Citrus Sinensis ID: 016108
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 395 | ||||||
| 255570858 | 405 | conserved hypothetical protein [Ricinus | 0.954 | 0.930 | 0.761 | 1e-177 | |
| 225434550 | 392 | PREDICTED: uncharacterized protein LOC10 | 0.962 | 0.969 | 0.757 | 1e-175 | |
| 224105945 | 394 | predicted protein [Populus trichocarpa] | 0.969 | 0.972 | 0.756 | 1e-174 | |
| 449455019 | 390 | PREDICTED: uncharacterized protein LOC10 | 0.956 | 0.969 | 0.720 | 1e-171 | |
| 356566070 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.926 | 0.943 | 0.709 | 1e-165 | |
| 356541751 | 388 | PREDICTED: uncharacterized protein LOC10 | 0.924 | 0.940 | 0.711 | 1e-164 | |
| 356553086 | 359 | PREDICTED: uncharacterized protein LOC10 | 0.893 | 0.983 | 0.738 | 1e-164 | |
| 224055329 | 339 | predicted protein [Populus trichocarpa] | 0.855 | 0.997 | 0.767 | 1e-164 | |
| 449526756 | 345 | PREDICTED: uncharacterized LOC101217703 | 0.868 | 0.994 | 0.751 | 1e-162 | |
| 357490845 | 401 | hypothetical protein MTR_5g071350 [Medic | 0.881 | 0.867 | 0.697 | 1e-151 |
| >gi|255570858|ref|XP_002526381.1| conserved hypothetical protein [Ricinus communis] gi|223534292|gb|EEF36005.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 625 bits (1613), Expect = e-177, Method: Compositional matrix adjust.
Identities = 293/385 (76%), Positives = 330/385 (85%), Gaps = 8/385 (2%)
Query: 13 LTILCLVLV-KPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPM 71
L I CLVL+ + +SA+IM +RNHH HN +RRPMLQANQSTCALFVGTWV+DDTYP+
Sbjct: 27 LAIFCLVLLLETQIATSALIMSMRNHHKKHN-NRRPMLQANQSTCALFVGTWVKDDTYPL 85
Query: 72 YQSPECPIIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDS 131
YQS CP+ID +FNCQM GRPDSDYLKYRWQPLNC+LPRFNG+EFL+KMKGKTVMFVGDS
Sbjct: 86 YQSSHCPVIDPQFNCQMYGRPDSDYLKYRWQPLNCELPRFNGVEFLLKMKGKTVMFVGDS 145
Query: 132 LGLNQWESLICMIHAAAPRT-RTHMTRGDPLSTFKFLVSLRLDYGISVSFYRAPYLVDID 190
LG NQWESLIC+I A P T T M+RGDP S FKF LDYG+S+++Y+APYLVDID
Sbjct: 146 LGRNQWESLICLILATVPSTAATQMSRGDPFSIFKF-----LDYGVSIAYYKAPYLVDID 200
Query: 191 VVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLV 250
VV GKR+LKLEDISGN +W +ADVL FNTGHWW+H+GSLQGWDYMES GTYYQDMDRLV
Sbjct: 201 VVQGKRILKLEDISGNANAWRHADVLLFNTGHWWNHQGSLQGWDYMESGGTYYQDMDRLV 260
Query: 251 ALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSG 310
ALEK LRTWANW+D+NID S T +FFQSISPTHY+P+EWSAG+ +T +NCYGET PMSG
Sbjct: 261 ALEKALRTWANWIDSNIDTSATTLFFQSISPTHYDPNEWSAGAAVTTTRNCYGETTPMSG 320
Query: 311 TTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRS 370
T PGAYPDQMRVVD VIR M +P YLLDITMLSELRKD HPSIYSGDL+ Q+ANP RS
Sbjct: 321 TMNPGAYPDQMRVVDNVIRHMQTPTYLLDITMLSELRKDCHPSIYSGDLSADQRANPGRS 380
Query: 371 ADCSHWCLPGLPDTWNQLLYTALFY 395
ADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 381 ADCSHWCLPGLPDTWNQLFYTALFF 405
