Citrus Sinensis ID: 016108


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-----
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
cHHHHHHHHHHHHHHHHHHHHcccccccEEEcccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccccccccccccccEEEEEEEEEccccEEEEEEEccEEEEEEEEccccEEEEccccccccccccccEEEEccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcc
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEccccccccccccccccccccccHccccccHHcEEEEcccccccccccHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHcccccEEEEccccEEEEEEEEEEEEcccEEEEEEEccEEEEEcccccccEEEEccHHcccHHcccccEEEEEcEEEEcccccccccccccccccEcccccHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEHHHHHHHHcccccHccccccHHHccccccccccccccccccccHHHHHHHHHHHc
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRnhhnnhnhhrrpmlqanqstCALFvgtwvrddtypmyqspecpiidsefncqmngrpdsdylkyrwqplncqlprfnglEFLVKMKGKTVMFVGDSLGLNQWESLICMIHaaaprtrthmtrgdplsTFKFLVSLRLDygisvsfyrapylvdidvvhgkrvlkledisgngkswlNADVLSFNTghwwshegslqgWDYMESMGTYYQDMDRLVALEKGLRTWANWvdnnidrsktrvffqsispthynpsewsagstsstakncygetapmsgttypgaypdqmRVVDAVIRDMHSPAYLLDITMLSElrkdghpsiysgdlnpkqkanpdrsadcshwclpglpdtwnQLLYTALFY
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPThynpsewsagstSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLrnhhnnhnhhrrPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
**VLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNN*******MLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISP******************************TYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSEL*************************DCSHWCLPGLPDTWNQLLYTALF*
MAVLFLKLLGSFLTILCLVLVKPHTVSS*****************************LFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYN***********TAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNP**********DCSHWCLPGLPDTWNQLLYTALFY
MAVLFLKLLGSFLTILCLVLVKPHTVSSA************************STCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAVLFLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query395
255570858405 conserved hypothetical protein [Ricinus 0.954 0.930 0.761 1e-177
225434550392 PREDICTED: uncharacterized protein LOC10 0.962 0.969 0.757 1e-175
224105945394 predicted protein [Populus trichocarpa] 0.969 0.972 0.756 1e-174
449455019390 PREDICTED: uncharacterized protein LOC10 0.956 0.969 0.720 1e-171
356566070388 PREDICTED: uncharacterized protein LOC10 0.926 0.943 0.709 1e-165
356541751388 PREDICTED: uncharacterized protein LOC10 0.924 0.940 0.711 1e-164
356553086359 PREDICTED: uncharacterized protein LOC10 0.893 0.983 0.738 1e-164
224055329339 predicted protein [Populus trichocarpa] 0.855 0.997 0.767 1e-164
449526756345 PREDICTED: uncharacterized LOC101217703 0.868 0.994 0.751 1e-162
357490845401 hypothetical protein MTR_5g071350 [Medic 0.881 0.867 0.697 1e-151
>gi|255570858|ref|XP_002526381.1| conserved hypothetical protein [Ricinus communis] gi|223534292|gb|EEF36005.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score =  625 bits (1613), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 293/385 (76%), Positives = 330/385 (85%), Gaps = 8/385 (2%)

Query: 13  LTILCLVLV-KPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPM 71
           L I CLVL+ +    +SA+IM +RNHH  HN +RRPMLQANQSTCALFVGTWV+DDTYP+
Sbjct: 27  LAIFCLVLLLETQIATSALIMSMRNHHKKHN-NRRPMLQANQSTCALFVGTWVKDDTYPL 85

Query: 72  YQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDS 131
           YQS  CP+ID +FNCQM GRPDSDYLKYRWQPLNC+LPRFNG+EFL+KMKGKTVMFVGDS
Sbjct: 86  YQSSHCPVIDPQFNCQMYGRPDSDYLKYRWQPLNCELPRFNGVEFLLKMKGKTVMFVGDS 145

Query: 132 LGLNQWESLICMIHAAAPRT-RTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDID 190
           LG NQWESLIC+I A  P T  T M+RGDP S FKF     LDYG+S+++Y+APYLVDID
Sbjct: 146 LGRNQWESLICLILATVPSTAATQMSRGDPFSIFKF-----LDYGVSIAYYKAPYLVDID 200

