEVIQ 161
Query: 296 IVAENNPSFHATAQEVDLDMDAQSELTLWRLKVFVQESLKAASRSSGDMGGNNN 349
I+ + P E+ LD+DA TL RL FV G N N
Sbjct: 162 IIQSSLPDLDKGETEIVLDIDALDINTLKRLNDFVHNKANTVHSDEGKTLANCN 215
>gi|320166940|gb|EFW43839.1| Brd8 protein [Capsaspora owczarzaki ATCC 30864]
Length = 512
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 15/121 (12%)
Query: 105 KRQFAAIFRQITQHKWAWPFMHPV---DVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
K+ ++R I+ H++A F+ PV +V G Y VI++PMD +TI+ ++D DGT
Sbjct: 364 KKSIMIVWRNISNHRYANVFLRPVTDDEVPG-----YSSVIKRPMDLTTIRKRID--DGT 416
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEE 221
R+ R+ D+ L+F NA+ YND DV++MA + E+ L ME E Q++
Sbjct: 417 -IRSTRDFLRDIYLMFANALMYNDADHDVYLMAVEMRNDAREQILDF----METEASQQD 471
Query: 222 E 222
+
Sbjct: 472 D 472
>gi|145534263|ref|XP_001452876.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420575|emb|CAK85479.1| unnamed protein product [Paramecium tetraurelia]
Length = 468
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 106 RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRN 165
+Q I QI + K A+ F PVD + + DY+E+++KPMDF TIKNK+ + Y+N
Sbjct: 363 KQAKKIIAQIWKAKGAYFFHKPVDQKEFHITDYFEIVKKPMDFGTIKNKL---NVNAYKN 419
Query: 166 VREIYADVRLVFKNAMKYNDERDDVHVMAKSL 197
RE +AD+ LVF N + YN + + + S+
Sbjct: 420 FREFHADMLLVFDNCVLYNGNQSAIGQIGVSI 451
>gi|348670161|gb|EGZ09983.1| hypothetical protein PHYSODRAFT_460736 [Phytophthora sojae]
Length = 924
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+ ELK + + ++ ++ W F +PVD + DY+++I+ PMD TIK +++ +
Sbjct: 110 VAELKTRLMPLLTKLMDSEYGWTFNNPVDPVQWNIPDYFDIIKCPMDLGTIKKRLEAEH- 168
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
Y +V DVRLVF+N + YN + ++ AK LL F
Sbjct: 169 --YNSVEAFAGDVRLVFENCIAYNSSTNKFNIAAKQLLASF 207
>gi|345489407|ref|XP_001604290.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
isoform 1 [Nasonia vitripennis]
Length = 1443
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
K + +I ++K +WPFM PV + + DY++ I PMDF TIK K + + Y
Sbjct: 1300 CKHLLTQLLAEIKKNKDSWPFMAPVTKDEVP--DYHDYISHPMDFGTIKTKFENDE---Y 1354
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
R ++E Y+D LVF N YN E +V+ L++ FE+K
Sbjct: 1355 RTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGMRLMKFFEKK 1395
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 2084 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YSNLETFA 2138
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ ++ + FE+KW
Sbjct: 2139 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 2173
>gi|401624564|gb|EJS42620.1| bdf1p [Saccharomyces arboricola H-6]
Length = 695
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMD 147
+ ++ +R+Q+ + +I +++ K A +PF+ PVD + L Y+E +++PMD
Sbjct: 313 YESKKPKSKRLQQAMKFCQSIVKELVAKKHASYNYPFLEPVDPVSMNLPTYFEYVKEPMD 372
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
TI K++ + Y+ + + DVRLVFKN +N + V++M L E F KW
Sbjct: 373 LGTIAKKLNDWE---YQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWAD 429
Query: 208 LLPKVMEEEK------RQEEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQLENLR 260
P + E + + + ++ +++ E + TN A + L +L + ++L+ L+
Sbjct: 430 -RPNLDEYDSDEDLRNQGDYDDYESEFSESDIDETIITNPAIQYLEEQLARMKVELQQLK 488
Query: 261 ETVIQKCRK 269
E + K RK
Sbjct: 489 EQELDKIRK 497
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
+ + + K A PF+ PVD L + Y+ I++PMD STI+ K+ + Y +I D
Sbjct: 171 KAVKRLKDARPFLQPVDPVKLDIPFYFNYIKRPMDLSTIERKL---NVGAYEVPEQIMED 227
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQL 232
++ N++++N + MA+++ FE+ L +P + + AQ D +
Sbjct: 228 FNVMVNNSIRFNGPNAGISQMARNIQASFEKHMLN-MPAKDAPPAPTKGRRSSAQEDTPV 286
Query: 233 TQEAVQTNKAKELRS 247
QT+ + R+
Sbjct: 287 VIRRAQTHNGRPKRT 301
>gi|345489409|ref|XP_003426132.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 1A-like
isoform 2 [Nasonia vitripennis]
Length = 1407
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
K + +I ++K +WPFM PV + + DY++ I PMDF TIK K + + Y
Sbjct: 1264 CKHLLTQLLAEIKKNKDSWPFMAPVTKDEVP--DYHDYISHPMDFGTIKTKFENDE---Y 1318
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
R ++E Y+D LVF N YN E +V+ L++ FE+K
Sbjct: 1319 RTLQEFYSDCLLVFDNCQTYNTEHSEVYKAGMRLMKFFEKK 1359
>gi|390604188|gb|EIN13579.1| Bromodomain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 557
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 101 MQELKRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
M ++ +F ++ R + + K + PF+ PVD L + Y +I+ PMD ST++ K+ +
Sbjct: 1 MNPIQHRFCLSVVRSLKKMKDSVPFVRPVDPVALNIPHYPSIIKNPMDLSTVERKLGSSN 60
Query: 160 GTG---------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
YRNV E ADVRL+F NA+ +N V +M K + + F+++ Q+ P
Sbjct: 61 PAKPDPNPSNPRYRNVDEFIADVRLIFSNALLFNGPDHAVTLMGKRVQDVFDKQLRQMPP 120
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ A PF PVD L + DY ++++KPMD ST++ K+D + Y N ++ Y D +L+
Sbjct: 219 HYAIASPFYDPVDWVALNIPDYPKIVKKPMDMSTMRKKLDNHE---YPNAQKFYDDFKLM 275
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+N +N V+ L F++KW L
Sbjct: 276 IRNCFSFNPAGTPVNQAGIDLQRLFDDKWKSL 307
>gi|14164429|dbj|BAB55682.1| P0047B08.5 [Oryza sativa Japonica Group]
Length = 370
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ W F PVD L L DYY I PMD T++ +++ + Y +
Sbjct: 184 LLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRR---YADPWAFA 240
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN D V+ A L E FE W P V+ R + E K +L
Sbjct: 241 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSVLAAPPRPPDAERKRRLSG 296
Query: 231 QLTQEAV 237
L + V
Sbjct: 297 LLPRLPV 303
>gi|170579184|ref|XP_001894716.1| Bromodomain containing protein [Brugia malayi]
gi|158598584|gb|EDP36451.1| Bromodomain containing protein [Brugia malayi]
Length = 1389
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R++ R F + + + AWPF+ PVD + + DYY++I++PMD TI NK+ +
Sbjct: 1274 RIRNTLRAFELLISDAMRQQIAWPFLKPVDAKAVP--DYYQIIKRPMDLRTIMNKLKQR- 1330
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y ++ AD RL+F+N YN+E +++ A L + EE++ ++L
Sbjct: 1331 --LYDTPDQVIADARLIFENCRIYNEEESEIYKCANKLEQFMEERFSKIL 1378
>gi|325090838|gb|EGC44148.1| histone acetyltransferase [Ajellomyces capsulatus H88]
Length = 326
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
D RE GR EL+R QI HK AWPF++PV+ + + DYY VI PMD
Sbjct: 207 DKLAREPRHGRHFNELRR----FLNQIQNHKQAWPFLNPVNRDEVP--DYYNVIVSPMDL 260
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
ST++ +++ Y + +++ AD++L+F N +YND V+ LEK+ ++
Sbjct: 261 STMEERLECD---SYPSPKDLVADLKLIFSNCRRYNDA-STVYAKCAVKLEKYMWSLIKK 316
Query: 209 LP 210
+P
Sbjct: 317 IP 318
>gi|307104678|gb|EFN52930.1| hypothetical protein CHLNCDRAFT_53989 [Chlorella variabilis]
Length = 1253
Score = 72.4 bits (176), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-----DGKDGTGYRNVREIYADVRL 175
A PF PVD EGLG+ +Y +VI +PMD TI++++ DG +GYR E+ ADV L
Sbjct: 513 AEPFSEPVDAEGLGIPEYRQVIRRPMDLGTIRDRLTSGLRDGWAASGYRGADEVAADVAL 572
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ N KYN + MA + F + W
Sbjct: 573 TWANCRKYNAAGSRICGMAARMEAAFRKLW 602
>gi|145510564|ref|XP_001441215.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408454|emb|CAK73818.1| unnamed protein product [Paramecium tetraurelia]
Length = 489
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 3/83 (3%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFK 178
K A F +PVD + G++DYY+++++PMDF T+K K++ Y+N +E Y D+ LVF
Sbjct: 396 KGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKLNANQ---YKNCKEFYHDIMLVFD 452
Query: 179 NAMKYNDERDDVHVMAKSLLEKF 201
N + YN +D+ + SL ++F
Sbjct: 453 NCILYNGSENDIGQIGLSLKQEF 475
>gi|159155373|gb|AAI54472.1| LOC799918 protein [Danio rerio]