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434550|ref|XP_002277229.1| PREDICTED: uncharacterized protein LOC100263882 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224105945|ref|XP_002313988.1| predicted protein [Populus trichocarpa] gi|222850396|gb|EEE87943.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449455019|ref|XP_004145251.1| PREDICTED: uncharacterized protein LOC101208082 [Cucumis sativus] gi|449470704|ref|XP_004153056.1| PREDICTED: uncharacterized protein LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356566070|ref|XP_003551258.1| PREDICTED: uncharacterized protein LOC100818177 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541751|ref|XP_003539337.1| PREDICTED: uncharacterized protein LOC100813612 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356553086|ref|XP_003544889.1| PREDICTED: uncharacterized protein LOC100795193 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|224055329|ref|XP_002298483.1| predicted protein [Populus trichocarpa] gi|222845741|gb|EEE83288.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449526756|ref|XP_004170379.1| PREDICTED: uncharacterized LOC101217703 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357490845|ref|XP_003615710.1| hypothetical protein MTR_5g071350 [Medicago truncatula] gi|355517045|gb|AES98668.1| hypothetical protein MTR_5g071350 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 395 | ||||||
| TAIR|locus:2178813 | 402 | PMR5 "AT5G58600" [Arabidopsis | 0.972 | 0.955 | 0.621 | 1.1e-137 | |
| TAIR|locus:2045688 | 398 | TBL45 "AT2G30010" [Arabidopsis | 0.858 | 0.851 | 0.639 | 3.4e-125 | |
| TAIR|locus:2029959 | 380 | TBL38 "AT1G29050" [Arabidopsis | 0.939 | 0.976 | 0.483 | 9.7e-96 | |
| TAIR|locus:2037498 | 359 | TBL42 "TRICHOME BIREFRINGENCE- | 0.810 | 0.891 | 0.472 | 1.7e-84 | |
| TAIR|locus:2055425 | 385 | TBL37 "AT2G34070" [Arabidopsis | 0.865 | 0.888 | 0.472 | 2e-81 | |
| TAIR|locus:2055878 | 364 | AT2G31110 "AT2G31110" [Arabido | 0.736 | 0.799 | 0.480 | 3.3e-79 | |
| TAIR|locus:2099402 | 356 | TBL41 "TRICHOME BIREFRINGENCE- | 0.754 | 0.837 | 0.490 | 8.7e-79 | |
| TAIR|locus:2041574 | 367 | TBL39 "AT2G42570" [Arabidopsis | 0.739 | 0.795 | 0.481 | 1.6e-77 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.840 | 0.546 | 0.401 | 3.5e-75 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.843 | 0.728 | 0.410 | 4.5e-75 |
| TAIR|locus:2178813 PMR5 "AT5G58600" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 251/404 (62%), Positives = 313/404 (77%)
Query: 6 LKLLG-SFLT-ILCLVLVKPHTVSSAVIMGLXXXXXXXX-------XXXXPM--LQANQS 54
L LLG S ++ I LVL +P SSA+I+ L P Q N+S
Sbjct: 5 LPLLGISVVSAIFFLVLQQPEQSSSAIILSLKKRHGSSSGSSGNQYSSSRPSAGFQGNRS 64
Query: 55 TCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNG 113
TC+LF+GTWVRD++YP+Y+ +CP +++ EF+CQM GRPDSDYLKYRWQP NC LP FNG
Sbjct: 65 TCSLFLGTWVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNG 124
Query: 114 LEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLD 173
+FL+KMKGKT+MF GDSLG NQWESLIC+I ++AP TRT MTRG PLSTF+FL D
Sbjct: 125 AQFLLKMKGKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFL-----D 179