Query: 191 VVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLV 250
           VV GKR+LKLEDISGN  +W +ADVL FNTGHWW+H+GSLQGWDYMES GTYYQDMDRLV
Sbjct: 201 VVQGKRILKLEDISGNANAWRHADVLLFNTGHWWNHQGSLQGWDYMESGGTYYQDMDRLV 260

Query: 251 ALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSG 310
           ALEK LRTWANW+D+NID S T +FFQSISPTHY+P+EWSAG+  +T +NCYGET PMSG
Sbjct: 261 ALEKALRTWANWIDSNIDTSATTLFFQSISPTHYDPNEWSAGAAVTTTRNCYGETTPMSG 320

Query: 311 TTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRS 370
           T  PGAYPDQMRVVD VIR M +P YLLDITMLSELRKD HPSIYSGDL+  Q+ANP RS
Sbjct: 321 TMNPGAYPDQMRVVDNVIRHMQTPTYLLDITMLSELRKDCHPSIYSGDLSADQRANPGRS 380

Query: 371 ADCSHWCLPGLPDTWNQLLYTALFY 395
           ADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 381 ADCSHWCLPGLPDTWNQLFYTALFF 405




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225434550|ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224105945|ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449455019|ref|XP_004145251.1| PREDICTED: uncharacterized protein LOC101208082 [Cucumis sativus] gi|449470704|ref|XP_004153056.1| PREDICTED: uncharacterized protein LOC101217703 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356566070|ref|XP_003551258.1| PREDICTED: uncharacterized protein LOC100818177 [Glycine max] Back     alignment and taxonomy information
>gi|356541751|ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max] Back     alignment and taxonomy information
>gi|356553086|ref|XP_003544889.1| PREDICTED: uncharacterized protein LOC100795193 [Glycine max] Back     alignment and taxonomy information
>gi|224055329|ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449526756|ref|XP_004170379.1| PREDICTED: uncharacterized LOC101217703 [Cucumis sativus] Back     alignment and taxonomy information
>gi|357490845|ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago truncatula] gi|355517045|gb|AES98668.1| hypothetical protein MTR_5g071350 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query395
TAIR|locus:2178813402 PMR5 "AT5G58600" [Arabidopsis 0.972 0.955 0.621 1.1e-137
TAIR|locus:2045688398 TBL45 "AT2G30010" [Arabidopsis 0.858 0.851 0.639 3.4e-125
TAIR|locus:2029959380 TBL38 "AT1G29050" [Arabidopsis 0.939 0.976 0.483 9.7e-96
TAIR|locus:2037498359 TBL42 "TRICHOME BIREFRINGENCE- 0.810 0.891 0.472 1.7e-84
TAIR|locus:2055425385 TBL37 "AT2G34070" [Arabidopsis 0.865 0.888 0.472 2e-81
TAIR|locus:2055878364 AT2G31110 "AT2G31110" [Arabido 0.736 0.799 0.480 3.3e-79
TAIR|locus:2099402356 TBL41 "TRICHOME BIREFRINGENCE- 0.754 0.837 0.490 8.7e-79
TAIR|locus:2041574367 TBL39 "AT2G42570" [Arabidopsis 0.739 0.795 0.481 1.6e-77
TAIR|locus:2170184608 TBR [Arabidopsis thaliana (tax 0.840 0.546 0.401 3.5e-75
TAIR|locus:2155874457 TBL4 "AT5G49340" [Arabidopsis 0.843 0.728 0.410 4.5e-75
TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
 Identities = 251/404 (62%), Positives = 313/404 (77%)

Query:     6 LKLLG-SFLT-ILCLVLVKPHTVSSAVIMGLXXXXXXXX-------XXXXPM--LQANQS 54
             L LLG S ++ I  LVL +P   SSA+I+ L                   P    Q N+S
Sbjct:     5 LPLLGISVVSAIFFLVLQQPEQSSSAIILSLKKRHGSSSGSSGNQYSSSRPSAGFQGNRS 64

Query:    55 TCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNG 113
             TC+LF+GTWVRD++YP+Y+  +CP +++ EF+CQM GRPDSDYLKYRWQP NC LP FNG
Sbjct:    65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNG 124

Query:   114 LEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLD 173
              +FL+KMKGKT+MF GDSLG NQWESLIC+I ++AP TRT MTRG PLSTF+FL     D
Sbjct:   125 AQFLLKMKGKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFL-----D 179

Query:   174 YGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGW 233
             YGI++SFY+AP+LVDID V GKRVLKL++ISGN  +W +AD+L FNTGHWWSH GS+QGW
Sbjct:   180 YGITMSFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGW 239

