Query 016109
Match_columns 395
No_of_seqs 161 out of 714
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 08:02:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016109.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016109hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 1E-156 4E-161 1158.0 34.2 352 42-395 24-379 (379)
2 2qap_A Fructose-1,6-bisphospha 100.0 8E-153 3E-157 1136.4 34.9 354 41-395 34-391 (391)
3 2pc4_A 41 kDa antigen, fructos 100.0 7E-153 2E-157 1131.1 34.2 354 42-395 12-369 (369)
4 3mbd_A Fructose-bisphosphate a 100.0 6E-152 2E-156 1113.4 31.1 333 43-377 5-340 (342)
5 3mmt_A Fructose-bisphosphate a 100.0 1E-150 4E-155 1106.3 31.2 333 48-381 5-344 (347)
6 3bv4_A Fructose-bisphosphate a 100.0 4E-149 1E-153 1096.6 34.5 332 45-376 5-340 (341)
7 2iqt_A Fructose-bisphosphate a 100.0 5E-105 2E-109 771.5 19.5 272 54-362 6-292 (296)
8 3iv3_A Tagatose 1,6-diphosphat 97.7 0.0015 5.1E-08 64.7 16.9 257 57-348 15-293 (332)
9 1to3_A Putative aldolase YIHT; 89.8 11 0.00038 36.2 15.8 245 58-345 10-264 (304)
10 1w8s_A FBP aldolase, fructose- 86.1 18 0.00063 33.7 14.5 169 141-363 76-250 (263)
11 2xw6_A MGS, methylglyoxal synt 46.7 34 0.0012 29.5 5.9 83 46-138 12-106 (134)
12 2yvq_A Carbamoyl-phosphate syn 43.3 37 0.0013 28.8 5.5 88 33-130 21-118 (143)
13 3b8i_A PA4872 oxaloacetate dec 33.2 42 0.0014 32.3 4.7 137 49-229 67-213 (287)
14 1b93_A Protein (methylglyoxal 32.6 40 0.0014 29.7 4.1 84 45-138 19-114 (152)
15 1vmd_A MGS, methylglyoxal synt 31.9 58 0.002 29.6 5.1 85 44-138 34-130 (178)
16 1vcv_A Probable deoxyribose-ph 30.6 2.8E+02 0.0096 25.5 9.7 159 142-337 51-224 (226)
17 3nw0_B Melanoma-associated ant 30.6 93 0.0032 28.7 6.4 117 192-323 2-130 (217)
18 3fok_A Uncharacterized protein 29.5 4.1E+02 0.014 26.0 12.8 144 175-361 139-292 (307)
19 1r88_A MPT51/MPB51 antigen; AL 23.5 1.1E+02 0.0037 27.3 5.4 54 198-255 224-277 (280)
20 2fiq_A Putative tagatose 6-pho 22.9 75 0.0026 32.3 4.6 160 163-343 103-297 (420)
21 4do4_A Alpha-N-acetylgalactosa 21.5 1E+02 0.0034 29.6 5.0 56 127-186 86-141 (400)
22 3bil_A Probable LACI-family tr 21.4 4.7E+02 0.016 23.9 13.8 164 107-295 121-311 (348)
23 3h2s_A Putative NADH-flavin re 21.1 3E+02 0.01 23.0 7.5 67 240-311 134-217 (224)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=1.1e-156 Score=1158.03 Aligned_cols=352 Identities=54% Similarity=0.855 Sum_probs=332.6
Q ss_pred cccccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCCCCCceEEEeeccccccc
Q 016109 42 PIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQ 121 (395)
Q Consensus 42 ~~~~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~~~~~IsGvILfeETl~Q 121 (395)
..+..++++||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||
T Consensus 24 ~~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLftsp~~~~~IsGvILFeETl~Q 103 (379)
T 3kx6_A 24 VKLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTTKGLGKYISGCILFEETLFQ 103 (379)
T ss_dssp SSCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHTC
T ss_pred hhcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcCcccccceeEEEcchhhccc
Confidence 45568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc-CC--CcCHHHH
Q 016109 122 STTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PC--GPSALAV 198 (395)
Q Consensus 122 ~~~dG~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i-~~--~Ps~~aI 198 (395)
+++||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| ++ +||..+|
T Consensus 104 k~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~aI 183 (379)
T 3kx6_A 104 QAPNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLSI 183 (379)
T ss_dssp BCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHHH
T ss_pred cccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 45 7999999
Q ss_pred HHHHhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCC
Q 016109 199 KEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKA 278 (395)
Q Consensus 199 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~ 278 (395)
.+|++.|||||+|||++||||||||||||||||||+||++|||+||++||++|++|||||||||||||||+||++|+.|+
T Consensus 184 ~ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k~ 263 (379)
T 3kx6_A 184 LETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDKP 263 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCCC
T ss_pred HHHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcC-CCCceeEEeehhhhhhhHHhhhcCCcccHHHHH
Q 016109 279 SPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA-PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQ 357 (395)
Q Consensus 279 s~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~-~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ 357 (395)
|++|||++||++|+|||||+||||+|||||||+||||.||||||+. ++||.||||||||||+++|++|.||+||+++||
T Consensus 264 s~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsFSyGRALQ~s~LkaW~Gk~eNv~aaQ 343 (379)
T 3kx6_A 264 APQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCNKHPWSLSFSYGRALQSSVLKTWNGSMSNAAAAQ 343 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhhcCCCCcceeeechhhhchHHHHHHhcCchhHHHHH
Confidence 9999999999999999999999999999999999999999999994 689999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhcCccccCCCcccccccccccCccC
Q 016109 358 KSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 395 (395)
Q Consensus 358 ~~l~~ra~~n~~A~~G~y~~~~~~~~~~~sl~~~~~~y 395 (395)
++|++|||+||+|++|||.++++ ++++||||+||+|
T Consensus 344 ~~l~~Ra~~Ns~A~~Gky~~~~~--~a~~sl~v~~~~y 379 (379)
T 3kx6_A 344 DVLMKLAQQNSEASLGSLKTDLS--DDGESLFEAKYIY 379 (379)
T ss_dssp HHHHHHHHHHHHHTTTCCC----------------CCC
T ss_pred HHHHHHHHhhhHHhcCCcCCCcc--cccccccccCccC
Confidence 99999999999999999998876 6689999999998
No 2
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=7.5e-153 Score=1136.40 Aligned_cols=354 Identities=48% Similarity=0.820 Sum_probs=333.0
Q ss_pred ccccccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCCCCCceEEEeecccccc
Q 016109 41 VPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLY 120 (395)
Q Consensus 41 ~~~~~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~~~~~IsGvILfeETl~ 120 (395)
++.+..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++|||||||||||||
T Consensus 34 ~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILFeETl~ 113 (391)
T 2qap_A 34 YNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEAEGFEQYISGVILHDETVG 113 (391)
T ss_dssp GCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECHHHHT
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecCCCccCceEEEEcchHhcc
Confidence 44456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcchHHHHhhCCCcceeecCCCcccCC-CCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc-CCCcCHHHH
Q 016109 121 QSTTDGKKFVDCLREEKIVPGIKVDKGLVPLP-GSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAV 198 (395)
Q Consensus 121 Q~~~dG~~~~~~L~~kGIvpGIKVDkGl~pl~-g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i-~~~Ps~~aI 198 (395)
|+++||+||+|+|+++|||||||||||++||+ |+++|++|||||||++||++||++|||||||||||+| +++||..+|
T Consensus 114 Qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~PS~~aI 193 (391)
T 2qap_A 114 QKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTVSESAV 193 (391)
T ss_dssp CBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBCCHHHH
T ss_pred CcCcCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCCCHHHH
Confidence 99999999999999999999999999999999 8899999999999999999999999999999999999 688999999
Q ss_pred HHHHhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCC
Q 016109 199 KEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKA 278 (395)
Q Consensus 199 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~ 278 (395)
.+|++.|||||+|||++||||||||||||||||||++|++|||+||++||++|++|+|||||||||||||+||++|+.|+
T Consensus 194 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~~~~k~ 273 (391)
T 2qap_A 194 RFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAESGKTA 273 (391)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTTSSCCC
T ss_pred HHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcC--CCCceeEEeehhhhhhhHHhhhcCCcccHHHH
Q 016109 279 SPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAA 356 (395)
Q Consensus 279 s~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~--~~PW~LsFSfgRALq~~~l~~W~Gk~env~aA 356 (395)
|++|||++||++|+|||||+||||+|||||||+||||.||||||+. .+||+||||||||||+++|++|.||+||+++|
T Consensus 274 s~eevA~~Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRALq~s~LkaW~Gk~eNv~aa 353 (391)
T 2qap_A 274 APEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARALQSSALKAWGGKESGLAAG 353 (391)
T ss_dssp CHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHHHHHHHHHHTTSGGGHHHH
T ss_pred CHHHHHHHHHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHHhHHHHHHhcCCchhHHHH
Confidence 9999999999999999999999999999999999999999999984 47999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhcCccccCCCcccccccccccCccC
Q 016109 357 QKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 395 (395)
Q Consensus 357 Q~~l~~ra~~n~~A~~G~y~~~~~~~~~~~sl~~~~~~y 395 (395)
|++|++|||+|++|++|+|.++.+ .++++||||+||+|
T Consensus 354 Q~~l~~Ra~~Ns~A~~Gky~~~~~-~~~~~sl~v~~~~y 391 (391)
T 2qap_A 354 RRAFLHRARMNSMAQLGKYKRSDD-DASSSSLYVKGNTY 391 (391)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGC-C-------------
T ss_pred HHHHHHHHHhchHhhCcccCCCCC-ccccCceeeccccC
Confidence 999999999999999999987765 35678999999998
No 3
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=7e-153 Score=1131.12 Aligned_cols=354 Identities=55% Similarity=0.866 Sum_probs=338.4
Q ss_pred cccccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCCCCCceEEEeeccccccc
Q 016109 42 PIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQ 121 (395)
Q Consensus 42 ~~~~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~~~~~IsGvILfeETl~Q 121 (395)