Query: 174 YGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGW 233
YGI++SFY+AP+LVDID V GKRVLKL++ISGN +W +AD+L FNTGHWWSH GS+QGW
Sbjct: 180 YGITMSFYKAPFLVDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGW 239
Query: 234 DYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGS 293
D ++S +YYQDMDR VA+EK LRTWA WV+ ++DRS+T+V F SISPTH NPS+W+A S
Sbjct: 240 DLIQSGNSYYQDMDRFVAMEKALRTWAYWVETHVDRSRTQVLFLSISPTHDNPSDWAA-S 298
Query: 294 TSSTAKNCYGETAPMSGTTYP-GAYPDQMR-VVDAVIRDMHSPAYLLDITMLSELRKDGH 351
+SS +KNCYGET P++GT YP +Y DQ+R V+ V+ MH+PA+LLDIT+LS LRKDGH
Sbjct: 299 SSSGSKNCYGETEPITGTAYPVSSYTDQLRSVIVEVLHGMHNPAFLLDITLLSSLRKDGH 358
Query: 352 PSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 395
PS+YSG ++ Q++ PD+SADCSHWCLPGLPDTWNQLLYT L Y
Sbjct: 359 PSVYSGLISGSQRSRPDQSADCSHWCLPGLPDTWNQLLYTLLIY 402
|
|
| TAIR|locus:2045688 TBL45 "AT2G30010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2029959 TBL38 "AT1G29050" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2037498 TBL42 "TRICHOME BIREFRINGENCE-LIKE 42" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055425 TBL37 "AT2G34070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2055878 AT2G31110 "AT2G31110" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2099402 TBL41 "TRICHOME BIREFRINGENCE-LIKE 41" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2041574 TBL39 "AT2G42570" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00024075001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (392 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 395 | |||
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 0.0 | |
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 1e-108 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 1e-24 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
Score = 727 bits (1877), Expect = 0.0
Identities = 308/392 (78%), Positives = 345/392 (88%), Gaps = 8/392 (2%)
Query: 5 FLKLLGSFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWV 64
L L F + LVL++P SSA+I+ L+NHHN+H +RRP LQANQSTCALFVGTWV
Sbjct: 3 CLLLGSCFSFLFFLVLLQPEIASSALILSLKNHHNHH-SNRRPSLQANQSTCALFVGTWV 61
Query: 65 RDDTYPMYQSPECP-IIDSEFNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGK 123
RDD+YP+YQS +CP +ID EFNCQM GRPDSDYLKYRWQPLNC+LPRFNGLEFL+KMKGK
Sbjct: 62 RDDSYPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGK 121
Query: 124 TVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVSLRLDYGISVSFYRA 183
TVMFVGDSLG NQWESLIC+I ++ P TRT M+RGDPLSTFKFL DYG+S+SFY+A
Sbjct: 122 TVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFL-----DYGVSISFYKA 176
Query: 184 PYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYY 243
PYLVDID V GKRVLKLE+ISGN +W +ADVL FNTGHWWSH+GSLQGWDY+ES GTYY
Sbjct: 177 PYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYY 236
Query: 244 QDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYG 303
QDMDRLVALEK LRTWA WVD N+DRS+TRVFFQSISPTHYNPSEWSAG++++T KNCYG
Sbjct: 237 QDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGASTTT-KNCYG 295
Query: 304 ETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQ 363
ET PMSG TYPGAYPDQMRVVD VIR MH+PAYLLDIT+LSELRKDGHPSIYSGDL+P Q
Sbjct: 296 ETTPMSGMTYPGAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQ 355
Query: 364 KANPDRSADCSHWCLPGLPDTWNQLLYTALFY 395
+ANPDRSADCSHWCLPGLPDTWNQL YTALF+
Sbjct: 356 RANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387
|
Length = 387 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 395 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.93 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 98.49 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 94.85 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 92.41 | |
| COG2845 | 354 | Uncharacterized protein conserved in bacteria [Fun | 89.98 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 81.38 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-122 Score=925.06 Aligned_cols=378 Identities=81% Similarity=1.434 Sum_probs=345.9
Q ss_pred HHHHHHHhhhcccccccceeeeeecCCCCCCCCCCCCcccCCCCCCCCccCceeeCCCCCCCCCCCCC-CCCCCCccccC
Q 016108 11 SFLTILCLVLVKPHTVSSAVIMGLRNHHNNHNHHRRPMLQANQSTCALFVGTWVRDDTYPMYQSPECP-IIDSEFNCQMN 89 (395)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Cd~~~G~WV~d~~~plY~~~~Cp-~i~~~~~C~~n 89 (395)
.|-++..++|+++..+++++++++...+..|.+ +.|.++.+.+.||+|+|+||+|+++|+|++++|| ||++++||++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~CD~f~G~WV~D~s~PlY~~~~Cp~fi~~~~nC~kn 87 (387)
T PLN02629 9 CFSFLFFLVLLQPEIASSALILSLKNHHNHHSN-RRPSLQANQSTCALFVGTWVRDDSYPLYQSSDCPGVIDPEFNCQMY 87 (387)
T ss_pred HHHHHHHHhhhccchhhhhhhhhhhcccccccC-CCCCCCCCccccCCCCCeEecCCCCCCCCCCCCccccccccchhhc
Confidence 344445778888988999999998887765555 6777888999999999999999999999999999 99999999999
Q ss_pred CCCCCcccccccccCCCCCCCCChHHHHHHHcCCeEEEEeecchHHHHHHHHHHhhhcCCCCceeeeeCCCeeeEEEeee
Q 016108 90 GRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTVMFVGDSLGLNQWESLICMIHAAAPRTRTHMTRGDPLSTFKFLVS 169 (395)
Q Consensus 90 GRpD~~yl~wrWqP~~C~LprFd~~~fl~~lrgK~i~FVGDSl~Rnq~eSLlClL~~~~~~~~~~~~~~~~~~~~~f~~~ 169 (395)
||||++|++|||||++|+||||||.+||++|||||||||||||+|||||||+|||++++|+.++.+.+.++..+|+|+
T Consensus 88 GRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGDSL~RNQ~eSLvClL~~~~p~~~~~~~~~~~~~~~~F~-- 165 (387)
T PLN02629 88 GRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGDSLGRNQWESLICLISSSVPSTRTQMSRGDPLSTFKFL-- 165 (387)
T ss_pred CCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEeccccchhHHHHHHHHhhccCCCCceeeecCCceEEEEec--
Confidence 999999999999999999999999999999999999999999999999999999999998766666667777888888
Q ss_pred eccccceEEEEEecccccccccccceeeEEEcccCccccCCCCccEEEEecccccccCCcccceeeeccCceeeecCcHH
Q 016108 170 LRLDYGISVSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRL 249 (395)
Q Consensus 170 ~~~~~n~tV~f~wspfLv~~~~~~~~~~l~lD~id~~~~~w~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~ 249 (395)
+||+||+||||||||+.+.....+.|+||+|++.++.|.++|||||||||||.+.+.+++++|++.|..++++|++.
T Consensus 166 ---~yN~TV~~ywspfLV~~~~~~~~~~l~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (387)
T PLN02629 166 ---DYGVSISFYKAPYLVDIDAVQGKRVLKLEEISGNANAWRDADVLIFNTGHWWSHQGSLQGWDYIESGGTYYQDMDRL 242 (387)
T ss_pred ---cCCEEEEEEecceEEeeecCCCceeEEecCcchhhhhhccCCEEEEeCccccCCCCeeEEeeeeccCCccccCccHH
Confidence 99999999999999998877777899999999888899999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHH
Q 016108 250 VALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWSAGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIR 329 (395)
Q Consensus 250 ~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~ 329 (395)
+||++||+||++||++++++.+++|||||+||+||+||+||+|.+ ..+|+|+++|+|+.++++.+.....+++++++++
T Consensus 243 ~A~r~al~T~~~wv~~~~~~~kt~vffrT~SP~Hfe~g~Wn~gg~-~~~~~C~~et~P~~~~~~~~~~~~~~~~ve~v~~ 321 (387)
T PLN02629 243 VALEKALRTWAYWVDTNVDRSRTRVFFQSISPTHYNPSEWSAGAS-TTTKNCYGETTPMSGMTYPGAYPDQMRVVDEVIR 321 (387)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEecCcccccCCCcCCCCC-CCCCCCccCCccCcCccccCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998422 2357899999999988877666677889999999
Q ss_pred hcCCCeeEeecccccccccCCCCCCcCCCCCccccCCCCCCCCcccccCCCchhHHHHHHHHHhhC
Q 016108 330 DMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANPDRSADCSHWCLPGLPDTWNQLLYTALFY 395 (395)
Q Consensus 330 ~~~~~v~lLDIt~ls~~R~DgHps~y~~~~~~~~~~~~~~~~DC~HWCLPGv~DtWNelL~~~L~~ 395 (395)
+++.+|++||||+||++|||||||+|+++++++++++|..++||+||||||||||||||||++|++
T Consensus 322 ~~~~~v~lLDIT~ls~lR~DgHPs~Y~~~~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~~ 387 (387)
T PLN02629 322 GMHNPAYLLDITLLSELRKDGHPSIYSGDLSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALFF 387 (387)
T ss_pred hcCCceEEEechhhhhcCCCCCcccccCCCchhhccCCCCCCCcccccCCCCCccHHHHHHHHHhC
Confidence 999999999999999999999999998777778888888889999999999999999999999975
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG2845 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 395 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 2e-09
Identities = 59/447 (13%), Positives = 126/447 (28%), Gaps = 156/447 (34%)
Query: 36 NHHNNH--------NHHRRPMLQANQSTCALFVGTW----VRDDTYPMYQSPECPIIDSE 83
+HH++H + + +L + FV + V+D + E I
Sbjct: 1 HHHHHHMDFETGEHQYQYKDILSVFEDA---FVDNFDCKDVQDMPKSILSKEEIDHIIMS 57
Query: 84 FNCQMNGRPDSDYLKYRWQPLNCQLPRFNGLEFLVKMKGKTV--MFVGDSLGLN-QWESL 140
D+ R L + + K + + FV + L +N ++ L
Sbjct: 58 --------KDAVSGTLR-------------LFWTLLSKQEEMVQKFVEEVLRINYKF--L 94
Query: 141 ICMIHAA--APRTRT--------------------HMTRGDPLSTFK-FLVSLRLDYGIS 177
+ I P T +++R P + L+ LR
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELR------ 148
Query: 178 VSFYRAPYLVDIDVVHGKRVLKLEDISGNGKSWLNADVLS-------FNTGHWWSHEGSL 230
A ++ + G G+GK+W+ DV + +W + +
Sbjct: 149 ----PAKNVL----IDGV--------LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 231 QGWD-YMESMGTYYQDMD---------------RLVALEKGLRT---------------- 258
+ +E + +D R+ +++ LR
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252
Query: 259 -WANWVDNNID-RSKTRV---------FFQSISPTHYNPSEWSAGSTSSTAKNCYGETAP 307
N + K + F + + TH + S T K+ +
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312
Query: 308 MSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSELRKDGHPSIYSGDLNPKQKANP 367
P P ++ +P +++++E +D + + + + N
Sbjct: 313 CR----PQDLPREVLTT--------NP---RRLSIIAESIRD-GLATW----DNWKHVNC 352
Query: 368 DRSADCSHWCLPGLPDTWNQLLYTALF 394
D+ L L + ++ L
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLS 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 395 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 96.64 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0014 Score=58.00 Aligned_cols=92 Identities=11% Similarity=0.100 Sum_probs=56.3
Q ss_pred CCccEEEEecccccccCCcccceeeeccCceeeecCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCC
Q 016108 211 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 290 (395)
Q Consensus 211 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~ 290 (395)
..+|+||++.|..=.. ...+.|+..|+++++-+.+. .+++++++.+..|..... +.