Length = 706
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 8/115 (6%)
Query: 99 RRMQELKRQFAAIFR---QITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM 155
++ E+ + A+++ + HK AWPFM PVD +Y+E+I+ PMD STI+ K+
Sbjct: 396 KQFYEIDDDYTALYKVLEALKAHKDAWPFMEPVDESYAP--NYHEIIQTPMDLSTIERKL 453
Query: 156 DGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
+ DG Y E ADV+L+F N ++YN E + +MA+SL F L+ P
Sbjct: 454 N--DGE-YLAKDEFVADVKLMFGNCLEYNGEESEYTIMAESLERCFTRALLKHFP 505
>gi|50303459|ref|XP_451671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640803|emb|CAH02064.1| KLLA0B03113p [Kluyveromyces lactis]
Length = 661
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 86/174 (49%), Gaps = 24/174 (13%)
Query: 111 IFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
+ +++ K++ +PF+ PVD L Y++ +++PMD T++ K++ + Y+
Sbjct: 288 VLKELLSKKYSSFNYPFLEPVDPVALNCPTYFDFVKEPMDLGTVQKKLNNWE---YQTSE 344
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE------- 220
E DVRLVFKN +N E V++M L + F KW P + EEE E
Sbjct: 345 EFEHDVRLVFKNCYAFNPEGTIVNMMGHRLEDVFNSKWAD-RPVIPEEESADEGGESEDG 403
Query: 221 ----EEEAKAQLD-MQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 269
E + Q+D Q+T A+Q L +L + ++L+ L++ + + RK
Sbjct: 404 YESDEPSEEEQIDETQITNPAIQY-----LEQQLERMKIELQQLKKQELDRIRK 452
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 105 KRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 164
K+ + + + K A PF PVD L + Y+ I +PMD STI+ K++ Y
Sbjct: 120 KKHAVTAVKAVKRLKDAKPFHKPVDPVALNIPLYFNYIPRPMDLSTIERKLNLD---AYE 176
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
++ D L+ N +K+N ++ + MA+++ FE+ L +
Sbjct: 177 TPEQVTDDFNLMVSNCIKFNGDKAVISQMARNIQASFEKHMLNM 220
>gi|345328058|ref|XP_003431230.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Ornithorhynchus anatinus]
Length = 2128
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 109 AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+ I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 2030 SMILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLET 2084
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DVRLVF N +N++ D+ ++ + FE+KW +
Sbjct: 2085 FALDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2125
>gi|403363335|gb|EJY81411.1| Bromodomain containing protein [Oxytricha trifallax]
Length = 726
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
+W F PVD E LG+ DY+ +I PMDF TIK ++ + Y ++E D++LVF N
Sbjct: 635 SWIFHEPVDPERLGVPDYFNIIRNPMDFGTIKQRL---NTNYYHRMQEFLDDMQLVFDNC 691
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQL 208
+K+N E +++ + K + E+F+ + QL
Sbjct: 692 LKFNGEENNIGKICKIVREEFKRLYEQL 719
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ +G + E +
Sbjct: 2110 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLS----SGQYSSPEYF 2163
Query: 171 A-DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
A DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2164 ALDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2199
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 2087 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YPNLETFA 2141
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
DVRLVF N +N++ D+ ++ + FE+KW +
Sbjct: 2142 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKWTDIF 2180
>gi|115391367|ref|XP_001213188.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194112|gb|EAU35812.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 816
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRL 175
+ +A PF +PVD L + Y+ +I+KPMD ST+++K+ TG Y N +E D+R
Sbjct: 479 HYAYAMPFYYPVDPVALNIPTYHSIIKKPMDLSTMQSKLK----TGQYENAKEFETDMRQ 534
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
+FKN K+N D V + L F KW +
Sbjct: 535 MFKNCFKFNIPGDPTFVAGQQLEAVFNAKWAE 566
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKY 183
+ PVD + + Y ++I +PMD TI+ K+ Y+ V+ + D L+ +NA+ +
Sbjct: 291 YREPVDPIKMNIPHYPQIITRPMDLGTIERKLKNNQ---YKTVQGVVDDFSLMVQNAVTF 347
Query: 184 NDERDDVHVMAKSLLEKFEEKWLQLL-PKVMEEEK 217
N V + L FE++ + L P +EE+K
Sbjct: 348 NGPDHLVSQEGQRLKATFEKQMVNLPKPDEVEEKK 382
>gi|297597282|ref|NP_001043715.2| Os01g0648700 [Oryza sativa Japonica Group]
gi|55296880|dbj|BAD68333.1| PSTVd RNA-biding protein-like [Oryza sativa Japonica Group]
gi|255673505|dbj|BAF05629.2| Os01g0648700 [Oryza sativa Japonica Group]
Length = 238
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 7/127 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ W F PVD L L DYY I PMD T++ + + Y +
Sbjct: 59 LLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRR---LERRRYADPWAFA 115
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN D V+ A L E FE W P V+ R + E K +L
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSVLAAPPRPPDAERKRRLSG 171
Query: 231 QLTQEAV 237
L + V
Sbjct: 172 LLPRLPV 178
>gi|222618950|gb|EEE55082.1| hypothetical protein OsJ_02819 [Oryza sativa Japonica Group]
Length = 264
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ ++ +H+ W F PVD L L DYY I PMD T++ +++ + Y +
Sbjct: 59 LLDKLLEHEDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERRR---YADPWAFA 115
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDM 230
ADVRL F NAM YN D V+ A L E FE W P V+ R + E K +L
Sbjct: 116 ADVRLTFNNAMSYNSAGDPVYESAAELSEIFEAGW----PSVLAAPPRPPDAERKRRLSG 171
Query: 231 QLTQEAV 237
L + V
Sbjct: 172 LLPRLPV 178
>gi|401840059|gb|EJT42981.1| BDF1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 695
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMD 147
+ ++ +R+Q+ + I +++ + A +PF+ PVD + L Y++ +++PMD
Sbjct: 313 YESKKPKSKRLQQAMKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMD 372
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
TI K++ + Y+ + + DVRLVFKN K+N + V++M L E F KW
Sbjct: 373 LGTIAKKLNDWE---YQTMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWAD 429
Query: 208 LLPKVME----EEKRQE--EEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQLENLR 260
P + E E+ R + E+ +++ E + TN A + L +L + ++L+ L+
Sbjct: 430 -RPNLDEYDSDEDSRNQGDYEDYESEYSESDIDETIITNPAIQYLEEQLARMKVELQQLK 488
Query: 261 ETVIQKCRK 269
+ ++K RK
Sbjct: 489 KQELEKIRK 497
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
+ + + K A PF+ PVD L + Y+ +++PMD STI+ K+ + Y +I D
Sbjct: 171 KAVKRLKDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKL---NVGAYEFPEQITED 227
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEAKAQL 228
L+ N++++N + MA+++ FE+ L + K V+ + +R + AQ
Sbjct: 228 FNLMVNNSIRFNGPNAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRR-----SSAQE 282
Query: 229 DMQLTQEAVQTNKAKELRS 247
D + QT+ + R+
Sbjct: 283 DAPIVIRRAQTHNGRPKRT 301
>gi|198456597|ref|XP_001360386.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
gi|198135670|gb|EAL24961.2| GA15830 [Drosophila pseudoobscura pseudoobscura]
Length = 265
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 110 AIFRQITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
AI R++ ++ AW F P+D LGLHDY+++++KPMD ++I+ ++ Y N
Sbjct: 27 AIIRKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAG---LYVNA 83
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
E DVRL+F N Y H MAK L FE + ++
Sbjct: 84 DEFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEI 125
>gi|401882488|gb|EJT46746.1| hypothetical protein A1Q1_04711 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701252|gb|EKD04402.1| hypothetical protein A1Q2_01286 [Trichosporon asahii var. asahii
CBS 8904]
Length = 744
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
A PF++PV + Y VI+KP+D IK +++ Y +V++I D RL+ NA
Sbjct: 415 ASPFLYPVSEIIAAIPSYTSVIKKPIDLLQIKQRLED---NVYEDVQQINNDFRLMISNA 471
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTN 240
++N D VH A +LL+ +EEKW L PK +E + Q E+ A+ D + + V
Sbjct: 472 RQFNPPGDAVHNAASALLQVWEEKWRSLPPK--QEIREQSEDIAEEFDDSEDEDKDVV-- 527
Query: 241 KAKELRSELNEVDMQLENLRETVIQKCRKM 270
+ KE ++E +D ++ +L + +K K+
Sbjct: 528 RLKEAKAERAALDREIADLEAKIARKPAKV 557
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-----------------YRNV 166
F PVD + Y++VI PMD T++ K+ D G Y +V
Sbjct: 227 FREPVDTVRFNIPHYHQVIAYPMDLGTVETKLVASDPRGPPKDKAKAARWDTSKGTYNSV 286
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
E+ DVR +++N K+N RD V A S L+ E+ L+ LP
Sbjct: 287 AEVTKDVRQIWENTRKFNG-RDHVVSQAASKLQDQYERALRTLP 329
>gi|115467990|ref|NP_001057594.1| Os06g0355500 [Oryza sativa Japonica Group]
gi|113595634|dbj|BAF19508.1| Os06g0355500 [Oryza sativa Japonica Group]
gi|215686882|dbj|BAG89732.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 378
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 235 RDDRELTAALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 291
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 292 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 339
>gi|326487788|dbj|BAK05566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 10/103 (9%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H W F VD + G+ DY++VI PMD T+K K+ K Y + +
Sbjct: 87 ILGKLMDHPGGWIFHKLVDPDLFGIPDYFDVIRNPMDLGTVKKKLTNKS---YLSTDDFA 143
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSL-------LEKFEEKWL 206
ADVRL F NAM YN VH +A+ L +E KW+
Sbjct: 144 ADVRLTFSNAMTYNPPGIQVHTVAEQLNIMFNLEWTSYERKWI 186
>gi|334183399|ref|NP_001185258.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|332195366|gb|AEE33487.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 573
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + + A PF PV+ E LG+ DY+++I+ PMDF TI N + G
Sbjct: 214 QELEDSLIVI-KKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGN 270
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV ++ N KYN + D + + K + + F + W
Sbjct: 271 KYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>gi|186491671|ref|NP_176101.3| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|332195364|gb|AEE33485.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 572
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + + A PF PV+ E LG+ DY+++I+ PMDF TI N + G
Sbjct: 214 QELEDSLIVI-KKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGN 270
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV ++ N KYN + D + + K + + F + W
Sbjct: 271 KYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>gi|312070279|ref|XP_003138073.1| bromodomain containing protein [Loa loa]
Length = 1342
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R++ R F + + + + AWPF+ PVD + + DYY++I++PMD TI NK+ +
Sbjct: 1227 RVRNTLRAFELLISEAMRQQIAWPFLKPVDAKTVP--DYYQIIKRPMDLRTIMNKLKQR- 1283
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y ++ AD RL+F+N YN+E ++ A L E EE++ ++L
Sbjct: 1284 --LYDTPDQVIADARLIFENCRIYNEEESEICKCATKLEEFMEERFSKVL 1331
>gi|334183397|ref|NP_001185257.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
gi|332195365|gb|AEE33486.1| DNA-binding bromodomain-containing protein [Arabidopsis thaliana]
Length = 582
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + + A PF PV+ E LG+ DY+++I+ PMDF TI N + G
Sbjct: 214 QELEDSLIVI-KKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGN 270
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV ++ N KYN + D + + K + + F + W
Sbjct: 271 KYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>gi|344301621|gb|EGW31926.1| hypothetical protein SPAPADRAFT_61027 [Spathaspora passalidarum
NRRL Y-27907]
Length = 330
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+ + +PF+ PVD L + +Y EV+++PMD TI+ K+ Y N E DVRLV
Sbjct: 5 HYNYNFPFLSPVDTVALNIPNYNEVVKEPMDLGTIQTKLAN---NQYENGDEFEHDVRLV 61
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
FKN +N E DV++M L F++KW
Sbjct: 62 FKNCYLFNPEGTDVNMMGHRLEAVFDKKW 90
>gi|156847379|ref|XP_001646574.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
gi|156117252|gb|EDO18716.1| hypothetical protein Kpol_1055p73 [Vanderwaltozyma polyspora DSM
70294]
Length = 605
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
+++Q+ + + +++ K+A +PF+ PVD L L Y+E+I+ P+D TI K
Sbjct: 216 SKKLQQAMKFCQTVVKELANKKYASFNYPFLEPVDPVALNLPTYFEIIKNPIDLGTISKK 275
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
++ + Y+++ E D++L+F N K+N E V++M L E + KW
Sbjct: 276 LNNWE---YKSMEEFETDIKLMFDNCFKFNPEGTIVNMMGHRLEEVYNSKW 323
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + + K + PF+ PVD L + Y+ I +PMD STI+ K+ + Y +I +
Sbjct: 67 IKAVKRLKDSKPFILPVDPAALNIPYYFNKITRPMDLSTIERKL---NANAYETPEQISS 123
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQ 231
D L+ N + +N + MA+++ FE+ L + K +EE +++ K D
Sbjct: 124 DFNLMVDNCIVFNGPTSMIAQMARNIQAAFEKHMLNMPAK--DEEPPKQQRRKKTDEDTP 181
Query: 232 LTQEAVQTNKAKELR 246
+ QT+ + R
Sbjct: 182 VVIRRAQTHNGRPKR 196
>gi|393906187|gb|EFO26002.2| bromodomain containing protein [Loa loa]
Length = 1381
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R++ R F + + + + AWPF+ PVD + + DYY++I++PMD TI NK+ +
Sbjct: 1266 RVRNTLRAFELLISEAMRQQIAWPFLKPVDAKTVP--DYYQIIKRPMDLRTIMNKLKQR- 1322
Query: 160 GTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
Y ++ AD RL+F+N YN+E ++ A L E EE++ ++L
Sbjct: 1323 --LYDTPDQVIADARLIFENCRIYNEEESEICKCATKLEEFMEERFSKVL 1370
>gi|297837677|ref|XP_002886720.1| hypothetical protein ARALYDRAFT_475449 [Arabidopsis lyrata subsp.
lyrata]
gi|297332561|gb|EFH62979.1| hypothetical protein ARALYDRAFT_475449 [Arabidopsis lyrata subsp.
lyrata]
Length = 585
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + A PF PV+ E LG+ DY+++I+ PMDF TI N + G
Sbjct: 218 QELEDSLTVI-KKIMKMDAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGN 274
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV ++ N KYN + D + + K + + F + W
Sbjct: 275 KYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 318
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 2027 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFA 2081
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2082 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2116
>gi|395519612|ref|XP_003763937.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B,
partial [Sarcophilus harrisii]
Length = 1045
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ AWPF+ PV+++ + Y +VI+KPMDFSTI+ K+ Y N+
Sbjct: 949 ILTEMETHEDAWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLSSGQ---YSNLETFA 1003
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ ++ + FE+KW
Sbjct: 1004 LDVRLVFDNCETFNEDDSDIGRAGHNMRKYFEKKW 1038
>gi|326491431|dbj|BAJ94193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 577
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY +VI+ PMDF TI ++
Sbjct: 229 RDEKELAAALEAI-KKVMKVDAAEPFNTPVDPIALGIPDYLDVIDTPMDFGTICQDLE-- 285
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G+ Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 286 RGSKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKAFMKNWL 333
>gi|365759249|gb|EHN01049.1| Bdf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 695
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMD 147
+ ++ +R+Q+ + I +++ + A +PF+ PVD + L Y++ +++PMD
Sbjct: 313 YESKKPKSKRLQQAMKFCQNILKELVAKRHASYNYPFLEPVDPVSMNLPTYFDYVKEPMD 372
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
TI K++ + Y+ + + DVRLVFKN K+N + V++M L E F KW
Sbjct: 373 LGTIAKKLNDWE---YQTMEDFERDVRLVFKNCYKFNPDGTIVNMMGHRLEEVFNSKWAD 429