Query:   234 DYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGS 293
             D ++S  +YYQDMDR VA+EK LRTWA WV+ ++DRS+T+V F SISPTH NPS+W+A S
Sbjct:   240 DLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDWAA-S 298

Query:   294 TSSTAKNCYGETAPMSGTTYP-GAYPDQMR-VVDAVIRDMHSPAYLLDITMLSELRKDGH 351
             +SS +KNCYGET P++GT YP  +Y DQ+R V+  V+  MH+PA+LLDIT+LS LRKDGH
Sbjct:   299 SSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRKDGH 358

Query:   352 PSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 395
             PS+YSG ++  Q++ PD+SADCSHWCLPGLPDTWNQLLYT L Y
Sbjct:   359 PSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402




GO:0003674 "molecular_function" evidence=ND
GO:0005783 "endoplasmic reticulum" evidence=ISS
GO:0009620 "response to fungus" evidence=IMP
GO:0006333 "chromatin assembly or disassembly" evidence=RCA
TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00024075001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query395
PLN02629387 PLN02629, PLN02629, powdery mildew resistance 5 0.0
pfam13839270 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera 1e-108
pfam1441655 pfam14416, PMR5N, PMR5 N terminal Domain 1e-24
>gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 Back     alignment and domain information
 Score =  727 bits (1877), Expect = 0.0
 Identities = 308/392 (78%), Positives = 345/392 (88%), Gaps = 8/392 (2%)

Query: 5   FLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWV 64
            L L   F  +  LVL++P   SSA+I+ L+NHHN+H  +RRP LQANQSTCALFVGTWV
Sbjct: 3   CLLLGSCFSFLFFLVLLQPEIASSALILSLKNHHNHH-SNRRPSLQANQSTCALFVGTWV 61

Query: 65  RDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGK 123
           RDD+YP+YQS +CP +ID EFNCQM GRPDSDYLKYRWQPLNC+LPRFNGLEFL+KMKGK
Sbjct: 62  RDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGK 121

Query: 124 TVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRA 183
           TVMFVGDSLG NQWESLIC+I ++ P TRT M+RGDPLSTFKFL     DYG+S+SFY+A
Sbjct: 122 TVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFL-----DYGVSISFYKA 176

Query: 184 PYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYY 243
           PYLVDID V GKRVLKLE+ISGN  +W +ADVL FNTGHWWSH+GSLQGWDY+ES GTYY
Sbjct: 177 PYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYY 236

Query: 244 QDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYG 303
           QDMDRLVALEK LRTWA WVD N+DRS+TRVFFQSISPTHYNPSEWSAG++++T KNCYG
Sbjct: 237 QDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTT-KNCYG 295

Query: 304 ETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQ 363
           ET PMSG TYPGAYPDQMRVVD VIR MH+PAYLLDIT+LSELRKDGHPSIYSGDL+P Q
Sbjct: 296 ETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQ 355

Query: 364 KANPDRSADCSHWCLPGLPDTWNQLLYTALFY 395
           +ANPDRSADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 356 RANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387


Length = 387

>gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 395
PLN02629387 powdery mildew resistance 5 100.0
PF13839263 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f 100.0
PF1441655 PMR5N: PMR5 N terminal Domain 99.93
cd01842183 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG 98.49
cd01834191 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG 94.85
cd01829200 SGNH_hydrolase_peri2 SGNH_peri2; putative periplas 92.41
COG2845354 Uncharacterized protein conserved in bacteria [Fun 89.98
cd01827188 sialate_O-acetylesterase_like1 sialate O-acetylest 81.38
>PLN02629 powdery mildew resistance 5 Back     alignment and domain information
Probab=100.00  E-value=1.1e-122  Score=925.06  Aligned_cols=378  Identities=81%  Similarity=1.434  Sum_probs=345.9

Q ss_pred             HHHHHHHhhhcccccccceeeeeecCCCCCCCCCCCCcccCCCCCCCCccCceeeCCCCCCCCCCCCC-CCCCCCccccC
Q 016108           11 SFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMN   89 (395)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~n   89 (395)
                      .|-++..++|+++..+++++++++...+..|.+ +.|.++.+.+.||+|+|+||+|+++|+|++++|| ||++++||++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~kn   87 (387)
T PLN02629          9 CFSFLFFLVLLQPEIASSALILSLKNHHNHHSN-RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMY   87 (387)
T ss_pred             HHHHHHHHhhhccchhhhhhhhhhhcccccccC-CCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhc
Confidence            344445778888988999999998887765555 6777888999999999999999999999999999 99999999999