T Consensus 73 ~~pd~Vvi~~G~ND~~--------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~~~--~~ 128 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFD--------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRTGE--GM 128 (200)
T ss_dssp SCCSEEEECCCSSCTT--------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEESG--GG
T ss_pred CCCCeEEEEeeeCCCC--------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcccc--cc
Confidence 4679999999975211 12467888899888877653 246789999998865431 00
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeecccccc
Q 016108 291 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSE 345 (395)
Q Consensus 291 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~ 345 (395)
. .. ..........+++++++.++ ..+.++|+.....
T Consensus 129 ~---------~~--------~~~~~~~~~~n~~~~~~a~~--~~v~~iD~~~~~~ 164 (200)
T 4h08_A 129 K---------EF--------APITERLNVRNQIALKHINR--ASIEVNDLWKVVI 164 (200)
T ss_dssp C---------EE--------CTHHHHHHHHHHHHHHHHHH--TTCEEECHHHHHT
T ss_pred c---------cc--------chhHHHHHHHHHHHHHHhhh--cceEEEecHHhHh
Confidence 0 00 00000012346677777666 5799999876553
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 395 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 96.81 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 96.65 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 84.04 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.81 E-value=0.00086 Score=56.66 Aligned_cols=106 Identities=10% Similarity=-0.032 Sum_probs=50.8
Q ss_pred CCccEEEEecccccccCCcccceeeeccCceeeecCcHHHHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCCCCC
Q 016108 211 LNADVLSFNTGHWWSHEGSLQGWDYMESMGTYYQDMDRLVALEKGLRTWANWVDNNIDRSKTRVFFQSISPTHYNPSEWS 290 (395)
Q Consensus 211 ~~~DvlV~ntG~Ww~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~wv~~~~~~~~~~VffRt~sP~Hf~~g~W~ 290 (395)
..+|+||+..|.-=..... +...+. . ...+.|+.+++.+++.+.+.. +++++++-+.-|.....
T Consensus 64 ~~~d~Vii~~G~ND~~~~~--~~~~~~-------~-~~~~~~~~~~~~~i~~i~~~~--~~~~ii~~~~~~~~~~~---- 127 (207)
T d3dc7a1 64 EDADFIAVFGGVNDYGRDQ--PLGQYG-------D-CDMTTFYGALMMLLTGLQTNW--PTVPKLFISAIHIGSDF---- 127 (207)
T ss_dssp TTCSEEEEECCHHHHHTTC--CCCCTT-------C-CSTTSHHHHHHHHHHHHHHHC--TTSCEEEEECCCCCSCS----
T ss_pred CCCCEEEEccCchhhhccc--Cccccc-------c-ccHHHHHHHHHHHHHHHHHhC--CceEEEEecCCCCcccc----
Confidence 3579999998854211100 000000 0 112345666666666665532 35667777665544321
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCchHHHHHHHHHHhcCCCeeEeeccccccc
Q 016108 291 AGSTSSTAKNCYGETAPMSGTTYPGAYPDQMRVVDAVIRDMHSPAYLLDITMLSEL 346 (395)
Q Consensus 291 ~~~~~~~gg~C~~~t~P~~~~~~~~~~~~~~~~v~~v~~~~~~~v~lLDIt~ls~~ 346 (395)
+... +.............++.++++.++ ..+.++|+...+..
T Consensus 128 -------~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~--~~~~~id~~~~~~~ 169 (207)
T d3dc7a1 128 -------GGSF-----SAVTNGLGYRQSDYEAAIAQMTAD--YGVPHLSLYRDAGM 169 (207)
T ss_dssp -------BTTB-----CSSCCTTSCCHHHHHHHHHHHHHH--HTCCEEEHHHHSSC
T ss_pred -------ccch-----hhhhhhHHHHHHHHHHHHHHHHHh--ceeeeeehhhhhhc
Confidence 1111 111111111112345666666665 47888998765543
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|