Query: 208 LLPKVME----EEKRQE--EEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQLENLR 260
P + E E+ R + E+ +++ E + TN A + L +L + ++L+ L+
Sbjct: 430 -RPNLDEYDSDEDSRNQGDYEDYESEYSESDIDEIIITNPAIQYLEEQLARMKVELQQLK 488
Query: 261 ETVIQKCRK 269
+ ++K RK
Sbjct: 489 KQELEKIRK 497
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 113 RQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYAD 172
+ + + K A PF+ PVD L + Y+ +++PMD STI+ K+ + Y +I D
Sbjct: 171 KAVKRLKDARPFLQPVDPVKLDIPFYFNYVKRPMDLSTIERKL---NVGAYEFPEQITED 227
Query: 173 VRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK----VMEEEKRQEEEEAKAQL 228
L+ N++++N + MA+++ FE+ L + K V+ + +R + AQ
Sbjct: 228 FNLMVNNSIRFNGPNAGISQMARNIQASFEKHMLNMPAKDAAPVVAKGRR-----SSAQE 282
Query: 229 DMQLTQEAVQTNKAKELRS 247
D + QT+ + R+
Sbjct: 283 DAPIVIRRAQTHNGRPKRT 301
>gi|223462537|gb|AAI50815.1| Baz2b protein [Mus musculus]
Length = 2158
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 2062 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFA 2116
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2117 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2151
>gi|148695007|gb|EDL26954.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2193
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ H+ +WPF+ PV+++ + Y +VI+KPMDFSTI+ K++ Y N
Sbjct: 2097 ILTEMETHEDSWPFLLPVNLKLV--PGYKKVIKKPMDFSTIREKLNNGQ---YPNFETFA 2151
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVRLVF N +N++ D+ S+ + FE+KW
Sbjct: 2152 LDVRLVFDNCETFNEDDSDIGRAGHSMRKYFEKKW 2186
>gi|299471129|emb|CBN78987.1| ankyrin repeat-containing protein [Ectocarpus siliculosus]
Length = 732
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 124 FMHPVDVEGLGLHDYY-EVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
F +PV GL Y +VI+ PMD T+ ++D K YR R+ ADVRLVF NA
Sbjct: 234 FQYPVPPNFRGLRGMYADVIKSPMDLGTVMKRIDSK----YRTARDCIADVRLVFSNAKD 289
Query: 183 YNDERDDVHVMAKSLLEKFE 202
+N + D VH +A SL KFE
Sbjct: 290 FNPDTDPVHALAASLSGKFE 309
>gi|357144397|ref|XP_003573278.1| PREDICTED: uncharacterized protein LOC100831261 [Brachypodium
distachyon]
Length = 593
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + + A PF PVD LG+ DY +VI+ PMDF TI + ++
Sbjct: 241 RDEKELAAALEAI-KKVMKIEAAEPFNTPVDPVALGIPDYLDVIDTPMDFGTICHDLE-- 297
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 298 HGNKYINSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKAFMKNWL 345
>gi|125559896|gb|EAZ05344.1| hypothetical protein OsI_27549 [Oryza sativa Indica Group]
Length = 590
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 234 RDDRELTAALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 290
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 291 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|115474431|ref|NP_001060812.1| Os08g0109500 [Oryza sativa Japonica Group]
gi|42408376|dbj|BAD09527.1| DNA-binding protein family-like [Oryza sativa Japonica Group]
gi|113622781|dbj|BAF22726.1| Os08g0109500 [Oryza sativa Japonica Group]
Length = 590
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 234 RDDRELTAALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 290
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 291 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|195123201|ref|XP_002006096.1| GI20845 [Drosophila mojavensis]
gi|193911164|gb|EDW10031.1| GI20845 [Drosophila mojavensis]
Length = 468
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
AG ++ + ++ H ++ PFM PVD E L + YY VIE PMD TI ++
Sbjct: 29 AGEYTNKIHHIKMYLLEELPHHDFSLPFMEPVDTEALKVPSYYTVIEHPMDMGTIIKRV- 87
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
+ Y NV E+ D+RLV N K+N V+ + L E F++ + LPK EE
Sbjct: 88 --ENNYYHNVNELVYDIRLVISNCFKFNMPGSLVYRNGQELEELFKQVY-DSLPK--GEE 142
Query: 217 KRQEEEEAKAQLDMQ 231
+E+A+ L M
Sbjct: 143 VPCSKEQAEKSLTMH 157
>gi|300701921|ref|XP_002995060.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
gi|239603745|gb|EEQ81389.1| hypothetical protein NCER_102192 [Nosema ceranae BRL01]
Length = 368
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 92 HREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
H+ + G+ +Q+LKR ++ A+PF+ PVD G+ DY I+ PMD ST+
Sbjct: 11 HQMKYCGQILQKLKR-----------NQNAFPFLEPVDPIKYGIPDYPLKIKYPMDLSTV 59
Query: 152 KNKMDGKDGTGYRNVREIY-ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
K K+D K N E++ +D++L+F N YN DV+++ K L E ++E + L
Sbjct: 60 KKKLDSK----VYNTPEMFDSDIKLMFNNCYTYNHPSSDVYLLGKKLEEYYDELFALLPM 115
Query: 211 KVMEEEKRQE 220
++ ++ KR E
Sbjct: 116 EISKKRKRPE 125
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 22/162 (13%)
Query: 78 RHVASIEKQQQDAFHREEAAGRRMQELKRQFAA-IFRQITQHKW---AWPFMHPVDVEGL 133
R S+E+ +Q R +G M+ +F + +I + K+ WPF+ PVD E L
Sbjct: 123 RPEMSLERSKQ--VKRTIRSGDTMKIDDYEFCIEVLNEILKSKYKGFVWPFLEPVD-ENL 179
Query: 134 GLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHV- 192
L YYE+I+ PMD +IK+K+D K Y+ V E D+RL+ +N K+ND+ DV+
Sbjct: 180 -LPQYYEIIKNPMDLKSIKDKLDLK---SYKGVDEFSNDLRLITENCHKFNDQGSDVYRC 235
Query: 193 ------MAKSLLEKFEEKWLQLLPKVMEEEKR--QEEEEAKA 226
+ SLL +E K L+ +++E +K+ Q +E KA
Sbjct: 236 GTELNELVNSLLANYEPKDLK--GRILELKKKIVQYTKEVKA 275
>gi|159124832|gb|EDP49950.1| histone acetyltransferase GCN5, putative [Aspergillus fumigatus
A1163]
Length = 355
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
DA RE G E +R QI HK WPF+ P++ + + DYY VI PMD
Sbjct: 233 DALSREPRHGHYFNEFRR----FLNQIQNHKQGWPFLQPLNKDEVP--DYYNVITSPMDL 286
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
STI+ K++ D Y +E+ D +L+FKN +YND V+ LEK+ ++
Sbjct: 287 STIEEKLERDD---YATPKELVHDFKLIFKNCRQYNDA-TTVYAKCAVKLEKYMWSLIKD 342
Query: 209 LP 210
+P
Sbjct: 343 IP 344
>gi|449435136|ref|XP_004135351.1| PREDICTED: uncharacterized protein LOC101220569 [Cucumis sativus]
gi|449503289|ref|XP_004161928.1| PREDICTED: uncharacterized LOC101220569 [Cucumis sativus]
Length = 564
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
+ +++ + A PF PV+ LG+ DY++VI+ PMDF TI + ++ +G Y N +++
Sbjct: 201 VIKKVMKMDAAEPFNVPVNPVALGIPDYFDVIDTPMDFGTICSNLE--NGVKYMNSEDVF 258
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
DVR +++N KYN++ D + + + + + F + W
Sbjct: 259 KDVRYIWENCYKYNNKGDYILDLMRRVKKNFSKYW 293
>gi|405951463|gb|EKC19373.1| Bromodomain adjacent to zinc finger domain protein 2B [Crassostrea
gigas]
Length = 2317
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 14/153 (9%)
Query: 57 KDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQELKRQFAAIFRQIT 116
KD++ N S + S EK + + EK++Q A E+ R+ I ++
Sbjct: 2158 KDSDAGNKSTNESTPSEKPEKKRGKDQEKKKQAAEQSEDMTVCRL---------ILTEMD 2208
Query: 117 QHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLV 176
+H WPF+ PV+ + + Y I +PMDF+T+KNK+ +D Y+ + ADVRL+
Sbjct: 2209 KHDDGWPFLKPVNFKQFPAYKKY--IRQPMDFTTMKNKL--RDNQ-YKTRGDFAADVRLI 2263
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLL 209
F N +N++ +V ++ + FE +W QLL
Sbjct: 2264 FNNCQTFNEDDSEVGRAGHNMRKFFEVRWKQLL 2296
>gi|396081966|gb|AFN83580.1| putative bromodomain-containing transcription factor
[Encephalitozoon romaleae SJ-2008]
Length = 370
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 25/238 (10%)
Query: 94 EEAAGRRMQELKRQFAA-IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIK 152
E +AG + E + ++ + + +I ++ A PF+ PVD LG+ DY E I+ PMD STI+
Sbjct: 5 EASAGSILAEHQLKYCSQVLTRIKRNSNAPPFLEPVDPVKLGIPDYPEKIKNPMDLSTIR 64
Query: 153 NKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKV 212
K+D K+ +G + D++L+F N YN VH M K+L + + + +V
Sbjct: 65 KKLDAKEYSGPEGFDD---DMKLMFNNCYTYNPPGTIVHDMGKALESAYNDMMAGMPQEV 121
Query: 213 MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAK--ELRSE-----------------LNEVD 253
++ K+ E ++ + V+ KA+ E SE L VD
Sbjct: 122 SKKRKKSEIPVTGRSKQVKRNAKPVEGMKAEDYEFCSEVLSDLVKPKHKSYNWPFLEPVD 181
Query: 254 MQLENLRETVIQKCRKMSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATAQEV 311
L +VI++ M + KN S E+ + LE++ EN F+A EV
Sbjct: 182 GDLVPGYYSVIKE--PMDIQTMKNKLDQRKYHSVEEFGRDLELIVENCKKFNAPGTEV 237
>gi|321456598|gb|EFX67701.1| hypothetical protein DAPPUDRAFT_261209 [Daphnia pulex]
Length = 200
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
Query: 97 AGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMD 156
GR +L+ + + ++ AWPF PVD + LGL DY++VI+ PMD T+ +++
Sbjct: 30 PGRVTNQLQYLQRTVLPALWDYRHAWPFHEPVDTKKLGLIDYFQVIKFPMDLGTVMKRLE 89
Query: 157 GKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y + + D+ ++F N YND ++D+ M + LEK + L +PKV EE
Sbjct: 90 NH---YYWSALDCIRDINILFANCYTYNDPKEDLVWMGQQ-LEKIFRRQLARMPKVEMEE 145
>gi|12321252|gb|AAG50696.1|AC079604_3 hypothetical protein [Arabidopsis thaliana]
Length = 769
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + + A PF PV+ E LG+ DY+++I+ PMDF TI N + G
Sbjct: 214 QELEDSLIVI-KKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFE--KGN 270
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV ++ N KYN + D + + K + + F + W
Sbjct: 271 KYMNSEDVYKDVNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 314
>gi|291225093|ref|XP_002732536.1| PREDICTED: bromodomain adjacent to zinc finger domain, 1B-like
[Saccoglossus kowalevskii]
Length = 1438
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++T+HK +WPF PV E + DYY++I PMDF T+KNK + Y++V
Sbjct: 1301 ILNKLTRHKDSWPFRKPV--EKVEAPDYYDIISDPMDFQTMKNKCLCIE---YKSVDAFM 1355
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
D++LVF NA YN +V +SL E F E + LP
Sbjct: 1356 EDIKLVFNNAEIYNKTGSEVLQCQESLEEHFAELVEKFLP 1395
>gi|255089248|ref|XP_002506546.1| bromodomain-containing protein [Micromonas sp. RCC299]
gi|226521818|gb|ACO67804.1| bromodomain-containing protein [Micromonas sp. RCC299]
Length = 208
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 103 ELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG 162
+LK + + + +H++ + F PVD L + DY++V++ PMD T+ NK+ ++G
Sbjct: 80 DLKGRLEKVINALQRHRFYFIFAQPVDPVALNIPDYFDVVKTPMDLGTVANKV--RNGAY 137
Query: 163 YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEE 222
+V + D RLVF N YN D M ++ ++F++KW++ L V ++E R+ +
Sbjct: 138 KGDVTDFEDDARLVFSNCRAYNPPGSDAATMGDAVEKEFDKKWIE-LGFVFKDETREMPK 196
Query: 223 EAKAQLD 229
A D
Sbjct: 197 PPGAGGD 203
>gi|195149830|ref|XP_002015858.1| GL11280 [Drosophila persimilis]
gi|194109705|gb|EDW31748.1| GL11280 [Drosophila persimilis]
Length = 265
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 85/193 (44%), Gaps = 9/193 (4%)
Query: 110 AIFRQITQHKW---AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
AIF ++ ++ AW F P+D LGLHDY+++++KPMD ++I+ ++ Y N
Sbjct: 27 AIFIKLFSSQYKKLAWIFYEPIDAPYLGLHDYHKIVKKPMDLNSIRTRLQAG---LYVNA 83
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKA 226
E DVRL+F N Y H MAK L FE + ++ + E + +
Sbjct: 84 DEFVRDVRLMFDNTYLYTTPDHLCHQMAKKLQAIFEAMFFEI--ASTDSSDTITETDVSS 141
Query: 227 QLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTALTRLS 286
+ +A N K+ ++ Q R R + +E +LG L L
Sbjct: 142 MFPIATIPDA-PINPHKDGGVKMTRARRQQLQSRSANEAAVRPWTAKENNHLGDRLQELK 200
Query: 287 PEDLCKALEIVAE 299
E L + + I+ E
Sbjct: 201 GEVLHRVIHIIKE 213
>gi|449017606|dbj|BAM81008.1| probable histone acetyltransferase GCN5 [Cyanidioschyzon merolae
strain 10D]
Length = 455
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 4/105 (3%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+ L+++ + QI H AWPF+ PVD + G ++YYE+I+ PMD TI+ ++D G
Sbjct: 353 LAALQKELQQVLNQIKSHSSAWPFLEPVDPQETGAYNYYEIIKNPMDLRTIQERLD--SG 410
Query: 161 TGYRNVREIY-ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
Y N R+I+ AD+ + KNA+ YN + +A SL + K
Sbjct: 411 WYYVN-RDIFLADLNRMVKNAIDYNGPGHYISELALSLKRFYSSK 454
>gi|222639784|gb|EEE67916.1| hypothetical protein OsJ_25776 [Oryza sativa Japonica Group]
Length = 678
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 227 RDDRELTAALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 283
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 284 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 331
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 101 MQELKRQF------AAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
M+ +K+ F A ++ + ++ A PF PVD LG+ DY+++I+ PMDF TI
Sbjct: 319 MKRVKKGFMKNWLAAGLYSDVQEN--AEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQN 376
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
++ G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 377 LE--RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 426
>gi|225561393|gb|EEH09673.1| histone acetyltransferase GCN5 [Ajellomyces capsulatus G186AR]
Length = 415
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
D RE GR EL+R QI HK AWPF++PV+ + + DYY VI PMD
Sbjct: 296 DKLAREPRHGRHFNELRR----FLNQIQNHKQAWPFLNPVNRDEVP--DYYNVIVSPMDL 349
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
ST++ +++ Y + +++ AD++L+F N +YND V+ LEK+ ++
Sbjct: 350 STMEERLECD---SYPSPKDLVADLKLIFSNCRQYNDA-STVYAKCAVKLEKYMWSLIKK 405
Query: 209 LP 210
+P
Sbjct: 406 IP 407
>gi|154282515|ref|XP_001542053.1| histone acetyltransferase GCN5 [Ajellomyces capsulatus NAm1]
gi|150410233|gb|EDN05621.1| histone acetyltransferase GCN5 [Ajellomyces capsulatus NAm1]
Length = 414
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 89 DAFHREEAAGRRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDF 148
D RE GR EL+R QI HK AWPF++PV+ + + DYY VI PMD
Sbjct: 295 DKLAREPRHGRHFNELRR----FLNQIQNHKQAWPFLNPVNRDEVP--DYYNVIVSPMDL 348
Query: 149 STIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
ST++ +++ Y + +++ AD++L+F N +YND V+ LEK+ ++
Sbjct: 349 STMEERLECD---SYPSPKDLVADLKLIFSNCRQYNDA-STVYAKCAVKLEKYMWSLIKK 404
Query: 209 LP 210
+P
Sbjct: 405 IP 406
>gi|125555277|gb|EAZ00883.1| hypothetical protein OsI_22908 [Oryza sativa Indica Group]
Length = 571
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R QEL+ +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 219 RSSQELE-----AIKKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 271
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 272 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 319
>gi|328866095|gb|EGG14481.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 2116
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 110 AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREI 169
I+ QI + K A F +PVD G+ Y ++I+ PMD T+K K+D Y+ ++E
Sbjct: 505 GIYTQIYKRKNAEVFHYPVDPVADGVPTYLDIIKNPMDLGTMKTKLDNG---SYKTIKEF 561
Query: 170 YADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
AD+RL+F NA+ +N + + +AKSLL+ F K+ Q
Sbjct: 562 AADMRLMFINALTFNLDGTPIWKLAKSLLQNFNTKFGQ 599
>gi|145539752|ref|XP_001455566.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423374|emb|CAK88169.1| unnamed protein product [Paramecium tetraurelia]
Length = 497
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 115 ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVR 174
I + K A F PVD + G+ DYYE++ KPMDF T+KNK+ + Y +E Y DV
Sbjct: 401 IWKAKGAHLFHQPVDQKKYGISDYYEIVTKPMDFGTVKNKL---NSNVYSACQEFYDDVM 457
Query: 175 LVFKNAMKYNDERDDVHVMAKSLLEKFEEKW-LQLLPKVM 213
VF+N + YN E +V + ++ ++FE + L LL K +
Sbjct: 458 QVFENCILYNGETSEVGQIGLNIKQEFENQLELTLLKKYL 497
>gi|297840767|ref|XP_002888265.1| hypothetical protein ARALYDRAFT_475462 [Arabidopsis lyrata subsp.
lyrata]
gi|297334106|gb|EFH64524.1| hypothetical protein ARALYDRAFT_475462 [Arabidopsis lyrata subsp.
lyrata]
Length = 582
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 102 QELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGT 161
QEL+ I ++I + A PF PV+ E LG+ DY+E+I+ PMDF TI N + +
Sbjct: 223 QELEDSLTVI-KKIMKMDAADPFNAPVNPEALGIPDYFEIIKTPMDFGTICNNFEKSN-- 279
Query: 162 GYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
Y N ++Y DV+ ++ N KYN + D + + K + + F + W
Sbjct: 280 KYMNSEDVYKDVQYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYW 323
>gi|195997813|ref|XP_002108775.1| hypothetical protein TRIADDRAFT_52097 [Trichoplax adhaerens]
gi|190589551|gb|EDV29573.1| hypothetical protein TRIADDRAFT_52097 [Trichoplax adhaerens]
Length = 950
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
L QFA++ WPF PVD E LGL DYY+ I++PM IK K + Y
Sbjct: 61 LSNQFASM---------TWPFREPVDTEKLGLWDYYDRIKQPMCLVWIKKKF---YDSSY 108
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKR 218
+ E+ +D+RL+ +N +YN + + + + L + E+K + L PK + ++ R
Sbjct: 109 TTINEVLSDIRLMIENCYRYNGSKHWISKLGQKLEKTIEQK-INLFPKSLRDKLR 162
>gi|348511394|ref|XP_003443229.1| PREDICTED: hypothetical protein LOC100690815 [Oreochromis niloticus]
Length = 3314
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 9/101 (8%)
Query: 104 LKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGY 163
LKR I R + HK AWPF+ PVD DYY VI++PMDFST++ ++ + Y
Sbjct: 3203 LKR----ILRSLQSHKMAWPFLEPVDPHDAP--DYYRVIKEPMDFSTMETRLQKRH---Y 3253
Query: 164 RNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEK 204
+ E ADV +F N YN + A++L F +K
Sbjct: 3254 HKLTEFVADVTKIFDNCRYYNPNDTPFYQCAETLEAFFVQK 3294
>gi|290991817|ref|XP_002678531.1| histone acetyltransferase gcn5 [Naegleria gruberi]
gi|284092144|gb|EFC45787.1| histone acetyltransferase gcn5 [Naegleria gruberi]
Length = 420
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 100 RMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKD 159
R +L F + ++ +H+ +WPF+ PVD E + DYY+VI+ P+D STI+ ++ KD
Sbjct: 312 RDHKLHAAFVEVLEKLKRHEHSWPFLEPVDPEEV--PDYYDVIKLPIDLSTIEQRLK-KD 368
Query: 160 GTGYRNVREIY-ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEE 216
Y ++I+ +DVRL+F+N YN E+ + + A K EE + ++ K+++++
Sbjct: 369 ---YYRTKDIFVSDVRLIFENCRTYNSEQTEYYSAA----NKLEEYFKTIMSKILQQK 419
>gi|222635545|gb|EEE65677.1| hypothetical protein OsJ_21293 [Oryza sativa Japonica Group]
Length = 579
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 3/108 (2%)
Query: 99 RRMQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGK 158
R +EL AI +++ + A PF PVD LG+ DY+++I+ PMDF TI ++
Sbjct: 234 RDDRELTAALEAI-KKVMKMDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQNLE-- 290
Query: 159 DGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL 206
G Y N ++Y DV+ ++ N KYN + D + + K + + F + WL
Sbjct: 291 RGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGFMKNWL 338
>gi|150866686|ref|XP_001386360.2| hypothetical protein PICST_73625 [Scheffersomyces stipitis CBS
6054]
gi|149387942|gb|ABN68331.2| transcription factor [Scheffersomyces stipitis CBS 6054]
Length = 636
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
Query: 105 KRQFAAIFRQITQ----------HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
K++FAA R +Q + + +PF+ PVD L + +Y++V+++PMD TI++K
Sbjct: 298 KKKFAAELRFCSQTVKELMSKKHNGYNFPFVAPVDPVALNIPNYFKVVKEPMDLGTIQSK 357
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKW 205
+ Y N E D+RLVFKN +N E +V++M L F+++W
Sbjct: 358 LTNNQ---YENGDEFERDIRLVFKNCYIFNPEGSEVNMMGHRLEAVFDKRW 405
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ I + + A PF+HPVD+ L + YY I +PMD STI+ K+ Y + +I
Sbjct: 142 IKAIKRLRDAVPFLHPVDIVKLNIPFYYNYIPRPMDLSTIETKV---HVNAYEDSNQIVE 198
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVM 213
D L+ N K+N E + MA ++ FE+ L PKV+
Sbjct: 199 DFNLMVANCKKFNGENAGISKMADNIQAHFEKHMLNFPPKVL 240
>gi|405123328|gb|AFR98093.1| bromodomain transcription factor [Cryptococcus neoformans var.
grubii H99]
Length = 765
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 7/159 (4%)
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMK 182
PF++PV+ + DY VI++P+DF+ IKNK+ + T Y +V ++ D+RL+ NA K
Sbjct: 424 PFLYPVEKIIEEVPDYATVIKRPIDFNIIKNKL--AENT-YEDVNQVDDDMRLMVANAQK 480
Query: 183 YNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQEAVQTNKA 242
+N +VH A LL+ +EEKW + +P +E E+ A+A D ++ Q
Sbjct: 481 FNPPGHEVHTSATQLLQIWEEKW-RTVPAKVETRDSSEDPMAEAFDDYSSDEDNAQL--- 536
Query: 243 KELRSELNEVDMQLENLRETVIQKCRKMSTEEKKNLGTA 281
+ L S++ ++ Q+ LR + ++ ++ K TA
Sbjct: 537 RSLESQVVALNQQISALRSKMTKRRAARGSKSKSKPKTA 575
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 31/119 (26%)
Query: 115 ITQHKW--------------AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
+TQHK+ A+ F+ PVD + Y+ VI+ PMD T++ K+ D
Sbjct: 209 LTQHKYMLNAVRSLKKRLPDAYNFLVPVDTVRFNIPHYHTVIDTPMDLGTVETKLIVSDP 268
Query: 161 TG-----------------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
G Y NV E+ DVR +++N+ K+N + V MA L E FE
Sbjct: 269 RGPPKDKSKMSKWDTSKGKYNNVAEVTEDVRRIWENSRKFNGKEHPVSQMATRLEEAFE 327
>gi|300176029|emb|CBK23340.2| unnamed protein product [Blastocystis hominis]
Length = 192
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 101 MQELKRQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDG 160
M L Q I + Q+ + PF+ PV + GL DY ++I +PMD T+ + D
Sbjct: 1 MASLLDQCKVILNEFLQNPDSKPFLQPVLWKEWGLDDYPKIIRQPMDLGTVNMHLTNGD- 59
Query: 161 TGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQE 220
Y++V E D+RL+++N YN E DV+ + K L E FEE++ ++ ++ E E+
Sbjct: 60 --YKDVYEFAYDMRLIWRNCCTYNQEISDVYKVGKKLSELFEERFSKIEEQIPEAEREPS 117
Query: 221 EEEAKAQLD 229
E+ + +D
Sbjct: 118 IEQKRLFVD 126
>gi|167526004|ref|XP_001747336.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774171|gb|EDQ87803.1| predicted protein [Monosiga brevicollis MX1]
Length = 1632
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Query: 73 EKLKDRHVASIEKQQQDAFHREEAAGRRMQE-----LKRQFAAIFRQITQHKWAWPFMHP 127
+KL ++ + I+K +QD + +A R+++E LK F+ + ++ A F+ P
Sbjct: 573 QKLAEK-IYKIKKAKQDR-QKRQATSRQIKEWPRDELKHHFSPVLERLKGMSAAECFLRP 630
Query: 128 VDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDER 187
VD L + DY+E+I+KPMD STI++K++ GT Y++ E D+RL+FKNA YN +
Sbjct: 631 VDPIELNIPDYFEIIKKPMDLSTIEDKLE--KGT-YKDPWEFCDDMRLMFKNAWTYNPKN 687
Query: 188 DDVHVMAKSLLEKFEE 203
V+ + FE+
Sbjct: 688 HVVYKFTNEVSSVFED 703
>gi|409051415|gb|EKM60891.1| hypothetical protein PHACADRAFT_247110 [Phanerochaete carnosa
HHB-10118-sp]
Length = 783
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 53/262 (20%)
Query: 116 TQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRL 175
T A PF PVD L + Y ++I+KPMD ST++ K+D + Y +E D +L
Sbjct: 441 THWNIAHPFYEPVDWVKLEIPSYPKLIKKPMDLSTMRRKLDNSE---YSTPKEFNDDFKL 497
Query: 176 VFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEAKAQLDMQLTQE 235
+ +N +N V+ + L + F+EKW L P E E++E +A D +LT
Sbjct: 498 IIRNCFTFNPAGTPVNTAGQELQQLFDEKWKNLPPLRRTPESDDEDDEDEADSDDELT-- 555
Query: 236 AVQTNKAKELRSELNEVDMQLENLRE---------------------------------- 261
V T K EL S+L ++ L +L++
Sbjct: 556 -VITGKITELESQLESMNRALVSLKQKREKLIKEKKKAIEKRPPPPPVASTSKSTPKTNG 614
Query: 262 -TVIQKCRK------------MSTEEKKNLGTALTRLSPEDLCKALEIVAENNPSFHATA 308
T RK +S E+KK L + +L + L K ++I+ E P +
Sbjct: 615 KTAPPVNRKKPSKKPIEDNDVLSFEQKKELSDTIGKLDGQKLEKVIQIIHEGVPEIRDST 674
Query: 309 QEVDLDMDAQSELTLWRLKVFV 330
+E++L++D L +L FV
Sbjct: 675 EEIELEIDTLPAAVLTKLYNFV 696
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 11/133 (8%)
Query: 87 QQDAFHREEAAGRRMQELK--RQFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEK 144
+D++ +A G + R + R + + K A PF+ PVDV L + Y +++++
Sbjct: 210 HEDSYDANKAKGPSTFSVPQHRFCVSTIRTLKKMKAAAPFLKPVDVVALNIPHYPQIVKQ 269
Query: 145 PMDFSTIKNKMDG---------KDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAK 195
PMDFSTI+ K+ Y + E ADVRL+F N + +N + ++K
Sbjct: 270 PMDFSTIERKLQSSTPQKSDPNPSNPRYHHADEFIADVRLIFSNCLAFNGTDHFITQLSK 329
Query: 196 SLLEKFEEKWLQL 208
+ E F+++ L
Sbjct: 330 QVEEVFDKQLKNL 342
>gi|50285717|ref|XP_445287.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524591|emb|CAG58193.1| unnamed protein product [Candida glabrata]
Length = 643
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 90/178 (50%), Gaps = 9/178 (5%)
Query: 98 GRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNK 154
+ +Q + + R++ K+A +PF+ PVD L Y++ +++PMD T+ K
Sbjct: 280 SKSLQRAMKFCQGVVRELMSKKYASFNYPFLEPVDPVALNCPTYFDYVKEPMDLGTVSKK 339
Query: 155 MDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWL--QLLPKV 212
+ + Y N+ + D+RL+F+N +N + V++M L + F KW L V
Sbjct: 340 LSNWE---YENLDQAEHDIRLIFQNCYAFNPDGTIVNMMGHRLEDIFNTKWADRPLYSDV 396
Query: 213 -MEEEKRQEEEEAKAQLDMQLTQEAVQTNKAKELRSELNEVDMQLENLRETVIQKCRK 269
EE + ++E + D+++ + ++ + L +L + ++L+ L++ ++K RK
Sbjct: 397 ESEEAESAYDDEESDESDVEIDETSITNPAIQYLEDQLERMKVELQQLKKQELEKIRK 454
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + + K A PF+ PVD L + Y+ I++PMD TI+ K+ + Y +I
Sbjct: 120 IKAVKRLKDARPFLQPVDPVALNIPLYFNFIKRPMDLQTIERKL---NANAYETPEQITE 176
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
D L+ +N+ K+N + M +++ FE+ L +
Sbjct: 177 DFNLMVENSAKFNGPTAVITQMGRNIQAAFEKHMLNM 213
>gi|300175329|emb|CBK20640.2| unnamed protein product [Blastocystis hominis]
Length = 249
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 119 KWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVF 177
K+A PF+HPVD L + DY+++I+ PMDF TI ++ +G+ T V+ + LVF
Sbjct: 110 KFASPFLHPVDPVALNIPDYFDIIKNPMDFGTIYQRLINGQITTEAEYVKLM----ELVF 165
Query: 178 KNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
NA+ YN +DDV MA L F++++ Q+
Sbjct: 166 TNAITYNKPQDDVAFMAHELQAYFDKEYTQM 196
>gi|443893835|dbj|GAC71291.1| histone acetyltransferase SAGA/ADA, catalytic subunit PCAF/GCN5
[Pseudozyma antarctica T-34]
Length = 742
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 17/121 (14%)
Query: 101 MQELKRQ------FAA---IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTI 151
M EL R+ FA I ++ H AWPF++PV+ G + DYYEVI+ PMD ST+
Sbjct: 626 MDELSRRPKRGPHFAVMRHILVELNGHGSAWPFVNPVN--GDEVTDYYEVIKNPMDLSTM 683
Query: 152 KNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
+ K++ Y NV E+ AD +L+F N YN + + + LEKF ++ LLPK
Sbjct: 684 EAKLENNQ---YANVDELTADAQLIFDNCRAYNPASSP-YAKSATKLEKFLKE--TLLPK 737
Query: 212 V 212
V
Sbjct: 738 V 738
>gi|315043062|ref|XP_003170907.1| bromodomain containing protein [Arthroderma gypseum CBS 118893]
gi|311344696|gb|EFR03899.1| bromodomain containing protein [Arthroderma gypseum CBS 118893]
Length = 911
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 124 FMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG-YRNVREIYADVRLVFKNAMK 182
F PVD L + Y+ VI+KPMD T+K+K+ TG Y N +E AD+R +FKN K
Sbjct: 574 FYDPVDPVALNIPTYHNVIKKPMDLGTMKSKL----ATGQYENAKEFEADMRQIFKNCYK 629
Query: 183 YNDERDDVHVMAKSLLEKFEEKWLQ 207
+N D V+ K E F+ KW Q
Sbjct: 630 FNIVGDPVYTAGKQTEEIFDRKWSQ 654
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 108 FAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVR 167
F F+ + + A F PVD+ L + Y++ +++PMD T++ K+ + YR +
Sbjct: 346 FTRTFQNLKRLSDAQMFKFPVDIVKLNIPTYFDFVKQPMDLQTMEGKLKSET---YRTPQ 402
Query: 168 EIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+I D +L+ N+ +N V + L E F+
Sbjct: 403 DIIDDFKLMVNNSKVFNGPAHVVSLAGDRLYENFQ 437
>gi|393218547|gb|EJD04035.1| Bromodomain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 795
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 23/185 (12%)
Query: 45 QKLNDVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQQQDAFHREEAAGRRMQEL 104
+KL+D +Q L P + +S A E DR Q + A + +
Sbjct: 206 RKLSDADQASLAHSPAPPPPTTVLSTATE---DRSATPSPSQDRKA---------TLSQA 253
Query: 105 KRQFA-AIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTG- 162
+ +F + R + + K A PF++PVD L + Y +++ PMDF+TI K+ +
Sbjct: 254 QYRFCVSTVRNLRKLKDATPFLNPVDPVALNIPHYLSIVKHPMDFATIDRKLVASNPVKP 313
Query: 163 --------YRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVME 214
Y E ADVRL+F NA +N V M K +E +K ++ LP E
Sbjct: 314 DSNPANPRYLTADEFIADVRLMFSNAYTFNGPEHVVTQMGKR-VEAIFDKQIKQLPPPAE 372
Query: 215 EEKRQ 219
E K Q
Sbjct: 373 EPKPQ 377
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
A PF PVD LG+ Y +++++PMD T++ K+D ++ Y N + D L+ +N
Sbjct: 475 ASPFYEPVDAVKLGIPHYPKIVKRPMDLGTMRKKLDNRE---YPNAAKFKEDFALMIRNC 531
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLP 210
M +N VH + FEEKW L P
Sbjct: 532 MAFNPVGTAVHDAGVEIQRVFEEKWSHLPP 561
>gi|26332264|dbj|BAC29862.1| unnamed protein product [Mus musculus]
Length = 657
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 9/101 (8%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +++++WPF PV + DYY+VIE PMDF TI+NK + YR+V+E
Sbjct: 525 ILHKLVKYRFSWPFREPVTRDEA--EDYYDVIEHPMDFQTIQNKCSCGN---YRSVQEFL 579
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D++ VF NA YN HV+ S +EK E+ L LL K
Sbjct: 580 TDMKQVFANAELYNCR--GSHVL--SCMEKTEQCLLALLQK 616
>gi|256269147|gb|EEU04482.1| Bdf1p [Saccharomyces cerevisiae JAY291]
Length = 686
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 24/194 (12%)
Query: 91 FHREEAAGRRMQELKRQFAAIFRQITQHKWA---WPFMHPVDVEGLGLHDYYEVIEKPMD 147
+ ++ +R+Q+ + ++ +++ K A +PF+ PVD + L Y++ +++PMD
Sbjct: 304 YESKKPKSKRLQQAMKFCQSVLKELVAKKHASYNYPFLEPVDPVSMNLPTYFDYVKEPMD 363
Query: 148 FSTIKNKMDGKDGTGYRNVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQ 207
TI K++ Y+ + + DVRLVFKN +N + V++M L E F KW
Sbjct: 364 LGTIAKKLNDWQ---YQTMEDFERDVRLVFKNCYTFNPDGTIVNMMGHRLEEVFNSKWAD 420
Query: 208 LLPKV----MEEEKRQ-------EEEEAKAQLDMQLTQEAVQTNKA-KELRSELNEVDMQ 255
P + +E+ R E E +++ +D E + TN A + L +L + ++
Sbjct: 421 -RPNLDDYDSDEDSRTQGDYDDYESEYSESDID-----ETIITNPAIQYLEEQLARMKVE 474