+.+..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||
T Consensus 12 ~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~tsp~~~~~IsGvILfeETl~q 91 (369)
T 2pc4_A 12 KKLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGTKGLGKFISGAILFEETLFQ 91 (369)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTCTTTEEEEEECHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccCCCcccceEEEEcchHhccC
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc-C--CCcCHHHH
Q 016109 122 STTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-P--CGPSALAV 198 (395)
Q Consensus 122 ~~~dG~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i-~--~~Ps~~aI 198 (395)
+++||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| + ++||..+|
T Consensus 92 k~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~~PS~~aI 171 (369)
T 2pc4_A 92 KNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAKGKPTDLSI 171 (369)
T ss_dssp BCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGGTBSCHHHH
T ss_pred cCcCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCCCCCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 5 78999999
Q ss_pred HHHHhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCC
Q 016109 199 KEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKA 278 (395)
Q Consensus 199 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~ 278 (395)
.+|++.|||||+|||++||||||||||||||||||++|++|||+||+++|++|++|||||||||||||||+||++|+.|+
T Consensus 172 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~G~~~~~k~ 251 (369)
T 2pc4_A 172 HETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTAGYECTAKT 251 (369)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCC
T ss_pred HHHHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhc-CCCCceeEEeehhhhhhhHHhhhcCCcccHHHHH
Q 016109 279 SPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQ 357 (395)
Q Consensus 279 s~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~-~~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ 357 (395)
|++|||++||++|+|||||+||||+|||||||+||||.||||||+ .++||+||||||||||+++|++|.||+||+++||
T Consensus 252 s~e~vA~~Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~~~PW~lsFSygRALq~~~lk~W~Gk~env~aaQ 331 (369)
T 2pc4_A 252 TTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALGPHPWALTFSYGRALQASVLNTWQGKKENVAKAR 331 (369)
T ss_dssp CHHHHHHHHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTCCCSSEEEEEESHHHHHHHHHTTTTCTTTHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCCCCCceeEEehHHhhhhHHHHHhCCChHHHHHHH
Confidence 999999999999999999999999999999999999999999998 4579999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhhcCccccCCCcccccccccccCccC
Q 016109 358 KSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVKGYTY 395 (395)
Q Consensus 358 ~~l~~ra~~n~~A~~G~y~~~~~~~~~~~sl~~~~~~y 395 (395)
++|++|||+||+|++|+|.++....++++||||+||+|
T Consensus 332 ~~l~~ra~~n~~A~~G~y~~~~~~~~~~~sl~v~~~~y 369 (369)
T 2pc4_A 332 EVLLQRAEANSLATYGKYKGGAGGENAGASLYEKKYVY 369 (369)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCC-----CCCCCCC---
T ss_pred HHHHHHHHhhhHHhcCcccCCCCccccccceeeccccC
Confidence 99999999999999999987664345688999999998
No 4
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=6.4e-152 Score=1113.43 Aligned_cols=333 Identities=40% Similarity=0.617 Sum_probs=326.8
Q ss_pred ccccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCCCCCceEEEeecccccccc
Q 016109 43 IRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQS 122 (395)
Q Consensus 43 ~~~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~~~~~IsGvILfeETl~Q~ 122 (395)
+|..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||++++||||||||||||||+
T Consensus 5 ~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~tsp~~~~~IsGvILfeETl~qk 84 (342)
T 3mbd_A 5 MMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQT 84 (342)
T ss_dssp -CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCTTGGGTEEEEEECGGGGGCB
T ss_pred cCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcCcccccceeEEEcchhhcccc
Confidence 45578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc-CCCcCHHHHHHH
Q 016109 123 TTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEA 201 (395)
Q Consensus 123 ~~dG~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i-~~~Ps~~aI~~n 201 (395)
++||+||+|+|+++|||||||||||++|| +++|++|||||||++||++||++|||||||||||+| +++||..+|.+|
T Consensus 85 ~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~en 162 (342)
T 3mbd_A 85 SGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINEN 162 (342)
T ss_dssp CTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHHHH
T ss_pred ccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHHHH
Confidence 99999999999999999999999999999 889999999999999999999999999999999999 688999999999
Q ss_pred HhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChH
Q 016109 202 AWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPE 281 (395)
Q Consensus 202 a~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~ 281 (395)
++.|||||+|||++||||||||||||||||||+||++|||+||++||++|++|||||||||||||||+||++|+.|+|++
T Consensus 163 a~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s~e 242 (342)
T 3mbd_A 163 CSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPK 242 (342)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCCHH
T ss_pred HHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcC--CCCceeEEeehhhhhhhHHhhhcCCcccHHHHHHH
Q 016109 282 TIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKS 359 (395)
Q Consensus 282 evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~--~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ~~ 359 (395)
|||++||++|+|||||+||||+|||||||+||||.||||||+. .+||.||||||||||+++|++|.||+||+++||++
T Consensus 243 eVA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~~ 322 (342)
T 3mbd_A 243 KVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKI 322 (342)
T ss_dssp HHHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEecchhhhhHHHHHhcCCcccHHHHHHH
Confidence 9999999999999999999999999999999999999999984 47999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhcCcccc
Q 016109 360 LLVRAKANSLAQLGKYSA 377 (395)
Q Consensus 360 l~~ra~~n~~A~~G~y~~ 377 (395)
|++|||+||+|++|||+.
T Consensus 323 l~~Ra~~N~~A~~Gky~~ 340 (342)
T 3mbd_A 323 LLETSFKACRGAEGKLWD 340 (342)
T ss_dssp HHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHhhHHhCCCCcC
Confidence 999999999999999974
No 5
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=1.1e-150 Score=1106.26 Aligned_cols=333 Identities=50% Similarity=0.793 Sum_probs=326.8
Q ss_pred hHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhccc-CCCCCceEEEeeccccccccccCC
Q 016109 48 YTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTT-PGLGDYISGAILFEETLYQSTTDG 126 (395)
Q Consensus 48 ~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~tt-p~~~~~IsGvILfeETl~Q~~~dG 126 (395)
+.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||+||||| |++++||||||||||||||+++||
T Consensus 5 ~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~dG 84 (347)
T 3mmt_A 5 MNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKASTG 84 (347)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTTS
T ss_pred HHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcCC
Confidence 3489999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred cchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc--CCCcCHHHHHHHHhH
Q 016109 127 KKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI--PCGPSALAVKEAAWG 204 (395)
Q Consensus 127 ~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i--~~~Ps~~aI~~na~~ 204 (395)
+||+|+|+++|||||||||||++||+|+++|++|||||||.+||++||++|||||||||||+| +++||..+|.+|++.
T Consensus 85 ~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~~ 164 (347)
T 3mmt_A 85 QMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQA 164 (347)
T ss_dssp SBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHHH
T ss_pred CCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999 578999999999999
Q ss_pred HHHHHHHHHhCCcceeecccccCCC---CCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChH
Q 016109 205 LARYAAISQDNGLVPIVEPEILLDG---DHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPE 281 (395)
Q Consensus 205 LArYA~icQ~~GLVPIVEPEVl~dg---dh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~ 281 (395)
|||||+|||++|||||||||||||| ||||++|++|||+||++||++|++|||||||||||||||+||++ +.|+|++
T Consensus 165 LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~-~~k~s~e 243 (347)
T 3mmt_A 165 LARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKD-ARIASVE 243 (347)
T ss_dssp HHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTT-SCCCCHH
T ss_pred HHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCC-CCcCCHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999999999 8999999
Q ss_pred HHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhc-CCCCceeEEeehhhhhhhHHhhhcCCcccHHHHHHHH
Q 016109 282 TIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSL 360 (395)
Q Consensus 282 evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~-~~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ~~l 360 (395)
|||++||++|+||||++||||+|||||||+||||.||||||+ .++||.||||||||||+++|++|.||+||+++||++|
T Consensus 244 evA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~PW~LsFSygRALQ~s~LkaW~Gk~env~aaQ~~~ 323 (347)
T 3mmt_A 244 EVAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNALGALPWKLTFSYGRALQAAALKAWAGKNENIVVAQKAF 323 (347)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTSCCCSSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCeeeEeccchhhhHHHHHHhCCChhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999 5789999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCccccCCCc
Q 016109 361 LVRAKANSLAQLGKYSAEGES 381 (395)
Q Consensus 361 ~~ra~~n~~A~~G~y~~~~~~ 381 (395)
++|||+||+|++|+|.++++.
T Consensus 324 ~~Ra~~N~~A~~G~y~~~~e~ 344 (347)
T 3mmt_A 324 CHRARMNHLAALGQWTKDQEK 344 (347)
T ss_dssp HHHHHHHHHHHTTCCCGGGC-
T ss_pred HHHHHHhHHHHcCCcCccccc
Confidence 999999999999999988764
No 6
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=3.6e-149 Score=1096.61 Aligned_cols=332 Identities=55% Similarity=0.828 Sum_probs=327.0
Q ss_pred ccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCC-CCCceEEEeeccccccccc
Q 016109 45 AGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPG-LGDYISGAILFEETLYQST 123 (395)
Q Consensus 45 ~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~-~~~~IsGvILfeETl~Q~~ 123 (395)
..++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||+||||||+ +++||||||||||||||++
T Consensus 5 ~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~qk~ 84 (341)
T 3bv4_A 5 TPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLYQKA 84 (341)
T ss_dssp CHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHTCBC
T ss_pred CHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhccccC
Confidence 467899999999999999999999999999999999999999999999999999999998 9999999999999999999
Q ss_pred cCCcchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeecc-CCCcCHHHHHHHH
Q 016109 124 TDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSI-PCGPSALAVKEAA 202 (395)
Q Consensus 124 ~dG~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i-~~~Ps~~aI~~na 202 (395)
+||+||+|+|+++|||||||||||++||+|+++|++|||||||++||++||++|||||||||||+| +++||..+|.+|+
T Consensus 85 ~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~~na 164 (341)
T 3bv4_A 85 DDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENA 164 (341)
T ss_dssp TTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHHHHH
T ss_pred cCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 6889999999999
Q ss_pred hHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChHH
Q 016109 203 WGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPET 282 (395)
Q Consensus 203 ~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~e 282 (395)
+.|||||+|||++||||||||||||||||||++|++|||+||+++|++|++|+|||||||||||||+||++|+.+++++|
T Consensus 165 ~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~~e~ 244 (341)
T 3bv4_A 165 NVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEE 244 (341)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCCHHH
T ss_pred HHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcC--CCCceeEEeehhhhhhhHHhhhcCCcccHHHHHHHH
Q 016109 283 IAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSL 360 (395)
Q Consensus 283 vA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~--~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ~~l 360 (395)
||++|+++|+|||||+||||+|||||||+||||.||||||+. .+||.||||||||||+++|++|.||+||+++||++|
T Consensus 245 va~~Tv~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRALq~~~lk~W~Gk~env~aaQ~~l 324 (341)
T 3bv4_A 245 IAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEY 324 (341)
T ss_dssp HHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHHhHHHHHHhCCChhhHHHHHHHH
Confidence 999999999999999999999999999999999999999984 359999999999999999999999999999999999
Q ss_pred HHHHHhcchhhcCccc
Q 016109 361 LVRAKANSLAQLGKYS 376 (395)
Q Consensus 361 ~~ra~~n~~A~~G~y~ 376 (395)
++|||+||+|++|+|.
T Consensus 325 ~~ra~~n~~A~~G~y~ 340 (341)
T 3bv4_A 325 VKRALANSLACQGKYT 340 (341)
T ss_dssp HHHHHHHHHHTTTCCC
T ss_pred HHHHHhhhHHhcCcCC
Confidence 9999999999999995
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.9e-105 Score=771.49 Aligned_cols=272 Identities=25% Similarity=0.324 Sum_probs=248.1
Q ss_pred HHHHHhhCCCCceEee-ccCCcchHHHhhhcCCCCchhh--------hHhhhhhhcccCCC-CCceEEEeeccccccccc
Q 016109 54 KTAKTIASPGRGILAI-DESNATCGKRLASIGLDNTETN--------RQAYRQLLLTTPGL-GDYISGAILFEETLYQST 123 (395)
Q Consensus 54 ~~A~~i~a~gKGILAa-DES~gt~~Krl~~iGienteen--------rr~yRelL~ttp~~-~~~IsGvILfeETl~Q~~ 123 (395)
....+.++|||||||+ |||+|||+|||++||||||||| ||+||+||||||++ ++||||||||||||||+.
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~ 85 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI 85 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC
Confidence 3445678999999965 9999999999999999999999 69999999999996 999999999999999985
Q ss_pred cCCcchHHHH-hhCCCcceeecCCCcccCC-CCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeeccCCCcCHHHHHHH
Q 016109 124 TDGKKFVDCL-REEKIVPGIKVDKGLVPLP-GSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEA 201 (395)
Q Consensus 124 ~dG~~~~~~L-~~kGIvpGIKVDkGl~pl~-g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~n 201 (395)
||+||+++| +++|||||||||||++||+ |.++|++|||||||++||++|+++| |||||||+|.+ ..+|.+|
T Consensus 86 -dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~G---AKWR~Vlki~~---~~aI~~n 158 (296)
T 2iqt_A 86 -EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFG---TKMRSVIKQAN---EQGIRDI 158 (296)
T ss_dssp -TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCE---EEEEEEECSCC---HHHHHHH
T ss_pred -CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCC---CeeeeeeecCc---hhHHHHH
Confidence 999999999 7999999999999999999 7799999999999999999996655 99999999964 8999999
Q ss_pred HhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChH
Q 016109 202 AWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPE 281 (395)
Q Consensus 202 a~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~ 281 (395)
++.|||||+|||++||||||||||||||+ |+++|++|||+||+++|++|++ ||||||+| ||++| +++
T Consensus 159 a~~laryA~icq~~GLVPIVEPEVl~dg~-d~~~c~~vte~vL~~v~~aL~~-~V~Legtl-------pg~~~----~~~ 225 (296)
T 2iqt_A 159 VEQQFQWGKEILSHGLVPILEPEVDIHCP-EKAKAEEILKRELLAQLDKMTE-PVMLKITI-------PTVDN----FYK 225 (296)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHHCSS-CEEEEEEC-------CSSTT----TTH
T ss_pred HHHHHHHHHHHHHcCccceecceECCCCC-CHHHHHHHHHHHHHHHHHHHhh-CcEEeccc-------CCCCC----CHH
Confidence 99999999999999999999999999999 9999999999999999999999 99998887 99998 567
Q ss_pred HHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcCCCCceeEEeehhhhhhhHHhhhcCCcc---cHHHHHH
Q 016109 282 TIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKTWQGRPE---NTEAAQK 358 (395)
Q Consensus 282 evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~~~PW~LsFSfgRALq~~~l~~W~Gk~e---nv~aAQ~ 358 (395)
+||+ ||+||||||||||||+||||.|||+||. ||||||||||+++ ..|..+.| .+..+-+
T Consensus 226 ~va~----------ppaVpgVvfLSGGqSeeeAt~~L~a~n~------l~fSfgRALq~~l-~~~q~d~ef~~~l~~~i~ 288 (296)
T 2iqt_A 226 EIIE----------HPMMLRVVALSGGYSREQANELLSRNHG------VIASFSRALVEGL-SARQTDAEFNAMLEASIE 288 (296)
T ss_dssp HHHT----------STTEEEEEEECTTCCHHHHHHHHTTSTT------CEEEESHHHHTTC-CTTSCHHHHHHHHHHHHH
T ss_pred hhcC----------CCCCCeeeeCCCCCCHHHHHHHHHhcCC------cEEEeHHHhhChh-hhccCHHHHHHHHHHHHH
Confidence 8775 9999999999999999999999999883 8999999999996 66777654 2444444
Q ss_pred HHHH
Q 016109 359 SLLV 362 (395)
Q Consensus 359 ~l~~ 362 (395)
.+++
T Consensus 289 ~iy~ 292 (296)
T 2iqt_A 289 DVYQ 292 (296)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 8
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=97.66 E-value=0.0015 Score=64.68 Aligned_cols=257 Identities=16% Similarity=0.114 Sum_probs=149.1
Q ss_pred HHhh-CCCCc-eEeeccCCcchHHHhhhcCCCC-chhhhHhhhhhhcccCCCCCceEEEeeccccccccccCCcchHHHH
Q 016109 57 KTIA-SPGRG-ILAIDESNATCGKRLASIGLDN-TETNRQAYRQLLLTTPGLGDYISGAILFEETLYQSTTDGKKFVDCL 133 (395)
Q Consensus 57 ~~i~-a~gKG-ILAaDES~gt~~Krl~~iGien-teenrr~yRelL~ttp~~~~~IsGvILfeETl~Q~~~dG~~~~~~L 133 (395)
++|. ..|+- |+|.|+.. ++.+-++..|-.. +.+.-..+++++... +..+.+||+|.+ ++.+.. ....
T Consensus 15 ~ri~~~~g~~~ilA~DHR~-sl~~m~~~~~~~~~~~~~l~~~K~lv~~~--~~~~asaILlD~-~~G~~a------~~~~ 84 (332)
T 3iv3_A 15 AKVSDSNGVISALAFDQRG-ALKCLMAQYQMKEPTVAQMEELKVLVSEE--LTPYASSILLDP-EYGLPA------AQAR 84 (332)
T ss_dssp HHTSCTTSCEEEEEECCSH-HHHHHHHTTTTSCCCHHHHHHHHHHHHHH--HGGGSSEEEECT-TTCHHH------HHTS
T ss_pred HHHhCCCCCEEEEEcCChh-HHHHHHHhcCCCCCChHHHHHHHHHHHHH--HhcCCcEEEEch-hhCHHH------hccc
Confidence 3454 34444 99999974 6777787776442 445567777777532 344567755544 443322 1112
Q ss_pred -hhCCCcceeecCCCcccCCCCC----CCCCCCCchHHHHHHHHHHHCCCCcceeeeeeccCCCcCHHHHHHHHhHHHHH
Q 016109 134 -REEKIVPGIKVDKGLVPLPGSN----NESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARY 208 (395)
Q Consensus 134 -~~kGIvpGIKVDkGl~pl~g~~----~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LArY 208 (395)
.+.|.+.++ ++ +|.. +..+..=++.=.++++ ++||..-|--.-+..++.+... .+|...|.|.