Q ss_pred             CCCCCcccccccccCCCCCCCCChHHHHHHHcCCeEEEEeecchHHHHHHHHHHhhhcCCCCceeeeeCCCeeeEEEeee
Q 016108           90 GRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVS  169 (395)
Q Consensus        90 GRpD~~yl~wrWqP~~C~LprFd~~~fl~~lrgK~i~FVGDSl~Rnq~eSLlClL~~~~~~~~~~~~~~~~~~~~~f~~~  169 (395)
                      ||||++|++|||||++|+||||||.+||++|||||||||||||+|||||||+|||++++|+.++.+.+.++..+|+|+  
T Consensus        88 GRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~--  165 (387)
T PLN02629         88 GRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFL--  165 (387)
T ss_pred             CCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEec--
Confidence            999999999999999999999999999999999999999999999999999999999998766666667777888888  


Q ss_pred             eccccceEEEEEecccccccccccceeeEEEcccCccccCCCCccEEEEecccccccCCcccceeeeccCceeeecCcHH
Q 016108          170 LRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRL  249 (395)
Q Consensus       170 ~~~~~n~tV~f~wspfLv~~~~~~~~~~l~lD~id~~~~~w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~  249 (395)
                         +||+||+||||||||+.+.....+.|+||+|++.++.|.++|||||||||||.+.+.+++++|++.|..++++|++.
T Consensus       166 ---~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~  242 (387)
T PLN02629        166 ---DYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRL  242 (387)
T ss_pred             ---cCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHH
Confidence               99999999999999998877777899999999888899999999999999999999899999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHH
Q 016108          250 VALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIR  329 (395)
Q Consensus       250 ~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~  329 (395)
                      +||++||+||++||++++++.+++|||||+||+||+||+||+|.+ ..+|+|+++|+|+.++++.+.....+++++++++
T Consensus       243 ~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~-~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~  321 (387)
T PLN02629        243 VALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAS-TTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIR  321 (387)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCC-CCCCCCccCCccCcCccccCcchHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998422 2357899999999988877666677889999999


Q ss_pred             hcCCCeeEeecccccccccCCCCCCcCCCCCccccCCCCCCCCcccccCCCchhHHHHHHHHHhhC
Q 016108          330 DMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY  395 (395)
Q Consensus       330 ~~~~~v~lLDIt~ls~~R~DgHps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~~  395 (395)
                      +++.+|++||||+||++|||||||+|+++++++++++|..++||+||||||||||||||||++|++
T Consensus       322 ~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~  387 (387)
T PLN02629        322 GMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF  387 (387)
T ss_pred             hcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence            999999999999999999999999998777778888888889999999999999999999999975



>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p Back     alignment and domain information
>PF14416 PMR5N: PMR5 N terminal Domain Back     alignment and domain information
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily Back     alignment and domain information
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases Back     alignment and domain information
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query395
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.1 bits (142), Expect = 2e-09
 Identities = 59/447 (13%), Positives = 126/447 (28%), Gaps = 156/447 (34%)

Query: 36  NHHNNH--------NHHRRPMLQANQSTCALFVGTW----VRDDTYPMYQSPECPIIDSE 83
           +HH++H         +  + +L   +     FV  +    V+D    +    E   I   
Sbjct: 1   HHHHHHMDFETGEHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSKEEIDHIIMS 57

Query: 84  FNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTV--MFVGDSLGLN-QWESL 140
                    D+     R             L + +  K + +   FV + L +N ++  L
Sbjct: 58  --------KDAVSGTLR-------------LFWTLLSKQEEMVQKFVEEVLRINYKF--L 94

Query: 141 ICMIHAA--APRTRT--------------------HMTRGDPLSTFK-FLVSLRLDYGIS 177
           +  I      P   T                    +++R  P    +  L+ LR      
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR------ 148