Query: 256 LENLRETVIQKCRK 269
L+ L++ ++K RK
Sbjct: 475 LQQLKKQELEKIRK 488
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 112 FRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYA 171
+ + + K A PF+ PVD L + Y+ I++PMD STI+ K+ + Y +I
Sbjct: 161 IKAVKRLKDARPFLQPVDTVKLDIPFYFNYIKRPMDLSTIERKL---NVGAYEVPEQITE 217
Query: 172 DVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL----LPKVMEEEKRQEEEEAKAQ 227
D L+ N++K+N + MA+++ FE+ L + P V+ + +R + AQ
Sbjct: 218 DFNLMVNNSIKFNGPNAGISQMARNIQASFEKHMLNMPAKDAPPVIAKGRR-----SSAQ 272
Query: 228 LDMQLTQEAVQTNKAKELRS 247
D + QT+ + R+
Sbjct: 273 EDTPIVIRRAQTHNGRPKRT 292
>gi|145549930|ref|XP_001460644.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428474|emb|CAK93247.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 113 RQITQHKW----AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVRE 168
+++ Q W A F +PVD + G++DYY+++++PMDF T+K K++ Y+N +E
Sbjct: 400 KKVLQILWKAKGAQLFHNPVDEKKYGINDYYDIVKRPMDFGTVKQKLNTNQ---YKNCKE 456
Query: 169 IYADVRLVFKNAMKYNDERDDVHVMAKSLLEKF 201
Y+D+ LVF N + YN +D+ + +L ++F
Sbjct: 457 FYSDILLVFDNCVLYNGSENDIGQIGLALKQEF 489
>gi|397641904|gb|EJK74909.1| hypothetical protein THAOC_03385, partial [Thalassiosira oceanica]
Length = 273
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 123 PFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLVFKNAM 181
PF VD + LGL DY ++I+ PMD T+K K+ +GK Y+++ E DVR ++KN M
Sbjct: 92 PFREAVDWKTLGLFDYPQIIKHPMDLGTVKRKINEGK----YKSLHEAGDDVRQIWKNCM 147
Query: 182 KYNDERDDVHVMAKSLLEKFEEKWLQLL 209
YN + D + +A+S+ +KFE+K+ +LL
Sbjct: 148 TYNADGSDFYNLAESMAKKFEDKFQKLL 175
>gi|347963028|ref|XP_311133.5| AGAP000029-PA [Anopheles gambiae str. PEST]
gi|333467394|gb|EAA06516.6| AGAP000029-PA [Anopheles gambiae str. PEST]
Length = 4121
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 49 DVEQFYLTKDNNQPNTSKSISIAKEKLKDRHVASIEKQ---QQDAFHREEAAGRRMQELK 105
DV F + + +P + K+ + K +LK A I + Q +A ++ + +EL+
Sbjct: 2555 DVTSFKVEVEQGRPGSPKA-KVMKTELK----AGIYPEPTIQTNASDNKKKCSFKPEELR 2609
Query: 106 RQFAAIFRQ-ITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYR 164
+ +TQ + PF PVD LG+ DY++++ +PMD STI+ K++ Y+
Sbjct: 2610 EALLPTLEKLVTQEPESIPFRMPVDPNSLGIPDYFDIVRQPMDLSTIRKKLESGQ---YQ 2666
Query: 165 NVREIYADVRLVFKNAMKYNDERDDVHVMAKSLLEKFE 202
+ RE DV L+F NA YN + V+ L E FE
Sbjct: 2667 DPREYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSEVFE 2704
>gi|389632607|ref|XP_003713956.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
gi|351646289|gb|EHA54149.1| hypothetical protein MGG_08925 [Magnaporthe oryzae 70-15]
Length = 1021
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLV 176
H AW F PVD G YY +I+KPMD T+ K+ +GK YR+ + AD L+
Sbjct: 611 HGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGK----YRSAADFKADFDLM 666
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N +N DVH +A++L F++KW +
Sbjct: 667 LNNCFTFNPAGTDVHALARNLEAYFQDKWAGI 698
>gi|449276532|gb|EMC85004.1| Tyrosine-protein kinase BAZ1B, partial [Columba livia]
Length = 1287
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 62/101 (61%), Gaps = 9/101 (8%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +++++WPF PV E DY+EVI PMDF T+++K + YR+V+E
Sbjct: 1152 ILSKLIKYRFSWPFREPVTTEEA--EDYFEVISNPMDFQTMQSKCSCGN---YRSVQEFL 1206
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
AD++ VF NA +YN ++ HV+ S LEK E+ + ++ K
Sbjct: 1207 ADMKQVFSNAERYN--QNGSHVL--SCLEKTEQCLIDMVHK 1243
>gi|440473196|gb|ELQ42011.1| hypothetical protein OOU_Y34scaffold00240g18 [Magnaporthe oryzae
Y34]
gi|440484338|gb|ELQ64424.1| hypothetical protein OOW_P131scaffold00625g16 [Magnaporthe oryzae
P131]
Length = 1000
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 118 HKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKM-DGKDGTGYRNVREIYADVRLV 176
H AW F PVD G YY +I+KPMD T+ K+ +GK YR+ + AD L+
Sbjct: 590 HGIAWIFAKPVDETRDGAPGYYSIIKKPMDLGTMTVKLQEGK----YRSAADFKADFDLM 645
Query: 177 FKNAMKYNDERDDVHVMAKSLLEKFEEKWLQL 208
N +N DVH +A++L F++KW +
Sbjct: 646 LNNCFTFNPAGTDVHALARNLEAYFQDKWAGI 677
>gi|378755920|gb|EHY65945.1| hypothetical protein NERG_00641 [Nematocida sp. 1 ERTm2]
Length = 364
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 14/134 (10%)
Query: 121 AWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIYADVRLVFKNA 180
A PF++PVD + L + DYYE I++PMD ST+ K+ D Y++ E+ AD+ L+ N
Sbjct: 35 AGPFLYPVDPQRLNIPDYYEKIKEPMDLSTVSKKL---DANVYKSTDELKADINLMLSNC 91
Query: 181 MKYNDERDDVHVMAKSLLEKFEEKWLQLLPKVMEEEKRQEEEEA--KAQLDMQLTQEAVQ 238
YN V M ++L E+ + QLL K KR+ EEEA K ++ +T+E
Sbjct: 92 YTYNQSDTAVCKMGQAL----EKYFKQLLQKGALVRKRKGEEEAEKKRKVKTDMTEEEY- 146
Query: 239 TNKAKELRSELNEV 252
AK L S LNE+
Sbjct: 147 ---AKCLES-LNEI 156
>gi|170295818|ref|NP_035844.2| tyrosine-protein kinase BAZ1B [Mus musculus]
gi|239938603|sp|Q9Z277.2|BAZ1B_MOUSE RecName: Full=Tyrosine-protein kinase BAZ1B; AltName:
Full=Bromodomain adjacent to zinc finger domain protein
1B; AltName: Full=Williams syndrome transcription factor
homolog; AltName: Full=Williams-Beuren syndrome
chromosomal region 9 protein homolog
gi|148687429|gb|EDL19376.1| bromodomain adjacent to zinc finger domain, 1B [Mus musculus]
gi|223461465|gb|AAI41400.1| Bromodomain adjacent to zinc finger domain, 1B [Mus musculus]
Length = 1479
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 9/101 (8%)
Query: 111 IFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNVREIY 170
I ++ +++++WPF PV + DYY+VIE PMDF TI+NK + YR+V+E
Sbjct: 1347 ILHKLVKYRFSWPFREPVTRDEA--EDYYDVIEHPMDFQTIQNKCSCGN---YRSVQEFL 1401
Query: 171 ADVRLVFKNAMKYNDERDDVHVMAKSLLEKFEEKWLQLLPK 211
D++ VF NA YN HV+ S +EK E+ L LL K
Sbjct: 1402 TDMKQVFANAELYNCR--GSHVL--SCMEKTEQCLLALLQK 1438
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 107 QFAAIFRQITQHKWAWPFMHPVDVEGLGLHDYYEVIEKPMDFSTIKNKMDGKDGTGYRNV 166
Q A+ ++ +HK AWPF PVD L L DY+EV+++PMD TI +K+ Y V
Sbjct: 57 QCQALLSRLKRHKHAWPFNQPVDPVALDLPDYWEVVKRPMDLGTIGDKLTSGQ---YAKV 113
Query: 167 REIYADVRLVFKNAMKYNDERDDVHVMAKSLLEK 200
E D+ LV+ N + YN D + A +LL K
Sbjct: 114 SEFLDDLELVWSNCLLYNPPDDPISEWA-TLLRK 146
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.127 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,973,554,623
Number of Sequences: 23463169
Number of extensions: 251517191
Number of successful extensions: 2724165
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6901
Number of HSP's successfully gapped in prelim test: 11226
Number of HSP's that attempted gapping in prelim test: 2244551
Number of HSP's gapped (non-prelim): 334818
length of query: 395
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 251
effective length of database: 8,980,499,031
effective search space: 2254105256781
effective search space used: 2254105256781
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 78 (34.7 bits)