T Consensus 85 ~~~~GLii~~--E~-----~G~~~~~~gr~p~~l~~~sve~a~---~~GADAVk~lv~~g~d~~~e~~--~~q~~~l~rv 152 (332)
T 3iv3_A 85 DREAGLLLAY--EK-----TGYDANTTSRLPDCLVDWSIKRLK---EAGADAVKFLLYYDVDGDPQVN--VQKQAYIERI 152 (332)
T ss_dssp CTTCEEEEEC--BC-----CCCCTTSSCCCCCBCTTCCHHHHH---HTTCSEEEEEEEECTTSCHHHH--HHHHHHHHHH
T ss_pred cCCCcEEEEe--cc-----CCCCcCCCCCCCccccccCHHHHH---HcCCCEEEEEEEcCCCchHHHH--HHHHHHHHHH
Confidence 566777655 22 1110 1011111233355555 4699998876655544333222 3567789999
Q ss_pred HHHHHhCCcceeecccccC---CCCCchhHHHHHHHHHHHHHHHHH--HhCCccccccccccccCCCCCC--------CC
Q 016109 209 AAISQDNGLVPIVEPEILL---DGDHPIERTLEVAEKVWSEVFFYL--AENNVVLEGILLKPSMVTPGAE--------HK 275 (395)
Q Consensus 209 A~icQ~~GLVPIVEPEVl~---dgdh~i~~~~~vte~vL~~v~~aL--~~~~V~LeG~lLKpnMV~pG~~--------~~ 275 (395)
+.-|++.|+-=++||=... .+++|.+.. ++...++....+.+ .+.|+++ +|..+ ||.- +.
T Consensus 153 ~~ec~~~GiPlllEil~y~~~~~~~~~~~~a-~~~p~~V~~a~R~~~~~elGaDv----~Kve~--p~~~~~v~g~~~~~ 225 (332)
T 3iv3_A 153 GSECQAEDIPFFLEILTYDETISNNSSVEFA-KVKVHKVNDAMKVFSAERFGIDV----LKVEV--PVNMVYVEGFAEGE 225 (332)
T ss_dssp HHHHHHHTCCEEEEEEECBTTBSCTTSHHHH-TTHHHHHHHHHHHHTSGGGCCSE----EEECC--SSCGGGBTTTCSSC
T ss_pred HHHHHHcCCceEEEEeccCCCCCCCcchhhh-ccCHHHHHHHHHHHhhcCcCCcE----EEEec--CCChhhhccccccc
Confidence 9999999996677763322 356776532 33344555566777 3457765 89776 4421 22
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCceeeecCCCCChHHHHHHH-hhhhcCCCCceeEEeehhhhhhhHHhhhcC
Q 016109 276 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNL-NAMNQAPNPWHVSFSYARALQNTVLKTWQG 348 (395)
Q Consensus 276 ~k~s~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqSeeeAt~~L-nAiN~~~~PW~LsFSfgRALq~~~l~~W~G 348 (395)
..+|-+|.+..--++... ..|| ++|||||-|.++--.-| .||-.+. + --.++.||++=++.++.+..
T Consensus 226 ~~y~~~ea~~~f~~~~~a---~~~P-~v~lsgG~~~~~fl~~v~~A~~aGa-~-f~Gv~~GRnvwq~~v~~~~~ 293 (332)
T 3iv3_A 226 VVYSKEEAAQAFREQEAS---TDLP-YIYLSAGVSAELFQETLVFAHKAGA-K-FNGVLCGRATWAGSVQVYME 293 (332)
T ss_dssp CCBCHHHHHHHHHHHHHT---CSSC-EEEECTTCCHHHHHHHHHHHHHHTC-C-CCEEEECHHHHTTHHHHHHH
T ss_pred ccccHHHHHHHHHHHHhc---CCCC-EEEECCCCCHHHHHHHHHHHHHcCC-C-cceEEeeHHHHHhhhhhhcc
Confidence 345666665544444432 2333 67999999988777777 3444321 1 14789999998887777643
No 9
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.79 E-value=11 Score=36.21 Aligned_cols=245 Identities=16% Similarity=0.189 Sum_probs=122.8
Q ss_pred Hhh-CCCCc-eEeeccCCcchHHHhhhcCCCCc--hhhhHhhhhhhcccCCCCCceEEEeecccccccc-ccCCcchHHH
Q 016109 58 TIA-SPGRG-ILAIDESNATCGKRLASIGLDNT--ETNRQAYRQLLLTTPGLGDYISGAILFEETLYQS-TTDGKKFVDC 132 (395)
Q Consensus 58 ~i~-a~gKG-ILAaDES~gt~~Krl~~iGient--eenrr~yRelL~ttp~~~~~IsGvILfeETl~Q~-~~dG~~~~~~ 132 (395)
+|. ..|+- |+|.|+ .+++-+-|...|-... .+.-..+..++.. .+..+.+|+++..+-.... ...+ .+
T Consensus 10 ri~~~~G~~~ilA~Dh-r~~l~~~~~~~g~~~~~~~~~l~~~k~lv~~--~~~~~~~avl~~~g~~~~a~~~~~----~~ 82 (304)
T 1to3_A 10 DITRASGGFAMLAVDQ-REAMRLMFAAAGAKTPVADSVLTDFKVNAAK--ILSPYASAVLLDQQFCYRQAVEQN----AV 82 (304)
T ss_dssp GGSCTTSCEEEEECCC-CHHHHHHHHHTTCCSSCCHHHHHHHHHHHHH--HHGGGCSEEEECTTTTHHHHHHTT----CS
T ss_pred HHhCCCCCEEEEEccC-hhHHHHHHHhcCCCCCcccchhhhHHHHHHH--HHhcCCCEEEeCHHHHHHHhhccc----cc
Confidence 344 34554 999999 7777788887774222 1122333333321 1233477766655533210 0000 01
Q ss_pred HhhCCCcceeecCCCcccCCCCCCCCCCCCchH-HH---HHHHHHHHCCCCcceeeeeeccCCCcCHHHHHHHHhHHHHH
Q 016109 133 LREEKIVPGIKVDKGLVPLPGSNNESWCQGLDG-LA---SRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARY 208 (395)
Q Consensus 133 L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDg-L~---eR~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LArY 208 (395)
-.+.|++ ||++.. .|+. .+. .++ |. .-..+-.++||..-|--..+. .+.|. .++-..+.+.
T Consensus 83 ~~~~gli--l~l~~~-~~l~---~~~----~~~~l~~~~~~ve~a~~~GAdaV~vlv~~~-~d~~~----~~~~~~i~~v 147 (304)
T 1to3_A 83 AKSCAMI--VAADDF-IPGN---GIP----VDNVVLDKKINAQAVKRDGAKALKLLVLWR-SDEDA----QQRLNMVKEF 147 (304)
T ss_dssp CTTSEEE--EECEEE-EEET---TEE----EEEEEECSSCCHHHHHHTTCCEEEEEEEEC-TTSCH----HHHHHHHHHH
T ss_pred CCCCcEE--EEECCC-CCCC---CCc----cchhhccCchhHHHHHHcCCCEEEEEEEcC-CCccH----HHHHHHHHHH
Confidence 1223333 344431 1221 010 011 22 223334457998888433333 22333 4566677788
Q ss_pred HHHHHhCCcceeecccccCCCCCchh-HHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChHHHHHHH
Q 016109 209 AAISQDNGLVPIVEPEILLDGDHPIE-RTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYT 287 (395)
Q Consensus 209 A~icQ~~GLVPIVEPEVl~dgdh~i~-~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~evA~~T 287 (395)
...|.+.|+-=||| +..+|.|--+ ... ...+....+...+.|++ ++|....+-|.. ++++.....
T Consensus 148 ~~~~~~~G~p~lv~--~~~~g~~v~~~~~~---~~~v~~aa~~a~~lGaD----~iKv~~~~~~~g-----~~~~~~~vv 213 (304)
T 1to3_A 148 NELCHSNGLLSIIE--PVVRPPRCGDKFDR---EQAIIDAAKELGDSGAD----LYKVEMPLYGKG-----ARSDLLTAS 213 (304)
T ss_dssp HHHHHTTTCEEEEE--EEECCCSSCSCCCH---HHHHHHHHHHHTTSSCS----EEEECCGGGGCS-----CHHHHHHHH
T ss_pred HHHHHHcCCcEEEE--EECCCCccccCCCh---hHHHHHHHHHHHHcCCC----EEEeCCCcCCCC-----CHHHHHHHH
Confidence 88999999977888 4455543100 000 01223334444556776 478665322211 444444333
Q ss_pred HHHhhccCCCCCceeeecCCCCChHHHHHHHhhhhcCCCCceeEEeehhhhhhhHHhh
Q 016109 288 LTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTVLKT 345 (395)
Q Consensus 288 v~~l~rtvP~aVpgVvFLSGGqSeeeAt~~LnAiN~~~~PW~LsFSfgRALq~~~l~~ 345 (395)
- .+... ..+| .++++||-++++.-.++...-.. ..-.|..||++-++.++.
T Consensus 214 ~-~~~~~--~~~P-~Vv~aGG~~~~~~~~~~~~a~~a---Ga~Gv~vGRaI~q~~~~~ 264 (304)
T 1to3_A 214 Q-RLNGH--INMP-WVILSSGVDEKLFPRAVRVAMEA---GASGFLAGRAVWSSVIGL 264 (304)
T ss_dssp H-HHHHT--CCSC-EEECCTTSCTTTHHHHHHHHHHT---TCCEEEESHHHHGGGTTC
T ss_pred H-hcccc--CCCC-eEEEecCCCHHHHHHHHHHHHHc---CCeEEEEehHHhCccccC
Confidence 2 22211 1233 46889999887766666544331 367899999998876643
No 10
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=86.14 E-value=18 Score=33.71 Aligned_cols=169 Identities=15% Similarity=0.111 Sum_probs=93.4
Q ss_pred eeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeeccCCCcCHHHHHHHHhHHHHHHHHHHhCCccee
Q 016109 141 GIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPI 220 (395)
Q Consensus 141 GIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI~~na~~LArYA~icQ~~GLVPI 220 (395)
-+|++.+. .++|. .++.-+- ..+.+..+.||..=++|--++. .....+.+.. ++....|.+.|+.=|
T Consensus 76 iv~~~~~~-~~~g~---~~~~~~~---~~ve~Ai~~Ga~~v~~~~nig~---~~~~~~~~~~---~~v~~~~~~~~~~vI 142 (263)
T 1w8s_A 76 ILKLNGKT-TLYNG---EPVSVAN---CSVEEAVSLGASAVGYTIYPGS---GFEWKMFEEL---ARIKRDAVKFDLPLV 142 (263)
T ss_dssp EEECEECC-TTCCS---SCCCEES---SCHHHHHHTTCSEEEEEECTTS---TTHHHHHHHH---HHHHHHHHHHTCCEE
T ss_pred EEEEeCCC-CcCCC---CccchHH---HHHHHHHHCCCCEEEEEEecCC---cCHHHHHHHH---HHHHHHHHHcCCeEE
Confidence 37877666 23332 1333232 2333444579999888755552 3344444444 455578999887557
Q ss_pred ecccccCCCCCchh--HHHHHHHHHHHHHHHHHHhCCccccccccccccCCCCCCCCCCCChHHHHHHHHHHhhccCCCC
Q 016109 221 VEPEILLDGDHPIE--RTLEVAEKVWSEVFFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPA 298 (395)
Q Consensus 221 VEPEVl~dgdh~i~--~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~evA~~Tv~~l~rtvP~a 298 (395)
+| ...+|.|--+ ...++ ....+.-.+.|++. +|-+. || +++. ++.+++.+ +.
T Consensus 143 i~--~~~~G~~~~~~~s~~~i-----~~a~~~a~~~GAD~----vkt~~--~~-------~~e~-----~~~~~~~~-~~ 196 (263)
T 1w8s_A 143 VE--SFPRGGKVVNETAPEIV-----AYAARIALELGADA----MKIKY--TG-------DPKT-----FSWAVKVA-GK 196 (263)
T ss_dssp EE--ECCCSTTCCCTTCHHHH-----HHHHHHHHHHTCSE----EEEEC--CS-------SHHH-----HHHHHHHT-TT
T ss_pred EE--eeCCCCccccCCCHHHH-----HHHHHHHHHcCCCE----EEEcC--CC-------CHHH-----HHHHHHhC-CC
Confidence 76 5677776311 11111 11122223346654 78773 43 3444 34444455 33
Q ss_pred CceeeecCCCC---ChHHHHHHHhhhhc-CCCCceeEEeehhhhhhhHHhhhcCCcccHHHHHHHHHHH
Q 016109 299 VPGIMFLSGGQ---SEVEATLNLNAMNQ-APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVR 363 (395)
Q Consensus 299 VpgVvFLSGGq---SeeeAt~~LnAiN~-~~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ~~l~~r 363 (395)
+| +..|||- +.+++-+++...-+ +.. ..|.||++-++ +|..++-++|.+.
T Consensus 197 ~p--V~asGGi~~~~~~~~l~~i~~~~~aGA~----GvsvgraI~~~---------~dp~~~~~~l~~~ 250 (263)
T 1w8s_A 197 VP--VLMSGGPKTKTEEDFLKQVEGVLEAGAL----GIAVGRNVWQR---------RDALKFARALAEL 250 (263)
T ss_dssp SC--EEEECCSCCSSHHHHHHHHHHHHHTTCC----EEEESHHHHTS---------TTHHHHHHHHHHH
T ss_pred Ce--EEEEeCCCCCCHHHHHHHHHHHHHcCCe----EEEEehhhcCC---------cCHHHHHHHHHHH
Confidence 46 6789998 46788888853333 322 77899987654 4667666666544
No 11
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=46.73 E-value=34 Score=29.50 Aligned_cols=83 Identities=20% Similarity=0.249 Sum_probs=62.6
Q ss_pred cchHHHHHHHHHHhhCC--CCceEeeccCCcchHHHhhh-cCCCCch------hhhHhhhhhhcccCCCCCceEEEeecc
Q 016109 46 GAYTEELVKTAKTIASP--GRGILAIDESNATCGKRLAS-IGLDNTE------TNRQAYRQLLLTTPGLGDYISGAILFE 116 (395)
Q Consensus 46 ~~~~~eL~~~A~~i~a~--gKGILAaDES~gt~~Krl~~-iGiente------enrr~yRelL~ttp~~~~~IsGvILfe 116 (395)
...|+++.+.|+++..- |-.|.| |+++++.|+. -||+-+. +.|...-++|- +..|.-||-|.
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~-----~geIdlVInt~ 82 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARVA-----EGRILAVIFFR 82 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHHH-----TTCEEEEEEEC
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHHH-----CCCccEEEEcc
Confidence 56789999999999998 888998 8999999998 8988654 23444445542 46799999999
Q ss_pred c--ccccc-ccCCcchHHHHhhCCC
Q 016109 117 E--TLYQS-TTDGKKFVDCLREEKI 138 (395)
Q Consensus 117 E--Tl~Q~-~~dG~~~~~~L~~kGI 138 (395)
+ + .|. ..||..+...--..+|
T Consensus 83 ~pl~-~~~h~~D~~~IrR~A~~~~I 106 (134)
T 2xw6_A 83 DPLT-AQPHEPDVQALLRVCDVHGV 106 (134)
T ss_dssp CTTT-CCTTSCCSHHHHHHHHHHTC
T ss_pred Cccc-CCCccchHHHHHHHHHHcCC
Confidence 8 6 555 6787776665545443
No 12
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=43.27 E-value=37 Score=28.83 Aligned_cols=88 Identities=11% Similarity=0.127 Sum_probs=55.7
Q ss_pred ccccccccccccccchHHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhh------h----Hhhhhhhccc
Q 016109 33 RFATRRVSVPIRAGAYTEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETN------R----QAYRQLLLTT 102 (395)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteen------r----r~yRelL~tt 102 (395)
+.|... .........++++.+.|+++..-|--|.| |+.+.+.|+..||+-+.-+ | ...+++|-
T Consensus 21 ~lP~~g-vliSv~d~dK~~l~~~a~~l~~lGf~i~A----T~GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-- 93 (143)
T 2yvq_A 21 KIPQKG-ILIGIQQSFRPRFLGVAEQLHNEGFKLFA----TEATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-- 93 (143)
T ss_dssp CCCCSE-EEEECCGGGHHHHHHHHHHHHTTTCEEEE----EHHHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHH--
T ss_pred CCCCCC-EEEEecccchHHHHHHHHHHHHCCCEEEE----CchHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHH--
Confidence 333334 33334456789999999999998777887 4567899999999876522 3 33444442
Q ss_pred CCCCCceEEEeeccccccccccCCcchH
Q 016109 103 PGLGDYISGAILFEETLYQSTTDGKKFV 130 (395)
Q Consensus 103 p~~~~~IsGvILfeETl~Q~~~dG~~~~ 130 (395)
+..|.-||-+.+...|...||..+.
T Consensus 94 ---~g~i~lVInt~~~~~~~~~d~~~iR 118 (143)
T 2yvq_A 94 ---DGSIDLVINLPNNNTKFVHDNYVIR 118 (143)
T ss_dssp ---TTSCCEEEECCCCCGGGHHHHHHHH
T ss_pred ---CCCceEEEECCCCCCcCCccHHHHH
Confidence 3457777777655444333443333
No 13
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=33.25 E-value=42 Score=32.27 Aligned_cols=137 Identities=18% Similarity=0.222 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhhCCCCceEeeccCCcchHHHhhhcCCCCchhhhHhhhhhhcccCCCCCceEEEeeccccccccc--cCC
Q 016109 49 TEELVKTAKTIASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTTPGLGDYISGAILFEETLYQST--TDG 126 (395)
Q Consensus 49 ~~eL~~~A~~i~a~gKGILAaDES~gt~~Krl~~iGienteenrr~yRelL~ttp~~~~~IsGvILfeETl~Q~~--~dG 126 (395)
.+|....+++|+..-+-=+-+|=.+| || +.+.-.|.-|+++ .+ -+.||.|=|-+.-.+. .+|
T Consensus 67 ~~em~~~~~~I~r~~~~PviaD~d~G--------yg--~~~~~~~~v~~l~-~a-----Ga~gv~iED~~~pKrcgh~~g 130 (287)
T 3b8i_A 67 LSEFVEQATRIGRVARLPVIADADHG--------YG--NALNVMRTVVELE-RA-----GIAALTIEDTLLPAQFGRKST 130 (287)
T ss_dssp HHHHHHHHHHHHTTCSSCEEEECTTC--------SS--SHHHHHHHHHHHH-HH-----TCSEEEEECBCCSCCTTTCTT
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCC--------CC--CHHHHHHHHHHHH-Hh-----CCeEEEEcCCCCccccCCCCC
Confidence 45777777778764443345665554 23 3333345555554 22 3667776666542111 123
Q ss_pred c-----chHH---HHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeeccCCCcCHHHH
Q 016109 127 K-----KFVD---CLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPCGPSALAV 198 (395)
Q Consensus 127 ~-----~~~~---~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i~~~Ps~~aI 198 (395)
+ -+.+ .+.+.++-|+++| .+.+ +. ...|||++.+|++.|.+.||+ .|-+...|+...+
T Consensus 131 kl~~~~e~~~~I~aa~~a~~~~~~~i------~aRt-da-a~~gl~~ai~Ra~ay~eAGAd------~i~~e~~~~~~~~ 196 (287)
T 3b8i_A 131 DLICVEEGVGKIRAALEARVDPALTI------IART-NA-ELIDVDAVIQRTLAYQEAGAD------GICLVGVRDFAHL 196 (287)
T ss_dssp CBCCHHHHHHHHHHHHHHCCSTTSEE------EEEE-ET-TTSCHHHHHHHHHHHHHTTCS------EEEEECCCSHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCCCCcEE------EEec-hh-hhcCHHHHHHHHHHHHHcCCC------EEEecCCCCHHHH
Confidence 3 2333 3357777555544 1111 11 346999999999999999987 3444455664332
Q ss_pred HHHHhHHHHHHHHHHhCCcceeecccccCCC
Q 016109 199 KEAAWGLARYAAISQDNGLVPIVEPEILLDG 229 (395)
Q Consensus 199 ~~na~~LArYA~icQ~~GLVPIVEPEVl~dg 229 (395)
..+|++-. +|++ ++..|
T Consensus 197 ----------~~i~~~~~-~P~i---i~~~g 213 (287)
T 3b8i_A 197 ----------EAIAEHLH-IPLM---LVTYG 213 (287)
T ss_dssp ----------HHHHTTCC-SCEE---EECTT
T ss_pred ----------HHHHHhCC-CCEE---EeCCC
Confidence 24666665 7988 54444
No 14
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=32.63 E-value=40 Score=29.69 Aligned_cols=84 Identities=15% Similarity=0.134 Sum_probs=61.2
Q ss_pred ccchHHHHHHHHHHhhCC--CCceEeeccCCcchHHHhhh-cCCCCchh------hhHhhhhhhcccCCCCCceEEEeec
Q 016109 45 AGAYTEELVKTAKTIASP--GRGILAIDESNATCGKRLAS-IGLDNTET------NRQAYRQLLLTTPGLGDYISGAILF 115 (395)
Q Consensus 45 ~~~~~~eL~~~A~~i~a~--gKGILAaDES~gt~~Krl~~-iGientee------nrr~yRelL~ttp~~~~~IsGvILf 115 (395)
....|+++.+.|+++..- |-.|.| |+++++.|+. -||+-+.- .|.+.-++|- +..|.-||-|
T Consensus 19 ~D~dK~~~v~~ak~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~-----~geIdlVInt 89 (152)
T 1b93_A 19 HDHCKQMLMSWVERHQPLLEQHVLYA----TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALIS-----EGKIDVLIFF 89 (152)
T ss_dssp CGGGHHHHHHHHHHTHHHHTTSEEEE----ETTHHHHHHHHHCCCCEEECCGGGTHHHHHHHHHH-----TTCCCEEEEE
T ss_pred ehhhHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHHhCceeEEEEecCCCCCchHHHHHH-----CCCccEEEEc
Confidence 366889999999999998 888998 8999999999 99987542 3444444542 4678889999
Q ss_pred cc--ccccc-ccCCcchHHHHhhCCC
Q 016109 116 EE--TLYQS-TTDGKKFVDCLREEKI 138 (395)
Q Consensus 116 eE--Tl~Q~-~~dG~~~~~~L~~kGI 138 (395)
.+ + .|. ..||..+...--..+|
T Consensus 90 ~~pl~-~~~h~~D~~~IrR~A~~~~I 114 (152)
T 1b93_A 90 WDPLN-AVPHDPDVKALLRLATVWNI 114 (152)
T ss_dssp CCTTS-CCTTHHHHHHHHHHHHHTTC
T ss_pred CCccc-CCcccccHHHHHHHHHHcCC
Confidence 98 5 454 4566655554445543
No 15
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=31.92 E-value=58 Score=29.58 Aligned_cols=85 Identities=18% Similarity=0.174 Sum_probs=62.7
Q ss_pred cccchHHHHHHHHHHhhCC--CCceEeeccCCcchHHHhhh-cCCCCchh------hhHhhhhhhcccCCCCCceEEEee
Q 016109 44 RAGAYTEELVKTAKTIASP--GRGILAIDESNATCGKRLAS-IGLDNTET------NRQAYRQLLLTTPGLGDYISGAIL 114 (395)
Q Consensus 44 ~~~~~~~eL~~~A~~i~a~--gKGILAaDES~gt~~Krl~~-iGientee------nrr~yRelL~ttp~~~~~IsGvIL 114 (395)
.....|+++...|+++..- |-.|.| |+++++.|+. .||+-+.- .|.+.-++|- +..|.-||-
T Consensus 34 v~D~dK~~lv~~ak~~~~lL~Gf~L~A----T~gTa~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~-----~geIdlVIn 104 (178)
T 1vmd_A 34 AHDRRKRDLLEWVSFNLGTLSKHELYA----TGTTGALLQEKLGLKVHRLKSGPLGGDQQIGAMIA-----EGKIDVLIF 104 (178)
T ss_dssp ECGGGHHHHHHHHHHSHHHHTTSEEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHHH-----TTSCCEEEE
T ss_pred EehhhHHHHHHHHHHHHHHhcCCEEEE----chHHHHHHHHHhCceeEEEeecCCCCCchHHHHHH-----CCCccEEEE
Confidence 3467889999999999998 888998 8999999999 99987542 3344444442 467888999
Q ss_pred ccc--ccccc-ccCCcchHHHHhhCCC
Q 016109 115 FEE--TLYQS-TTDGKKFVDCLREEKI 138 (395)
Q Consensus 115 feE--Tl~Q~-~~dG~~~~~~L~~kGI 138 (395)
|.+ + .|. ..||..+...--..+|
T Consensus 105 t~dPl~-~~~h~~D~~~IRR~A~~~~I 130 (178)
T 1vmd_A 105 FWDPLE-PQAHDVDVKALIRIATVYNI 130 (178)
T ss_dssp ECCSSS-CCTTSCCHHHHHHHHHHTTC
T ss_pred ccCccC-CCcccccHHHHHHHHHHcCC
Confidence 998 5 555 5677666655555554
No 16
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=30.64 E-value=2.8e+02 Score=25.54 Aligned_cols=159 Identities=16% Similarity=0.136 Sum_probs=83.6
Q ss_pred eecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeeeeccCC--CcCHHHHHHHHhHHHHHHHHHHhCCcce
Q 016109 142 IKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTVVSIPC--GPSALAVKEAAWGLARYAAISQDNGLVP 219 (395)
Q Consensus 142 IKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsVi~i~~--~Ps~~aI~~na~~LArYA~icQ~~GLVP 219 (395)
|||..- ..+|.+. .-.+-....+.+ .+.||.-=-+ |+.+.. ..-...+ ...+++....|... .+|
T Consensus 51 v~v~tv-igFP~G~-----~~~~~k~~E~~~-i~~GAdEID~--Vinig~~~~g~~~~v---~~ei~~v~~a~~~~-~lK 117 (226)
T 1vcv_A 51 VKLCVV-ADFPFGA-----LPTASRIALVSR-LAEVADEIDV--VAPIGLVKSRRWAEV---RRDLISVVGAAGGR-VVK 117 (226)
T ss_dssp SEEEEE-ESTTTCC-----SCHHHHHHHHHH-HTTTCSEEEE--ECCHHHHHTTCHHHH---HHHHHHHHHHTTTS-EEE
T ss_pred CeEEEE-eCCCCCC-----CchHHHHHHHHH-HHCCCCEEEE--ecchhhhcCCCHHHH---HHHHHHHHHHHcCC-Cce
Confidence 677533 4555332 124445566666 7889765443 555521 1122222 34555555566544 788
Q ss_pred -eecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCCccccccccccc--cCC----CCCCCCCCCChHHHHHHHHHHhh
Q 016109 220 -IVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENNVVLEGILLKPS--MVT----PGAEHKEKASPETIAKYTLTMLK 292 (395)
Q Consensus 220 -IVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~V~LeG~lLKpn--MV~----pG~~~~~k~s~~evA~~Tv~~l~ 292 (395)
|+|.-.|- +..+.++ .+...+.|.++ +|.| ... -+...+.-+|+++| ++|+
T Consensus 118 vIlEt~~Lt--~eei~~a-----------~~ia~eaGADf----VKTSTGf~~~~~~~~~~~~~gAt~~dv-----~lm~ 175 (226)
T 1vcv_A 118 VITEEPYLR--DEERYTL-----------YDIIAEAGAHF----IKSSTGFAEEAYAARQGNPVHSTPERA-----AAIA 175 (226)
T ss_dssp EECCGGGCC--HHHHHHH-----------HHHHHHHTCSE----EECCCSCCCHHHHHHTTCCSSCCHHHH-----HHHH
T ss_pred EEEeccCCC--HHHHHHH-----------HHHHHHcCCCE----EEeCCCCCccccccccCCCCCCCHHHH-----HHHH
Confidence 99998872 1112211 12222346665 7877 430 00000124777877 3455
Q ss_pred cc---CCCCCceeeecCCCC-ChHHHHHHHhhhhcCCC--CceeEEeehhh
Q 016109 293 RR---VPPAVPGIMFLSGGQ-SEVEATLNLNAMNQAPN--PWHVSFSYARA 337 (395)
Q Consensus 293 rt---vP~aVpgVvFLSGGq-SeeeAt~~LnAiN~~~~--PW~LsFSfgRA 337 (395)
++ +++.+ ||-. |||- +.++|-..+.++..+.. -..+..|.+.+
T Consensus 176 ~~i~~~g~~v-~vKa-aGGirt~~~al~~i~a~~~Ga~~~~fRiGtS~~~~ 224 (226)
T 1vcv_A 176 RYIKEKGYRL-GVKM-AGGIRTREQAKAIVDAIGWGEDPARVRLGTSTPEA 224 (226)
T ss_dssp HHHHHHTCCC-EEEE-ESSCCSHHHHHHHHHHHCSCSCTTTEEEEESCGGG
T ss_pred HHHHHhCCCc-eEEE-eCCCCCHHHHHHHHHHHHCCCCcCCceEecCchhh
Confidence 55 67776 7765 7776 48899999988732222 23455555443
No 17
>3nw0_B Melanoma-associated antigen G1; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=30.57 E-value=93 Score=28.72 Aligned_cols=117 Identities=21% Similarity=0.267 Sum_probs=67.3
Q ss_pred CcCHHHHHHHHhHHHHHHHHHHhCCcceeeccccc--CCCCCchhHHHHHHHHHHHHHHHHHHh-CCccc-----cc--c
Q 016109 192 GPSALAVKEAAWGLARYAAISQDNGLVPIVEPEIL--LDGDHPIERTLEVAEKVWSEVFFYLAE-NNVVL-----EG--I 261 (395)
Q Consensus 192 ~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl--~dgdh~i~~~~~vte~vL~~v~~aL~~-~~V~L-----eG--~ 261 (395)
.++...+..-+..|.||.-.+.+.. .||-.-|++ +.++|+ ++. ..|+...-+.|.. -|+.| .+ -
T Consensus 2 ~~~~~~l~~kv~~LVrflL~k~~~k-~pI~r~emlk~V~~~y~-~~F----~~I~~~A~e~L~~vFG~elkEvd~~~~~Y 75 (217)
T 3nw0_B 2 PRSQKQLELKVSELVQFLLIKDQKK-IPIKRADILKHVIGDYK-DIF----PDLFKRAAERLQYVFGYKLVELEPKSNTY 75 (217)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHT-CCEEHHHHHHHTTGGGG-GGH----HHHHHHHHHHHHHHHCEEEEESSTTCSEE
T ss_pred CCcccHHHHHHHHHHHHHHHHhhCC-CCccHHHHHHHHhHHhh-HHH----HHHHHHHHHHHHHHcCeEEEEecCCCceE
Confidence 3567788899999999999988876 799999986 444543 222 2244444555544 23222 11 1
Q ss_pred ccccccCCCCCCCCCCCCh-HHHHHHHHHHhhccCCCCCceeeecCCCC-ChHHHHHHHhhhhc
Q 016109 262 LLKPSMVTPGAEHKEKASP-ETIAKYTLTMLKRRVPPAVPGIMFLSGGQ-SEVEATLNLNAMNQ 323 (395)
Q Consensus 262 lLKpnMV~pG~~~~~k~s~-~evA~~Tv~~l~rtvP~aVpgVvFLSGGq-SeeeAt~~LnAiN~ 323 (395)
+|-+.+- | ..+....+. .+.+...+-.+ |.|+.|++|+. ||++--..|+.|+-
T Consensus 76 iLv~~L~-p-l~~~~~l~~~~~~pk~GLL~~-------IL~~Ifm~Gn~~~Ee~lw~~L~~lgv 130 (217)
T 3nw0_B 76 ILINTLE-P-VEEDAEMRGDQGTPTTGLLMI-------VLGLIFMKGNTLKETEAWDFLRRLGV 130 (217)
T ss_dssp EEEECSC-C-CC----CCC-CCCHHHHHHHH-------HHHHHHHTTTCBCHHHHHHHHHHC-C
T ss_pred EEEECCC-c-cccCCccCCcccccchhHHHH-------HHHHHHhcCCCCCHHHHHHHHHhcCC
Confidence 2332221 0 011111111 12233333322 36999999998 88899999998875
No 18
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=29.55 E-value=4.1e+02 Score=25.96 Aligned_cols=144 Identities=17% Similarity=0.137 Sum_probs=80.8
Q ss_pred HCCCCcceeeeeecc-CCCcCHHHHHHHHhHHHHHHHHHHhCCcceeecccccCC------CCCchhHHHHHHHHHHHHH
Q 016109 175 KQGARFAKWRTVVSI-PCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLD------GDHPIERTLEVAEKVWSEV 247 (395)
Q Consensus 175 ~~Ga~FAKWRsVi~i-~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~d------gdh~i~~~~~vte~vL~~v 247 (395)
.+||..-|.= +.| .+.|.+ .++-..+++...-|.+.||.=++||=+... .++|.+.....
T Consensus 139 rlGADaV~~l--~~i~~Gs~~e---~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~a-------- 205 (307)
T 3fok_A 139 DRGVDFAKTL--VRINLSDAGT---APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQS-------- 205 (307)
T ss_dssp HHTCCEEEEE--EEECTTCTTH---HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHH--------
T ss_pred HCCCCEEEEE--EEECCCChhH---HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHH--------
Confidence 4599988873 344 244565 466777888889999999988998633322 24665522222
Q ss_pred HHHHHhCCccccccccccccCCCCCCCCCCCChHHHHHHHHHHhhccCCCCCceeeecCCCCC--hHHHHHHHh-hhhcC
Q 016109 248 FFYLAENNVVLEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQS--EVEATLNLN-AMNQA 324 (395)
Q Consensus 248 ~~aL~~~~V~LeG~lLKpnMV~pG~~~~~k~s~~evA~~Tv~~l~rtvP~aVpgVvFLSGGqS--eeeAt~~Ln-AiN~~ 324 (395)
.+--.+.|.+.-=+++|.+.+ |+. -++.. ..| +| |+++.|+-. +++.-..+. +|.
T Consensus 206 aRiAaELGADs~~tivK~~y~------------e~f----~~Vv~-a~~--vP-VViaGG~k~~~~~e~L~~v~~A~~-- 263 (307)
T 3fok_A 206 VAIAAGLGNDSSYTWMKLPVV------------EEM----ERVME-STT--MP-TLLLGGEGGNDPDATFASWEHALT-- 263 (307)
T ss_dssp HHHHHTCSSCCSSEEEEEECC------------TTH----HHHGG-GCS--SC-EEEECCSCC--CHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCcCCCEEEeCCc------------HHH----HHHHH-hCC--CC-EEEeCCCCCCCHHHHHHHHHHHHH--
Confidence 222233455543458997663 111 22222 223 33 666766652 345444443 222
Q ss_pred CCCceeEEeehhhhhhhHHhhhcCCcccHHHHHHHHH
Q 016109 325 PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLL 361 (395)
Q Consensus 325 ~~PW~LsFSfgRALq~~~l~~W~Gk~env~aAQ~~l~ 361 (395)
.+=.-...+||.+ |+...+|..++-+++.
T Consensus 264 -~aGa~Gv~vGRNI-------fQ~~~~dp~~~v~al~ 292 (307)
T 3fok_A 264 -LPGVRGLTVGRTL-------LYPQDGDVAAAVDTAA 292 (307)
T ss_dssp -STTEEEEEECTTT-------SSCSSSCHHHHHHHHH
T ss_pred -hCCCeEEeechhh-------ccCCCCCHHHHHHHHH
Confidence 1436678999976 5544567776655554
No 19
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=23.48 E-value=1.1e+02 Score=27.34 Aligned_cols=54 Identities=6% Similarity=-0.106 Sum_probs=36.3
Q ss_pred HHHHHhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHHHHHHHHHhCC
Q 016109 198 VKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAENN 255 (395)
Q Consensus 198 I~~na~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~~v~~aL~~~~ 255 (395)
..++...+ +...++.|.+|+ +=++..+|.|+...-.......|.-++++|+.|+
T Consensus 224 ~~~~~~~~---~~~L~~~g~~~~-~~~~~~~g~H~~~~w~~~l~~~l~~~~~~~~~~~ 277 (280)
T 1r88_A 224 AMGNSRMF---YNQYRSVGGHNG-HFDFPASGDNGWGSWAPQLGAMSGDIVGAIRHHH 277 (280)
T ss_dssp HHHHHHHH---HHHHHHTTCCSE-EEECCSSCCSSHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHH---HHHHHHCCCcce-EEEecCCCCcChhHHHHHHHHHHHHHHHHHhhhc
Confidence 45556644 456778884443 3344568999998777777888999999998765
No 20
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=22.95 E-value=75 Score=32.29 Aligned_cols=160 Identities=15% Similarity=0.111 Sum_probs=82.6
Q ss_pred chHHHHHHHHHHHCCCCcceeeeeecc-CC------CcCHHHHHHH-HhHHHHHHHHH----Hh--CCcceeecc---cc
Q 016109 163 LDGLASRSTEYYKQGARFAKWRTVVSI-PC------GPSALAVKEA-AWGLARYAAIS----QD--NGLVPIVEP---EI 225 (395)
Q Consensus 163 LDgL~eR~~~y~~~Ga~FAKWRsVi~i-~~------~Ps~~aI~~n-a~~LArYA~ic----Q~--~GLVPIVEP---EV 225 (395)
+..-.+-|.++.+.| +.+|.-- +. .|-...|... +..|++||.-. -+ -|-|-=.|- +.
T Consensus 103 m~~a~e~i~~aI~aG-----FtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~v~~~ 177 (420)
T 2fiq_A 103 MEKSVELVKAYVRAG-----FSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGG 177 (420)
T ss_dssp HHHHHHHHHHHHHTT-----CCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC---
T ss_pred hhhHHHHHHHHHHhC-----CCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecCCCCC
Confidence 344446677777788 4444433 33 4555555544 78888887765 22 222322231 21
Q ss_pred cCC---C--CCchhHHHHHHHHHHHHHHHHHHhCCccc--cccc-cccccCCCCCCCC----CCCChHHHHHHHHHHhhc
Q 016109 226 LLD---G--DHPIERTLEVAEKVWSEVFFYLAENNVVL--EGIL-LKPSMVTPGAEHK----EKASPETIAKYTLTMLKR 293 (395)
Q Consensus 226 l~d---g--dh~i~~~~~vte~vL~~v~~aL~~~~V~L--eG~l-LKpnMV~pG~~~~----~k~s~~evA~~Tv~~l~r 293 (395)
..+ + -.+.+.| ++.+...-++|+++||.. ++++ |= |.+|..+. .++..+.. .-|+.
T Consensus 178 ~~~~~~~~~~T~PeeA----~~Fve~~~~~~~~tGvd~~~~~vi~LA---V~iGt~HG~y~~~~ld~e~l-----~~I~~ 245 (420)
T 2fiq_A 178 EASAIQSVHITHVEDA----ANTLRTHQKAFIARGLTEALTRVIAIV---VQPGVEFDHSNIIHYQPQEA-----QALAQ 245 (420)
T ss_dssp -------CCCCCHHHH----HHHHHHHHHHHHTTTCHHHHHTEEEEE---CCCSCEECSSCEECCCGGGG-----HHHHH
T ss_pred cccccCCCCCCCHHHH----HHHHHHHHHHHHhhCCCcccccceEEE---EeCCccCCCCCCCCcCHHHH-----HHHHH
Confidence 111 1 1223333 333555677888899864 4443 32 34565544 23444433 33334
Q ss_pred cCCCCCceeee--cCCC-CChHHHHHHHh--hhhcC-CCCceeEEeehhhhhhhHH
Q 016109 294 RVPPAVPGIMF--LSGG-QSEVEATLNLN--AMNQA-PNPWHVSFSYARALQNTVL 343 (395)
Q Consensus 294 tvP~aVpgVvF--LSGG-qSeeeAt~~Ln--AiN~~-~~PW~LsFSfgRALq~~~l 343 (395)
.++ +||+|| =+|- ++++ .-..+= -|++. -.| .|+|.|.+||.+-..
T Consensus 246 ~v~--~P~LVle~HGgSg~~~e-~l~~~v~~Gi~kiNV~t-~l~~a~~~al~~l~~ 297 (420)
T 2fiq_A 246 WIE--NTRMVYEAHSTDYQTRT-AYWELVRDHFAILKVGP-ALTFALREAIFALAQ 297 (420)
T ss_dssp HHT--TSSCEEEESCCTTCCHH-HHHHHHHTTEEEEEECH-HHHHHHHHHHHHHHH
T ss_pred hcC--CCCEEEecCCCCCCCHH-HHHHHHHcCCCEEEECH-HHHHHHHHHHHHHHH
Confidence 443 488997 6664 4554 433331 23331 256 888888888877653
No 21
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=21.51 E-value=1e+02 Score=29.57 Aligned_cols=56 Identities=16% Similarity=0.161 Sum_probs=43.2
Q ss_pred cchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHHHHHHHHHHCCCCcceeeee
Q 016109 127 KKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSTEYYKQGARFAKWRTV 186 (395)
Q Consensus 127 ~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWRsV 186 (395)
++++++++++|+-+||=.|-|.....|.++. .++-...-++.|.+-|..|=|+-..
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~----~~~~~~~da~~~a~wGvdylK~D~~ 141 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGT----TLDKVVQDAQTFAEWKVDMLKLDGC 141 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCB----CGGGHHHHHHHHHHTTCCEEEEECT
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCch----hHhHHHHHHHHHHHhCCceEeeccC
Confidence 5789999999999999999998876665431 2555555677888899998887543
No 22
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=21.41 E-value=4.7e+02 Score=23.86 Aligned_cols=164 Identities=12% Similarity=0.094 Sum_probs=90.5
Q ss_pred CceEEEeeccccccccccCCcchHHHHhhCCCcceeecCCCcccCCCCCCCCCCCCchHHH--HHHH-HHHHCCCCccee
Q 016109 107 DYISGAILFEETLYQSTTDGKKFVDCLREEKIVPGIKVDKGLVPLPGSNNESWCQGLDGLA--SRST-EYYKQGARFAKW 183 (395)
Q Consensus 107 ~~IsGvILfeETl~Q~~~dG~~~~~~L~~kGIvpGIKVDkGl~pl~g~~~e~~t~GLDgL~--eR~~-~y~~~Ga~FAKW 183 (395)
..+-|+|++.-... .+..+.|.+.| +|-|=+|..... . .....-+.|+-. ..+. ...+.|.
T Consensus 121 ~~vdgiI~~~~~~~------~~~~~~l~~~~-iPvV~i~~~~~~---~-~~~~~V~~D~~~~~~~a~~~L~~~G~----- 184 (348)
T 3bil_A 121 HGVDGIICVPNEEC------ANQLEDLQKQG-MPVVLVDRELPG---D-STIPTATSNPQPGIAAAVELLAHNNA----- 184 (348)
T ss_dssp TTCSCEEECCCGGG------HHHHHHHHHC--CCEEEESSCCSC---C--CCCEEEEECHHHHHHHHHHHHHTTC-----
T ss_pred CCCCEEEEeCCCCC------hHHHHHHHhCC-CCEEEEcccCCC---C-CCCCEEEeChHHHHHHHHHHHHHCCC-----
Confidence 45778888753321 14556677777 477777764321 0 011223344322 2233 3345663
Q ss_pred eeeeccCCCcCHHHHHHHHhHHHHHHHHHHhCCcceeecccccCCCCCchhHHHHHHHHHHH---------------HHH
Q 016109 184 RTVVSIPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWS---------------EVF 248 (395)
Q Consensus 184 RsVi~i~~~Ps~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dgdh~i~~~~~vte~vL~---------------~v~ 248 (395)
|.+.-+.+.+.... ...-+.-|-..++++|+ +|++...++.+.+..++.++++|. .++
T Consensus 185 ~~I~~i~~~~~~~~---~~~R~~Gf~~al~~~g~----~~~~v~~~~~~~~~~~~~~~~ll~~~~~ai~~~nD~~A~g~~ 257 (348)
T 3bil_A 185 LPIGYLSGPMDTST---GRERLEDFKAACANSKI----GEQLVFLGGYEQSVGFEGATKLLDQGAKTLFAGDSMMTIGVI 257 (348)
T ss_dssp CSEEEECCCTTSHH---HHHHHHHHHHHHHHTTC----CCCEEECCCSSHHHHHHHHHHHHHTTCSEEEESSHHHHHHHH
T ss_pred CeEEEEeCCCCCcc---HHHHHHHHHHHHHHcCc----CccEEEcCCCCHHHHHHHHHHHHcCCCCEEEEcChHHHHHHH
Confidence 44444443333221 12334556677899997 566666788888877777777765 367
Q ss_pred HHHHhCCccccc---------cccccccCCCCCCCCCCCChHHHHHHHHHHhhccC
Q 016109 249 FYLAENNVVLEG---------ILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRV 295 (395)
Q Consensus 249 ~aL~~~~V~LeG---------~lLKpnMV~pG~~~~~k~s~~evA~~Tv~~l~rtv 295 (395)
++|.++|+-.++ +-+ ..++.|.. .+-...+++++...++.|.+.+
T Consensus 258 ~al~~~G~~vP~disvvG~D~~~~-~~~~~p~l-ttv~~~~~~~g~~Av~~l~~~i 311 (348)
T 3bil_A 258 EACHKAGLVIGKDVSVIGFDTHPL-FALQPHPL-TVIDQNVEQLAQRAVSILTELI 311 (348)
T ss_dssp HHHHHTTCCBTTTBEEEEESCCGG-GGGSSSCC-CEEECCHHHHHHHHHHHHHCC-
T ss_pred HHHHHcCCCCCCCeEEEEeCCcHH-HHhcCCCc-eEEEcCHHHHHHHHHHHHHHHh
Confidence 888888865432 111 12333433 2334567888888888876543
No 23
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.12 E-value=3e+02 Score=22.98 Aligned_cols=67 Identities=16% Similarity=0.136 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHH-hCCccccccccccccCC-CCCCC---------------CCCCChHHHHHHHHHHhhccCCCCCcee
Q 016109 240 AEKVWSEVFFYLA-ENNVVLEGILLKPSMVT-PGAEH---------------KEKASPETIAKYTLTMLKRRVPPAVPGI 302 (395)
Q Consensus 240 te~vL~~v~~aL~-~~~V~LeG~lLKpnMV~-pG~~~---------------~~k~s~~evA~~Tv~~l~rtvP~aVpgV 302 (395)
..|...+.+..+. ..++ +-++|.|.+|. ||... ....++++||.+.+.++. .+...|=
T Consensus 134 ~sK~~~e~~~~~~~~~~i--~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~---~~~~~g~ 208 (224)
T 3h2s_A 134 GALYQYYEYQFLQMNANV--NWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLE---HPTAIRD 208 (224)
T ss_dssp HHHHHHHHHHHHTTCTTS--CEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHH---SCCCTTS
T ss_pred HHHHHHHHHHHHHhcCCC--cEEEEcCccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhc---CccccCC
Confidence 3333344445554 3443 44788888876 43211 123679999999999998 4555565
Q ss_pred eecCCCCCh
Q 016109 303 MFLSGGQSE 311 (395)
Q Consensus 303 vFLSGGqSe 311 (395)
+|.-+|+..
T Consensus 209 ~~~~~~~~~ 217 (224)
T 3h2s_A 209 RIVVRDADL 217 (224)
T ss_dssp EEEEEECC-
T ss_pred EEEEecCcc
Confidence 666666544
Done!