Query: 178 VSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLS-------FNTGHWWSHEGSL 230
                A  ++    + G          G+GK+W+  DV          +   +W +  + 
Sbjct: 149 ----PAKNVL----IDGV--------LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 231 QGWD-YMESMGTYYQDMD---------------RLVALEKGLRT---------------- 258
              +  +E +      +D               R+ +++  LR                 
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 259 -WANWVDNNID-RSKTRV---------FFQSISPTHYNPSEWSAGSTSSTAKNCYGETAP 307
                  N  +   K  +         F  + + TH +    S   T    K+   +   
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 308 MSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANP 367
                 P   P ++           +P     +++++E  +D   + +    +  +  N 
Sbjct: 313 CR----PQDLPREVLTT--------NP---RRLSIIAESIRD-GLATW----DNWKHVNC 352

Query: 368 DRSADCSHWCLPGLPDTWNQLLYTALF 394
           D+        L  L     + ++  L 
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLS 379


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query395
4h08_A200 Putative hydrolase; GDSL-like lipase/acylhydrolase 96.64
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=96.64  E-value=0.0014  Score=58.00  Aligned_cols=92  Identities=11%  Similarity=0.100  Sum_probs=56.3

Q ss_pred             CCccEEEEecccccccCCcccceeeeccCceeeecCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCC
Q 016108          211 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS  290 (395)
Q Consensus       211 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~  290 (395)
                      ..+|+||++.|..=..                    ...+.|+..|+++++-+.+.  .+++++++.+..|.....  +.
T Consensus        73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~~  128 (200)
T 4h08_A           73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--GM  128 (200)
T ss_dssp             SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--GG
T ss_pred             CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--cc
Confidence            4679999999975211                    12467888899888877653  246789999998865431  00


Q ss_pred             CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeecccccc
Q 016108          291 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE  345 (395)
Q Consensus       291 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~  345 (395)
                      .         ..        ..........+++++++.++  ..+.++|+.....
T Consensus       129 ~---------~~--------~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~  164 (200)
T 4h08_A          129 K---------EF--------APITERLNVRNQIALKHINR--ASIEVNDLWKVVI  164 (200)
T ss_dssp             C---------EE--------CTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred             c---------cc--------chhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence            0         00        00000012346677777666  5799999876553




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query395
d3dc7a1207 Uncharacterized protein Lp3323 {Lactobacillus plan 96.81
d2o14a2208 Hypothetical protein YxiM {Bacillus subtilis [TaxI 96.65
d3bzwa1248 Uncharacterized protein BT2961 {Bacteroides thetai 84.04
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: BT2961-like
domain: Uncharacterized protein Lp3323
species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.81  E-value=0.00086  Score=56.66  Aligned_cols=106  Identities=10%  Similarity=-0.032  Sum_probs=50.8

Q ss_pred             CCccEEEEecccccccCCcccceeeeccCceeeecCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCC
Q 016108          211 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS  290 (395)
Q Consensus       211 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~  290 (395)
                      ..+|+||+..|.-=.....  +...+.       . ...+.|+.+++.+++.+.+..  +++++++-+.-|.....    
T Consensus        64 ~~~d~Vii~~G~ND~~~~~--~~~~~~-------~-~~~~~~~~~~~~~i~~i~~~~--~~~~ii~~~~~~~~~~~----  127 (207)
T d3dc7a1          64 EDADFIAVFGGVNDYGRDQ--PLGQYG-------D-CDMTTFYGALMMLLTGLQTNW--PTVPKLFISAIHIGSDF----  127 (207)
T ss_dssp             TTCSEEEEECCHHHHHTTC--CCCCTT-------C-CSTTSHHHHHHHHHHHHHHHC--TTSCEEEEECCCCCSCS----
T ss_pred             CCCCEEEEccCchhhhccc--Cccccc-------c-ccHHHHHHHHHHHHHHHHHhC--CceEEEEecCCCCcccc----
Confidence            3579999998854211100  000000       0 112345666666666665532  35667777665544321    


Q ss_pred             CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeeccccccc
Q 016108          291 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSEL  346 (395)
Q Consensus       291 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~  346 (395)
                             +...     +.............++.++++.++  ..+.++|+...+..
T Consensus       128 -------~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~~  169 (207)
T d3dc7a1         128 -------GGSF-----SAVTNGLGYRQSDYEAAIAQMTAD--YGVPHLSLYRDAGM  169 (207)
T ss_dssp             -------BTTB-----CSSCCTTSCCHHHHHHHHHHHHHH--HTCCEEEHHHHSSC
T ss_pred             -------ccch-----hhhhhhHHHHHHHHHHHHHHHHHh--ceeeeeehhhhhhc
Confidence                   1111     111111111112345666666665  47888998765543



>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure