Query 016111
Match_columns 395
No_of_seqs 198 out of 1971
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 03:53:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016111.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016111hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03172 chalcone synthase fam 100.0 2.2E-62 4.7E-67 481.5 38.6 381 6-388 6-387 (393)
2 PLN03170 chalcone synthase; Pr 100.0 2.5E-62 5.4E-67 482.8 37.5 381 8-390 12-393 (401)
3 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 9.7E-64 2.1E-68 471.9 24.1 314 15-388 2-323 (323)
4 PLN03173 chalcone synthase; Pr 100.0 8.4E-62 1.8E-66 477.1 38.3 385 5-392 5-390 (391)
5 PLN03168 chalcone synthase; Pr 100.0 1.2E-61 2.7E-66 476.4 38.5 378 9-388 8-386 (389)
6 PLN03169 chalcone synthase fam 100.0 3.3E-60 7.2E-65 467.4 37.4 365 15-388 20-389 (391)
7 PLN03171 chalcone synthase-lik 100.0 1.5E-58 3.4E-63 456.3 38.0 373 12-392 18-399 (399)
8 cd00831 CHS_like Chalcone and 100.0 4.4E-55 9.4E-60 429.2 35.8 355 16-385 1-361 (361)
9 PRK12880 3-oxoacyl-(acyl carri 100.0 3.8E-53 8.3E-58 412.4 27.0 318 14-390 5-341 (353)
10 PRK05963 3-oxoacyl-(acyl carri 100.0 7.8E-53 1.7E-57 407.8 27.2 312 16-387 3-326 (326)
11 COG3424 BcsA Predicted naringe 100.0 1.6E-51 3.5E-56 372.7 29.0 350 17-389 2-354 (356)
12 PRK07204 3-oxoacyl-(acyl carri 100.0 8E-52 1.7E-56 401.3 28.2 316 14-387 2-329 (329)
13 PLN02326 3-oxoacyl-[acyl-carri 100.0 7.4E-52 1.6E-56 408.0 25.9 315 14-387 45-379 (379)
14 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 3.2E-51 6.9E-56 396.5 26.1 314 16-388 2-326 (326)
15 PRK12879 3-oxoacyl-(acyl carri 100.0 2.3E-50 5E-55 390.5 27.9 315 15-388 3-325 (325)
16 PRK09258 3-oxoacyl-(acyl carri 100.0 5.6E-50 1.2E-54 389.8 26.8 322 15-387 4-338 (338)
17 cd00830 KAS_III Ketoacyl-acyl 100.0 1.1E-48 2.3E-53 377.8 26.2 311 16-385 1-320 (320)
18 PRK06840 hypothetical protein; 100.0 5.4E-48 1.2E-52 376.0 28.9 317 15-389 3-337 (339)
19 PLN02932 3-ketoacyl-CoA syntha 100.0 4.4E-47 9.4E-52 376.6 32.7 354 13-389 64-455 (478)
20 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 6E-48 1.3E-52 372.5 25.9 310 16-387 2-318 (318)
21 PRK04262 hypothetical protein; 100.0 6.3E-48 1.4E-52 376.2 24.6 305 15-389 1-310 (347)
22 PRK06816 3-oxoacyl-(acyl carri 100.0 1.7E-47 3.7E-52 376.8 26.6 331 15-388 1-378 (378)
23 PRK09352 3-oxoacyl-(acyl carri 100.0 4.3E-47 9.3E-52 366.7 27.6 311 15-388 2-319 (319)
24 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 4E-47 8.6E-52 369.7 23.0 305 16-389 1-309 (345)
25 PRK07515 3-oxoacyl-(acyl carri 100.0 3.8E-46 8.3E-51 367.1 27.1 343 16-387 2-371 (372)
26 PLN02377 3-ketoacyl-CoA syntha 100.0 1.1E-44 2.4E-49 361.4 33.0 352 13-389 94-479 (502)
27 PLN02854 3-ketoacyl-CoA syntha 100.0 3.5E-44 7.5E-49 357.7 32.0 351 13-389 110-495 (521)
28 PLN02192 3-ketoacyl-CoA syntha 100.0 9.5E-44 2.1E-48 353.8 31.2 352 13-389 98-483 (511)
29 PLN00415 3-ketoacyl-CoA syntha 100.0 2.4E-42 5.2E-47 338.7 32.8 349 13-389 56-441 (466)
30 cd00827 init_cond_enzymes "ini 100.0 5.1E-43 1.1E-47 338.8 23.6 308 16-385 1-324 (324)
31 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 8.2E-41 1.8E-45 329.0 27.9 304 17-388 1-318 (379)
32 PLN02577 hydroxymethylglutaryl 100.0 5.4E-38 1.2E-42 311.2 24.9 306 15-389 3-372 (459)
33 PF00195 Chal_sti_synt_N: Chal 100.0 3E-38 6.4E-43 283.9 19.4 225 4-228 2-226 (226)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 8.3E-36 1.8E-40 282.6 21.8 308 15-389 1-312 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.5E-33 3.3E-38 279.2 22.4 307 16-389 1-375 (454)
36 cd00327 cond_enzymes Condensin 100.0 9.4E-30 2E-34 237.5 14.5 236 102-385 7-254 (254)
37 cd00825 decarbox_cond_enzymes 99.9 1.2E-27 2.6E-32 232.0 13.0 257 102-385 11-332 (332)
38 PF08392 FAE1_CUT1_RppA: FAE1/ 99.9 1.5E-24 3.3E-29 200.2 23.7 256 13-286 5-267 (290)
39 PF02797 Chal_sti_synt_C: Chal 99.9 6.7E-24 1.5E-28 180.7 16.8 150 239-388 1-150 (151)
40 PRK06147 3-oxoacyl-(acyl carri 99.9 3.3E-22 7E-27 194.9 18.6 316 15-393 3-348 (348)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.9 1.2E-21 2.6E-26 153.6 7.4 89 288-387 1-90 (90)
42 TIGR02845 spore_V_AD stage V s 99.8 1.7E-19 3.7E-24 168.9 19.4 244 101-379 49-307 (327)
43 PF01154 HMG_CoA_synt_N: Hydro 99.8 5.8E-20 1.3E-24 157.6 11.2 166 15-228 3-173 (174)
44 PRK08304 stage V sporulation p 99.8 5.5E-19 1.2E-23 165.9 18.3 244 101-379 55-314 (337)
45 cd00834 KAS_I_II Beta-ketoacyl 99.7 2E-16 4.4E-21 157.7 20.1 257 101-385 70-406 (406)
46 cd00751 thiolase Thiolase are 99.7 6.3E-16 1.4E-20 153.1 18.9 252 101-386 21-385 (386)
47 smart00825 PKS_KS Beta-ketoacy 99.7 1E-15 2.3E-20 153.5 19.0 262 101-386 86-422 (424)
48 PRK05656 acetyl-CoA acetyltran 99.7 1.1E-15 2.5E-20 151.3 18.3 95 101-196 25-120 (393)
49 PRK12404 stage V sporulation p 99.7 4.1E-15 8.8E-20 139.1 19.2 247 98-379 50-312 (334)
50 PRK09051 beta-ketothiolase; Pr 99.7 3.5E-15 7.5E-20 147.7 19.5 95 101-196 26-122 (394)
51 TIGR01930 AcCoA-C-Actrans acet 99.7 2.1E-15 4.6E-20 149.1 16.7 95 101-196 20-115 (386)
52 PRK07108 acetyl-CoA acetyltran 99.6 6E-15 1.3E-19 145.9 17.8 94 102-196 27-122 (392)
53 PRK06064 acetyl-CoA acetyltran 99.6 1.1E-14 2.4E-19 144.3 19.6 252 101-376 21-375 (389)
54 PRK08242 acetyl-CoA acetyltran 99.6 2.2E-14 4.8E-19 141.8 19.4 95 101-196 27-123 (402)
55 PRK05790 putative acyltransfer 99.6 2.7E-14 5.9E-19 141.7 19.4 254 101-387 25-392 (393)
56 KOG1393 Hydroxymethylglutaryl- 99.6 2.1E-14 4.5E-19 134.6 17.1 309 16-389 11-378 (462)
57 cd00829 SCP-x_thiolase Thiolas 99.6 3.9E-14 8.5E-19 139.9 20.3 232 101-353 15-343 (375)
58 PRK09052 acetyl-CoA acetyltran 99.6 2.6E-14 5.6E-19 141.6 17.9 95 101-196 30-127 (399)
59 TIGR03150 fabF beta-ketoacyl-a 99.6 3.4E-14 7.3E-19 141.8 18.4 258 101-386 70-407 (407)
60 PRK12578 acetyl-CoA acetyltran 99.6 8.2E-14 1.8E-18 138.0 20.8 233 101-353 20-349 (385)
61 PRK08235 acetyl-CoA acetyltran 99.6 2.9E-14 6.3E-19 141.1 17.5 95 101-196 25-120 (393)
62 cd00828 elong_cond_enzymes "el 99.6 4.7E-14 1E-18 140.8 19.0 256 101-385 71-407 (407)
63 PRK08313 acetyl-CoA acetyltran 99.6 1.4E-13 3E-18 136.2 20.8 256 101-383 23-378 (386)
64 PRK06205 acetyl-CoA acetyltran 99.6 6.4E-14 1.4E-18 139.3 18.1 95 101-196 25-120 (404)
65 PRK06501 3-oxoacyl-(acyl carri 99.6 1.2E-13 2.6E-18 138.4 18.1 260 102-389 75-424 (425)
66 PRK06954 acetyl-CoA acetyltran 99.6 8.7E-14 1.9E-18 138.0 16.8 95 101-196 30-125 (397)
67 PRK06059 lipid-transfer protei 99.5 2.7E-13 5.8E-18 134.9 19.0 92 102-195 23-116 (399)
68 cd00833 PKS polyketide synthas 99.5 1.2E-13 2.6E-18 138.3 16.4 224 101-351 86-359 (421)
69 PRK07314 3-oxoacyl-(acyl carri 99.5 3.1E-13 6.7E-18 135.1 18.7 262 102-387 72-409 (411)
70 PRK06445 acetyl-CoA acetyltran 99.5 3E-13 6.5E-18 134.2 17.8 252 101-387 31-393 (394)
71 PRK07661 acetyl-CoA acetyltran 99.5 4.5E-13 9.7E-18 132.5 18.0 95 101-196 26-122 (391)
72 PRK05952 3-oxoacyl-(acyl carri 99.5 1.3E-12 2.7E-17 128.8 20.7 250 105-386 59-380 (381)
73 PRK08722 3-oxoacyl-(acyl carri 99.5 3.7E-12 8.1E-17 127.1 23.7 258 102-387 74-413 (414)
74 PLN02787 3-oxoacyl-[acyl-carri 99.5 5E-12 1.1E-16 129.2 23.9 257 102-387 199-538 (540)
75 PRK07851 acetyl-CoA acetyltran 99.5 7.3E-13 1.6E-17 131.7 17.2 94 101-196 26-122 (406)
76 PLN02287 3-ketoacyl-CoA thiola 99.5 1.6E-12 3.4E-17 130.4 18.8 95 101-196 70-166 (452)
77 PRK07850 acetyl-CoA acetyltran 99.5 4.4E-12 9.5E-17 125.3 20.1 95 101-196 25-121 (387)
78 PRK06025 acetyl-CoA acetyltran 99.5 2.8E-12 6.1E-17 126.5 18.3 95 101-196 28-124 (417)
79 PRK07516 acetyl-CoA acetyltran 99.5 3.6E-12 7.7E-17 126.4 19.1 232 101-353 21-352 (389)
80 PRK06289 acetyl-CoA acetyltran 99.5 4.3E-12 9.3E-17 126.4 19.2 236 101-353 25-368 (403)
81 PRK06158 thiolase; Provisional 99.5 4.8E-12 1.1E-16 125.1 19.5 227 102-353 28-345 (384)
82 PRK07103 polyketide beta-ketoa 99.5 1.9E-12 4.1E-17 129.3 16.7 255 102-386 80-409 (410)
83 PRK06333 3-oxoacyl-(acyl carri 99.5 3.4E-12 7.4E-17 128.1 18.7 258 101-387 81-421 (424)
84 PRK08256 lipid-transfer protei 99.5 6.5E-12 1.4E-16 124.6 20.3 257 102-380 22-383 (391)
85 PRK06633 acetyl-CoA acetyltran 99.4 3.3E-12 7.1E-17 126.1 17.4 95 101-196 26-121 (392)
86 PRK06065 acetyl-CoA acetyltran 99.4 2.2E-11 4.9E-16 120.4 22.8 233 101-353 28-356 (392)
87 PTZ00050 3-oxoacyl-acyl carrie 99.4 4.7E-12 1E-16 126.9 18.1 263 101-387 76-420 (421)
88 PF08545 ACP_syn_III: 3-Oxoacy 99.4 2.5E-13 5.4E-18 103.7 6.4 66 158-229 1-66 (80)
89 PLN02644 acetyl-CoA C-acetyltr 99.4 6.5E-12 1.4E-16 124.6 18.2 254 101-387 24-392 (394)
90 PRK14691 3-oxoacyl-(acyl carri 99.4 1E-11 2.2E-16 120.6 18.3 256 102-387 4-339 (342)
91 PRK06690 acetyl-CoA acetyltran 99.4 5.3E-12 1.2E-16 123.2 16.1 223 102-353 25-336 (361)
92 PRK09185 3-oxoacyl-(acyl carri 99.4 3.3E-11 7.2E-16 119.7 21.8 213 139-388 138-391 (392)
93 PRK09116 3-oxoacyl-(acyl carri 99.4 1.9E-11 4.1E-16 121.7 19.5 252 102-386 73-405 (405)
94 PRK08963 fadI 3-ketoacyl-CoA t 99.4 2E-11 4.3E-16 122.3 19.4 95 101-196 28-123 (428)
95 PRK08439 3-oxoacyl-(acyl carri 99.4 2.7E-11 5.8E-16 120.9 20.2 254 102-387 72-405 (406)
96 PRK13359 beta-ketoadipyl CoA t 99.4 1.4E-11 3.1E-16 122.0 17.8 95 101-196 25-122 (400)
97 PRK06366 acetyl-CoA acetyltran 99.4 2.2E-11 4.7E-16 120.6 18.4 94 101-195 25-119 (388)
98 PLN02836 3-oxoacyl-[acyl-carri 99.4 2.1E-11 4.6E-16 122.7 18.6 259 102-388 93-436 (437)
99 PRK07910 3-oxoacyl-(acyl carri 99.4 8.9E-11 1.9E-15 117.3 22.9 259 102-387 83-417 (418)
100 TIGR02430 pcaF beta-ketoadipyl 99.4 1.4E-11 3E-16 122.1 16.8 95 101-196 24-121 (400)
101 PRK06504 acetyl-CoA acetyltran 99.4 4.8E-11 1E-15 118.0 19.8 95 101-196 25-121 (390)
102 PRK09050 beta-ketoadipyl CoA t 99.4 2.2E-11 4.8E-16 120.8 17.4 95 101-196 25-122 (401)
103 cd00832 CLF Chain-length facto 99.4 4.5E-11 9.8E-16 118.9 18.9 250 101-385 70-399 (399)
104 PRK06519 3-oxoacyl-(acyl carri 99.3 1.3E-10 2.8E-15 115.1 21.5 248 102-386 73-395 (398)
105 PRK08131 acetyl-CoA acetyltran 99.3 7E-11 1.5E-15 117.2 18.5 95 101-196 25-121 (401)
106 TIGR02446 FadI fatty oxidation 99.3 1E-10 2.2E-15 117.0 19.0 95 101-196 30-125 (430)
107 PRK07967 3-oxoacyl-(acyl carri 99.3 3.1E-10 6.7E-15 112.9 22.1 253 101-388 70-404 (406)
108 PRK07801 acetyl-CoA acetyltran 99.3 6.9E-11 1.5E-15 117.0 17.4 254 101-387 25-381 (382)
109 TIGR02445 fadA fatty oxidation 99.3 1.8E-10 3.8E-15 113.9 18.8 95 101-196 24-121 (385)
110 PRK06157 acetyl-CoA acetyltran 99.3 3.9E-10 8.5E-15 112.1 20.8 93 101-195 26-119 (398)
111 PF07451 SpoVAD: Stage V sporu 99.3 1.9E-10 4.2E-15 106.1 16.5 247 98-379 47-309 (329)
112 PRK08947 fadA 3-ketoacyl-CoA t 99.3 2.2E-10 4.9E-15 113.3 18.4 94 102-196 27-123 (387)
113 PRK06365 acetyl-CoA acetyltran 99.3 4.6E-10 1E-14 112.4 20.3 92 102-195 37-130 (430)
114 PRK08257 acetyl-CoA acetyltran 99.2 9.5E-10 2.1E-14 112.0 19.8 261 102-388 27-398 (498)
115 PRK06066 acetyl-CoA acetyltran 99.2 3E-09 6.5E-14 104.8 21.6 229 101-353 24-350 (385)
116 PRK08142 acetyl-CoA acetyltran 99.2 1.9E-09 4E-14 106.6 19.9 227 102-353 25-348 (388)
117 PRK08170 acetyl-CoA acetyltran 99.1 1.8E-10 4E-15 115.4 10.6 95 101-196 26-121 (426)
118 cd00826 nondecarbox_cond_enzym 99.1 2.5E-10 5.5E-15 113.2 10.2 94 101-196 22-117 (393)
119 TIGR02813 omega_3_PfaA polyket 99.1 3.5E-09 7.5E-14 124.2 21.1 221 140-388 185-462 (2582)
120 COG0304 FabB 3-oxoacyl-(acyl-c 99.1 2E-09 4.3E-14 106.3 15.4 264 95-387 64-410 (412)
121 PF00108 Thiolase_N: Thiolase, 99.1 5.6E-10 1.2E-14 104.8 9.7 95 101-196 25-120 (264)
122 PRK07855 lipid-transfer protei 99.0 1.5E-08 3.2E-13 100.3 18.9 85 102-191 24-108 (386)
123 KOG1390 Acetyl-CoA acetyltrans 98.9 9.1E-09 2E-13 95.2 8.8 93 102-195 30-123 (396)
124 PTZ00455 3-ketoacyl-CoA thiola 98.8 2.7E-08 5.9E-13 99.8 10.9 94 101-196 47-152 (438)
125 PRK07937 lipid-transfer protei 98.8 6.6E-07 1.4E-11 87.4 18.8 238 103-376 25-337 (352)
126 PF00109 ketoacyl-synt: Beta-k 98.7 7.3E-08 1.6E-12 89.8 11.3 125 100-227 85-251 (254)
127 PRK09268 acetyl-CoA acetyltran 98.7 1.4E-07 2.9E-12 94.6 10.6 95 101-196 30-125 (427)
128 KOG1394 3-oxoacyl-(acyl-carrie 98.6 9.9E-08 2.1E-12 89.8 8.4 211 101-341 93-368 (440)
129 COG3321 Polyketide synthase mo 98.6 3E-06 6.6E-11 93.6 20.8 264 103-389 92-428 (1061)
130 KOG1389 3-oxoacyl CoA thiolase 98.1 2.9E-05 6.3E-10 72.1 10.8 95 102-197 61-156 (435)
131 COG0183 PaaJ Acetyl-CoA acetyl 98.0 2.9E-05 6.4E-10 77.0 9.0 94 102-196 27-124 (392)
132 KOG1406 Peroxisomal 3-ketoacyl 97.7 5.1E-05 1.1E-09 69.0 4.8 91 102-196 29-119 (408)
133 KOG1391 Acetyl-CoA acetyltrans 97.1 0.00079 1.7E-08 61.2 5.2 95 101-196 27-123 (396)
134 PF08540 HMG_CoA_synt_C: Hydro 96.9 0.0036 7.7E-08 59.0 8.0 54 331-389 150-203 (282)
135 KOG1202 Animal-type fatty acid 96.8 0.0048 1E-07 66.8 8.8 260 102-391 87-419 (2376)
136 KOG1392 Acetyl-CoA acetyltrans 96.8 0.0012 2.5E-08 61.0 3.4 95 101-196 65-160 (465)
137 PF13723 Ketoacyl-synt_2: Beta 96.2 0.045 9.8E-07 49.7 10.0 114 102-229 34-172 (218)
138 PF02803 Thiolase_C: Thiolase, 95.7 0.021 4.5E-07 47.0 5.2 96 282-386 26-122 (123)
139 PRK08170 acetyl-CoA acetyltran 95.1 0.094 2E-06 52.8 8.6 119 210-353 261-398 (426)
140 PF08541 ACP_syn_III_C: 3-Oxoa 94.9 0.052 1.1E-06 41.8 4.9 74 114-192 1-78 (90)
141 PTZ00455 3-ketoacyl-CoA thiola 93.5 0.47 1E-05 48.0 9.7 71 281-353 312-401 (438)
142 PRK06816 3-oxoacyl-(acyl carri 93.0 0.52 1.1E-05 46.6 9.0 90 98-194 266-366 (378)
143 TIGR00748 HMG_CoA_syn_Arc hydr 92.3 0.37 8E-06 47.1 6.8 82 103-190 207-293 (345)
144 PRK09268 acetyl-CoA acetyltran 91.7 0.76 1.6E-05 46.3 8.4 96 282-386 313-426 (427)
145 PRK09258 3-oxoacyl-(acyl carri 91.1 0.75 1.6E-05 44.6 7.5 85 101-192 236-326 (338)
146 TIGR00747 fabH 3-oxoacyl-(acyl 91.0 0.67 1.4E-05 44.5 7.1 81 103-191 218-305 (318)
147 PF02801 Ketoacyl-synt_C: Beta 90.9 0.27 5.9E-06 40.1 3.6 73 279-353 26-106 (119)
148 PRK05963 3-oxoacyl-(acyl carri 90.9 0.72 1.6E-05 44.5 7.1 81 102-191 225-313 (326)
149 PRK07204 3-oxoacyl-(acyl carri 90.9 1.1 2.3E-05 43.3 8.4 82 101-190 227-315 (329)
150 PRK07515 3-oxoacyl-(acyl carri 89.8 1 2.2E-05 44.5 7.3 86 100-191 267-358 (372)
151 CHL00203 fabH 3-oxoacyl-acyl-c 89.7 1.4 2.9E-05 42.6 7.9 80 104-191 226-312 (326)
152 PRK12879 3-oxoacyl-(acyl carri 89.4 1.6 3.6E-05 41.9 8.3 81 103-191 224-311 (325)
153 PRK06840 hypothetical protein; 89.1 1.5 3.2E-05 42.6 7.7 81 104-191 237-322 (339)
154 PRK06025 acetyl-CoA acetyltran 89.1 1 2.2E-05 45.1 6.6 74 107-187 318-399 (417)
155 PLN02326 3-oxoacyl-[acyl-carri 88.6 1.2 2.7E-05 44.0 6.9 81 103-191 279-366 (379)
156 cd00830 KAS_III Ketoacyl-acyl 88.2 1.9 4.2E-05 41.2 7.9 82 102-191 221-309 (320)
157 PRK06147 3-oxoacyl-(acyl carri 87.1 1.4 3E-05 43.1 6.2 87 106-192 236-330 (348)
158 PRK09352 3-oxoacyl-(acyl carri 86.6 3 6.5E-05 39.9 8.1 81 103-191 218-305 (319)
159 cd00825 decarbox_cond_enzymes 86.4 3.1 6.7E-05 39.9 8.1 78 104-181 205-286 (332)
160 PF08392 FAE1_CUT1_RppA: FAE1/ 85.5 3.2 7E-05 39.2 7.3 84 277-374 84-172 (290)
161 PF00195 Chal_sti_synt_N: Chal 85.2 1.6 3.5E-05 39.8 5.1 89 274-376 98-191 (226)
162 PF02803 Thiolase_C: Thiolase, 85.2 4.9 0.00011 33.0 7.5 75 106-188 24-107 (123)
163 PRK04262 hypothetical protein; 84.4 3 6.5E-05 40.7 7.0 81 104-190 209-294 (347)
164 cd00327 cond_enzymes Condensin 84.0 4.9 0.00011 36.8 8.0 87 103-190 144-242 (254)
165 COG0332 FabH 3-oxoacyl-[acyl-c 82.9 3.3 7.1E-05 40.0 6.3 86 97-190 216-308 (323)
166 PRK06690 acetyl-CoA acetyltran 82.4 4.2 9.1E-05 40.0 7.1 78 105-187 259-342 (361)
167 cd00826 nondecarbox_cond_enzym 80.9 3.6 7.7E-05 41.0 6.1 71 281-353 272-361 (393)
168 PRK12880 3-oxoacyl-(acyl carri 78.6 6.6 0.00014 38.5 7.0 81 102-190 240-324 (353)
169 PRK09052 acetyl-CoA acetyltran 78.2 5.3 0.00011 39.9 6.3 78 105-187 298-381 (399)
170 PRK08242 acetyl-CoA acetyltran 78.1 7.3 0.00016 38.9 7.3 77 107-188 303-385 (402)
171 PRK09051 beta-ketothiolase; Pr 77.6 6.4 0.00014 39.2 6.7 77 106-187 294-376 (394)
172 PF02801 Ketoacyl-synt_C: Beta 77.4 1.5 3.3E-05 35.6 1.8 77 104-181 25-110 (119)
173 PRK08257 acetyl-CoA acetyltran 76.4 9.6 0.00021 39.2 7.8 81 106-190 294-382 (498)
174 COG0304 FabB 3-oxoacyl-(acyl-c 76.4 6 0.00013 39.6 6.1 45 105-149 277-322 (412)
175 PLN03173 chalcone synthase; Pr 76.2 10 0.00022 37.8 7.6 86 275-374 101-191 (391)
176 PRK09050 beta-ketoadipyl CoA t 76.1 6.4 0.00014 39.3 6.3 77 106-188 299-384 (401)
177 PLN03168 chalcone synthase; Pr 74.8 10 0.00023 37.6 7.4 86 275-374 100-190 (389)
178 PLN03172 chalcone synthase fam 74.8 9.7 0.00021 37.9 7.1 86 275-374 101-191 (393)
179 cd00827 init_cond_enzymes "ini 74.3 11 0.00024 36.0 7.3 88 99-193 218-315 (324)
180 PLN02377 3-ketoacyl-CoA syntha 74.0 11 0.00023 38.9 7.2 69 275-350 171-244 (502)
181 PLN03170 chalcone synthase; Pr 73.7 16 0.00035 36.5 8.4 85 275-373 105-194 (401)
182 PLN02192 3-ketoacyl-CoA syntha 73.7 10 0.00023 38.9 7.1 85 275-373 175-264 (511)
183 PLN02287 3-ketoacyl-CoA thiola 73.0 8.5 0.00019 39.1 6.3 98 106-229 333-437 (452)
184 PLN02787 3-oxoacyl-[acyl-carri 72.9 6.1 0.00013 41.1 5.3 45 106-150 407-452 (540)
185 PLN02932 3-ketoacyl-CoA syntha 72.8 11 0.00024 38.5 7.0 70 276-352 148-222 (478)
186 PRK06519 3-oxoacyl-(acyl carri 72.5 11 0.00025 37.5 7.0 45 105-150 281-326 (398)
187 cd00831 CHS_like Chalcone and 72.2 18 0.00039 35.3 8.3 69 276-351 85-158 (361)
188 PRK06445 acetyl-CoA acetyltran 71.7 17 0.00037 36.1 8.1 78 106-188 294-377 (394)
189 TIGR02430 pcaF beta-ketoadipyl 71.5 7.9 0.00017 38.6 5.6 78 106-188 298-383 (400)
190 PRK07661 acetyl-CoA acetyltran 71.1 9.5 0.00021 38.0 6.0 79 105-188 290-374 (391)
191 PRK05790 putative acyltransfer 70.7 12 0.00027 37.1 6.8 79 106-189 293-377 (393)
192 PRK06205 acetyl-CoA acetyltran 70.6 12 0.00025 37.5 6.6 78 106-188 300-386 (404)
193 PRK07910 3-oxoacyl-(acyl carri 70.0 7.5 0.00016 39.0 5.1 46 105-150 287-333 (418)
194 PRK05656 acetyl-CoA acetyltran 69.8 14 0.00031 36.7 7.0 42 107-152 294-335 (393)
195 PRK13359 beta-ketoadipyl CoA t 69.4 11 0.00023 37.7 6.0 77 106-188 298-383 (400)
196 PRK07314 3-oxoacyl-(acyl carri 69.1 7.6 0.00016 38.7 4.9 45 106-150 278-323 (411)
197 PLN00415 3-ketoacyl-CoA syntha 68.5 11 0.00023 38.4 5.7 80 280-373 138-222 (466)
198 PRK06064 acetyl-CoA acetyltran 68.4 18 0.0004 35.8 7.5 42 106-151 260-301 (389)
199 PRK08235 acetyl-CoA acetyltran 68.4 12 0.00026 37.2 6.2 78 105-187 292-375 (393)
200 PRK12404 stage V sporulation p 67.4 46 0.001 32.1 9.5 73 269-351 46-122 (334)
201 PRK07851 acetyl-CoA acetyltran 67.4 11 0.00024 37.7 5.7 78 106-188 305-388 (406)
202 TIGR03150 fabF beta-ketoacyl-a 66.1 8.9 0.00019 38.0 4.8 45 106-150 277-322 (407)
203 PRK09116 3-oxoacyl-(acyl carri 65.3 12 0.00026 37.3 5.5 45 105-149 276-321 (405)
204 PRK08722 3-oxoacyl-(acyl carri 65.2 12 0.00026 37.5 5.5 45 105-149 279-324 (414)
205 PLN02854 3-ketoacyl-CoA syntha 65.1 19 0.00042 37.2 6.9 69 277-352 189-262 (521)
206 cd00834 KAS_I_II Beta-ketoacyl 64.7 15 0.00032 36.4 6.0 78 104-181 275-358 (406)
207 TIGR01930 AcCoA-C-Actrans acet 64.5 21 0.00045 35.4 7.0 42 106-151 288-329 (386)
208 PLN03169 chalcone synthase fam 64.4 34 0.00073 34.1 8.4 86 102-190 279-374 (391)
209 PRK07850 acetyl-CoA acetyltran 64.3 28 0.00061 34.6 7.8 80 105-189 286-371 (387)
210 PRK05952 3-oxoacyl-(acyl carri 64.3 12 0.00027 37.0 5.3 46 104-149 254-300 (381)
211 PLN03171 chalcone synthase-lik 64.0 27 0.00058 34.9 7.7 70 276-352 108-182 (399)
212 PRK09585 anmK anhydro-N-acetyl 63.5 24 0.00051 34.8 7.0 71 100-171 67-148 (365)
213 cd00751 thiolase Thiolase are 62.4 34 0.00074 33.8 8.1 80 279-373 25-110 (386)
214 PRK07516 acetyl-CoA acetyltran 61.7 20 0.00044 35.5 6.3 44 105-152 261-304 (389)
215 PRK06954 acetyl-CoA acetyltran 61.5 18 0.00038 36.1 5.9 72 106-181 297-374 (397)
216 PRK06158 thiolase; Provisional 61.1 26 0.00057 34.7 7.0 78 279-372 31-110 (384)
217 COG3424 BcsA Predicted naringe 60.9 37 0.0008 32.5 7.3 77 273-353 73-154 (356)
218 PRK08304 stage V sporulation p 60.7 55 0.0012 31.7 8.7 79 278-375 58-139 (337)
219 PRK06504 acetyl-CoA acetyltran 60.6 42 0.00092 33.3 8.3 45 105-153 289-333 (390)
220 PRK06333 3-oxoacyl-(acyl carri 59.1 15 0.00032 36.8 4.9 46 104-149 288-334 (424)
221 PRK08256 lipid-transfer protei 59.0 35 0.00075 33.9 7.4 44 106-153 266-309 (391)
222 TIGR02445 fadA fatty oxidation 58.7 44 0.00095 33.1 8.1 41 106-150 282-322 (385)
223 TIGR02845 spore_V_AD stage V s 58.6 82 0.0018 30.5 9.4 43 278-321 52-97 (327)
224 COG3425 PksG 3-hydroxy-3-methy 57.6 82 0.0018 31.1 9.4 83 102-190 207-296 (377)
225 PRK06366 acetyl-CoA acetyltran 57.5 31 0.00066 34.3 6.7 81 278-373 28-114 (388)
226 cd00832 CLF Chain-length facto 57.4 25 0.00054 35.0 6.1 47 104-150 270-317 (399)
227 PRK07801 acetyl-CoA acetyltran 56.7 37 0.00079 33.6 7.1 70 107-180 283-358 (382)
228 PRK06365 acetyl-CoA acetyltran 56.7 31 0.00068 34.8 6.7 81 279-375 40-127 (430)
229 PRK14691 3-oxoacyl-(acyl carri 56.6 27 0.00058 34.1 6.0 48 103-150 205-253 (342)
230 PRK08947 fadA 3-ketoacyl-CoA t 56.1 47 0.001 32.9 7.8 78 106-188 284-370 (387)
231 cd00828 elong_cond_enzymes "el 55.2 23 0.00051 35.1 5.6 46 104-149 274-320 (407)
232 TIGR01835 HMG-CoA-S_prok 3-hyd 55.2 46 0.00099 32.9 7.5 49 102-151 203-252 (379)
233 KOG1394 3-oxoacyl-(acyl-carrie 53.8 9.8 0.00021 37.0 2.4 47 104-150 301-348 (440)
234 PRK00768 nadE NAD synthetase; 52.3 2.1E+02 0.0045 26.9 11.4 31 139-171 90-120 (268)
235 PRK12578 acetyl-CoA acetyltran 52.2 33 0.00071 33.9 6.0 80 280-375 25-110 (385)
236 PRK06501 3-oxoacyl-(acyl carri 51.2 30 0.00065 34.8 5.6 44 106-149 291-335 (425)
237 PRK09185 3-oxoacyl-(acyl carri 50.9 30 0.00065 34.3 5.5 76 106-181 262-340 (392)
238 cd00829 SCP-x_thiolase Thiolas 50.5 20 0.00043 35.2 4.1 44 105-152 252-295 (375)
239 TIGR01991 HscA Fe-S protein as 49.5 1.3E+02 0.0029 31.7 10.3 51 100-151 289-339 (599)
240 PRK08142 acetyl-CoA acetyltran 49.5 55 0.0012 32.5 7.0 82 278-375 27-110 (388)
241 PRK07937 lipid-transfer protei 49.3 85 0.0018 30.7 8.3 76 108-190 250-334 (352)
242 PRK08131 acetyl-CoA acetyltran 49.2 47 0.001 33.2 6.5 81 279-374 29-116 (401)
243 smart00825 PKS_KS Beta-ketoacy 48.8 45 0.00097 33.2 6.4 47 104-150 279-326 (424)
244 PTZ00050 3-oxoacyl-acyl carrie 48.2 45 0.00096 33.5 6.3 47 104-150 283-331 (421)
245 PLN02836 3-oxoacyl-[acyl-carri 47.3 41 0.00088 34.0 5.9 46 104-149 299-345 (437)
246 PLN02644 acetyl-CoA C-acetyltr 46.7 51 0.0011 32.7 6.4 81 278-373 27-113 (394)
247 TIGR03285 methan_mark_14 putat 46.5 33 0.00072 33.4 4.6 34 99-132 62-95 (445)
248 PRK06059 lipid-transfer protei 46.1 67 0.0015 31.9 7.2 81 279-375 26-113 (399)
249 PRK05183 hscA chaperone protei 45.6 1.5E+02 0.0033 31.4 10.0 49 102-151 307-355 (616)
250 cd00833 PKS polyketide synthas 45.3 52 0.0011 32.6 6.3 27 103-129 278-304 (421)
251 PRK06289 acetyl-CoA acetyltran 43.3 29 0.00063 34.6 4.1 43 106-152 278-320 (403)
252 PRK07855 lipid-transfer protei 42.6 82 0.0018 31.2 7.1 82 278-374 26-108 (386)
253 PRK06157 acetyl-CoA acetyltran 42.0 74 0.0016 31.7 6.7 82 278-375 29-116 (398)
254 PRK08963 fadI 3-ketoacyl-CoA t 41.9 81 0.0018 31.8 7.0 45 279-324 32-82 (428)
255 PRK14878 UGMP family protein; 41.3 56 0.0012 31.5 5.6 46 106-151 48-98 (323)
256 PRK07108 acetyl-CoA acetyltran 40.2 90 0.002 31.0 7.0 82 279-375 30-118 (392)
257 KOG1406 Peroxisomal 3-ketoacyl 39.7 37 0.00081 31.6 3.7 33 101-133 269-301 (408)
258 KOG2707 Predicted metalloprote 39.0 52 0.0011 32.1 4.7 45 107-151 87-136 (405)
259 PRK13410 molecular chaperone D 38.2 1.4E+02 0.003 32.1 8.4 53 98-151 303-355 (668)
260 PRK09604 UGMP family protein; 37.8 78 0.0017 30.7 6.0 50 102-151 51-105 (332)
261 PRK06633 acetyl-CoA acetyltran 37.8 93 0.002 31.0 6.6 46 280-326 31-82 (392)
262 COG0533 QRI7 Metal-dependent p 36.5 94 0.002 30.2 6.1 79 105-195 53-139 (342)
263 CHL00094 dnaK heat shock prote 35.3 1.6E+02 0.0034 31.3 8.2 58 93-151 298-355 (621)
264 PTZ00186 heat shock 70 kDa pre 35.2 1.9E+02 0.0042 30.9 8.9 50 101-151 331-380 (657)
265 PF00814 Peptidase_M22: Glycop 33.6 36 0.00077 31.9 2.8 49 103-151 30-83 (268)
266 TIGR00329 gcp_kae1 metallohydr 33.5 76 0.0016 30.3 5.1 50 102-151 48-102 (305)
267 PF09887 DUF2114: Uncharacteri 33.2 80 0.0017 31.0 5.0 34 99-132 64-98 (448)
268 PF03702 UPF0075: Uncharacteri 32.4 58 0.0013 32.1 4.1 52 101-152 65-126 (364)
269 TIGR03725 bact_YeaZ universal 32.4 74 0.0016 28.3 4.5 33 102-134 33-65 (202)
270 PLN03184 chloroplast Hsp70; Pr 32.1 1.8E+02 0.004 31.2 8.2 56 95-151 337-392 (673)
271 PRK13411 molecular chaperone D 31.1 1.9E+02 0.0042 30.9 8.1 49 101-150 305-353 (653)
272 TIGR01796 CM_mono_aroH monofun 30.6 1.5E+02 0.0032 24.1 5.4 43 109-154 25-70 (117)
273 PRK06065 acetyl-CoA acetyltran 30.4 1.5E+02 0.0032 29.5 6.7 81 279-375 32-119 (392)
274 PRK00290 dnaK molecular chaper 28.6 2.5E+02 0.0054 29.8 8.4 54 97-151 300-353 (627)
275 COG0443 DnaK Molecular chapero 28.4 2.5E+02 0.0055 29.5 8.3 72 102-178 288-359 (579)
276 PTZ00009 heat shock 70 kDa pro 28.4 2.5E+02 0.0055 30.0 8.4 45 106-151 315-359 (653)
277 KOG2708 Predicted metalloprote 28.3 95 0.0021 28.4 4.3 81 107-194 54-136 (336)
278 PF11212 DUF2999: Protein of u 28.0 12 0.00026 27.2 -1.0 41 286-327 6-48 (82)
279 PRK08313 acetyl-CoA acetyltran 27.8 88 0.0019 31.0 4.6 45 104-152 255-301 (386)
280 TIGR03722 arch_KAE1 universal 27.8 73 0.0016 30.7 3.9 46 106-151 49-99 (322)
281 TIGR02177 PorB_KorB 2-oxoacid: 27.6 2.9E+02 0.0064 26.2 7.8 72 105-195 11-83 (287)
282 COG1214 Inactive homolog of me 27.0 1E+02 0.0023 27.9 4.6 50 102-151 37-91 (220)
283 PF01135 PCMT: Protein-L-isoas 26.8 60 0.0013 29.2 2.9 41 335-382 49-89 (209)
284 PF12244 DUF3606: Protein of u 26.7 52 0.0011 22.9 2.0 29 308-339 20-48 (57)
285 TIGR02350 prok_dnaK chaperone 26.6 2.4E+02 0.0052 29.7 7.8 55 95-150 296-350 (595)
286 PRK07103 polyketide beta-ketoa 26.5 39 0.00084 33.8 1.8 23 107-129 284-306 (410)
287 PRK09605 bifunctional UGMP fam 26.2 1.1E+02 0.0025 31.6 5.3 50 101-151 48-102 (535)
288 PF00108 Thiolase_N: Thiolase, 25.4 1.1E+02 0.0024 28.5 4.6 82 278-374 28-115 (264)
289 COG0013 AlaS Alanyl-tRNA synth 24.9 58 0.0013 35.8 2.8 51 289-342 116-172 (879)
290 COG3053 CitC Citrate lyase syn 24.6 5.2E+02 0.011 24.8 8.5 72 53-148 242-313 (352)
291 COG0241 HisB Histidinol phosph 24.3 1.4E+02 0.0029 26.4 4.5 50 277-327 69-127 (181)
292 TIGR02813 omega_3_PfaA polyket 24.1 1.2E+02 0.0026 38.0 5.5 76 106-181 317-401 (2582)
293 PTZ00400 DnaK-type molecular c 24.1 2.1E+02 0.0046 30.6 6.9 49 102-151 346-394 (663)
294 PRK06066 acetyl-CoA acetyltran 23.9 1.1E+02 0.0023 30.4 4.4 42 107-152 259-302 (385)
295 PRK08439 3-oxoacyl-(acyl carri 23.6 1.8E+02 0.004 28.9 6.0 45 104-150 274-319 (406)
296 TIGR02446 FadI fatty oxidation 23.4 2.6E+02 0.0056 28.2 7.0 45 279-324 34-84 (430)
297 PF07736 CM_1: Chorismate muta 23.3 2.1E+02 0.0045 23.3 5.0 44 108-154 24-70 (118)
298 PRK12613 galactose-6-phosphate 23.2 97 0.0021 26.1 3.3 20 358-382 53-72 (141)
299 COG4065 Uncharacterized protei 23.1 1.9E+02 0.0041 27.8 5.4 41 99-139 94-137 (480)
300 PF11392 DUF2877: Protein of u 22.6 1.6E+02 0.0036 23.4 4.4 46 306-351 64-109 (110)
301 COG3473 Maleate cis-trans isom 22.5 4.8E+02 0.01 23.7 7.5 45 102-149 49-95 (238)
302 PF07451 SpoVAD: Stage V sporu 22.5 2.8E+02 0.0061 26.7 6.5 75 269-353 43-121 (329)
303 TIGR03723 bact_gcp putative gl 22.0 1.5E+02 0.0033 28.4 4.9 50 102-151 49-103 (314)
304 COG3737 Uncharacterized conser 22.0 3E+02 0.0065 22.5 5.6 60 102-168 52-112 (127)
305 TIGR01118 lacA galactose-6-pho 21.7 71 0.0015 26.9 2.2 28 346-382 46-73 (141)
306 PRK08621 galactose-6-phosphate 21.1 74 0.0016 26.8 2.2 28 346-382 46-73 (142)
307 PF06089 Asparaginase_II: L-as 21.0 2.3E+02 0.0049 27.5 5.7 66 102-178 77-143 (324)
308 PF02502 LacAB_rpiB: Ribose/Ga 20.8 71 0.0015 26.8 2.0 29 345-382 46-74 (140)
309 PRK05571 ribose-5-phosphate is 20.7 71 0.0015 27.1 2.0 28 346-382 49-76 (148)
310 COG4126 Hydantoin racemase [Am 20.7 6.5E+02 0.014 23.0 8.3 61 102-181 158-218 (230)
311 KOG1391 Acetyl-CoA acetyltrans 20.4 1.1E+02 0.0025 28.4 3.4 59 282-342 297-356 (396)
312 TIGR00689 rpiB_lacA_lacB sugar 20.2 78 0.0017 26.7 2.1 28 346-382 46-73 (144)
313 PRK00035 hemH ferrochelatase; 20.2 5.5E+02 0.012 24.6 8.4 93 102-195 168-274 (333)
314 PF07736 CM_1: Chorismate muta 20.1 1.5E+02 0.0033 24.1 3.7 34 271-305 13-47 (118)
No 1
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.2e-62 Score=481.52 Aligned_cols=381 Identities=67% Similarity=1.124 Sum_probs=328.9
Q ss_pred ccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcC
Q 016111 6 DGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICA 85 (395)
Q Consensus 6 ~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~ 85 (395)
+-++.....++++|.|+|+.+|++.++|+++.+.+.+..+.++.+.+++++.+|++++||++||+..+++.+...+++.+
T Consensus 6 ~~~~~~~~~~~~~I~~igta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~ 85 (393)
T PLN03172 6 EIRKAQRAEGPATILAIGKATPANCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCA 85 (393)
T ss_pred cccccCCCCCCeEEEEEEecCCCccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccc
Confidence 34455567788999999999999999999999998766544444566666788999999999999987655544555555
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccch
Q 016111 86 YDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCY 165 (395)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~ 165 (395)
++.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||+
T Consensus 86 ~~~p~~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~ 165 (393)
T PLN03172 86 YMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCF 165 (393)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchH
Confidence 67889999999999999999999999999999999999999999999996699999999999999987544688999999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee
Q 016111 166 IGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ 245 (395)
Q Consensus 166 ~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 245 (395)
|++.||++|..++++++.++||||++|.+|..+.++.+.+.++..+..+|||||+|+||++++..+. ..+.+++.+..+
T Consensus 166 g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~-~~~~~~i~~~~~ 244 (393)
T PLN03172 166 AGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKI-ERPLFEIVSAAQ 244 (393)
T ss_pred HHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcc-cCceeEEeeecc
Confidence 9999999999999999999999999999996566665533445567899999999999998665322 224578888777
Q ss_pred eecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 246 TILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 246 ~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
.++|.+++.+.|.+...|+.+.+.+++++++.+.+++.++++|+++|++. .|+ +|++||+|+++++.++++||+++++
T Consensus 245 ~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~~~gl~~-~di~~~~~Hqgg~~Il~~v~~~Lgl~~~~ 323 (393)
T PLN03172 245 TILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFAPIGIND-WNSIFWIAHPGGPAILDQVEIKLDLKEEK 323 (393)
T ss_pred EEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhhhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHH
Confidence 78899988888988888887888899999999999999999999999996 888 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+..+|+++++||||+|+++|++|++++++..++|++++|.+.+++++++||+|+||++++|||.
T Consensus 324 ~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~ 387 (393)
T PLN03172 324 LRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLTVETVVLHSV 387 (393)
T ss_pred HHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcceeeeeeeEec
Confidence 9998999999999999999999999885322337777774447899999999999999999995
No 2
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=2.5e-62 Score=482.77 Aligned_cols=381 Identities=64% Similarity=1.124 Sum_probs=327.7
Q ss_pred ccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCC
Q 016111 8 KNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYD 87 (395)
Q Consensus 8 ~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~ 87 (395)
++.....++.+|.|+|+.+|++.++++++.+.+.+....++.+..++++.+|++++||++||+..+++.+..++++.+++
T Consensus 12 ~~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~ 91 (401)
T PLN03170 12 RKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYM 91 (401)
T ss_pred ccCCCCCCCeEEEEEeecCCCccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccC
Confidence 44455667899999999999999999999999877654434455666788899999999999998765544455555667
Q ss_pred CCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhH
Q 016111 88 GSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIG 167 (395)
Q Consensus 88 ~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~ 167 (395)
.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||+|+
T Consensus 92 ~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~ 171 (401)
T PLN03170 92 APSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAG 171 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcChhHHH
Confidence 88999999999999999999999999999999999999999999999779999999999999998865589999999999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
+.||++|..++++++.++||||++|.+|..+.+|.+.+++++.+..+|||||+|+||++++..++ ..+.+++.+..+.+
T Consensus 172 ~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~-~~~~~~l~~~~~~~ 250 (401)
T PLN03170 172 GTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERV-ERPLFQLVSASQTI 250 (401)
T ss_pred HHHHHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccc-cCCceEEeeccceE
Confidence 99999999999999999999999999998665565433456667889999999999998765322 12346777776667
Q ss_pred cCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+|.+++.+.|.+.+.|+.+.+++++++.+.+.++++++++|+++|++. +|+ +|++||+|+++++.+.++||++++++.
T Consensus 251 ~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~-~di~~~v~Hqgg~~il~~v~~~Lgl~~~~~~ 329 (401)
T PLN03170 251 LPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITD-YNSIFWVAHPGGPAILDQVEAKVGLEKERMR 329 (401)
T ss_pred ecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEecCCcHHHHHHHHHHcCCChHHHH
Confidence 887777777888888887888999999999999999999999999997 888 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
.+|+++++||||+|+++|++|++++++..++|++++|++.|++++++||+|++|++++|||.+.
T Consensus 330 ~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~~~~ll~~~~~ 393 (401)
T PLN03170 330 ATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTVETVVLHSVPI 393 (401)
T ss_pred HHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhHHhHHheeccc
Confidence 8889999999999999999999998532223778887444789999999999999999999554
No 3
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=9.7e-64 Score=471.87 Aligned_cols=314 Identities=23% Similarity=0.331 Sum_probs=272.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.|+|.|+|+++++|+++... +.+++ +||.+++||++||++.++|.
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~---~~tsd---------ewI~~rtGir~R~~a~~~e~------------------ 51 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKR---VDTSD---------EWIETRTGIRERRIAADDET------------------ 51 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhc---cCCCc---------ceeeeecCCceeeecCCCcc------------------
Confidence 4688999999999999999999855 45555 89999999999999988773
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
.++|+++|+++||+++|++|+|||+||++|+|| +.+|++|+.||++||+.... +||++.+|+||++||.+
T Consensus 52 -------~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~~~--afDl~aaCsgf~yaL~~ 122 (323)
T COG0332 52 -------TSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGGAP--AFDLQAACSGFLYALSV 122 (323)
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCCcc--eeechhhhHHHHHHHHH
Confidence 899999999999999999999999999999999 78999999999999999864 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC-CCCCCCCCceEEEeeeee----ec
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP-DTTLSEKPLFQIVSGAQT----IL 248 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~-~~~~~~~~~~~~~~~~~~----~~ 248 (395)
|.++|++|.+++||||++|++|. +.|+ .++.+..+|||||+|+||++.+ +.++ ..+.+.+++.. ..
T Consensus 123 A~~~i~sG~~k~vLVVg~e~~S~-~ld~-----~dR~t~vlFgDGAgAvvl~~~~~~~~i---~~~~l~sdg~~~~~l~~ 193 (323)
T COG0332 123 ADGLIRSGGYKNVLVVGAETLSR-ILDW-----TDRDTCVLFGDGAGAVVLEATEDDNGI---LDTDLGSDGSQGDLLYL 193 (323)
T ss_pred HHHHHHcCCCCEEEEEehhHhhc-cCCH-----hhccceEEEcCCceEEEEecCCCCcCe---eeeeeeccccCCCeeec
Confidence 99999999999999999999997 4554 4556899999999999999987 4443 23444444322 11
Q ss_pred CCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 249 PGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+.+.... .........+.| |+++|+++++.++++++++|+++|+++ +|| +|+|||+|.++++.++++||+|++|+.
T Consensus 194 ~~~~~~~-~~~~~~~~~~~m~Gr~vfk~av~~~~~~~~~~L~~~~l~~-~dId~~vpHQan~ri~~~i~~~l~~~~~k~~ 271 (323)
T COG0332 194 PGGGSAT-PKEESGGGLLVMDGREVFKFAVRAMPKAIEEVLEKAGLTP-EDIDWFVPHQANLRIIEAIAKKLGIPEEKVV 271 (323)
T ss_pred cCCCCcc-ccccccccceeeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEccccccHHHHHHHHHHcCCCHHHHh
Confidence 2221111 000011124566 999999999999999999999999998 999 999999999999999999999999998
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
. ++++|||+++||+|++|++++++ |++++| |+++|++||+|++||++++||.
T Consensus 272 ~---~~~~yGNtsaAsiplaL~~~~~~----g~ik~G---d~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 272 V---TVDKYGNTSAASIPLALDEALRE----GRIKPG---DLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred h---HHHHhcccccchHHHHHHHHhhh----CCCCCC---CEEEEEeecCcceeeeEEEEeC
Confidence 8 59999999999999999999998 999999 9999999999999999999984
No 4
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=8.4e-62 Score=477.07 Aligned_cols=385 Identities=65% Similarity=1.093 Sum_probs=329.2
Q ss_pred cccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCc
Q 016111 5 KDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNIC 84 (395)
Q Consensus 5 ~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~ 84 (395)
-+.++...+.++++|.++|+.+|++.++++++.+.+.+...+++.+..++++.+|++++||++||+..+++.+...+.+.
T Consensus 5 ~~~~~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~ 84 (391)
T PLN03173 5 DEIRKAQRAEGPATIMAIGTSTPPNCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVC 84 (391)
T ss_pred cccccCCCCCCCeEEEEEEccCCCcccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccc
Confidence 34555567778899999999999999999999999876653333455666678899999999999998766444456666
Q ss_pred CCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccc
Q 016111 85 AYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGC 164 (395)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C 164 (395)
+++.|++++|++.|.+...+|+++|+++||+++|++++|||+||++|+|++..|+.+.+|+++||+++.+.+++++++||
T Consensus 85 ~~~~p~~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC 164 (391)
T PLN03173 85 EYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGC 164 (391)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCcc
Confidence 66778999999999999999999999999999999999999999999999668999999999999998764578999999
Q ss_pred hhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeee
Q 016111 165 YIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGA 244 (395)
Q Consensus 165 ~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~ 244 (395)
+|++.||++|..++++++.++||||++|.+|..|+++.+.++++..+..+|||||+|+||+.++..++ ..+.+++.+..
T Consensus 165 ~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~-~~~~~~l~~~~ 243 (391)
T PLN03173 165 FAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGV-EKPLFELVSAA 243 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCc-CCcceEEEeee
Confidence 99999999999999999999999999999996566665533444567899999999999998654332 22357888777
Q ss_pred eeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016111 245 QTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ 323 (395)
Q Consensus 245 ~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e 323 (395)
+.++|.+++.+.|.+...|+.+.+.+++++.+.+.++++++++|+++|++. +|+ +|++||+|+++++.++++||++++
T Consensus 244 ~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~~gl~~-~di~~~v~Hqgg~~Il~~v~~~LgL~~e 322 (391)
T PLN03173 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISD-WNSLFWIAHPGGPAILDQVEAKLALKPE 322 (391)
T ss_pred eEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHhcCCCc-cccCeEEECCCcHHHHHHHHHHcCCChH
Confidence 778899988888888888877778899999999999999999999999997 888 999999999999999999999999
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
|+..+|.++++||||+|+|+|++|++++++..+.+.+++|.+.+++++++||+|+|+++++|+|. .|+
T Consensus 323 kl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t~e~~ll~~~-~~~ 390 (391)
T PLN03173 323 KLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLTVETVVLHSV-APT 390 (391)
T ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHHHHHHHHhhc-cCC
Confidence 99998999999999999999999999996422224444443337899999999999999999994 365
No 5
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.2e-61 Score=476.43 Aligned_cols=378 Identities=51% Similarity=0.879 Sum_probs=320.0
Q ss_pred cccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCC
Q 016111 9 NQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDG 88 (395)
Q Consensus 9 ~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~ 88 (395)
+.+...++++|.++|+.+|++.++++++.+.+.+...+++.+..++++.+|++++||++||+..+++.+...+++.++..
T Consensus 8 ~~~~~~~~~~i~~i~ta~P~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ 87 (389)
T PLN03168 8 GQPRAEGPACVLGIGTAVPPAEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYME 87 (389)
T ss_pred CCCCCCCCeEEEEEeccCCCcccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccC
Confidence 34566788999999999999999999999998776543344556667888999999999999987665555666666678
Q ss_pred CChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHH
Q 016111 89 SSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 89 ~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~ 168 (395)
|++++|+++|.+...+|+.+|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++++||+|++
T Consensus 88 ps~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~ 167 (389)
T PLN03168 88 PSLNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGA 167 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHH
Confidence 99999999999999999999999999999999999999999999997789999999999999987656899999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeec
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL 248 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~ 248 (395)
.||++|+.++++++.++||||++|.+|..+.++.+.+.+++.+..+|||||+|+||++++.... ....+++....+.++
T Consensus 168 ~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~-~~~~~~~~~~~~~~~ 246 (389)
T PLN03168 168 SVLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEV-EKALFEVHWAGETIL 246 (389)
T ss_pred HHHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCcc-CCcceEEEeeeeEEE
Confidence 9999999999999999999999999998665443322445567899999999999998654321 123467766666678
Q ss_pred CCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 249 PGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
|.+.+.+.|.+.+.|+.+.+.+++++.+.+.++++++++|+..|+.. .|+ +|++||+|++|++.++++||++++|+..
T Consensus 247 p~s~~~~~~~~~~~g~~~~l~~~vp~~i~~~~~~~l~~~l~~~~~~~-~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~ 325 (389)
T PLN03168 247 PESDGAIDGHLTEAGLIFHLMKDVPGLISKNIEKFLNEARKCVGSPD-WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQG 325 (389)
T ss_pred cCCCCccCceEecCceEEEECHHHHHHHHHHHHHHHHHHHHhcCCCc-cccceEEecCCcHHHHHHHHHHcCCCHHHHHH
Confidence 98877778888888877777789999999999999999999999876 555 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+|+++++||||+|+|+|+.|++++++..+.|....|.+.|++++++||+|++|++++|||.
T Consensus 326 s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~~~g~~~~ll~afGpG~t~~~~llr~~ 386 (389)
T PLN03168 326 SRDILSEFGNMSSASVLFVLDQIRQRSVKMGASTLGEGSEFGFFIGFGPGLTLEVLVLRAA 386 (389)
T ss_pred HHHHHHHhCccHhhhHHHHHHHHHHHHhhcCCCCCCCCccEEEEEEEcchhhhhhhhheec
Confidence 8999999999999999999999876422222100011238999999999999999999994
No 6
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3.3e-60 Score=467.35 Aligned_cols=365 Identities=40% Similarity=0.731 Sum_probs=307.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.|+|+++|+++++|+++.+.+....... .+.++++.++|++++||++||++.+++.+...+.+.....|++++|
T Consensus 20 ~~~~I~gigt~~P~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~~~r 98 (391)
T PLN03169 20 GKATILALGKAFPSQLVPQEYLVDGYFRDTKCD-DPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPTIKQR 98 (391)
T ss_pred CCeEEEEEEeeCCCeecCHHHHHHHHHHHhccc-CHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCCHHHH
Confidence 368999999999999999999998654422111 2445666788999999999999975443334455555567899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.|.+.+.+|+++|+++||+++|++++|||+||++|++.+..|+.+.+|+++||+++.+.+++++++||+|+++||.+|
T Consensus 99 ~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A 178 (391)
T PLN03169 99 LDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVA 178 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999778899999999999999887544799999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
.+++++++.++||||++|.++..+..+....+.++.+..+|||||+|+||++++.... ....+++...+...+|.+.+.
T Consensus 179 ~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~-~~~~~~l~~~~~~~ip~~~~~ 257 (391)
T PLN03169 179 KDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVS-ESPFFELHTAIQQFLPGTEKT 257 (391)
T ss_pred HHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCccc-CCcceEEEeeeeeEcCCCccc
Confidence 9999999999999999999887554332222446677899999999999998664210 112466666666677877666
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCC--CCceEEEEcCCChHHHHHHHHHcCCCccchhHHHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKD--WNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVL 332 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~--~~di~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~ 332 (395)
+.|.+.++|+.+.+++++++++.+.++++++++|+++|++. +++++|++||+|++|++.++++||+|++|+..+|.++
T Consensus 258 ~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l 337 (391)
T PLN03169 258 IDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRAL 337 (391)
T ss_pred cCceecCCceEEEECcHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 66777777877778999999999999999999999999984 1344789999999999999999999999999888899
Q ss_pred HhcCCCccchHHHHHHHHHHhhhhcCCcc---CCCCCceEEEEEEccchhhhheeeeec
Q 016111 333 SEYGNMGGVSVFFILDEIRRKSAEEGKVT---TGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~~~~~g~i~---~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++||||+|+|+|++|++++++ ++++ +| |++++++||+|++|++++|||.
T Consensus 338 ~~~GNtsSasip~~L~~~~~~----~~~~~~~~g---d~~ll~afG~G~s~~~~ll~~~ 389 (391)
T PLN03169 338 MDYGNVSSNTIVYVLEYMREE----LKKKGEEDE---EWGLILAFGPGITFEGILARNL 389 (391)
T ss_pred HHhCCchHhHHHHHHHHHHHh----hcccCCCCC---cEEEEEEEcccHhHHHHHHhhh
Confidence 999999999999999999876 6665 57 9999999999999999999984
No 7
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=1.5e-58 Score=456.29 Aligned_cols=373 Identities=50% Similarity=0.876 Sum_probs=303.0
Q ss_pred CCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCCh
Q 016111 12 QGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSL 91 (395)
Q Consensus 12 ~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~ 91 (395)
.++++++|.|+|+|+|+++++|+++.+.+.+....+..++.+++++||++++||++||++.+++.+...+.+.....|++
T Consensus 18 ~~~~~~~I~gigt~~P~~~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~~ 97 (399)
T PLN03171 18 RADGLAAVLAIGTANPANCVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPSL 97 (399)
T ss_pred CCCCCcEEEEEEeeCCCcccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCCH
Confidence 45577999999999999999999999886433222322445666789999999999999987643334455555567899
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHH
Q 016111 92 DSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 92 ~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL 171 (395)
++|+++|.+.+.+|+++|+++||+++|++++|||+||++|+|++..|+++.+|+++||+++.+.+++++.+||+|++.||
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL 177 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAAL 177 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999995589999999999999976533567778999999999
Q ss_pred HHHHHHHHcCCCCeEEEEEeeccccccCCCCCCC-chhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCC
Q 016111 172 RMAKDFAENNPGARVLVVCSDLSLGTFRGPSDAN-LGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPG 250 (395)
Q Consensus 172 ~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~-~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~ 250 (395)
++|.+++++++.++||||++|.+|..+ ++.+.+ +.+.....+|||||+|+||++.+... ....+++........|.
T Consensus 178 ~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~--~~~~~~l~~~~~~~~p~ 254 (399)
T PLN03171 178 RLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAA--ERPLFEIVSAAQAIIPE 254 (399)
T ss_pred HHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCC--CCCceEEEEeeeEEecC
Confidence 999999999999999999999999754 333322 23334468999999999999866421 01246776665566787
Q ss_pred CcCccceEEecCceEEEeC-chhHHHHHHHHHHHHHHhhcc-----CCCCCCCceEEEEcCCChHHHHHHHHHcCCCccc
Q 016111 251 SDSDVAGQFREMGLTVHLS-KNVATVVSENIEKCLDEAFSP-----FGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 251 ~~~~~~~~~~~~g~~~~~~-~~v~~~~~~~~~~~i~~~L~~-----~gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
+.+.+.|.....|+.+.+. +.+++.+.+.+.++++++|++ .|++. +|+.|++||+|.+|++.+.++||++++|
T Consensus 255 ~~~~~~~~~~~~g~~~~~~~~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~-~di~~~~Hq~~~~il~~v~~~Lgl~~ek 333 (399)
T PLN03171 255 SDDAINMHFTEGGLDGNIGTRQVPGLIGDNIERCLLDAFAPLLGGDGGAEW-NDLFWAVHPGSSAILDQVDAALGLEPEK 333 (399)
T ss_pred CchheEEEEEcCCceEEECchhHHHHHHHHHHHHHHHHHHhhcccccCCCc-ccceEEEcCCcHHHHHHHHHHcCCCHHH
Confidence 7666777666666666664 778877777677777666553 57776 8886668999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCC--ccCCCCCceEEEEEEccchhhhheeeeecCCCC
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK--VTTGEGLEWGVMFGIGAGVTVDTVVLRSFPFPT 392 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~--i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~~~ 392 (395)
+..+|.++++||||+|+|+|++|++++++ ++ +++|.+.|++++++||+|++|++++|+|.+.|.
T Consensus 334 ~~~s~~~l~~yGNtssaSip~~L~~~~~~----~~~~~~~G~~~d~vll~~fG~Glt~~~~ll~~~~~~~ 399 (399)
T PLN03171 334 LAASRRVLSDYGNMFGATVIFALDELRRQ----MEEAAAAGAWPELGVMMAFGPGLTVDAMLLHASGHPA 399 (399)
T ss_pred hHHHHHHHHHhCcchhhhHHHHHHHHHhh----HhhcCCCCCCcceEEEEEEcccHHHHHHHhhcccCCC
Confidence 99888899999999999999999999876 42 456532379999999999999999999998874
No 8
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=4.4e-55 Score=429.17 Aligned_cols=355 Identities=40% Similarity=0.661 Sum_probs=294.0
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeec--chhhhcCCCCcCCCCCChhH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVT--EDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~--~~~~~~~~~~~~~~~~~~~~ 93 (395)
.++|.|+|+|+|+++++|+++.+.+.........+..+++.+||.+++||++||++.+ ++.. .......+..++
T Consensus 1 ~~~I~~~~~~~P~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~----~~~~~~~~~~~~ 76 (361)
T cd00831 1 AATILAIGTAVPPHRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETY----APRPEMSPSLDE 76 (361)
T ss_pred CcEEEEEEEeCCCCcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhc----CCccccCCCcCc
Confidence 3689999999999999999999987432211111334556789999999999999987 3310 000113467889
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~~aL~ 172 (395)
++..+.+.+.+|+.+|+++||+++|+++++||+||++|++++..|+++.+|+++||+++.. ++++++ ++|+|++.||+
T Consensus 77 ~~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~-~~~dv~~~~C~~~~~al~ 155 (361)
T cd00831 77 RNDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDV-KRYNLGGMGCSAGAIALD 155 (361)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCccc-chhccccccchhHHHHHH
Confidence 9999999999999999999999999999999999999999888999999999999998643 389998 89999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCc
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSD 252 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 252 (395)
+|.+++++++.++||||++|.+|..+ ++.+ ++....+.++|||||+|+||++++.........+++.+.....+|.+.
T Consensus 156 ~A~~~~~~~~~~~aLvv~~e~~s~~~-~~~d-~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (361)
T cd00831 156 LAKDLLEANPGARVLVVSTELCSLWY-RGPD-HRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSE 233 (361)
T ss_pred HHHHHHHHCCCCEEEEEEeeccccee-CCCC-cHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCC
Confidence 99999999999999999999999744 3433 133334678999999999999876532001123555554445567665
Q ss_pred CccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccC--CCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHH
Q 016111 253 SDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPF--GIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~--gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~ 329 (395)
+.+.|.+...++.+.+++++++.+.+.++++++++|+++ |++. +|| +|++||+|.++++.+++.||++++|+..+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L~~~~~g~~~-~did~~~~H~~~~~i~~~v~~~lgl~~~~~~~s~ 312 (361)
T cd00831 234 DAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLLARLGIGLFK-LAFDHWCVHPGGRAVLDAVEKALGLSPEDLEASR 312 (361)
T ss_pred CceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHhccccCCCcc-ccceEEEECCCChHHHHHHHHHcCCCHHHHHHHH
Confidence 555566555666777788999999999999999999999 9997 999 999999999999999999999999998777
Q ss_pred HHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 330 ~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
.++++||||+++|+|++|++++++ |++++| |+|++++||+|++|+++++
T Consensus 313 ~~l~~~GN~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 313 MVLRRYGNMSSSSVLYVLAYMEAK----GRVKRG---DRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred HHHHHhCCchhccHHHHHHHHHHh----CCCCCC---CEEEEEEEcCCceeeeeeC
Confidence 799999999999999999999998 889999 9999999999999999885
No 9
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-53 Score=412.40 Aligned_cols=318 Identities=19% Similarity=0.270 Sum_probs=258.3
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.|+|+|+|+++++|+++.+.. ...+ ....+++.+.+||++||++.+++
T Consensus 5 ~~~~~I~~~g~~lP~~~v~~~~~~~~~---~~~~-----~~~~~~i~~~~Gi~~R~~~~~~e------------------ 58 (353)
T PRK12880 5 FDKAKISGICVSVPEHKICIDDELESV---FSND-----IKTLKRMKKVIGLNTRYICDENT------------------ 58 (353)
T ss_pred ccccEEEEEEEECCCeEecHHHHHHHh---cCcc-----hhhhhhhhhccCceEEEeCCCCC------------------
Confidence 456899999999999999999764442 1111 01236688889999999997766
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
.+.+|+++|+++||+++|++++|||+||++|++| +..|+++.+|+++||+++.+ .++|++.+|+|++.||+
T Consensus 59 -------~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~-~~~di~~~C~g~~~aL~ 130 (353)
T PRK12880 59 -------CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKT-IAFDLGQACAGYLYGLF 130 (353)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc-eEEehhhhhHHHHHHHH
Confidence 3899999999999999999999999999999998 89999999999999998654 38999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eec
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~ 248 (395)
+|.+++++|+.+ +|||++|.+|.. .+|.+ +....+|||||+|+||++++... ..+++.+.+. ..+
T Consensus 131 ~A~~~i~~~~~~-~LVv~~e~~S~~-~~~~d-----~~~~~lFGDGAaA~vl~~~~~~~----~~~~~~~~~~~~~~~~~ 199 (353)
T PRK12880 131 VAHSLIQSGLGK-ILLICGDTLSKF-IHPKN-----MNLAPIFGDGVSATLIEKTDFNE----AFFELGSDGKYFDKLII 199 (353)
T ss_pred HHHHHHHcCCCC-EEEEEehhhhcc-CCccc-----CCceeeecccceEEEEEecCCCC----ceEEEEecCCCCCeEEe
Confidence 999999999888 999999999974 45543 23478999999999999755421 1244444332 234
Q ss_pred CCCcCc-cceEEe-------c----CceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHH
Q 016111 249 PGSDSD-VAGQFR-------E----MGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQI 314 (395)
Q Consensus 249 p~~~~~-~~~~~~-------~----~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i 314 (395)
|.+... ..+... . ....+.+ |+.+++++.+.++++++++|+++|++. +|+ +|++||+|.++++.+
T Consensus 200 p~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~did~~v~HQ~~~~i~~~i 278 (353)
T PRK12880 200 PKGAMRIPKADIFNDDSLMQTEEFRQLENLYMDGANIFNMALECEPKSFKEILEFSKVDE-KDIAFHLFHQSNAYLVDCI 278 (353)
T ss_pred cCCCcCCCccccccccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHH
Confidence 443221 111110 0 0113455 899999999999999999999999997 999 999999999999999
Q ss_pred HHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecCC
Q 016111 315 EAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFPF 390 (395)
Q Consensus 315 ~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~~ 390 (395)
+++||+|++|++.. ++++|||+++||+|++|++.++. ++ -+++|++||+|++||+++|||.++
T Consensus 279 ~~~Lgl~~ek~~~~--~l~~~GNtssasip~~L~~~~~~----~~-------~~~ll~~~G~G~s~g~~ll~~~~~ 341 (353)
T PRK12880 279 KEELKLNDDKVPNF--IMEKYANLSACSLPALLCELDTP----KE-------FKASLSAFGAGLSWGSAVLNFKDL 341 (353)
T ss_pred HHHhCCCHHHhhhh--hHHhhCCHHHHHHHHHHHHHHHc----CC-------cEEEEEEEchhhhheEeEEEECCc
Confidence 99999999998642 58999999999999999999875 43 469999999999999999999654
No 10
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=7.8e-53 Score=407.85 Aligned_cols=312 Identities=19% Similarity=0.243 Sum_probs=257.8
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~e-------------------- 50 (326)
T PRK05963 3 SSRIAGFGHAVPDRRVENAEIEAQLG---LE---------TGWIERRTGIRCRRWAAPDE-------------------- 50 (326)
T ss_pred ccEEEEEEEECCCCeecHHHHHHHcC---CC---------HHHhhhccCCeEEEEcCCCC--------------------
Confidence 57899999999999999999988752 22 26789999999999997766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+++|+++||+++|+++++||+||++|++| +..|+.+.+|+++||+++.. +++++++|+|++.||++|
T Consensus 51 -----~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~~~--~~di~~~C~g~~~aL~~A 123 (326)
T PRK05963 51 -----TLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQNSG--AIDLAGACAGFLYALVLA 123 (326)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCCCc--eeeccchhhHHHHHHHHH
Confidence 3899999999999999999999999999999999 78999999999999998764 899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC--CCCCCCceEEEeeee----eec
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT--TLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~--~~~~~~~~~~~~~~~----~~~ 248 (395)
.++++++ .+++|||++|.++.. .++. ++.+.++|||||+|+||++++.. ++ ....+.+.+. ..+
T Consensus 124 ~~~l~~~-~~~aLVv~~d~~s~~-~~~~-----~~~~~~lfGDgA~A~ll~~~~~~~~~~---l~~~~~t~~~~~~~~~~ 193 (326)
T PRK05963 124 DGFVRAQ-GKPVLVVAANILSRR-INMA-----ERASAVLFADAAGAVVLAPSAKANSGV---LGSQLISDGSHYDLIKI 193 (326)
T ss_pred HHHHHcC-CCeEEEEEechhhcc-CCcc-----ccCceEEEeecceEEEEEecCCCCCce---EEEEEEEcCCCCCeEEe
Confidence 9999997 599999999998863 3443 23357899999999999987643 21 0122222211 112
Q ss_pred CCCcCccce--EEecCceEEE--eCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc
Q 016111 249 PGSDSDVAG--QFREMGLTVH--LSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ 323 (395)
Q Consensus 249 p~~~~~~~~--~~~~~g~~~~--~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e 323 (395)
|.+.....+ ........+. .++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+.++||+|++
T Consensus 194 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~~l~l~~~ 272 (326)
T PRK05963 194 PAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRMMSGASQNVLASAAMTP-QDIDRFFPHQANARIVDKVCETIGIPRA 272 (326)
T ss_pred CCCCcCCCCcccccccccceEecCCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCCHH
Confidence 222111000 0011111233 2688898889999999999999999997 999 999999999999999999999999
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
|+.. ++++|||+++||+|++|++++++ +++++| |+|+++++|+|++|++++|||
T Consensus 273 k~~~---~l~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 273 KAAS---TLETYGNSSAATIPLSLSLANLE----QPLREG---ERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred Hhhh---hHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEehhhhheeeEEeC
Confidence 9875 59999999999999999999987 889999 999999999999999999997
No 11
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-51 Score=372.75 Aligned_cols=350 Identities=27% Similarity=0.490 Sum_probs=308.4
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHH-hcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICE-KSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
..|.|+++++|++.++|.|+.+.+..+...+ + .+.+.+.+. +.+|++|++..|.+. ....+++.++|
T Consensus 2 a~i~sv~t~~Ppy~~~Qse~~d~f~~~~~~~---~-~~~I~r~l~~~~~i~~R~~v~Pl~~--------y~e~~~f~ekN 69 (356)
T COG3424 2 AVIASVATALPPYRYNQSEITDSFAELPFQE---G-REDIPRVLHANAQINRRHLVLPLDW--------YREPHGFGEKN 69 (356)
T ss_pred ceeeecccCCCccccchHHHHHHHHHhcccc---c-hHHHHHHHhhccccccceecccHhh--------ccCCCChhhhh
Confidence 4799999999999999999988876543222 2 333455554 778999999998763 12246789999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.|.|.+..|+++|.++||+.+++.|+|||+|+++|+|+...|++..+|..+||+++.+.|.-....||++++.+|..|+
T Consensus 70 ~ifie~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~ 149 (356)
T COG3424 70 EIFIEEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARAR 149 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCc
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
.++++.|..+|||||.|.||.+|. +.++...+.+...+||||++|+|++.+... +. ......+....++++|.+++.
T Consensus 150 ~y~ra~P~~~vlvV~vELCSLt~~-~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~-~~~~p~i~~s~StL~~dse~~ 227 (356)
T COG3424 150 DYCRAAPDANVLVVCVELCSLTYV-FADDTKSNLVGTALFGDGAAAVVVSGDRRAEGK-RPLRPDILDSFSTLYPDSEDI 227 (356)
T ss_pred HHHhhCccceEEEEEeeeeeeeee-cCCCCcccceeeeeecCCeeEEEEecccccccc-CCCCceecccccccCCccccc
Confidence 999999999999999999997765 333334577888999999999999986542 21 122456677777889999999
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLS 333 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~ 333 (395)
+.|.+.++|+...++++++..+-.++...+..+|+.++++. +|| .|+.|++++++++++.+.||+++++...+|+.++
T Consensus 228 Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~~~~ls~-~dI~~w~~HPGG~KVida~~~sLgls~e~l~~s~~~L~ 306 (356)
T COG3424 228 MGWDVGDQGLKVVLSRDLPNLIESYLAPNVTTFLATHGLSI-EDIEAWVVHPGGPKVIDAYEESLGLSPEALELSWDVLR 306 (356)
T ss_pred cceeecCCcEEEEEcCchhHHHHHHhhhhHHHHHHHcCCch-hhhceeeeCCCCchHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999997 999 9999999999999999999999999999999999
Q ss_pred hcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 334 EYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 334 ~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+|||++|+++++.|.+.+++ . .++| +++++.++|+||+...++++|.+
T Consensus 307 ~~GNMSSatvLfVL~d~l~~----~-~~~g---~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 307 EYGNMSSATVLFVLEDTLQK----A-PKSG---SRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HhCCccchhhHHHHHHHHHh----c-CCCC---cceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999997 3 6788 89999999999999999999986
No 12
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8e-52 Score=401.30 Aligned_cols=316 Identities=21% Similarity=0.242 Sum_probs=258.9
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.++|+|+|+++++|+++.+.++ .. .+|+.+++||++||++. ++
T Consensus 2 ~~~~~I~~~g~~lP~~~v~~~~~~~~~~---~~---------~~~i~~~~Gi~~R~~~~-~~------------------ 50 (329)
T PRK07204 2 KRYISIKGIGTYLPKRKVDSLELDKKLD---LP---------EGWVLKKSGVKTRHFVD-GE------------------ 50 (329)
T ss_pred CCCcEEEEEEEeCCCceecHHHHHHhhC---CC---------HhHhhhccCceEEeecC-CC------------------
Confidence 4568999999999999999999988742 12 26788999999999997 44
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
+..+|+.+|++++|+++|++++|||+||++++++ +..|+.+.+|+++||+++...++++++.+|+|++.||.
T Consensus 51 -------~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~ 123 (329)
T PRK07204 51 -------TSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTCLSFITALD 123 (329)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchhHHHHHHHH
Confidence 2899999999999999999999999999999998 67899999999999998631138999999999999999
Q ss_pred HHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----ee
Q 016111 173 MAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TI 247 (395)
Q Consensus 173 ~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~ 247 (395)
+|.+++++|..++||||++|.++..+ ++. +..+.++|||||+|+||++++.. ++ ....+.+.+. ..
T Consensus 124 ~a~~~l~~g~~~~~Lvv~~e~~s~~~-~~~-----~~~~~~lfGDGAaA~ll~~~~~~~~i---l~~~~~t~~~~~~~~~ 194 (329)
T PRK07204 124 TISYAIECGRYKRVLIISSEISSVGL-NWG-----QNESCILFGDGAAAVVITKGDHSSRI---LASHMETYSSGAHLSE 194 (329)
T ss_pred HHHHHHHCCCCCEEEEEEeccccCCC-Ccc-----cCcceEEEecccEEEEEEEcCCCCcE---EEEEEEEecCCCCceE
Confidence 99999999999999999999988633 332 22246899999999999987653 21 0111211110 01
Q ss_pred cCCCcCc----cceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016111 248 LPGSDSD----VAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLK 321 (395)
Q Consensus 248 ~p~~~~~----~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~ 321 (395)
+|..... ..+.....++.+.+ ++++++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~H~~~~~~~~~i~~~l~l~ 273 (329)
T PRK07204 195 IRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYLMKFIDKLLMDAGYTL-ADIDLIVPHQASGPAMRLIRKKLGVD 273 (329)
T ss_pred EecCCcCCCCcccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEeCCCCHHHHHHHHHHcCCC
Confidence 1111100 00111122334555 789999999999999999999999997 999 9999999999999999999999
Q ss_pred ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 322 ~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++.. ++++||||+++|+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 274 ~e~~~~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 274 EERFVT---IFEDHGNMIAASIPVALFEAIKQ----KKVQRG---NKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHHhhh---hHhhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhheeeEEeC
Confidence 999775 69999999999999999999998 889999 999999999999999999986
No 13
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=7.4e-52 Score=407.97 Aligned_cols=315 Identities=23% Similarity=0.331 Sum_probs=259.0
Q ss_pred CCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhH
Q 016111 14 GGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 14 ~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
..+++|.|+|+|+|+++++|+++.+.++ .. .+|+.+++||++||++.+++.
T Consensus 45 ~~~~~I~g~g~~lP~~~v~n~el~~~~~---~~---------~~~i~~~tGi~~R~~~~~~~~----------------- 95 (379)
T PLN02326 45 GSGSKLVGCGSAVPKLLITNDDLSKLVD---TS---------DEWIATRTGIRNRRVLSGDET----------------- 95 (379)
T ss_pred cCCcEEEEEEEECCCceecHHHHHHhcC---Cc---------hhheecccCcceEeecCCCCC-----------------
Confidence 3578999999999999999999988752 11 267899999999999977663
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
..+|+.+|+++||+++|++++|||+||++++++...++.+..|+++||+++.. +++++++|+|++.||.+
T Consensus 96 --------~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~~~--~~dv~~~Ca~~~~aL~~ 165 (379)
T PLN02326 96 --------LTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTNAL--AFDLTAACSGFVLGLVT 165 (379)
T ss_pred --------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCCCc--eeeccccchHHHHHHHH
Confidence 89999999999999999999999999999998844456789999999998654 89999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC--CCCCCCceEEEeeee--ee--
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT--TLSEKPLFQIVSGAQ--TI-- 247 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~--~~~~~~~~~~~~~~~--~~-- 247 (395)
|.++|++|..++||||++|.++. +.++. ++....+|||||+|+||++++.. ++ ..+.+.+.+. ..
T Consensus 166 A~~~l~~g~~~~vLVv~~e~~s~-~~~~~-----d~~~~~lfGDGAaAvlL~~~~~~~~~i---~~~~~~t~g~~~~~~~ 236 (379)
T PLN02326 166 AARFIRGGGYKNVLVIGADALSR-YVDWT-----DRGTCILFGDGAGAVVLQACDDDEDGL---LGFDMHSDGNGHKHLH 236 (379)
T ss_pred HHHHHHcCCCCEEEEEEechhcC-CCCcc-----ccCceEEEcceeEEEEEEEcCCCCCce---EEEEEEEcCCCCCeEE
Confidence 99999999999999999999986 44443 22346799999999999987642 21 1233333221 00
Q ss_pred c--CCCc---------CccceEEecCce-EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH
Q 016111 248 L--PGSD---------SDVAGQFREMGL-TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 248 ~--p~~~---------~~~~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
. +... ....+.....++ .+.+ |+++++++.+.++++++++|+++|++. +|| +|++||+|.++++.
T Consensus 237 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~ 315 (379)
T PLN02326 237 ATFKGEDDDSSGGNTNGVGDFPPKKASYSCIQMNGKEVFKFAVRCVPQVIESALQKAGLTA-ESIDWLLLHQANQRIIDA 315 (379)
T ss_pred ecCCCCcccccccccccccccccccccccceEecCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHH
Confidence 1 1110 000011111122 2455 789999999999999999999999997 999 99999999999999
Q ss_pred HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 314 IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 314 i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||++++|+.. ++++||||++||+|++|++++++ |++++| |+||+++||+|++|++++++|
T Consensus 316 ~~~~Lgl~~ek~~~---~l~~~GNt~sAsi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 316 VAQRLGIPPEKVIS---NLANYGNTSAASIPLALDEAVRS----GKVKKG---DVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHcCCCHHHeee---cHhhcCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEChhheeeEEEEEC
Confidence 99999999999876 48999999999999999999998 889999 999999999999999999997
No 14
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=3.2e-51 Score=396.45 Aligned_cols=314 Identities=24% Similarity=0.322 Sum_probs=256.3
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.|+|+|+|+++++|+|+++.++ .. ..+|.+++||++||++.+++
T Consensus 2 ~v~I~~~g~~lP~~~v~~~e~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~-------------------- 49 (326)
T CHL00203 2 GVHILSTGSSVPNFSVENQQFEDIIE---TS---------DHWISTRTGIKKRHLAPSST-------------------- 49 (326)
T ss_pred ccEEEEEEEECCCeEEcHHHHHHhcC---CC---------hhhEeeccCeEEEEeCCCCC--------------------
Confidence 57899999999999999999998752 22 15788999999999987766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+..+|+.+|++++|+++|+++++||.||++++++...+..+..++++||+.+.+ +++++++|+|++.||.+|.
T Consensus 50 -----~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~~~--~~~v~~~Casg~~al~~A~ 122 (326)
T CHL00203 50 -----SLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATRAV--AFDITAACSGFILALVTAT 122 (326)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCCCc--eeeecccchhHHHHHHHHH
Confidence 389999999999999999999999999999988843345678999999998764 7999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee----eecCCC
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ----TILPGS 251 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~----~~~p~~ 251 (395)
++|++|..+++|||++|.+|.. .++.+ +...++|||||+|+||++.+..++ ..+.+.+.+. ..++..
T Consensus 123 ~~i~sg~~~~~Lvv~~e~~s~~-~~~~~-----~~~~~~fgDga~A~ll~~~~~~~~---~~~~~~t~g~~~~~~~~~~~ 193 (326)
T CHL00203 123 QFIQNGSYKNILVVGADTLSKW-IDWSD-----RKTCILFGDGAGAAIIGASYENSI---LGFKLCTDGKLNSHLQLMNK 193 (326)
T ss_pred HHHHcCCCCEEEEEEehhhhCc-CCccc-----CCceEEEcceeeEEEEEEcCCCCe---EEEEEEEcCCCcceEEecCC
Confidence 9999999999999999999973 34442 234689999999999998665332 1222222221 011110
Q ss_pred c--C-ccceEEecCc--eEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccc
Q 016111 252 D--S-DVAGQFREMG--LTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 252 ~--~-~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~ 324 (395)
. . .......+++ ..+.+ ++++++++.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~hq~~~~~~~~~~~~lgl~~~k 272 (326)
T CHL00203 194 PVNNQSFGTTKLPQGQYQSISMNGKEVYKFAVFQVPAVIIKCLNALNISI-DEVDWFILHQANKRILEAIANRLSVPNSK 272 (326)
T ss_pred CCCcccccccccccCCcceEEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHH
Confidence 0 0 0000000111 12344 788888888889999999999999997 999 9999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 325 LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 325 ~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+.. ++++|||++||++|++|+++++. |++++| |+|+++++|+|++|+++++||.
T Consensus 273 ~~~---~l~~~Gn~~sasi~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~v~~~~ 326 (326)
T CHL00203 273 MIT---NLEKYGNTSAASIPLALDEAIQN----NKIQPG---QIIVLSGFGAGLTWGAIVLKWK 326 (326)
T ss_pred hhh---HHHhhCcHHHHHHHHHHHHHHHh----CCCCCC---CEEEEEEEchhhhheEEEEEeC
Confidence 975 69999999999999999999998 889999 9999999999999999999995
No 15
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=2.3e-50 Score=390.45 Aligned_cols=315 Identities=19% Similarity=0.274 Sum_probs=258.6
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++++|+.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~~~I~~ig~~~P~~~v~~~e~~~~~~---~~---------~~~i~~~~Gi~~r~~~~~~~------------------- 51 (325)
T PRK12879 3 SYARITGIGTYVPPRVLTNDDLETFID---TS---------DEWIVQRTGIKERRIAHVEE------------------- 51 (325)
T ss_pred CCCEEEEEEEECCCcEEcHHHHHHhcC---CC---------HHHhhhccCceEEEECCCCC-------------------
Confidence 468999999999999999999988642 11 26788999999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|++++|+++|+++++||+||++++++ +..|+.+.+|++.||+++.+ +++++++|+|++.||.+
T Consensus 52 ------~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~~~--~~~v~~~C~~~~~al~~ 123 (325)
T PRK12879 52 ------YTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPNAA--AFDINAACAGFLYGLET 123 (325)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCCCc--EEEECccchHHHHHHHH
Confidence 3899999999999999999999999999999987 78899999999999998754 79999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eec
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TIL 248 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~ 248 (395)
|.++|++|..++||||++|.++. +.++.+ +...++|||||+|+||++++.. ++ ....+.+.+. ...
T Consensus 124 A~~~l~~g~~~~~Lvv~~e~~s~-~~~~~~-----~~~~~~~GDgAaA~ll~~~~~~~~~---~~~~~~~~~~~~~~~~~ 194 (325)
T PRK12879 124 ANGLITSGLYKKVLVIGAERLSK-VTDYTD-----RTTCILFGDGAGAVVLEATENEPGF---IDYVLGTDGDGGDILYR 194 (325)
T ss_pred HHHHHHcCCCCEEEEEEehhhcC-cCCccc-----cCceEEEeecceEEEEEecCCCCCe---EEEEEEEcCCCCCeEEE
Confidence 99999999999999999999886 333322 2346899999999999997753 21 0111111110 011
Q ss_pred CCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 249 PGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 249 p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
+.............+..+.+ ++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|.+|+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g~~~-~did~~~~h~~~~~~~~~~~~~lg~~~~~~~ 273 (325)
T PRK12879 195 TGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPKGARQVLEKAGLTK-DDIDWVIPHQANLRIIESLCEKLGIPMEKTL 273 (325)
T ss_pred cCCCCCCCccccccCccEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHhh
Confidence 11111010000111223444 688999888999999999999999997 999 999999999999999999999999987
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
. ++++|||++++|+|++|++++++ |++++| |+++++++|+|++|+++++||+
T Consensus 274 ~---~~~~~Gn~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~~~~~~l~~~~ 325 (325)
T PRK12879 274 V---SVEYYGNTSAATIPLALDLALEQ----GKIKPG---DTLLLYGFGAGLTWAALLVKWG 325 (325)
T ss_pred h---hHhhhCchHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhhhhEEEEEEeC
Confidence 6 58999999999999999999987 889999 9999999999999999999994
No 16
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=5.6e-50 Score=389.81 Aligned_cols=322 Identities=16% Similarity=0.171 Sum_probs=257.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.|+|+|+|+++++|+++.+.+.+...... ...+++.+.+||++||+..+++
T Consensus 4 ~~v~I~~~g~~lP~~~v~~~~~~~~~~~~~~~~~-----~~~~~i~~~~Gi~~R~~~~~~~------------------- 59 (338)
T PRK09258 4 SNVAILSLAYELAPVVVTSSEIEERLAPLYERLR-----LPPGQLEALTGIRERRWWPEGT------------------- 59 (338)
T ss_pred cceEEEEEEecCCCccCcHHHHHHHhhhcccccC-----CChhHhhhhcCceeEecCCCCC-------------------
Confidence 4689999999999999999999987543211000 0125678889999999986654
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
++.+|+.+|++++|+++|+++++||+||++|+++ +..|+++.+|+++||+++.. ++++++++|+|++.||++
T Consensus 60 ------~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~-~~~~v~~~C~~~~~al~~ 132 (338)
T PRK09258 60 ------QLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSC-ANFDVSNACLGFLNGMLD 132 (338)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCC-ceeehhhhhHHHHHHHHH
Confidence 3899999999999999999999999999999987 78899999999999998643 379999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCC------CCC----chhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEee
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPS------DAN----LGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSG 243 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~------~~~----~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~ 243 (395)
|.++|++|..++||||++|.++..+ ++. +.. ........+|||||+|+||++.+.... ..++...
T Consensus 133 A~~~i~~g~~~~~Lvv~~e~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~----~~~~~~~ 207 (338)
T PRK09258 133 AANMIELGQIDYALVVSGESAREIV-EATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR----GHRLLGG 207 (338)
T ss_pred HHHHHHcCCCCEEEEEEecccchhc-cchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC----cceeeee
Confidence 9999999999999999999988632 221 100 111123578999999999998654210 1233222
Q ss_pred eeeecCCCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCC
Q 016111 244 AQTILPGSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLK 321 (395)
Q Consensus 244 ~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~ 321 (395)
.....+...+...|. ...+.+ ++.+++...+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|
T Consensus 208 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~-~did~~i~H~~~~~~~~~~~~~lgl~ 282 (338)
T PRK09258 208 VTRAATEHHELCQGG----RDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWAV-EQVDRVICHQVGAAHTRAILKALGID 282 (338)
T ss_pred eeecCCCcccccccC----ccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEecCCCCHHHHHHHHHHhCCC
Confidence 211122221111111 112333 677888888888899999999999997 999 9999999999999999999999
Q ss_pred ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 322 QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 322 ~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++|++. ++++||||+++|+|++|++++++ |++++| |+|+++++|+|++|+++++||
T Consensus 283 ~~k~~~---~~~~~GN~~sas~~~~L~~~~~~----g~~~~G---d~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 283 PEKVFT---TFPTLGNMGPASLPITLAMAAEE----GFLKPG---DRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred HHHcee---hHhhhCCcHHhHHHHHHHHHHHh----CCCCCC---CEEEEEEechhHhhHhHeeeC
Confidence 999987 48999999999999999999988 889999 999999999999999999997
No 17
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=1.1e-48 Score=377.83 Aligned_cols=311 Identities=21% Similarity=0.301 Sum_probs=254.9
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++|+|+|+++++++++.+.++ .. .+++.+++||++||++.+++
T Consensus 1 ~~~I~~i~~~lP~~~~~~~~~~~~~~---~~---------~~~~~~~~Gi~~r~~~~~~~-------------------- 48 (320)
T cd00830 1 NARILGIGSYLPERVVTNDELEKRLD---TS---------DEWIRTRTGIRERRIADPGE-------------------- 48 (320)
T ss_pred CCEEEEEEEECCCcEEcHHHHHHHcC---CC---------HHHhhhccCceEEeeCCCCC--------------------
Confidence 57899999999999999999998752 11 26788899999999997765
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+.+|++++|+++|+++++||.||++++++ +..|+.+.+|+++||+++.+ +++++++|++++.||.+|
T Consensus 49 -----~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~~~~--~~~v~~~C~s~~~al~~A 121 (320)
T cd00830 49 -----TTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAKNAA--AFDINAACSGFLYGLSTA 121 (320)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCc--EeeccccchHHHHHHHHH
Confidence 3899999999999999999999999999999988 67899999999999998553 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----eecC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~~~p 249 (395)
..+|++|+.+++|||++|.++..+ ++. ++...++|||||+|+||++++.. ++ ......+... ..++
T Consensus 122 ~~~i~~g~~~~vLvv~~e~~s~~~-~~~-----~~~~~~~~GDgAaA~ll~~~~~~~~i---~~~~~~~~~~~~~~~~~~ 192 (320)
T cd00830 122 AGLIRSGGAKNVLVVGAETLSRIL-DWT-----DRSTAVLFGDGAGAVVLEATEEDPGI---LDSVLGSDGSGADLLTIP 192 (320)
T ss_pred HHHHHcCCCCEEEEEEehhhcccc-Ccc-----cCCceEEEeccceEEEEEecCCCCcE---EEEEEEEcCCCCCeEEeC
Confidence 999999999999999999988633 332 22357899999999999987652 21 0112211110 1112
Q ss_pred CCcCccceEE-ecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh
Q 016111 250 GSDSDVAGQF-REMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 250 ~~~~~~~~~~-~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~ 326 (395)
.......+.. ...+..+.+ ++.+++.+.+.++++++++|+++|+++ +|| +|++||+|.++++.+++.||+|++|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgl~~~~~~ 271 (320)
T cd00830 193 AGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMPESIEEALEKAGLTP-DDIDWFVPHQANLRIIEAVAKRLGLPEEKVV 271 (320)
T ss_pred CCCcCCccccccccCccEEEcChHHHHHHHHhhHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhh
Confidence 1111000000 111223444 888998888999999999999999997 999 999999999999999999999999987
Q ss_pred HHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 327 ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 327 ~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
. ++++|||++++|+|++|++++++ +++++| |+++++++|+|++|+++++
T Consensus 272 ~---~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 272 V---NLDRYGNTSAASIPLALDEAIEE----GKLKKG---DLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred h---hHHhhCcHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchHHhhHHhhC
Confidence 5 69999999999999999999998 889999 9999999999999999875
No 18
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=5.4e-48 Score=375.96 Aligned_cols=317 Identities=17% Similarity=0.186 Sum_probs=247.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++.+.++ .. .+++.+++||++||++.+++
T Consensus 3 ~~v~I~~~~~~lP~~~v~~~~l~~~~g---~~---------~~~~~~~~Gi~~r~~~~~~~------------------- 51 (339)
T PRK06840 3 MNVGIVGTGVYLPKDVMTAEEIAEKTG---IP---------EEVVIEKFGIYEKPVPGPED------------------- 51 (339)
T ss_pred CceEEEEEEEeCCCcccCHHHHHHHhC---CC---------HHHHhhhcCcceEeeCCCCC-------------------
Confidence 689999999999999999999988752 12 26677899999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecC-C-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLV-G-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t-~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
+..+|+.+|++++|+++|+++++||+||+++++ + +..|+.+.+|+++||+++.. +++++++|++++.||.
T Consensus 52 ------~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~~~--~~~v~~~C~~~~~al~ 123 (339)
T PRK06840 52 ------HTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKNAW--AFDIMAVCASFPIALK 123 (339)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCCcc--cccccccchHHHHHHH
Confidence 389999999999999999999999999987654 4 67899999999999998654 7899999999999999
Q ss_pred HHHHHHHc-CCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeee----e
Q 016111 173 MAKDFAEN-NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQ----T 246 (395)
Q Consensus 173 ~A~~ll~~-g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~----~ 246 (395)
+|.++|++ |..+++|||++|..+. +.++.+. ... ..++|||||+|+||++++.. ++ ....+.+.+. .
T Consensus 124 ~A~~~l~~~g~~~~~Lvv~~~~~s~-~~~~~~~--~~~-~~~~~GDgAaA~ll~~~~~~~~i---l~~~~~t~~~~~~~~ 196 (339)
T PRK06840 124 VAKDLLYSDPSIENVLLVGGYRNSD-LVDYDNP--RTR-FMFNFAAGGSAALLKKDAGKNRI---LGSAIITDGSFSEDV 196 (339)
T ss_pred HHHHHHhcCCCccEEEEEeeccccc-ccCcCCC--Cee-eeccCCCceeEEEEEecCCCCce---EEEEEEEcCCccceE
Confidence 99999999 7789999999999886 3333221 110 01347999999999987653 11 0111111111 1
Q ss_pred ecCCCcC--ccceEEecCc-eEEEe-CchhHHH-----HHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHH
Q 016111 247 ILPGSDS--DVAGQFREMG-LTVHL-SKNVATV-----VSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEA 316 (395)
Q Consensus 247 ~~p~~~~--~~~~~~~~~g-~~~~~-~~~v~~~-----~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~ 316 (395)
.+|.... .........+ ..+.+ ++..++. ....++++++++|+++|+++ +|| +|++||.|.++++.+++
T Consensus 197 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~-~did~~~~h~~~~~~~~~~~~ 275 (339)
T PRK06840 197 RVPAGGTKQPASPETVENRQHYLDVIDPESMKERLDEVSIPNFLKVIREALRKSGYTP-KDIDYLAILHMKRSAHIALLE 275 (339)
T ss_pred EecCCCcCCCCcccccccccceEEEcCcHHHHHHhHhhHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCcCHHHHHHHHH
Confidence 1121110 0000000111 12223 3444442 23457789999999999997 999 89999999999999999
Q ss_pred HcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 317 KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 317 ~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
+||+|++|+. ++++||||+++|+|++|++++++ +++++| |+++++++|+|++|+++++||.+
T Consensus 276 ~Lgl~~~~~~----~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~ill~~~G~G~s~~~~~l~~~~ 337 (339)
T PRK06840 276 GLGLTEEQAI----YLDEYGHLGQLDQILSLHLALEQ----GKLKDG---DLVVLVSAGTGYTWAATVIRWGP 337 (339)
T ss_pred HcCCCHHHeE----eHHhccchhhhhHHHHHHHHHHc----CCCCCC---CEEEEEEEehhhheeEEEEEecC
Confidence 9999999975 38999999999999999999987 889999 99999999999999999999975
No 19
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.4e-47 Score=376.61 Aligned_cols=354 Identities=19% Similarity=0.257 Sum_probs=268.4
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhh---cc-CCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRV---TN-SDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAY 86 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~---~~-~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~ 86 (395)
..++++++..++|.|+. +++.+.+.+..... +. .+..++..++++||.+++||.+|++..+...
T Consensus 64 ~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~---------- 133 (478)
T PLN02932 64 RPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQ---------- 133 (478)
T ss_pred CCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccc----------
Confidence 46779999999999884 88999888876432 11 1111334678999999999999998854331
Q ss_pred CCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccch
Q 016111 87 DGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCY 165 (395)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~ 165 (395)
..+++++++.+++...+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++.. ..++++ +||+
T Consensus 134 -~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i-~~fdL~gmGCS 211 (478)
T PLN02932 134 -CLPLQQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNI-KSLNLGGMGCS 211 (478)
T ss_pred -cCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCc-eEEEeccchhh
Confidence 1247889999999999999999999999999999999999999999999999999999999998655 389998 8999
Q ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeee
Q 016111 166 IGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQ 245 (395)
Q Consensus 166 ~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~ 245 (395)
|++.||++|++++++++.++||||++|.+|..+ ++.+ ++..+.+.++|||||+|+||++.+... ....+++.+...
T Consensus 212 ggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~r~~l~t~~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~v~ 287 (478)
T PLN02932 212 AGVIAIDAAKSLLQVHRNTYALVVSTENITQNL-YLGN-NKSMLVTNCLFRIGGAAILLSNRSRDR--KRAKYELVHTVR 287 (478)
T ss_pred hHHHHHHHHHHHHHcCCCCeEEEEEEeeccccc-CCCc-chhhhccceeecccceEEEEecccccc--cCcceEEEeeee
Confidence 999999999999999999999999999999754 3543 244456789999999999999865321 113456653322
Q ss_pred eec---CCCcCccceEEecCce-EEEeCchhHHHHHHHHHHHH----------------------HHhhcc--CCCCC-C
Q 016111 246 TIL---PGSDSDVAGQFREMGL-TVHLSKNVATVVSENIEKCL----------------------DEAFSP--FGIKD-W 296 (395)
Q Consensus 246 ~~~---p~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~~~~i----------------------~~~L~~--~gl~~-~ 296 (395)
.+. +.+.+.+.+...++|. .+.++++++..+.+.++..+ +++++. .++.+ +
T Consensus 288 t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~ 367 (478)
T PLN02932 288 VHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDF 367 (478)
T ss_pred eeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhH
Confidence 221 1111112222222332 33445555544333322111 111211 12221 1
Q ss_pred -Cce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEE
Q 016111 297 -NSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 297 -~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
++| +|++||+|+.+++.+++.||++++++..++.++++||||+|+|+|+.|+++.++ |++++| |+|++++|
T Consensus 368 ~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~----grik~G---d~vl~iaF 440 (478)
T PLN02932 368 KLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMKKG---DRIWQIAL 440 (478)
T ss_pred HhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHc----CCCCCC---CEEEEEEE
Confidence 356 899999999999999999999997776667789999999999999999999877 899999 99999999
Q ss_pred ccchhhhheeeeecC
Q 016111 375 GAGVTVDTVVLRSFP 389 (395)
Q Consensus 375 G~G~s~~a~ll~~~~ 389 (395)
|+|++|+++++|...
T Consensus 441 GsGf~~~s~vw~~~~ 455 (478)
T PLN02932 441 GSGFKCNSSVWVALR 455 (478)
T ss_pred eccHHHHHHHHHHhc
Confidence 999999999998764
No 20
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=6e-48 Score=372.46 Aligned_cols=310 Identities=22% Similarity=0.341 Sum_probs=257.3
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.++|+|+|+++++++++.+.++ .++ .++.+++||++||+..+++
T Consensus 2 ~~~I~~i~~~~P~~~~~~~~~~~~~~---~~~---------~~i~~~~gi~~r~~~~~~~-------------------- 49 (318)
T TIGR00747 2 YAGILGTGSYLPEKVLTNADLEKMVD---TSD---------EWIVTRTGIKERRIAADDE-------------------- 49 (318)
T ss_pred CCEEEEEEEECCCceecHHHHHHhcC---Cch---------HHeecccCceEEEECCCCC--------------------
Confidence 47899999999999999999988752 121 5678889999999997766
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
++.+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.++++.||+++.+ +++++++|++++.||.+|
T Consensus 50 -----~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~~~--~~~v~~~C~s~~~al~~A 122 (318)
T TIGR00747 50 -----TSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKGIP--AFDLSAACAGFIYALSVA 122 (318)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCCCc--EeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999988 77899999999999998754 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeee----eecC
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQ----TILP 249 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~----~~~p 249 (395)
.++|++|..+++||+++|..+. +.++.+ +....+|||||+|+||++++... + ..+.+.+.+. ..+|
T Consensus 123 ~~~i~~g~~~~~Lvv~~e~~~~-~~~~~~-----~~~~~~~GDGAaA~lL~~~~~~~~i---~~~~~~~~~~~~~~~~~~ 193 (318)
T TIGR00747 123 KQYIESGKYKTVLVVGAEKLSS-TLDWTD-----RGTCVLFGDGAGAVVLGESEDPGGI---ISTHLGADGTQGEALYLP 193 (318)
T ss_pred HHHHHcCCCCEEEEEEehhhcC-cCCcCC-----CCeEEEEecceeEEEEeecCCCCcE---EEEEEEEcCCCcceEEEC
Confidence 9999999999999999999886 333332 22357899999999999977532 2 1223332221 1223
Q ss_pred CCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH
Q 016111 250 GSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT 328 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~ 328 (395)
..... .....++....+.++++.+.+.+.++++++|+++|+++ +|| +|++||++.++++.+++.||+|.+|+..
T Consensus 194 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lgi~~~k~~~- 268 (318)
T TIGR00747 194 AGGRP---TSGPSPFITMEGNEVFKHAVRKMGDVVEETLEANGLDP-EDIDWFVPHQANLRIIEALAKRLELDMSQVVK- 268 (318)
T ss_pred CCCcC---CCCCCCceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHcCCCHHHeee-
Confidence 22111 01112222333788888888889999999999999997 999 9999999999999999999999999985
Q ss_pred HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 329 RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 329 ~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
++++||||++||+|++|++++++ |++++| |+|+++++|+|++|++++|||
T Consensus 269 --~~~~~Gn~~sas~~~~L~~~~~~----~~~~~G---d~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 269 --TVHKYGNTSAASIPLALDELLRT----GRIKPG---DLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred --hHhhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEehhheeeEEEEEC
Confidence 59999999999999999999998 889999 999999999999999999998
No 21
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=6.3e-48 Score=376.20 Aligned_cols=305 Identities=15% Similarity=0.188 Sum_probs=243.4
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|+|+|+++++|+++.+.++ .+ .+|+.+++||++||++.+++
T Consensus 1 ~~v~I~~~g~ylP~~~v~~~el~~~~~---~~---------~~~i~~~~Gi~~R~~~~~~~------------------- 49 (347)
T PRK04262 1 MMVGIVGYGAYIPRYRIKVEEIARVWG---DD---------PEAIKRGLGVEEKSVPGPDE------------------- 49 (347)
T ss_pred CceeEEEEEEeCCCEEecHHHHHHHhC---cC---------HHHHhhccCeeeeecCCCCc-------------------
Confidence 468999999999999999999998752 22 27899999999999997766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|+++||+++|++++|||+||++|+++ +..|+.+.+|+++||+++.. ++++++++|+|++.||.+
T Consensus 50 ------~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~-~~~dv~~~C~~~~~aL~~ 122 (347)
T PRK04262 50 ------DTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDL-TAADLEFACKAGTAALQA 122 (347)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCc-eEEEHHHhHHHHHHHHHH
Confidence 3899999999999999999999999999999988 78899999999999998643 378999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDS 253 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 253 (395)
|.+++++|..++||||++|.... +|.+ .. ..+|||||+|+||++++.. .++.+.... .+...+
T Consensus 123 A~~~i~sg~~~~aLVv~~e~~~~---~~~~-----~~-~~~~GDGA~A~ll~~~~~~-------~~i~~~~~~-~~d~~d 185 (347)
T PRK04262 123 AMGLVKSGMIKYALAIGADTAQG---APGD-----AL-EYTAAAGGAAFIIGKEEVI-------AEIEATYSY-TTDTPD 185 (347)
T ss_pred HHHHHHcCCCCEEEEEEEeeecc---CCCC-----CC-CCcCCCCcEEEEEecCccc-------ceeeccccc-cccchh
Confidence 99999999999999999998432 2332 11 2467999999999975432 222211100 111111
Q ss_pred ccc---eEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHH
Q 016111 254 DVA---GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATR 329 (395)
Q Consensus 254 ~~~---~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~ 329 (395)
.+. +.....+.. +... ..+.+.++++++++|+++|+++ +|| +|++||+|.++++.++++||+|++|++.++
T Consensus 186 ~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~i~~~L~~~gl~~-~dId~~v~Hq~n~~~~~~~~~~Lgl~~ek~~~~~ 260 (347)
T PRK04262 186 FWRREGEPYPRHGGR--FTGE--PAYFKHIISAAKGLMEKLGLKP-SDYDYAVFHQPNGKFPLRVAKMLGFTKEQVKPGL 260 (347)
T ss_pred hcCCCCCcCCCcCce--ecch--HHHHHHHHHHHHHHHHHhCcCH-HHhceeecCCCchHHHHHHHHHcCCCHHHhhccc
Confidence 110 001111111 1111 1223567889999999999997 999 999999999999999999999999998642
Q ss_pred HHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 330 HVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 330 ~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++++||||++||+|++|++++++ +++| |+|++++||+|++|.++++||.+
T Consensus 261 -~~~~~GNt~sAsi~~~L~~~~~~------~~~G---d~vll~~~G~G~~~~~~~~~~~~ 310 (347)
T PRK04262 261 -LTPYIGNTYSGSALLGLAAVLDV------AKPG---DRILVVSFGSGAGSDAFSITVTD 310 (347)
T ss_pred -hhhhhCChHHHHHHHHHHHHHHh------CCCC---CEEEEEecCCCcceeeEEEEech
Confidence 47999999999999999999864 6789 99999999999999999999965
No 22
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.7e-47 Score=376.81 Aligned_cols=331 Identities=18% Similarity=0.210 Sum_probs=256.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.|+|+|+|+++++|+++.+.++... +..+ ...+|+++++||++||++.+++. .+..
T Consensus 1 ~~v~I~gig~~lP~~~v~n~~~~~~~~~~~--~~~~---~~~~~i~~~~Gi~~R~~~~~~~~---~~~~----------- 61 (378)
T PRK06816 1 MNVYITSTGAFLPGEPVSNDEMEAYLGLIN--GKPS---RARRIILRNNGIKTRHYALDPEG---RPTH----------- 61 (378)
T ss_pred CCeEEEeeeecCCCCccCHHHHHHHHhhcc--CCcH---HHHHHHHHhCCCceEEEEECCCC---CCCC-----------
Confidence 368999999999999999999988764321 1111 12368999999999999875420 1111
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|+++||+++|++++|||+||++++++ +..|+.+..|+++||+++.. +++++.+|+|++.||.+
T Consensus 62 ------~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~--~~~v~~~Cas~~~al~~ 133 (378)
T PRK06816 62 ------SNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPPIE--VVSSAGVCAAGMMALKY 133 (378)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCCCc--eeeecCcCHHHHHHHHH
Confidence 3789999999999999999999999999999998 78898899999999998754 88999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCC----------------chhhhhhhhhccccEEEEEecCCCC-CCCCCC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDAN----------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKP 236 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~----------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~ 236 (395)
|..++++|..++||||++|.+|..+ ++.+.. .+....+++|||||+|+||++.+.. +.
T Consensus 134 A~~~i~sg~~~~vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~g~---- 208 (378)
T PRK06816 134 AYLSVKAGESRNAVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPDGL---- 208 (378)
T ss_pred HHHHHHCCCCCEEEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCCCc----
Confidence 9999999999999999999998643 232100 0111124579999999999986652 21
Q ss_pred ceEE--Eeeee--e----ec-CCCc-----CccceEEe------cCc-eEEEe-CchhHHHHHHHHHHHHHHhhccCCCC
Q 016111 237 LFQI--VSGAQ--T----IL-PGSD-----SDVAGQFR------EMG-LTVHL-SKNVATVVSENIEKCLDEAFSPFGIK 294 (395)
Q Consensus 237 ~~~~--~~~~~--~----~~-p~~~-----~~~~~~~~------~~g-~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~ 294 (395)
.+.+ ....+ . .. +... ....|... .++ ..+.+ ++.+++.+...+++.++++|+++|++
T Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~ 288 (378)
T PRK06816 209 SLRIDWIDLRSYAGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASALSLKQDVRLLNENIVVYTIKPLLELVDKRNLD 288 (378)
T ss_pred eEEEEEEeeecccccCccceecCCccCCCCCccCcccCCHHHHHhccCchHHhHHHHHHHHhHHHHHHHHHHHHHHcCCC
Confidence 1221 11110 0 01 1100 01112110 112 12333 67788888888899999999999999
Q ss_pred CCCce-EEEEcCCChHHHHHHHHHc-----CCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCce
Q 016111 295 DWNSL-FWIVQPGGPAIVNQIEAKL-----GLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEW 368 (395)
Q Consensus 295 ~~~di-~~i~hq~~~~~~~~i~~~l-----gi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~ 368 (395)
+ +|| +|++||+|.++++.++++| |+|++|++. ++++||||++||+|++|++++++ |++++| |+
T Consensus 289 ~-~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~~~---~~~~~GNt~sAsipi~L~~a~~~----g~~~~G---d~ 357 (378)
T PRK06816 289 P-DDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKWFT---NLATVGNTGSASIYIMLDELLNS----GRLKPG---QK 357 (378)
T ss_pred h-hhCCEEeeCcccHHHHHHHHHHHHhccCCCChhheEE---eccccccccchHHHHHHHHHHHc----CCCCCC---CE
Confidence 7 999 9999999999999999987 999999886 59999999999999999999998 899999 99
Q ss_pred EEEEEEccc-hhhhheeeeec
Q 016111 369 GVMFGIGAG-VTVDTVVLRSF 388 (395)
Q Consensus 369 vll~~~G~G-~s~~a~ll~~~ 388 (395)
|++++.|+| +++|.++|+|.
T Consensus 358 vl~~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 358 ILCFVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEEEEecccchhheeEEEEEC
Confidence 999987766 99999999984
No 23
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.3e-47 Score=366.66 Aligned_cols=311 Identities=23% Similarity=0.347 Sum_probs=256.9
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+++|.++|+|+|+++++++++.+..+ .. .+++.+++||++|+++.+++
T Consensus 2 ~~v~I~ai~~~lP~~~~~~~~~~~~~~---~~---------~~~i~~~~gi~~r~~~~~~~------------------- 50 (319)
T PRK09352 2 MYAKILGTGSYLPERVVTNDDLEKMVD---TS---------DEWIVTRTGIKERRIAAPDE------------------- 50 (319)
T ss_pred CceEEEEEEEECCCeEEcHHHHHHHcC---CC---------HHHhhhhcCeEEEEeCCCCC-------------------
Confidence 358899999999999999999998742 11 15677899999999987766
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..+|+.+|++++|+++|+++++||.|+++++++ +..|+.+.+|+.+||+.+.+ +++++++|++++.||..
T Consensus 51 ------~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~~~--~~~v~~~Casg~~al~~ 122 (319)
T PRK09352 51 ------TTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKNAA--AFDLSAACSGFVYALST 122 (319)
T ss_pred ------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCCCc--EeeccccchhHHHHHHH
Confidence 3899999999999999999999999999999987 66888999999999997654 78899999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee----ecC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT----ILP 249 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~----~~p 249 (395)
|.++|++|..++|||+++|.++..+ ++.+ +...++|||||+|+||++++..++ ..+++.+.+.. ..|
T Consensus 123 A~~~i~~g~~~~vLvv~~e~~s~~~-~~~~-----~~~~~~~gDGaaA~ll~~~~~~~~---~~~~~~~~~~~~~~~~~~ 193 (319)
T PRK09352 123 ADQFIRSGAYKNVLVIGAEKLSRIV-DWTD-----RSTCVLFGDGAGAVVLGASEEPGI---LSTHLGSDGSYGDLLYLP 193 (319)
T ss_pred HHHHHHcCCCCEEEEEEehhhcccc-Cccc-----CCceEEEeccceEEEEEEcCCCCe---EEEEEEEcCCCCCeEEeC
Confidence 9999999999999999999988633 3322 223679999999999999765322 12333332211 123
Q ss_pred CCcCccceEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 250 GSDSDVAGQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 250 ~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
.......+. .+ .+.+ ++.+++.+.+.+.++++++|+++|+++ +|| +|++||+|.++++.+++.||+|.+++..
T Consensus 194 ~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~g~~~-~di~~~~~h~~~~~~~~~~~~~lg~~~~~~~~ 268 (319)
T PRK09352 194 GGGSRGPAS---PG-YLRMEGREVFKFAVRELAKVAREALEAAGLTP-EDIDWLVPHQANLRIIDATAKKLGLPMEKVVV 268 (319)
T ss_pred CCCCCCCCC---CC-ceEECCHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHHHHHHHHhCCCHHHhhh
Confidence 222111100 11 2333 677888888889999999999999997 999 9999999999999999999999999864
Q ss_pred HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 328 TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 328 ~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
++.+|||++++|+|++|++++++ |++++| |+++++++|+|++|++++|||+
T Consensus 269 ---~~~~~Gn~~~a~~~~~L~~~~~~----g~~~~G---d~vll~s~G~G~~~~~~ll~~~ 319 (319)
T PRK09352 269 ---TVDKYGNTSAASIPLALDEAVRD----GRIKRG---DLVLLEGFGGGLTWGAALVRWP 319 (319)
T ss_pred ---hHHhhCCHHHHHHHHHHHHHHHc----CCCCCC---CEEEEEEEchhheeEEEEEEeC
Confidence 59999999999999999999998 889999 9999999999999999999985
No 24
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=4e-47 Score=369.69 Aligned_cols=305 Identities=14% Similarity=0.138 Sum_probs=239.6
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.|+|+|+|+++++|+++.+.++ .+ .+|+.+++||++||++.++++
T Consensus 1 ~~~I~g~g~~lP~~~v~n~~l~~~~~---~~---------~~~i~~~~Gi~~r~v~~~~~~------------------- 49 (345)
T TIGR00748 1 MAGIVGYGAYIPMYRIKVEEIARVWG---KD---------PESISNGLPVEEKAVPGLDED------------------- 49 (345)
T ss_pred CccEEEEEEeCCCeeecHHHHHHHhC---CC---------HhHeeeccceeeeecCCCCCC-------------------
Confidence 36899999999999999999987742 22 278889999999999987763
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+.+|+++|+++||+++|+++++||+||++|+++ +..|+.+..+++.||++... ++++++.+|+|++.||.+|
T Consensus 50 ------~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~-~~~dv~~aC~g~~~al~~A 122 (345)
T TIGR00748 50 ------TATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDL-TAADLEFACKAGTAGIQAC 122 (345)
T ss_pred ------HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCc-eEEEHHHhHHHHHHHHHHH
Confidence 899999999999999999999999999999888 77899999999999997443 3899999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeec--CCCc
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTIL--PGSD 252 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~--p~~~ 252 (395)
.++|++|..+++|||++|..+. +|.+ . ..+.|||||+|+||++.+.. .++........ +...
T Consensus 123 ~~~i~sg~~~~vLVv~~d~~~~---~~~~-----~-~~~~~GDGAaA~vl~~~~~~-------~~~~~~~~~~~d~~~~~ 186 (345)
T TIGR00748 123 MGLVASGMIKYGLAIGADTAQG---APGD-----A-LEYTAGAGGAAYIIGEKNTV-------AYFEGTYSYTTDTPDFW 186 (345)
T ss_pred HHHHHcCCCCEEEEEEEeeccc---CCCc-----c-CcccCCCceEEEEEccCCcc-------eEeecccceeccccccc
Confidence 9999999999999999999874 2332 1 13678999999999975532 11111000000 0000
Q ss_pred CccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHH
Q 016111 253 SDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHV 331 (395)
Q Consensus 253 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~ 331 (395)
..........+..+.....+++. ..++++++|+++|+++ +|| +|++||+|.++++.+.++||+|++|++.+. .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~L~~~gl~~-~did~~i~Hq~~~~~~~~~~~~lgl~~ek~~~~~-~ 260 (345)
T TIGR00748 187 RREGEPYPRHGGRFTGEPAYFHH----VVTAAKGLMEKLGLTP-EDFDYAVFHQPNGKFYLVAARMLGFPKEQVKPGL-L 260 (345)
T ss_pred ccCCCcCCCcCCeecChHHHHHH----HHHHHHHHHHHcCCCH-HHcCEEEeCCCChHHHHHHHHHcCCCHHHeeccc-c
Confidence 00000000001111111334443 3478899999999997 999 999999999999999999999999988641 1
Q ss_pred HHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 332 LSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 332 ~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.++||||++||+|++|+++++. +++| |+|++++||+|++|++++++|.+
T Consensus 261 ~~~~GNt~sAsipl~L~~~~~~------~~~G---d~vll~~~G~G~s~~~~~~~~~~ 309 (345)
T TIGR00748 261 TPRIGNTYSGATPVGLSAVLDI------AEPG---DRILAVSYGSGAGSDAFSIVVQD 309 (345)
T ss_pred ccccCchhhhHHHHHHHHHHHh------cCCC---CEEEEEEecCCcceeEEEEEEch
Confidence 3899999999999999998864 7899 99999999999999999999974
No 25
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.8e-46 Score=367.09 Aligned_cols=343 Identities=19% Similarity=0.271 Sum_probs=253.6
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhc---cCCchhHHH---------HHHHHHHHhcCcceeeeeecchhhhcCCCC
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVT---NSDHMTLLK---------QKFKRICEKSNVKKRYFHVTEDILKKNPNI 83 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~---~~~~~~~~~---------~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 83 (395)
+++|.|+|+|+|+++++|+++.+.+.... ..++.+++. ...+||.+++||++||++.+.+.+. .+
T Consensus 2 ~~~I~~~g~~lP~~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~--~~- 78 (372)
T PRK07515 2 NVVISGTGLYTPPESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILD--PD- 78 (372)
T ss_pred CcEEEEEEeecCCccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCc--cc-
Confidence 57899999999999999999988753110 001100110 0257899999999999986421110 00
Q ss_pred cCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCc
Q 016111 84 CAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQ 162 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~ 162 (395)
...+...+++..+.....+|+.+|+++||+++|+++++||.||++++++ +..|+.+..|++.||++. . +++++.
T Consensus 79 --~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~~-~--~~~v~~ 153 (372)
T PRK07515 79 --RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIEG-F--AFDMNV 153 (372)
T ss_pred --ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCCC-c--EEEecc
Confidence 0112233333333345689999999999999999999999999999887 788999999999999973 3 789999
Q ss_pred cchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEe
Q 016111 163 GCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVS 242 (395)
Q Consensus 163 ~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~ 242 (395)
+|+|++.||.+|.++|++|..++|||+++|.++. +.++. ++...++|||||+|+||++.+.... +..+++..
T Consensus 154 aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~-~~~~~-----d~~~~~lfGDgAaA~vL~~~~~~~~--~~~~~il~ 225 (372)
T PRK07515 154 ACSSATFGIQTAANAIRSGSARRVLVVNPEICSG-HLNFR-----DRDSHFIFGDVATAVIVERADTATS--AGGFEILG 225 (372)
T ss_pred hhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccc-ccccc-----CCCCCEEecCccEEEEEeecccccc--CCCceEEE
Confidence 9999999999999999999999999999999886 33333 2224789999999999998654210 01122322
Q ss_pred ee-----eeecCCCcCcc---c-eEEecCceEEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHH
Q 016111 243 GA-----QTILPGSDSDV---A-GQFREMGLTVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV 311 (395)
Q Consensus 243 ~~-----~~~~p~~~~~~---~-~~~~~~g~~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~ 311 (395)
.. ...++...+.. . .........+.+ |+.+++.+.+.++++|+++|+++|+++ +|| +|++||+|.+++
T Consensus 226 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~L~~~gl~~-~dId~~~~Hq~~~~~~ 304 (372)
T PRK07515 226 TRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIVEHLAENGLTP-ADVKRFWLHQANINMN 304 (372)
T ss_pred EEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEECCCCHHHH
Confidence 11 01111000000 0 001111123455 788899999999999999999999997 999 999999999999
Q ss_pred HHHHHH-cCC--CccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 312 NQIEAK-LGL--KQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 312 ~~i~~~-lgi--~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+.+.++ ||+ +.++.+. ++++||||+|||+|++|+++. +++++| |+|++++||+|++|++++||.
T Consensus 305 d~~~~~llg~~~~~~~~~~---~~~~~GNt~sasi~~~L~~~~------~~~~~G---d~vll~~~G~G~~~~~~ll~~ 371 (372)
T PRK07515 305 QLIGKKVLGRDATPEEAPV---ILDEYANTSSAGSIIAFHKHS------DDLAAG---DLGVICSFGAGYSIGSVIVRK 371 (372)
T ss_pred HHHHHHhccCCCChhhceE---eHHhcCCchhhHHHHHHHHHh------ccCCCC---CEEEEEEecccHHHHHHHhcc
Confidence 999988 564 5566554 599999999999999999974 347899 999999999999999999985
No 26
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.1e-44 Score=361.44 Aligned_cols=352 Identities=16% Similarity=0.197 Sum_probs=261.6
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++||.+ +...|.... ..+
T Consensus 94 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~ri~~~sgig~-~t~~p~~~~----------~~~ 160 (502)
T PLN02377 94 RPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFD--DSSLEFQRKILERSGLGE-DTYVPEAMH----------YIP 160 (502)
T ss_pred CCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCC--HHHHHHHHHHHHhcCCCC-ccccCchhc----------cCC
Confidence 4567999999999988 4899999998876443222 455667889999999988 444453210 123
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecC-ccchhHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGA 168 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~ 168 (395)
.+..++.+.+.+.+++.+|+++||+++|++|+|||+||+ ++|+ +..|+++.+|+++||+++.. ..++++ +||+|++
T Consensus 161 ~~~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v-~afdL~gmGCsggl 238 (502)
T PLN02377 161 PRPSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNI-RSFNLGGMGCSAGV 238 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCC-eEEecccchhhHHH
Confidence 455799999999999999999999999999999999987 7888 68999999999999999655 389998 7999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCC-CceEEEeeeeee
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEK-PLFQIVSGAQTI 247 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~-~~~~~~~~~~~~ 247 (395)
.||++|++++++++.++||||++|.+|..+ ++.+ +.......++|||||+|+||++.+....+.. ..+.+.......
T Consensus 239 ~aL~lA~~ll~~~~~~~aLVVstE~~S~~~-~~~d-~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~ 316 (502)
T PLN02377 239 IAVDLAKDMLQVHRNTYAVVVSTENITQNW-YFGN-KKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGA 316 (502)
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEecccccc-CCCC-CccccccceeeccccEEEEEecccccccccccccceEEEEEEEE
Confidence 999999999999999999999999999744 3443 2223334699999999999998543210000 011222221111
Q ss_pred cCCCcCccceEEecCce-EEE-------------------eCc-------hhHHHHHHHHHHHHHHhhccCC-CCCCCce
Q 016111 248 LPGSDSDVAGQFREMGL-TVH-------------------LSK-------NVATVVSENIEKCLDEAFSPFG-IKDWNSL 299 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~-~~~-------------------~~~-------~v~~~~~~~~~~~i~~~L~~~g-l~~~~di 299 (395)
.+...+.+.+...+.|. .+. +++ .++.++...+++.+++.++..+ ... +++
T Consensus 317 d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~-~di 395 (502)
T PLN02377 317 DDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFK-LAF 395 (502)
T ss_pred cCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcH-hhc
Confidence 11100000000000010 000 122 2333556666777777776654 333 677
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccch
Q 016111 300 -FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378 (395)
Q Consensus 300 -~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 378 (395)
+|++||+|+++++.+++.||+++++...++.++++||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 396 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~----grik~G---d~VlliaFGsGf 468 (502)
T PLN02377 396 DHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAK----GRMRKG---NRVWQIAFGSGF 468 (502)
T ss_pred CEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHc----CCCCCC---CeEEEEEEcccc
Confidence 999999999999999999999975555556689999999999999999999987 999999 999999999999
Q ss_pred hhhheeeeecC
Q 016111 379 TVDTVVLRSFP 389 (395)
Q Consensus 379 s~~a~ll~~~~ 389 (395)
+|+++++||..
T Consensus 469 ~~~s~v~~~~~ 479 (502)
T PLN02377 469 KCNSAVWEALR 479 (502)
T ss_pred EeeeEEEEEec
Confidence 99999999975
No 27
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.5e-44 Score=357.70 Aligned_cols=351 Identities=15% Similarity=0.221 Sum_probs=261.2
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++|+.+..+..+.-. ...
T Consensus 110 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sg~g~~ty~P~~~~-----------~~~ 176 (521)
T PLN02854 110 RSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFE--DETVQFQRRISTRSGLGDETYLPRGIT-----------SRP 176 (521)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCccccCcccc-----------CCC
Confidence 4567999999999987 4899999988876443222 455677889999999998876654321 112
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecC-ccchhHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGA 168 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~ 168 (395)
.+..++..++........|++++|+++|++|+|||+||++ |++ +..|+++.+|+++||+++.. .+++++ +||+|++
T Consensus 177 ~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~-cS~~~p~PSlAa~I~n~LGlr~~i-~afdLsgmGCSggl 254 (521)
T PLN02854 177 PNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVN-CSLFNPTPSLSAMIVNHYKLRTDI-KSYNLGGMGCSAGL 254 (521)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEE-CCCCCCCCCHHHHHHHHhCCCCCc-eEEecccchhhhHH
Confidence 3346778888889999999999999999999999999975 677 68999999999999998654 389998 8999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee--
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT-- 246 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~-- 246 (395)
.||++|++++++++.++||||++|.+|..+. +. .++....+.++|||||+|+||++.+... ....+++.+....
T Consensus 255 ~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y-~g-~Drs~lv~~~LFgDGAAAvlLs~~~~~~--~~~k~~L~~~v~t~~ 330 (521)
T PLN02854 255 ISIDLANDLLKANPNSYAVVVSTENITLNWY-FG-NDRSMLLCNCIFRMGGAAVLLSNKARDR--KRSKYQLVHTVRTHK 330 (521)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeecCCC-CC-CchhhhcceeeeccceeEEEEecccccc--cccchheeeEEEEEE
Confidence 9999999999999999999999999985432 11 1233334478999999999999855221 0112332211110
Q ss_pred ----------ecCCC-cCcc----ceEE-ecCc----eEEEe-CchhHHHHHHH--HHHHHHHhhccCCCCCC-----Cc
Q 016111 247 ----------ILPGS-DSDV----AGQF-REMG----LTVHL-SKNVATVVSEN--IEKCLDEAFSPFGIKDW-----NS 298 (395)
Q Consensus 247 ----------~~p~~-~~~~----~~~~-~~~g----~~~~~-~~~v~~~~~~~--~~~~i~~~L~~~gl~~~-----~d 298 (395)
..+.. .+.. ...+ ...+ ..+++ |+.++...... +...+++.|.++|+++. ++
T Consensus 331 ~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~d 410 (521)
T PLN02854 331 GADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLA 410 (521)
T ss_pred eeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCccccc
Confidence 11110 0000 0000 0000 01112 44444433222 45678888989998852 36
Q ss_pred e-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccc
Q 016111 299 L-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAG 377 (395)
Q Consensus 299 i-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G 377 (395)
+ +|++||+|+.+++.++++||+++++...++.++.+||||+|+|+|+.|+++.++ |++++| |+|++++||+|
T Consensus 411 idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~k----Grik~G---D~Vl~iaFGsG 483 (521)
T PLN02854 411 FEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAK----GRVSAG---DRVWQIAFGSG 483 (521)
T ss_pred CcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHc----CCCCCC---CEEEEEEEchh
Confidence 7 999999999999999999999954444444579999999999999999999987 999999 99999999999
Q ss_pred hhhhheeeeecC
Q 016111 378 VTVDTVVLRSFP 389 (395)
Q Consensus 378 ~s~~a~ll~~~~ 389 (395)
++|+++++||..
T Consensus 484 ft~~sav~~~~~ 495 (521)
T PLN02854 484 FKCNSAVWKALR 495 (521)
T ss_pred hhhhheeeEEec
Confidence 999999999986
No 28
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=9.5e-44 Score=353.83 Aligned_cols=352 Identities=16% Similarity=0.216 Sum_probs=256.2
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
..++++++..++|.|+. +++.+.+.+.....+..+ ++..+++.++.+++|+.+..+..+.-. . ..
T Consensus 98 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~sglg~~t~~p~~~~-~----------~~ 164 (511)
T PLN02192 98 RPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFT--EENLEFQRKILERSGLGESTYLPEAVL-N----------VP 164 (511)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHhcCCCCcccCChhhc-c----------CC
Confidence 35679999999999884 899999998876443222 455678889999999999877654321 1 11
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC-ccchhHHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF-QGCYIGAT 169 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~-~~C~~~~~ 169 (395)
.+..++..++....+...|+++||+++|++|+|||+||++++..+..|+++..|+++||++... ..++++ +||+|++.
T Consensus 165 ~~~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i-~afdLsgmGCSggl~ 243 (511)
T PLN02192 165 PNPCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNI-LSYNLGGMGCSAGLI 243 (511)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCc-eEEEcccchhhhHHH
Confidence 2235677788899999999999999999999999999987553378999999999999998554 389998 79999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
||++|++++++++.++||||++|.+|..+. +.+ ++......++|||||+|+||++.+... ..+.+++.+....+.+
T Consensus 244 aLdlA~~lL~a~~~~~aLVVstE~~S~n~y-~g~-drs~lv~n~LFgDGAaAvLLs~~~~~~--~~~k~~L~~~vrt~~~ 319 (511)
T PLN02192 244 SIDLAKHLLQVHPNSYALVISMENITLNWY-FGN-DRSMLVSNCLFRMGGAAILLSNKRSDR--RRSKYQLVHTVRTHKG 319 (511)
T ss_pred HHHHHHHHHHcCCCCeEEEEEEEeccccCC-CCC-CHHHHhccccccccceEEEEecccccc--ccccceeeeeEEEEec
Confidence 999999999999999999999999995442 111 233333448999999999999854321 1123444432222233
Q ss_pred CCcCccceEE----ecCceEEEeCchhHHHHHHHHHHHHHHh--------------hccCC-------CC--C---CCce
Q 016111 250 GSDSDVAGQF----REMGLTVHLSKNVATVVSENIEKCLDEA--------------FSPFG-------IK--D---WNSL 299 (395)
Q Consensus 250 ~~~~~~~~~~----~~~g~~~~~~~~v~~~~~~~~~~~i~~~--------------L~~~g-------l~--~---~~di 299 (395)
.++..+.+.. .+.+..+.++++++..+...++..++.+ +.-.| ++ + -.+|
T Consensus 320 ~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~I 399 (511)
T PLN02192 320 ADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAF 399 (511)
T ss_pred CChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhh
Confidence 2222221111 0112234445555544443332222111 00000 10 0 0246
Q ss_pred -EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccch
Q 016111 300 -FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGV 378 (395)
Q Consensus 300 -~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~ 378 (395)
+|++||+|+++++.+++.||++++++..++.++.+||||+|+|+|+.|+++.++ |++++| |+|++++||+|+
T Consensus 400 dhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eak----grik~G---DrVl~iaFGsGf 472 (511)
T PLN02192 400 EHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAK----GRIKKG---DRTWQIAFGSGF 472 (511)
T ss_pred ceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHc----CCCCCC---CEEEEEEEcchH
Confidence 899999999999999999999985554455579999999999999999999987 899999 999999999999
Q ss_pred hhhheeeeecC
Q 016111 379 TVDTVVLRSFP 389 (395)
Q Consensus 379 s~~a~ll~~~~ 389 (395)
+|+++++||..
T Consensus 473 ~~~sav~~~~~ 483 (511)
T PLN02192 473 KCNSAVWKALR 483 (511)
T ss_pred hhhhhheeeec
Confidence 99999999975
No 29
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.4e-42 Score=338.69 Aligned_cols=349 Identities=19% Similarity=0.280 Sum_probs=269.4
Q ss_pred CCCCeEEEeeeeeCCC--cccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPP--NCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
...+++++..++|.|+ ++++.+.+.+.....+..+ ++..+++.++.+++||.+--+..+.- +...| .++
T Consensus 56 ~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~--~~s~~F~~~i~~rSGlg~et~~p~~~-~~~~~------~~~ 126 (466)
T PLN00415 56 RSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYT--EETIQFMTRILNRSGLGDDTYSPRCM-LTSPP------TPS 126 (466)
T ss_pred CCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCC--HHHHHHHHHHHHHcCCCCCeeeCCcc-ccCCC------CCC
Confidence 4568999999999987 4899999988875433222 45566788899999998865543322 11001 111
Q ss_pred hhHHHHHHHHhHHHHHHH-HHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCc-cchhH
Q 016111 91 LDSRQDILVREVPKLGEE-AATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQ-GCYIG 167 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~-Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~-~C~~~ 167 (395)
+ +. .+...+|+.. |++++|+++|++|+|||+||+ ++|+ +..|+++.+|+.+||+++.. ..++++. ||+|+
T Consensus 127 ~----~~-~~~e~em~i~~A~~~aL~~aGi~p~dID~LIv-s~T~~~~~Pslaa~l~~~LGLr~~v-~~~dL~gmGCsgg 199 (466)
T PLN00415 127 M----YE-ARHESELVIFGALNSLFKKTGIEPREVGIFIV-NCSLFNPNPSLSSMIVNRYKLKTDV-KTYNLSGMGCSAG 199 (466)
T ss_pred h----hh-hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECcCCCCCchHHHHHHHHhCCCCCc-eEEEeccccchHH
Confidence 1 11 1245666666 777889999999999999985 5778 58999999999999999665 3789985 99999
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI 247 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
+.||++|++++++++.++||||++|.+|..+.++++ +......++|||||+|+||++++... ..+.|++......+
T Consensus 200 v~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~d--r~~lv~n~LFgDGAAAvlLs~~~~~~--~~~~~~L~~~vrt~ 275 (466)
T PLN00415 200 AISVDLATNLLKANPNTYAVIVSTENMTLSMYRGND--RSMLVPNCLFRVGGAAVMLSNRSQDR--VRSKYELTHIVRTH 275 (466)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCc--HhHhccceeecccceEEEEecCcccc--cCccceeeeEEEec
Confidence 999999999999999999999999999975544332 44445568999999999999865421 12356554333333
Q ss_pred cCCCcCccc---eEEecCce-EEEeCchhHHHHHHHHHHHHHHhhccCC----------------------CCC----CC
Q 016111 248 LPGSDSDVA---GQFREMGL-TVHLSKNVATVVSENIEKCLDEAFSPFG----------------------IKD----WN 297 (395)
Q Consensus 248 ~p~~~~~~~---~~~~~~g~-~~~~~~~v~~~~~~~~~~~i~~~L~~~g----------------------l~~----~~ 297 (395)
.|.+++.+. |...++|+ .+.++++++..+.+.++..++.+ ...+ +++ ++
T Consensus 276 ~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l-~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd~~ 354 (466)
T PLN00415 276 KGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTAL-GPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFK 354 (466)
T ss_pred CCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHh-hhhccchHHHHHHHHHHHhhhhhhccCCCCCCCcc
Confidence 366665555 56666776 77889999999888877766553 2222 221 12
Q ss_pred c-e-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEc
Q 016111 298 S-L-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 298 d-i-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
. + +|++|++++++++.+++.||++++++..+|+++++||||+|+|+++.|+++..+ ++.++| |++++++||
T Consensus 355 ~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~----~~~~~G---drvl~iaFG 427 (466)
T PLN00415 355 LCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAK----CRVKRG---DRVWQLAFG 427 (466)
T ss_pred ccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhh----ccCCCC---CEEEEEEEc
Confidence 1 4 899999999999999999999999999999999999999999999999999877 788999 999999999
Q ss_pred cchhhhheeeeecC
Q 016111 376 AGVTVDTVVLRSFP 389 (395)
Q Consensus 376 ~G~s~~a~ll~~~~ 389 (395)
+|+++.++++|+..
T Consensus 428 pGf~~es~v~~~~~ 441 (466)
T PLN00415 428 SGFKCNSIVWRALR 441 (466)
T ss_pred CcchhhHhHHHHhc
Confidence 99999999999975
No 30
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=5.1e-43 Score=338.79 Aligned_cols=308 Identities=26% Similarity=0.366 Sum_probs=247.5
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
.++|.++|+|+|+++++|+++++.++ . .++...+||++||+..+++
T Consensus 1 ~v~I~~i~~~lP~~~v~~~~~~~~~~----~----------~~~~~~~gi~~r~~~~~~~-------------------- 46 (324)
T cd00827 1 DVGIEAIGAYLPRYRVDNEELAEGLG----V----------DPGKYTTGIGQRHMAGDDE-------------------- 46 (324)
T ss_pred CccEEEEEecCCceeecHHHHHHHhC----C----------CcceeeeecceeEecCCCC--------------------
Confidence 36899999999999999999988752 1 2567789999999997655
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+..+|+.+|++++|+++|+++++||+||++++++ +..|+.+.+|++.||++..+ +++++++|++++.||.+|
T Consensus 47 -----~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~~~~--~~~v~~~C~s~~~al~~A 119 (324)
T cd00827 47 -----DVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLTNAE--AFDLKQACYGGTAALQLA 119 (324)
T ss_pred -----CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCCCCc--eeehhhhhHHHHHHHHHH
Confidence 3899999999999999999999999999999888 56889999999999998543 889999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCc--
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSD-- 252 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~-- 252 (395)
.++|++|..+++||+++|.++.... + .....++|||||+|+||++.+... .+.+........+...
T Consensus 120 ~~~i~~g~~~~vlvv~~e~~~~~~~---~----~~~~~~~~gdgaaA~ll~~~~~~~-----~~~i~~~~~~~~~~~~~~ 187 (324)
T cd00827 120 ANLVESGPWRYALVVASDIASYLLD---E----GSALEPTLGDGAAAMLVSRNPGIL-----AAGIVSTHSTSDPGYDFS 187 (324)
T ss_pred HHHHHcCCCCEEEEEEEHHhhhccc---C----CCCccccccCceEEEEEecCcccc-----cCCceeeeeecccccccC
Confidence 9999999999999999999986331 1 112478999999999999877520 0111111111111110
Q ss_pred --CccceEEe-----cCceEEEeC---chhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCCh-HHHHHHHHHcCC
Q 016111 253 --SDVAGQFR-----EMGLTVHLS---KNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGP-AIVNQIEAKLGL 320 (395)
Q Consensus 253 --~~~~~~~~-----~~g~~~~~~---~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~-~~~~~i~~~lgi 320 (395)
..+..... .....|.+. +.++..+.+.++++++++|++.|++ +|+ +|++||+|. .+++.+.+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~i~~~~~h~~~~~~~~~~~~~~l~~ 265 (324)
T cd00827 188 PYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLIAKVVRKALDRAGLS--EDIDYFVPHQPNGKKILEAVAKKLGG 265 (324)
T ss_pred ccceeccCCCcchhhhhhcceeecCCccchHHHHhHHHHHHHHHHHHHcccc--cccceeeccCchHHHHHHHHHHHccc
Confidence 00100000 011234442 4788888899999999999999988 678 999999999 999999999999
Q ss_pred CccchhHHHH-HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 321 KQQKLSATRH-VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 321 ~~e~~~~~~~-~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+.+++..++. ++++|||++++|+|++|++++++ +++++| |+|+++++|+|++|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~----~~~~~G---d~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 266 PPEKASQTRWILLRRVGNMYAASILLGLASLLES----GKLKAG---DRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred hHhhhccchhhHHHHhCchHHHHHHHHHHHHHhc----CCCCCC---CEEEEEEeccchhheeccC
Confidence 9888876432 69999999999999999999998 889999 9999999999999998864
No 31
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=8.2e-41 Score=328.97 Aligned_cols=304 Identities=19% Similarity=0.216 Sum_probs=238.7
Q ss_pred eEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHH
Q 016111 17 ATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQD 96 (395)
Q Consensus 17 ~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (395)
|+|.++|.|+|+++++++++++..+ .+ .+|+.+.+|+++|++..++|+
T Consensus 1 iGI~~i~~y~P~~~v~~~ela~~~g---~~---------~~~~~~g~G~~~~~~~~~~ed-------------------- 48 (379)
T TIGR01835 1 IGIDKISFFTPQNYLDMTALAEARG---VD---------PEKFHIGIGQKKMAVPPIDED-------------------- 48 (379)
T ss_pred CCEeEEEEECCCEEeeHHHHHHHhC---CC---------HHHHHhhcCceEEeeCCCCCC--------------------
Confidence 5799999999999999999998742 22 267888999999999887763
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~ 175 (395)
+.+|+++|++++|+++ ++++||+||++|+++ +..|+.+..|++.||+++.+ ++++++++|+|++.||.+|.
T Consensus 49 -----~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~-~~~dv~~aC~gg~~aL~~A~ 120 (379)
T TIGR01835 49 -----IVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFC-RSFELKQACYGATAALQMAK 120 (379)
T ss_pred -----HHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCc-eEEEeccccHHHHHHHHHHH
Confidence 7999999999999998 899999999999999 77899999999999998654 38999999999999999999
Q ss_pred HHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCcc
Q 016111 176 DFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDV 255 (395)
Q Consensus 176 ~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 255 (395)
+++.+|+.++||||++|.... . +.. ....+|||||+|+||++++. + +.+..... .. +.+.+
T Consensus 121 ~~i~s~~~~~aLVv~~D~a~~--~-~~~------~~~~~~GdGA~A~Ll~~~~~--i-----~~~~~~~~-~~--t~~~~ 181 (379)
T TIGR01835 121 GHVALSPDRKVLVIASDIAKY--G-LES------PGEPTQGAGAVAMLVSADPK--L-----LAINEDSV-LY--TDDIM 181 (379)
T ss_pred HHHHcCCCCeEEEEEeehhhc--c-cCC------CCCccccCccEEEEEecCCC--e-----eEEeccce-ee--ecCCC
Confidence 999999999999999999653 1 111 12467999999999998653 1 22211000 00 11111
Q ss_pred ceEEecCce-EEEe-CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHH----HHHHHHHcCCCc-cchh-
Q 016111 256 AGQFREMGL-TVHL-SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAI----VNQIEAKLGLKQ-QKLS- 326 (395)
Q Consensus 256 ~~~~~~~g~-~~~~-~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~----~~~i~~~lgi~~-e~~~- 326 (395)
++ .++.+. ...+ ++.....+.+.++++++++|+++|+++ +|+ +|++||++.++ ++.+.+.++++. +++.
T Consensus 182 df-~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~-~did~~i~H~p~~~~~~k~~~~~l~~~~~~~~~~~~~ 259 (379)
T TIGR01835 182 DF-WRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL-ADFAAFCFHVPFTKMGLKALRHILKKNYEDEDESVQN 259 (379)
T ss_pred Cc-cCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH-HHcCEEEECCCCCcHHHHHHHHHHhhcccccHHHHHH
Confidence 10 111121 1223 677777888899999999999999997 999 99999998777 344666778773 3333
Q ss_pred ---HHHHHHHhcCCCccchHHHHHHHHHHhhhhcC-CccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 327 ---ATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG-KVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 327 ---~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g-~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.++.+.+++|||+++|+|++|+.+++. + ++++| |+|+|+++|+|+......++..
T Consensus 260 ~~~~s~~~~~~~GN~~sas~~l~L~~~l~~----~~~~~~G---d~ill~s~GsG~~ae~~~~~~~ 318 (379)
T TIGR01835 260 AYLESIIYNREVGNLYTGSLYLGLASLLEN----AFEDTTG---DKIGLFSYGSGAVAEFFSGTLV 318 (379)
T ss_pred HhhhhhhhhhhcCchHhHHHHHHHHHHHHh----cccCCCC---CEEEEEEecCCcceeeEEEEEc
Confidence 233468999999999999999999986 4 68999 9999999999999877777664
No 32
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=5.4e-38 Score=311.16 Aligned_cols=306 Identities=18% Similarity=0.220 Sum_probs=234.0
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeee--cchhhhcCCCCcCCCCCChh
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHV--TEDILKKNPNICAYDGSSLD 92 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~--~~~~~~~~~~~~~~~~~~~~ 92 (395)
.+++|.++|.|+|+++|+|+++.+.+ +.++ +|+ .+||.+|+++. ++|
T Consensus 3 ~~vgI~gig~Y~P~~~v~n~eLa~~~---g~~~---------~~~--~~GI~~r~~ava~~~E----------------- 51 (459)
T PLN02577 3 KNVGILAMEVYFPPTCVQQEALEAHD---GVSK---------GKY--TIGLGQDCMAFCTDVE----------------- 51 (459)
T ss_pred CccEEEEEEEeCCCeEEcHHHHHHHh---CCCH---------HHH--hhccceeEeccCCCCC-----------------
Confidence 36899999999999999999998875 2232 675 68999999764 555
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHH---HHcCCCCccccceecCccchhHH
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLT---KMLGLNPSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~---~~Lgl~~~~~~~~~i~~~C~~~~ 168 (395)
++.+||++|++++|+++|+++++||+||++|+|+ +..|+++..|+ ++||.++. +++|++.+|+|++
T Consensus 52 --------d~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~~~--~afDi~~AC~G~~ 121 (459)
T PLN02577 52 --------DVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNTDI--EGVDSTNACYGGT 121 (459)
T ss_pred --------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCCCc--EEeehhhhhHHHH
Confidence 3899999999999999999999999999999999 88999998886 67887765 3899999999999
Q ss_pred HHHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeee
Q 016111 169 TAIRMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQT 246 (395)
Q Consensus 169 ~aL~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~ 246 (395)
.||.+|.++|++|. .++||||++|..+... +|. ...+||||+|+||+.++.. .++....+ .
T Consensus 122 ~AL~~A~~~i~sg~~~~~~aLVV~aD~a~~~~-~~~---------e~t~GdGA~A~lv~~~~~~------~l~~~~~g-~ 184 (459)
T PLN02577 122 AALLNCVNWVESSSWDGRYGLVVAADSAVYAE-GPA---------RPTGGAGAVAMLVGPNAPI------VFESKYRG-S 184 (459)
T ss_pred HHHHHHHHHHHcCCCCCCeEEEEEechhhccC-CCC---------CCCCCcceEEEEEccCCCc------eeeccccc-c
Confidence 99999999999986 5999999999988532 232 2346999999999975531 12111000 0
Q ss_pred ecCCCcCccceEEecCc--eEEEe-CchhHHHHHHHHHHHHHHhhccC------CCCCCCce-EEEEcCCChHHHHHHHH
Q 016111 247 ILPGSDSDVAGQFREMG--LTVHL-SKNVATVVSENIEKCLDEAFSPF------GIKDWNSL-FWIVQPGGPAIVNQIEA 316 (395)
Q Consensus 247 ~~p~~~~~~~~~~~~~g--~~~~~-~~~v~~~~~~~~~~~i~~~L~~~------gl~~~~di-~~i~hq~~~~~~~~i~~ 316 (395)
.+.+.++ .+++++ ....+ |+.+++++.+.++.++++++++. |++. +|+ +++|||+..+|.+...+
T Consensus 185 ---~~~~~~D-f~rP~~~~~~~~vdG~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~~-~d~d~~vfHqP~~km~~ka~~ 259 (459)
T PLN02577 185 ---HMAHVYD-FYKPDLASEYPVVDGKLSQTCYLMALDSCYKRFCEKYEKLEGKQFSI-SDADYFVFHAPYNKLVQKSFA 259 (459)
T ss_pred ---cCcccch-hcccCCCCCceEEcchHHHHHHHHHHHHHHHHHHHHhhcccccCCCH-HHcCEEEecCCccchhHHHHH
Confidence 0001111 012221 11333 89999999999999999998877 7886 899 99999998888766555
Q ss_pred HcCCC----------------------------------------------ccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 317 KLGLK----------------------------------------------QQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 317 ~lgi~----------------------------------------------~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+|.+. .+|+..+...-+++||++++|+++.|..+
T Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YTaSlyl~L~Sl 339 (459)
T PLN02577 260 RLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVGNMYTASLYAALASL 339 (459)
T ss_pred HHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcCcccchHHHHHHHHH
Confidence 54311 02333333356899999999999999999
Q ss_pred HHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 351 RRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 351 ~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
++.. ....+| ++|+++|+|+|......-+++.+
T Consensus 340 L~~~---~~~~~G---~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 340 VHNK---HSELAG---KRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred Hhhc---cccCCC---CEEEEEeecCCccceeEEEEEeC
Confidence 9752 113388 99999999999998888887765
No 33
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=3e-38 Score=283.86 Aligned_cols=225 Identities=44% Similarity=0.707 Sum_probs=193.7
Q ss_pred ccccccccCCCCCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCC
Q 016111 4 VKDGKNQQQGGGLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNI 83 (395)
Q Consensus 4 ~~~~~~~~~~~~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~ 83 (395)
|.++++.+...++.+|.|||+.+|+++++++++.+.+.+....++.++.++++.++++++||++||...|.+.+...|.+
T Consensus 2 ~~~~~~~~~~~g~A~Il~IgTA~P~~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~ 81 (226)
T PF00195_consen 2 VSEMRRAQRSPGPAYILSIGTAVPPHRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSF 81 (226)
T ss_dssp HHHHHHHHS-SSSEEEEEEEEE-SSEEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGG
T ss_pred HHHHhhcccCCCCeEEEEEEEeCCCceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcch
Confidence 67889999999999999999999999999999999876655555545677888999999999999999988777777877
Q ss_pred cCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCcc
Q 016111 84 CAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQG 163 (395)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~ 163 (395)
..+..|++.+|++.|.+...+|+.+|+++||+++|++++||++||++|||++..|++..+|.++|||++.+.++....+|
T Consensus 82 ~~~~~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~G 161 (226)
T PF00195_consen 82 WDFADPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMG 161 (226)
T ss_dssp HSSSSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-G
T ss_pred hhccCccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccc
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999888888999
Q ss_pred chhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC
Q 016111 164 CYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 164 C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
|++++.+|+.|..+.++++..+||||++|.+|.+|+.|++.+.++.....+|||||+|+||+.+|
T Consensus 162 C~gg~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 162 CAGGAAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp GGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred hhhHHHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999999999999999999999999878756565678889999999999999999875
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=8.3e-36 Score=282.56 Aligned_cols=308 Identities=19% Similarity=0.239 Sum_probs=246.5
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
++++|.++|.|+|..+|..+++++..+ -+ .+++.+.+|+.++.+..++|+
T Consensus 1 ~~iGI~~~g~y~p~~~i~~~ela~~~g----~d--------~~k~~~gl~~~e~sv~~~~ED------------------ 50 (377)
T COG3425 1 MMIGIVGIGAYIPRYRIKLEELARAWG----VD--------PEKIKKGLGVEEKSVPPWDED------------------ 50 (377)
T ss_pred CccccceEEEeccceEeeHHHHHhhcC----CC--------hHHhhhccccccccCCCCchh------------------
Confidence 368999999999999999999998732 11 266788899999999988884
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRM 173 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~ 173 (395)
+..||++||+++|+++++||.+|++|+++|.|+ +...+.+..|++.||+++.. +++++..+|.++..||+.
T Consensus 51 -------~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~-~~~d~~~AC~agT~aL~~ 122 (377)
T COG3425 51 -------AVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSA-RAADVEFACYAGTAALQA 122 (377)
T ss_pred -------HHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCce-ehhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999998 88999999999999999886 599999999999999999
Q ss_pred HHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeee--cCCC
Q 016111 174 AKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTI--LPGS 251 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~--~p~~ 251 (395)
|..++.+|+.+++|||++|+.... |.+ ......|+||+|+||++++.. ...+...+..+ .|+.
T Consensus 123 a~~~v~s~~~~~~LvI~sD~a~~~---~~~------~~E~t~GAGavA~lIg~n~~~------~a~~~~~~syt~d~~DF 187 (377)
T COG3425 123 AIGWVESGMISYGLVIGADTAQYA---PGD------ALEYTAGAGAVAFLIGKNPPI------VAEFEGTGSYTTDTPDF 187 (377)
T ss_pred HHHHHHcCCccceEEEeehhhccC---CCc------ccCccCCCceEEEEEccCCCe------EEEecCceEEecCCCcc
Confidence 999999999999999999998742 322 124668999999999997432 12221111111 1111
Q ss_pred cCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHH
Q 016111 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
.....+.....+ |+..-..+.+++..+.++++++.|+++ +|+ ++++||++.++....++.++++.+++..+..
T Consensus 188 wRp~~~~yp~~d-----g~~s~~~Y~~~~~~a~~~~~~k~gls~-~dfdy~vfH~P~~k~~~ka~k~l~~~~e~v~~~l~ 261 (377)
T COG3425 188 WRPDGQPYPYVD-----GRFSEPAYFKHVENAAKGYMEKTGLSP-DDFDYIVFHQPNGKFPKKAAKSLGFKEEQVKPGLV 261 (377)
T ss_pred cccCCCcccccC-----ceecHHHHHHHHHHHHHHHHHHhCCCh-hhhCeEEecCCCCchHHHHHHHhCccHhhcCccch
Confidence 110001111111 222234567788899999999999997 999 9999999999999999999999888877744
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
..++.||++++|+++.|..+++. -+ .+| |+|+++++|+|......-++..+
T Consensus 262 ~~~~vGN~YtgS~~L~Las~L~~----a~-~~G---~rIl~~SYGSGa~s~~fs~~v~~ 312 (377)
T COG3425 262 YPQRIGNTYTGSLLLGLASLLDN----AK-LPG---DRILLFSYGSGAGSEAFSITVTD 312 (377)
T ss_pred hhhhcCcccchhHHHHHHHHHhh----cC-CCC---CEEEEEeeCCCcceeEEEEEecc
Confidence 45689999999999999999997 33 589 99999999999887666555543
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=100.00 E-value=1.5e-33 Score=279.15 Aligned_cols=307 Identities=19% Similarity=0.202 Sum_probs=211.9
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeee--eecchhhhcCCCCcCCCCCChhH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYF--HVTEDILKKNPNICAYDGSSLDS 93 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (395)
+++|.++|.|+|+++|+|+++++.. +.+ .+|+ .+||.+|++ +.++|
T Consensus 1 ~vgI~~ig~y~P~~~v~~~eLa~~~---g~~---------~~k~--~~GI~~rr~av~~~~E------------------ 48 (454)
T TIGR01833 1 DVGILALEIYFPSQYVDQAELEKYD---GVS---------AGKY--TIGLGQTKMGFCTDRE------------------ 48 (454)
T ss_pred CcEEEEEEEeCCCeEEcHHHHHHhc---CCC---------HHHh--eechhheecccCCCCC------------------
Confidence 5799999999999999999998764 221 1555 599999994 55555
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHc---CCCCccccceecCccchhHHH
Q 016111 94 RQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKML---GLNPSVKRVMLYFQGCYIGAT 169 (395)
Q Consensus 94 ~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~L---gl~~~~~~~~~i~~~C~~~~~ 169 (395)
++.+|+++|++++|+++++++++||+||++|.++ +..|+.+..|++.| |.++. ++++++++|+|++.
T Consensus 49 -------d~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~--~~fDi~~AC~G~t~ 119 (454)
T TIGR01833 49 -------DINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDV--EGIDTTNACYGGTA 119 (454)
T ss_pred -------CHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCc--eEEeccccchhHHH
Confidence 3899999999999999999999999999999999 89999999999855 45554 38999999999999
Q ss_pred HHHHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCC-CceEEEeeeee
Q 016111 170 AIRMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEK-PLFQIVSGAQT 246 (395)
Q Consensus 170 aL~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~-~~~~~~~~~~~ 246 (395)
||.+|.++++++. .++||||++|.... . +. ....++||||+|+||++++.-.+... ....... ...
T Consensus 120 AL~~A~~~i~s~~~~~~~aLVV~sDia~y--~-~~-------~~~~t~GaGAvAmLv~~~~~~~~~~~~~~~~~~~-~~D 188 (454)
T TIGR01833 120 ALFNAINWIESSSWDGRYALVVAGDIAVY--A-KG-------NARPTGGAGAVAMLIGPNAPIVFERGLRGSHMQH-AYD 188 (454)
T ss_pred HHHHHHHHHHcCCcCCCeEEEEEeccccc--c-CC-------CeeeccccceEEEEeccCccceecCccceEEEee-ccc
Confidence 9999999999985 69999999999542 1 11 12457899999999998775211000 0111111 011
Q ss_pred ec-CCCcCccceEEecCceEEEeCchhHHHHHHHH-------HHHHHHhhcc----CCCCCCCce-EEEEcCCChHHHHH
Q 016111 247 IL-PGSDSDVAGQFREMGLTVHLSKNVATVVSENI-------EKCLDEAFSP----FGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 247 ~~-p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~-------~~~i~~~L~~----~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
++ |..... +...+| +.-...+.+.+ .+.+..++++ .|+.+ +|+ +++||++..+|...
T Consensus 189 F~rP~~~~~---~p~vdg------~~S~~~Yl~a~~~~y~~y~~~~~~a~~~~~~~~~~~~-~dfd~~~fH~P~~km~~k 258 (454)
T TIGR01833 189 FYKPDLASE---YPVVDG------KLSIQCYLSALDRCYKSYCKKIEKQWGKSGGDRKFTL-NDFDYMVFHSPYCKLVQK 258 (454)
T ss_pred ccCCCCCCc---ccccCC------ccCHHHHHHHHHHHHHHHHHHHHHhhhhhccccCCCH-hHcCEEeccCCcccHHHH
Confidence 11 221110 000112 11111112221 2223333333 35775 888 99999998777655
Q ss_pred H-HHHc----C-----------------------------------------CCccchhHHHHHHHhcCCCccchHHHHH
Q 016111 314 I-EAKL----G-----------------------------------------LKQQKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 314 i-~~~l----g-----------------------------------------i~~e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
. .+.+ . ...+|+..+...-+++||++++|+++.|
T Consensus 259 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl~L 338 (454)
T TIGR01833 259 SLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYGCL 338 (454)
T ss_pred HHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHHHH
Confidence 3 2222 1 0113343342234699999999999999
Q ss_pred HHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 348 DEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 348 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
..+++... .....| ++|+|+++|+|.......+++.+
T Consensus 339 ~Sll~~~~--~~~~~g---~ri~~fSYGSG~~se~fs~~v~~ 375 (454)
T TIGR01833 339 ASLLSSKS--AQELAG---KRVGMFSYGSGLAASMFSLRVSQ 375 (454)
T ss_pred HHHHhhCC--ccccCC---CEEEEEeccCCcceeeEEEEEeC
Confidence 99998521 113468 99999999999998888888775
No 36
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.96 E-value=9.4e-30 Score=237.48 Aligned_cols=236 Identities=29% Similarity=0.334 Sum_probs=188.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..+|+.+|++++|+++|++++|||.||++++++ +..|+.+.+|+..||+++.+ .++++.+|++++.||.+|..+|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~--~~~i~~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGP--AYSVNQACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCC--cceeccHhHHHHHHHHHHHHHHHC
Confidence 789999999999999999999999999999998 66899999999999997443 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEE
Q 016111 181 NPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQF 259 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 259 (395)
|..+++||+++|. ++|||||+|+||++.+.. ..+..+..++.+......+... +
T Consensus 85 g~~~~~lv~~~e~-------------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~----~-- 139 (254)
T cd00327 85 GKADIVLAGGSEE-------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASM----V-- 139 (254)
T ss_pred CCCCEEEEEecce-------------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCC----C--
Confidence 9999999999988 358999999999986531 0001123344432221111100 0
Q ss_pred ecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchh--HHHHHHHhcC
Q 016111 260 REMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLS--ATRHVLSEYG 336 (395)
Q Consensus 260 ~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~--~~~~~~~~~G 336 (395)
+....+.+.++++++|+++|+++ +|+ +|++|+.+..+++.+.+.++++.++.. .......+||
T Consensus 140 -------------~~~~~~~~~~~i~~~l~~ag~~~-~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 205 (254)
T cd00327 140 -------------PAVSGEGLARAARKALEGAGLTP-SDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTG 205 (254)
T ss_pred -------------CCCChHHHHHHHHHHHHHcCCCH-HHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccc
Confidence 00123446678999999999997 999 999999999999999999999877763 0112689999
Q ss_pred CCccchHHHHHHHHHHhhhhcCCcc-------CCCCCceEEEEEEccchhhhheee
Q 016111 337 NMGGVSVFFILDEIRRKSAEEGKVT-------TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 337 n~~sas~~i~L~~~~~~~~~~g~i~-------~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
|++++|.++.|.++++. .+.+ +| ++++++++|.|+++++++|
T Consensus 206 ~~~~as~~~~l~~~~~~----~~~~~~~~~~~~~---~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 206 HPLGAAGLAILDELLLM----LEHEFIPPTPREP---RTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred cchHHHHHHHHHHHHHH----HhCCCcCCCCCCc---CEEEEeeEcCCCcceEEEC
Confidence 99999999999999876 3333 66 8999999999999999875
No 37
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.95 E-value=1.2e-27 Score=231.98 Aligned_cols=257 Identities=25% Similarity=0.270 Sum_probs=189.2
Q ss_pred HHHHHHHHHHHHHHHhCCC----CCCcCEEEEEecCC-CC---------------------CCCHHHHHHHHcCCCCccc
Q 016111 102 VPKLGEEAATKAIKEWGQS----KSQITHLIFCSLVG-VD---------------------MPGADYQLTKMLGLNPSVK 155 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~----~~~Id~vi~~s~t~-~~---------------------~p~~a~~l~~~Lgl~~~~~ 155 (395)
..+|+++|++++|+++|++ +++||.||++++++ +. .|+.+.+|+..||++..
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~-- 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHGP-- 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCCC--
Confidence 6789999999999999999 99999999998876 43 67889999999999543
Q ss_pred cceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCC----------CCC--CCchhhhhhhhhccccEEEE
Q 016111 156 RVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRG----------PSD--ANLGCLAGQALFGDGAAALI 223 (395)
Q Consensus 156 ~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~----------~~~--~~~~~~~~~~~fGDgAaA~v 223 (395)
++++..+|++++.||.+|..+|++|..+++||+++|..+..+.. |.. ....+...+++|||||+|+|
T Consensus 89 -~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 -AYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred -ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 68899999999999999999999999999999999987642211 000 00112335889999999999
Q ss_pred EecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EE
Q 016111 224 IGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FW 301 (395)
Q Consensus 224 l~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~ 301 (395)
|++.+.. ..+.....++...+....+.... .+....+.+.++++++|+++|+++ +|| ++
T Consensus 168 L~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~~~~~~~i~~al~~agl~~-~did~~ 228 (332)
T cd00825 168 VEELEHALARGAHIYAEIVGTAATIDGAGMG------------------AFAPSAEGLARAAKEALAVAGLTV-WDIDYL 228 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEEEEEccCCCCCC------------------CCCcCHHHHHHHHHHHHHHcCCCH-hHCCEE
Confidence 9976531 00011223443332211111100 001123456678999999999997 999 99
Q ss_pred EEcCCChHHHHHHHHHcCCCccch---hHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-----------------
Q 016111 302 IVQPGGPAIVNQIEAKLGLKQQKL---SATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT----------------- 361 (395)
Q Consensus 302 i~hq~~~~~~~~i~~~lgi~~e~~---~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~----------------- 361 (395)
++|+.+..+.+.+.++++++.++. .. +.+..+|||+++++.++.|..+++... .+.+-
T Consensus 229 ~~h~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~~~G~~~aas~~~~l~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 306 (332)
T cd00825 229 VAHGTGTPIGDVKELKLLRSEFGDKSPAV-SATKAMTGNLSSAAVVLAVDEAVLMLE-HGFIPPSIHIEELDEAGLNIVT 306 (332)
T ss_pred EccCCCCCCCCHHHHHHHHHHhCCCCcee-ECCCcccccchhHhHHHHHHHHHHHHh-cCccCCCCCCCCCCcccCcccC
Confidence 999999999888888877765531 11 126899999999999999999987511 12111
Q ss_pred -----CCCCCceEEEEEEccchhhhheee
Q 016111 362 -----TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 -----~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+| ++++++++|.|.++++++|
T Consensus 307 ~~~~~~~---~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 307 ETTPREL---RTALLNGFGLGGTNATLVL 332 (332)
T ss_pred CCCCCCC---CEEEEeeecCCCeeEEEeC
Confidence 55 8999999999999999885
No 38
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=99.94 E-value=1.5e-24 Score=200.19 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=196.3
Q ss_pred CCCCeEEEeeeeeCCCc--ccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCC
Q 016111 13 GGGLATILAIGTANPPN--CIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSS 90 (395)
Q Consensus 13 ~~~~~~I~gig~~lP~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~ 90 (395)
...+++++...+|.|+. +++.+.+.+.+......+ ++..+++.+|.+++|+.++.+..+.. . ...
T Consensus 5 R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~--~~sl~F~~kIlerSGlG~eTy~P~~~-~----------~~p 71 (290)
T PF08392_consen 5 RPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFD--EESLDFQRKILERSGLGDETYLPPAL-H----------EIP 71 (290)
T ss_pred CCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCC--hhHHHHHHHHHHhcCCCccccCCccc-c----------cCC
Confidence 45589999999999884 899999998875432222 45567788999999999998874432 1 112
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec-CccchhHHH
Q 016111 91 LDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY-FQGCYIGAT 169 (395)
Q Consensus 91 ~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i-~~~C~~~~~ 169 (395)
.+..+..+.+.+..++..|++++|+++|++|+|||.||+.+++++..|+++.+|.+++|++.+.. .+++ ++||++++.
T Consensus 72 ~~~s~~~a~~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~-~~nLsGMGCsAgli 150 (290)
T PF08392_consen 72 PDPSLAAAREEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIK-SYNLSGMGCSAGLI 150 (290)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCee-eecccCCcchhhHH
Confidence 23556667777888999999999999999999999999999998999999999999999998874 6666 789999999
Q ss_pred HHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecC
Q 016111 170 AIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILP 249 (395)
Q Consensus 170 aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p 249 (395)
+|++|+++++..+..++|||+.|..+..+. .. .++....+.++|+|||+|+||++.+.... +..|++.+.-.++..
T Consensus 151 ai~lA~~lL~~~p~~~ALVVstE~~s~~~Y-~G-~~rsmlv~NcLFr~GgAAvLLSn~~~~~~--~aky~L~~~vRt~~g 226 (290)
T PF08392_consen 151 AIDLAKDLLQAHPNSYALVVSTENISANWY-RG-NDRSMLVSNCLFRMGGAAVLLSNKPSDRR--RAKYELLHTVRTHTG 226 (290)
T ss_pred HHHHHHHHHHhCCCcEEEEEEEeecccccc-cC-CcHHHhhccccccCCceeEEeecCccccc--cchhhhhheeeeecC
Confidence 999999999999999999999999997554 22 24566678999999999999999877421 245666654444444
Q ss_pred CCcCccceE---EecCc-eEEEeCchhHHHHHHHHHHHHHH
Q 016111 250 GSDSDVAGQ---FREMG-LTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 250 ~~~~~~~~~---~~~~g-~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..++.+..- ..++| .-+.++|++...+.+.+...|..
T Consensus 227 ~~d~ay~~v~q~eD~~g~~Gv~lsk~l~~vag~al~~ni~~ 267 (290)
T PF08392_consen 227 ADDDAYRCVFQEEDEEGIVGVSLSKDLMKVAGKALKANITT 267 (290)
T ss_pred CCCCceeeEEEeEcCCCceEEEEecchHHHHHHHHHHHHHH
Confidence 444433321 12234 24567899998888777666554
No 39
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.92 E-value=6.7e-24 Score=180.66 Aligned_cols=150 Identities=41% Similarity=0.821 Sum_probs=126.6
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCceEEEEcCCChHHHHHHHHHc
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSLFWIVQPGGPAIVNQIEAKL 318 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~~~~~~~i~~~l 318 (395)
++.+..+.++|++++.+.|.+.+.|+.+.+.++++..+.+.++.+++++|++.|++.+++.+|++|+++++|++.+.+.|
T Consensus 1 el~~~~~~~iP~te~~m~~~i~~~Gf~~~Ls~~vP~~i~~~i~~~~~~~L~~~g~~~~~~~~wavHPGG~~ILd~v~~~L 80 (151)
T PF02797_consen 1 ELVSTSSHLIPDTEDAMGWDIGDTGFHFILSKEVPDLISDNIPPFVEDLLARHGLSDWDILFWAVHPGGRKILDAVEEAL 80 (151)
T ss_dssp EEEEEEEEE-TT-TTSEEEEEETTEEEEEE-TTHHHHHHHHHHHHHHHHHHGGTCCSGGGSEEEEE-SSHHHHHHHHHHH
T ss_pred CceeccceEecCCcCceEEEEeCCeEEEEEhhHhHHHHHHHHHHHHHHHHhhhcccccccceeeecCChHHHHHHHHHHc
Confidence 45667778899999999999999999999999999999999999999999999998634449999999999999999999
Q ss_pred CCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeec
Q 016111 319 GLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 319 gi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
+++++++..+|+++++|||++|+++++.|++++++..++|....|++.+++++++||+|+|..+++||.-
T Consensus 81 ~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~lLr~~ 150 (151)
T PF02797_consen 81 GLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGMLLRSV 150 (151)
T ss_dssp TS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEEEEE-
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEEEeeC
Confidence 9999999999999999999999999999999988433345555544458999999999999999999964
No 40
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.89 E-value=3.3e-22 Score=194.89 Aligned_cols=316 Identities=13% Similarity=0.087 Sum_probs=212.2
Q ss_pred CCeEEEeeeeeCCCcc------------cccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCC
Q 016111 15 GLATILAIGTANPPNC------------IYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPN 82 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~ 82 (395)
.+++|.++|..-|=.. ++|.+....+ .... -+||..++++.+|++.. .+
T Consensus 3 ~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~---~~~~--------~~~i~~~~~~~~~~~~~-~~------- 63 (348)
T PRK06147 3 RALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFI---DPPG--------GEWLIGAPVPLPPPWRG-PE------- 63 (348)
T ss_pred CceEEEecceeecCcCCHHHHHHHHHcccccccccccc---cCCC--------CCceEeecCcCCcccCc-hH-------
Confidence 3588999988877543 3444333221 1110 15777788888888753 23
Q ss_pred CcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCCCcCEEEEEec-----CC-CCCCCHHHHHHHHcCCCCccc
Q 016111 83 ICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWG-QSKSQITHLIFCSL-----VG-VDMPGADYQLTKMLGLNPSVK 155 (395)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag-~~~~~Id~vi~~s~-----t~-~~~p~~a~~l~~~Lgl~~~~~ 155 (395)
...+|+.+|++++|++++ +++++||++|..+. .+ ...+..+..++++||+....
T Consensus 64 ------------------r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~- 124 (348)
T PRK06147 64 ------------------RLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEP- 124 (348)
T ss_pred ------------------HHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCC-
Confidence 278999999999999999 79999999998654 12 34456788999999995433
Q ss_pred cceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----cCCCCCCCchhhhhhhhhccccEEEEEecCCCC
Q 016111 156 RVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----FRGPSDANLGCLAGQALFGDGAAALIIGANPDT 230 (395)
Q Consensus 156 ~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~ 230 (395)
+.+++..+|++++.||..|..+|++|.++.+||+++|..+.. |.........+...+++|||||+++||++.+..
T Consensus 125 ~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~G~v~GEGA~a~vLe~~~~A 204 (348)
T PRK06147 125 GSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSNGFIPGEAAAAVLLGRPAGG 204 (348)
T ss_pred CcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCCceeeeceEEEEEEccHhhh
Confidence 378999999999999999999999999999999999987641 100000000122358999999999999986542
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
.- ....++..+....+.... ...+.. ...+.+.++++++|+++|+++ +|| ++..|..+..
T Consensus 205 ~~---rga~i~a~g~~~~~~~~~------------~~~~~p---~~g~gl~~ai~~AL~~agl~~-~dId~v~ah~~gt~ 265 (348)
T PRK06147 205 EA---PGLPLLGLGLGREPAPVG------------ESEDLP---LRGDGLTQAIRAALAEAGCGL-EDMDYRIADLNGEQ 265 (348)
T ss_pred hc---CCCceEEEEEeecCCCcc------------cCCCCC---CChHHHHHHHHHHHHHcCCCH-HHCCEEEcCCCCCc
Confidence 10 012222211111111000 000000 012456689999999999997 999 8899986554
Q ss_pred HH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhhee
Q 016111 310 IV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVV 384 (395)
Q Consensus 310 ~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~l 384 (395)
.. ..+.+.++-..+..+. +.+-..+||+++|+-++.|...+.. .++| .-+| +++|+++.......++++
T Consensus 266 ~~d~~e~~A~~~~f~~~~~~~~~-~~~k~~~Gh~~aAaG~~~~~~a~~~-~~~g-~~~g---~~~L~~s~~d~g~r~a~~ 339 (348)
T PRK06147 266 YRFKEAALAEMRLFRVRKEFFDL-WHPAECIGEIGAAIGPALLGVALAA-SRKG-YGPG---PNVLCHLSDDDGARAALV 339 (348)
T ss_pred cchHHHHHHHHHHhhhccCCCce-ecchHhhcchHHHHHHHHHHHHHHH-HHcC-cCCC---CcEEEEecCCCCceEEEE
Confidence 42 2234445533222222 1257889999999999999876553 1124 5668 899999999999999999
Q ss_pred eeecCCCCC
Q 016111 385 LRSFPFPTV 393 (395)
Q Consensus 385 l~~~~~~~~ 393 (395)
|+.++.|.+
T Consensus 340 l~~~~~~~~ 348 (348)
T PRK06147 340 LEYRRGPAR 348 (348)
T ss_pred EeccccCCC
Confidence 999988753
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.85 E-value=1.2e-21 Score=153.56 Aligned_cols=89 Identities=26% Similarity=0.536 Sum_probs=77.8
Q ss_pred hccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCC
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGL 366 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~ 366 (395)
|+++|+++ +|| +|++||.|.++++.+++.+|+++++++. ++++|||+++||+|++|++++++ |++++|
T Consensus 1 L~~~g~~~-~did~~i~hq~~~~~~~~~~~~lgi~~~~~~~---~~~~~Gn~~sa~~~~~L~~~~~~----g~~~~G--- 69 (90)
T PF08541_consen 1 LERAGLSP-DDIDHFIPHQASKKILDSIAKRLGIPPERFPD---NLAEYGNTGSASIPINLADALEE----GRIKPG--- 69 (90)
T ss_dssp HHHTT--G-GGESEEEE-SSSHHHHHHHHHHHTS-GGGBE----THHHH-B-GGGHHHHHHHHHHHT----TSSCTT---
T ss_pred CccccCCH-HHCCEEEeCCCCHHHHHHHHHHcCCcHHHHHH---HHhccCcchhhhHHHHHHHHHHc----CCCCCC---
Confidence 57899997 999 9999999999999999999999999887 48999999999999999999998 899999
Q ss_pred ceEEEEEEccchhhhheeeee
Q 016111 367 EWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 367 d~vll~~~G~G~s~~a~ll~~ 387 (395)
|+|+++++|+|++|+++++||
T Consensus 70 d~vl~~~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 70 DRVLLVGFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEEEEEEEETTTEEEEEEEE-
T ss_pred CEEEEEEEEhhheeEEEEEEC
Confidence 999999999999999999998
No 42
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.84 E-value=1.7e-19 Score=168.92 Aligned_cols=244 Identities=15% Similarity=0.179 Sum_probs=162.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+..+|+.+|+++||+++|++++|||+||+++. +. .+..+..+++.||++ .++++.+|++++.||.+|..+|++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~-Q~~~As~vA~~LGIP-----~fdV~~ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN-QIITANFVARDLGIP-----FLGLYGACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC-cccHHHHHHHHhCCC-----EEEEeccCHHHHHHHHHHHHHHhC
Confidence 47899999999999999999999999998873 32 345689999999972 589999999999999999999999
Q ss_pred CCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccce
Q 016111 181 NPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAG 257 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 257 (395)
|.+++|||++++..+. .|+.|.+.--+++.+..+|||||+|+||++.+.. +...-.+.+.. +++
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~ta~~tgdGAGA~vl~~~~~~-----~~i~~~t~gkv--------~d~ 188 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPTAQWTVTGAGAVLLASTGGG-----PRITSATIGKV--------VDY 188 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCCeeeEEEcccEEEEEeecCCC-----CceEEEEEEEE--------Eec
Confidence 9999999999999882 2333422111345578999999999999987543 12222222211 111
Q ss_pred EEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH--H
Q 016111 258 QFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH--V 331 (395)
Q Consensus 258 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~--~ 331 (395)
.+.+ -+.||.-... ...+.|.+.|++.|.++ +|. .++.- ..+.++++.+.++-|++.++.+...- +
T Consensus 189 g~~d---~~nmgaamap----aa~dti~~h~~d~~~~~-~~yd~i~tgdlg~vg~~i~~~ll~~~g~~~~~~~~dcg~~i 260 (327)
T TIGR02845 189 GITD---PLDMGAAMAP----AAADTIEAHFKDTGRSV-DDYDLIVTGDLARVGSEILRKLLKERGYDVTERYDDCGVMI 260 (327)
T ss_pred CCCC---cccchhhhhH----HHHHHHHHHHHHcCCCh-hhccEEEecchHHHHHHHHHHHHHHcCCChhhccccCCeEE
Confidence 1111 1344433222 23356778899999997 888 55433 46778888888888876644221100 0
Q ss_pred ---H--HhcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 332 ---L--SEYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 332 ---~--~~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
- -.-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 261 y~~~~~~~aggsgc~csa~v~~~~~~~~------~~~g~-~~r~l~v~tgalls 307 (327)
T TIGR02845 261 YRPDQQVFAGGSGCACSAVVTYGHILKE------MLRGK-LKKVLVVATGALLS 307 (327)
T ss_pred EcCCCcccCCCcccchhHHHHHHHHHHH------HhcCc-ceEEEEEEchhhcC
Confidence 0 0123344444444444 44544 33332 25899999997444
No 43
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.82 E-value=5.8e-20 Score=157.60 Aligned_cols=166 Identities=22% Similarity=0.297 Sum_probs=129.3
Q ss_pred CCeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHH
Q 016111 15 GLATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSR 94 (395)
Q Consensus 15 ~~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (395)
.+|+|.+++.|+|+.+++.+++++.- +.+. .++....|.++..+..+.|+
T Consensus 3 ~~VGI~~i~~y~p~~~v~~~~La~~~---g~d~---------~K~~~glgq~~~av~~~~ED------------------ 52 (174)
T PF01154_consen 3 QNVGIDAIEFYIPRYYVDQEELAEAR---GVDP---------GKYTIGLGQEKMAVPPPDED------------------ 52 (174)
T ss_dssp SSEEEEEEEEE-ESEEEEHHHHHHHT---TS-T---------CHHHTTT--SEEEE--TTS-------------------
T ss_pred ccccEeEEEEecCceEecHHHHHHHh---CCCH---------HHhhhhcCeeEEEeCCCccc------------------
Confidence 47999999999999999999998762 2221 45666788888888888774
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC--CccccceecCccchhHHHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLN--PSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~--~~~~~~~~i~~~C~~~~~aL 171 (395)
+..||+.|++++|++.++++++|+.|+++|.|. +...+.+.+|++.||+. ..+ +.+++.++|.|+..||
T Consensus 53 -------~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~-~~~e~k~ACygGTaAL 124 (174)
T PF01154_consen 53 -------IVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDC-RGVEMKQACYGGTAAL 124 (174)
T ss_dssp -------HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSS-EEEEEESGGGHHHHHH
T ss_pred -------HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCce-eeeehhhhhHHHHHHH
Confidence 899999999999999999999999999999999 88889999999999994 333 4789999999999999
Q ss_pred HHHHHHHHcCC--CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCC
Q 016111 172 RMAKDFAENNP--GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANP 228 (395)
Q Consensus 172 ~~A~~ll~~g~--~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~ 228 (395)
+.|..++.++. .+++|||++|..... +.. ....-|-||+|+||+++.
T Consensus 125 ~~a~~~v~s~~~~g~~aLVVasDiA~y~---~g~-------~e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 125 QNAVNWVASSPWDGRKALVVASDIARYD---LGS-------AEPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HHHHHHHCSTTSTTEEEEEEEEEEE--S---TTT-------TGGG-EEEEEEEEEECS-
T ss_pred HHHHHHHhcCCCCCCeEEEEeccccccC---CCC-------ccccccceeEEEEecCCC
Confidence 99999999984 679999999998741 211 145689999999999864
No 44
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.82 E-value=5.5e-19 Score=165.87 Aligned_cols=244 Identities=15% Similarity=0.172 Sum_probs=165.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+..+|+.+|+++||+++|++++|||++|+++...+ +..+..+++.||+ + +++++.+|+++..||.+|..++++
T Consensus 55 AeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI---P--a~dV~gACST~~~AL~lAa~lI~S 127 (337)
T PRK08304 55 AERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI---P--FLGLYGACSTMMESLALGSMLIDG 127 (337)
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC---c--EEEEeccCHHHHHHHHHHHHHHhc
Confidence 47899999999999999999999999999875323 3578899999997 2 789999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc---cCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccce
Q 016111 181 NPGARVLVVCSDLSLGT---FRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAG 257 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~---~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 257 (395)
|.+++|||++++..+.. |+.|.+.--+.+.+..+++|||+|+||++.... +...-.+.+.. +++
T Consensus 128 G~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~taqwtvtGAGA~i~~~~~~~-----~~i~~~t~Gkv--------~D~ 194 (337)
T PRK08304 128 GFADRVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAVLLSREGSG-----PRITHATIGKV--------VDL 194 (337)
T ss_pred CCCCEEEEEEcchhhhhhhhccCchhccccCCCcceEEeeccEEEEEecCCCC-----ceEEEEeEEEE--------Eec
Confidence 99999999999998753 665644322344568899999999999986542 22222222211 111
Q ss_pred EEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH--H
Q 016111 258 QFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH--V 331 (395)
Q Consensus 258 ~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~--~ 331 (395)
.+.+ -+.||.-.. ....+.|.+.|++.|.++ +|. .++.- ..+..+++.+.++-|++.++.+...- +
T Consensus 195 g~~d---~~nmgaaMa----pAa~dti~~h~~d~~~~~-~~yDli~tGDlg~vG~~i~~~ll~~~g~~~~~~~~DcG~~i 266 (337)
T PRK08304 195 GIKD---PNDMGAAMA----PAAADTIQQHFKDTGRSP-EDYDLIVTGDLGRVGREILKELLKEEGYDIGDNYNDCGLMI 266 (337)
T ss_pred CCCC---cccchhhhh----HHHHHHHHHHHHHcCCCh-hhccEEEEcchHHHHHHHHHHHHHHhCCChhhcccccCeEE
Confidence 1111 134443322 223356778899999997 888 55433 46778898888888887653322100 0
Q ss_pred H----H--hcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 332 L----S--EYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 332 ~----~--~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
+ + .-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 267 y~~~~q~~~aGgSGc~csa~v~~~~~~~~------~~~g~-~~rvl~v~tGaLls 314 (337)
T PRK08304 267 YDSEQQDVFAGGSGCACSAVVTYGYLLKE------LQKGK-LKRVLVVATGALLS 314 (337)
T ss_pred eccCCCcccCCCcccchhHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcC
Confidence 1 0 124444444444444 44543 33332 25899999997443
No 45
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.73 E-value=2e-16 Score=157.71 Aligned_cols=257 Identities=16% Similarity=0.171 Sum_probs=168.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC-C--------------------------CCCCHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG-V--------------------------DMPGADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~-~--------------------------~~p~~a~~l~~~Lg 149 (395)
....|+.+|+++||+++|++++++|. |+++++.+ + ..+..+.+|+..||
T Consensus 70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 149 (406)
T cd00834 70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence 46789999999999999999877663 55555432 1 22456789999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc---------------------cCCCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT---------------------FRGPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~---------------------~~~~~~~~~~~ 208 (395)
++.. .+.+..+|++++.||..|..+|++|.++++||+++|..+.. ...|.+ .
T Consensus 150 l~g~---~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~----~ 222 (406)
T cd00834 150 LRGP---NYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFD----K 222 (406)
T ss_pred CCCc---ccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCC----C
Confidence 9753 68899999999999999999999999999999999987610 011222 1
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHh
Q 016111 209 LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEA 287 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 287 (395)
...++++||||+|+||++.+.. ..+......+.+.+...... . . ..+ .. ....+.++++++
T Consensus 223 ~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~-~---~~~-------~~-----~~~~~~~~i~~a 284 (406)
T cd00834 223 DRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAY--H-I---TAP-------DP-----DGEGAARAMRAA 284 (406)
T ss_pred CCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCC--C-C---CCC-------CC-----CcHHHHHHHHHH
Confidence 2347899999999999985432 10011123343332111000 0 0 000 00 123455788999
Q ss_pred hccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
|+++|+++ +|| ++.+|..+... .+.+.+.++-..++++.+ ..-..+||+.+|+-++.|..++.. .+++.+.
T Consensus 285 l~~agi~~-~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip 361 (406)
T cd00834 285 LADAGLSP-EDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVS-STKSMTGHLLGAAGAVEAIATLLA-LRDGVLP 361 (406)
T ss_pred HHHcCCCH-HHCCEEecccccCccccHHHHHHHHHHhcccCCCCcee-CcchhhccchhhhhHHHHHHHHHH-HhcCCcC
Confidence 99999997 999 99999876543 334555565533344432 245778999999988888766532 1113221
Q ss_pred CC-----------------C----CCceEEEEEEccchhhhheee
Q 016111 362 TG-----------------E----GLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 ~G-----------------~----~~d~vll~~~G~G~s~~a~ll 385 (395)
+= + +..+++..+||.|.+-.+++|
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~g~gG~n~~~vl 406 (406)
T cd00834 362 PTINLEEPDPECDLDYVPNEAREAPIRYALSNSFGFGGHNASLVF 406 (406)
T ss_pred CCCCCCCCCCCCCccccCCCCccccccEEEEeeecCCceeeEEEC
Confidence 10 0 014677888998877776664
No 46
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.70 E-value=6.3e-16 Score=153.10 Aligned_cols=252 Identities=16% Similarity=0.153 Sum_probs=167.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCC-ccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNP-SVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~-~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +..|..+..++..||++. .+ +++++++|++++.+|.+|.++|
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~--~~~v~~~c~s~~~al~~A~~~I 98 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVP--ATTVNRVCGSGLQAVALAAQSI 98 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc--hhhhccccHHHHHHHHHHHHHH
Confidence 3899999999999999999999999999988776 556777888999999985 43 7899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccccc-----------CC--------CCCC-C---------------------ch----------
Q 016111 179 ENNPGARVLVVCSDLSLGTF-----------RG--------PSDA-N---------------------LG---------- 207 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~~-----------~~--------~~~~-~---------------------~~---------- 207 (395)
++|.+++|||+++|++|..- .+ |... . ++
T Consensus 99 ~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~ 178 (386)
T cd00751 99 AAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSH 178 (386)
T ss_pred HCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 99999999999999875310 00 0000 0 00
Q ss_pred -----hh-----------------------------------------------------hhhhhhccccEEEEEecCCC
Q 016111 208 -----CL-----------------------------------------------------AGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 208 -----~~-----------------------------------------------------~~~~~fGDgAaA~vl~~~~~ 229 (395)
++ .....++|||+|+||.+.+.
T Consensus 179 ~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~ 258 (386)
T cd00751 179 QRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEK 258 (386)
T ss_pred HHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHH
Confidence 00 00112246666666665432
Q ss_pred C-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCC
Q 016111 230 T-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGG 307 (395)
Q Consensus 230 ~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~ 307 (395)
. ..+..+...+...+... + +... .......+++++++++|+++ +|| ++-+|-..
T Consensus 259 a~~~~~~~~~~I~g~~~~~--------------~------~~~~---~~~~~~~a~~~a~~~Agi~~-~did~~e~~d~f 314 (386)
T cd00751 259 AKELGLKPLARIVGYAVAG--------------V------DPAI---MGIGPVPAIPKALKRAGLTL-DDIDLIEINEAF 314 (386)
T ss_pred HHHCCCCeeEEEEEEEEcc--------------C------CCcc---cchhHHHHHHHHHHHcCCCH-HHcCEEEeechh
Confidence 1 00001112233222110 0 0000 01122468889999999997 999 88888776
Q ss_pred hHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 308 ~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
........+.||+....+..+ --.-.+||...++-...+.++..+.. |+ .+ .+.|....|+|..-++++++
T Consensus 315 ~~~~~~~~e~lg~~~~pvn~~-GG~l~~Gh~~gasG~~~~~e~~~qL~--g~--~~---~~gl~~~~~~gg~g~~~~ie 385 (386)
T cd00751 315 AAQALACLKELGLDPEKVNVN-GGAIALGHPLGASGARIVVTLLHELK--RR--GG---RYGLATMCIGGGQGAAMVIE 385 (386)
T ss_pred HHHHHHHHHHhCCChhhcCCC-cchHhhCccHHHHHHHHHHHHHHHHH--hc--CC---CEEEEEEcccccceEEEEEE
Confidence 655556678899876444432 13446899999998888888777521 21 22 56666666677666677775
No 47
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.69 E-value=1e-15 Score=153.52 Aligned_cols=262 Identities=14% Similarity=0.139 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CC-------------------CCCHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VD-------------------MPGADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~-------------------~p~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+|+++||+++|+++++|| .|++++.++ |. .+..+.+++..||+...
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g~--- 162 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRGP--- 162 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCCC---
Confidence 4567999999999999999999999 888887654 21 34567889999999763
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------cCCCCCC--CchhhhhhhhhccccEEEEE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------FRGPSDA--NLGCLAGQALFGDGAAALII 224 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~~~~~~~--~~~~~~~~~~fGDgAaA~vl 224 (395)
++.+..+|++++.||.+|..+|++|..+.+||+++|..... +..++.. ..+....++++||||+|+||
T Consensus 163 ~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~~g~~~geGAaalVL 242 (424)
T smart00825 163 SVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADADGYVRGEGVGVVVL 242 (424)
T ss_pred ccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCCCcccccceEEEEEE
Confidence 68899999999999999999999999999999999974320 1111100 01112347899999999999
Q ss_pred ecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEE
Q 016111 225 GANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWI 302 (395)
Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i 302 (395)
++.+.. ..+.....++...+......... .. .+ ....+..+++++|+++|+++ +|| ++.
T Consensus 243 e~~e~A~~~g~~i~a~I~g~~~~~~~~~~~-----~~--------~~-----~~~~~~~a~~~al~~Agl~~-~dId~i~ 303 (424)
T smart00825 243 KRLSDALRDGDPILAVIRGSAVNQDGRSNG-----LT--------AP-----SGPAQARLIRQALARAGVDP-ADVDYVE 303 (424)
T ss_pred ccHHHHHHCCCeEEEEEEEEEEeCCCCCCC-----CC--------Cc-----CHHHHHHHHHHHHHHhCCCH-HHccEEE
Confidence 975431 10011123344332211100000 00 00 01234568899999999997 999 888
Q ss_pred EcCCChH-----HHHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-------------
Q 016111 303 VQPGGPA-----IVNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT------------- 361 (395)
Q Consensus 303 ~hq~~~~-----~~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~------------- 361 (395)
+|-.+.. -.+.+.+.++... .+++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 304 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~~~-l~~~~ip~~~~~~~~~~~~~ 381 (424)
T smart00825 304 AHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLG-SVKSNIGHLEAAAGVAGLIKVVLA-LRHGTIPPTLHFETPNPHID 381 (424)
T ss_pred eeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEe-ccccccCCcccchhHHHHHHHHHH-HhCCCCCCCCCCCCCCCCCC
Confidence 9954432 2345566665421 223222 134557999999988888665421 0112110
Q ss_pred -------------C---CCCCceEEEEEEccchhhhheeee
Q 016111 362 -------------T---GEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 362 -------------~---G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+ +...+.++..+||-|...++++|+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~ 422 (424)
T smart00825 382 LEESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILE 422 (424)
T ss_pred cccCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEe
Confidence 0 001267888999988888888876
No 48
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.69 E-value=1.1e-15 Score=151.27 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=85.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++++|+++|+++++||.||++++++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~-p~~~V~~~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSV-PAMTLNKVCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCc-ceEEecccchhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876 45667788899999998632 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999997764
No 49
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.67 E-value=4.1e-15 Score=139.06 Aligned_cols=247 Identities=17% Similarity=0.189 Sum_probs=161.2
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
|++...+|+.+|+++||+++|++++|||+++.++.+....|+ ..+++.||++ .+.+.++|+++..||.+|..+
T Consensus 50 wEkAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP-----~~gV~gACSTg~eAL~lAa~~ 122 (334)
T PRK12404 50 YEKAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP-----YLGLFGACSTSMEGLALAALI 122 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC-----ccceeecCHHHHHHHHHHHHH
Confidence 344678999999999999999999999999999887545554 5999999954 578999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 178 AENNPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
+++|.+++||++++-.+.. .|+.|.+.--+.+.+...---||+|+||++.... +...-.+.+..
T Consensus 123 VaSG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~taqwTvTgaga~~l~~~~~~-----~~i~~~T~Gkv-------- 189 (334)
T PRK12404 123 VNSGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPPTAQWTVTGAGAAILSKTGDG-----PRVTSATIGRV-------- 189 (334)
T ss_pred HHcCCCCEEEEEeCcccchhhhhccCcccccCcCCCcccEEEEceEEEEEecCCCC-----ceEEEEEEEEE--------
Confidence 9999999999999988652 3555654322223345556679999999986432 22222222211
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCc-cchhHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQ-QKLSATR 329 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~-e~~~~~~ 329 (395)
+++.+.+ -+.||.-... ...+.|.+.|++.|.++ +|. .++-- ..+.++++.+.++-|++. ++.+...
T Consensus 190 ~D~g~~d---~~nMGaaMAP----AA~dti~~h~~d~~~~~-~~yDlI~TGDLg~vG~~i~~~ll~~~g~~~~~~~~~DC 261 (334)
T PRK12404 190 VDMGLTD---PFNMGGAMAP----AAVDTIEAHLRDRQIDA-SYYDLIVTGDLGHVGREIAKDLLHKHGVKVPEEQFQDC 261 (334)
T ss_pred EecCCCC---cccchhhhhH----HHHHHHHHHHHHhCCCh-hhccEEEEcchHHHHHHHHHHHHHHcCCCCCccccccc
Confidence 1111111 1344433222 23356778899999997 888 55433 467788888888877765 3221100
Q ss_pred H--HH---H--hcCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 330 H--VL---S--EYGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 330 ~--~~---~--~~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
- ++ + .-|-.|++..-..+. +++++ ++.|+ ..+||+++.|+=+|
T Consensus 262 G~~iyd~~~~~~aGgSGcgcsA~v~~g~~~~~------~~~g~-~~rvL~v~TGALlS 312 (334)
T PRK12404 262 GLLIYREGQPVIAGASGPGCSATVTYGHLLNR------MKRGE-LKRILVVATGALLS 312 (334)
T ss_pred CeEEecCCCcccCCCcccchHHHHHHHHHHHH------HhcCC-ceEEEEEEchhhcC
Confidence 0 00 1 123444444444444 44544 33332 25899999997443
No 50
>PRK09051 beta-ketothiolase; Provisional
Probab=99.67 E-value=3.5e-15 Score=147.66 Aligned_cols=95 Identities=14% Similarity=0.059 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +.. +..+..+...+|++... ++++++.+|++++.|+.+|.++|
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET-PAFNVNRLCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC-ceEEecccchHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999887 433 34566677778997432 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.|||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999998874
No 51
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.66 E-value=2.1e-15 Score=149.14 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=84.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||+++.++ +..|..+..++..+|++... ++++++.+|++++.+|..|.++|+
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~-~~~~v~~~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESV-PAYTVNRQCASGLQAVILAAQLIR 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCc-eeeeecchhhHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999988776 54577788999999998522 278999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.+++|||+++|+++.
T Consensus 99 sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 99 AGEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998653
No 52
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.64 E-value=6e-15 Score=145.87 Aligned_cols=94 Identities=15% Similarity=0.086 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPG-ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~-~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|++++|+++|+++++||.||++++++ ...|+ .+..++..+|++... ++++++.+|+|++.||.+|.++|+
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~-p~~~V~~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTV-PGMTVNRFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999887 54454 888999999998543 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999874
No 53
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.64 E-value=1.1e-14 Score=144.35 Aligned_cols=252 Identities=17% Similarity=0.167 Sum_probs=167.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C--CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V--DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~--~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++|+++++||.||++++++ . ..|..+..++..||++..+ ++.++.+|++++.+|..|..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAPIP--ATRVEAACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCCCC--eeEEeCCcHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988766 3 2467789999999998544 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccccc----------------CCCCCCCc-----------------------------------
Q 016111 178 AENNPGARVLVVCSDLSLGTF----------------RGPSDANL----------------------------------- 206 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~~----------------~~~~~~~~----------------------------------- 206 (395)
|++|.+++|||+++|.++... ..|.....
T Consensus 99 I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~ 178 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSK 178 (389)
T ss_pred HHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhh
Confidence 999999999999999765310 00100000
Q ss_pred ------------------------hhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEec
Q 016111 207 ------------------------GCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFRE 261 (395)
Q Consensus 207 ------------------------~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 261 (395)
-.......++|||+|+||++.+.. ..+. ....+.+.+....+.. +..
T Consensus 179 np~a~~~~~~t~~~~~~s~~i~~Pl~~~d~~~~~dGAaa~vL~s~~~A~~~~~-~~v~I~g~g~~~~~~~-------~~~ 250 (389)
T PRK06064 179 NPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITDGAAAVILASEEKAKEYTD-TPVWIKASGQASDTIA-------LHD 250 (389)
T ss_pred CcHhhhCCCCCHHHHhcCCcccCCCchhhcCCCCCcceEEEEecHHHHHHhcC-CCeEEEEEEEecCccc-------ccc
Confidence 000112256999999999975431 1101 1234554432211100 000
Q ss_pred CceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------c
Q 016111 262 MGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------K 324 (395)
Q Consensus 262 ~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~ 324 (395)
.+.+. .......+++++|+++|+++ +|| ++-+|-......-...+.||+.+. +
T Consensus 251 -------~~~~~--~~~~~~~a~~~al~~aGi~~-~did~~e~~d~ft~~~~~~~e~lgl~~~G~~~~~~~~g~~~~~g~ 320 (389)
T PRK06064 251 -------RKDFT--TLDAAVVAAEKAYKMAGIEP-KDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGD 320 (389)
T ss_pred -------ccccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEEecCCCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCC
Confidence 00000 01123467889999999997 999 888998877776677889998542 2
Q ss_pred hhHHH-HHHHhcCCCccchHHHHHHHHHHhhhhcCCc------cCCCCCceEEEEEEcc
Q 016111 325 LSATR-HVLSEYGNMGGVSVFFILDEIRRKSAEEGKV------TTGEGLEWGVMFGIGA 376 (395)
Q Consensus 325 ~~~~~-~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i------~~G~~~d~vll~~~G~ 376 (395)
++.|. --.-.+||...++-...+.++..+.. |+- -+| .++.+..++|.
T Consensus 321 ~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~--g~a~~g~rqv~~--a~~~l~~~~g~ 375 (389)
T PRK06064 321 IPVNPSGGLKAKGHPVGATGVSQAVEIVWQLR--GEAEKGRQQVIG--AGYGLTHNVGG 375 (389)
T ss_pred eeecCCCCcccCCCCcchhHHHHHHHHHHHHh--CCCCCCCccCCC--ccEEEEecCCC
Confidence 22220 00224899999988888888766522 221 123 26777777774
No 54
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.62 E-value=2.2e-14 Score=141.79 Aligned_cols=95 Identities=12% Similarity=0.056 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.||+++.++ ... +..+......+|++... ++++++.+|+|++.||.+|.++|
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~-pa~~Vn~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETV-PGVQINRFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCC-CeEEEcchhhhHHHHHHHHHHHH
Confidence 3889999999999999999999999999999987 333 34566677888996543 48999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|++++|++|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999885
No 55
>PRK05790 putative acyltransferase; Provisional
Probab=99.62 E-value=2.7e-14 Score=141.75 Aligned_cols=254 Identities=18% Similarity=0.141 Sum_probs=168.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..+|++... ++++++.+|++++.||..|.++|+
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~v~~~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEV-PALTINKVCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCC-ceeeecccchHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999988766 33444556677788987422 278999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccccC-----------------C------CCCC---C----------------ch----------
Q 016111 180 NNPGARVLVVCSDLSLGTFR-----------------G------PSDA---N----------------LG---------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~~-----------------~------~~~~---~----------------~~---------- 207 (395)
+|.+++|||+++|.+|.... + +.+. . ++
T Consensus 104 sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~ 183 (393)
T PRK05790 104 AGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQ 183 (393)
T ss_pred cCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999998642100 0 0000 0 00
Q ss_pred ----h-hh------------------------------------------------------hhhhhccccEEEEEecCC
Q 016111 208 ----C-LA------------------------------------------------------GQALFGDGAAALIIGANP 228 (395)
Q Consensus 208 ----~-~~------------------------------------------------------~~~~fGDgAaA~vl~~~~ 228 (395)
. +. ....++|||+|+||++.+
T Consensus 184 ~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e 263 (393)
T PRK05790 184 QKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEA 263 (393)
T ss_pred HHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHH
Confidence 0 00 122446777777777643
Q ss_pred CC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCC
Q 016111 229 DT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPG 306 (395)
Q Consensus 229 ~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~ 306 (395)
.. ..+..+..++.+.+..... .... ......+++++++++|+++ +|| ++-+|-.
T Consensus 264 ~a~~~~~~~~~~I~g~~~~~~~--------------------~~~~---~~~~~~a~~~a~~~Agi~~-~did~~e~~d~ 319 (393)
T PRK05790 264 KAKELGLTPLARIVSYAVAGVD--------------------PAIM---GIGPVPAIRKALEKAGWSL-ADLDLIEINEA 319 (393)
T ss_pred HHHHCCCCeeEEEEEEEEccCC--------------------CCcc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCcH
Confidence 21 0001111234333221000 0000 0112357889999999997 999 7777776
Q ss_pred ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 307 GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 307 ~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
-....-...+.||+...++..+ --.-.+||..+|+-...+.++.++.. + +.+ .+.|....|+|..-++++|+
T Consensus 320 f~~~~l~~~e~lg~~~~pvN~~-GG~l~~Ghp~gatG~~~~~e~~~qL~--~--~~~---~~gl~~~~~~~g~g~~~~~e 391 (393)
T PRK05790 320 FAAQALAVEKELGLDPEKVNVN-GGAIALGHPIGASGARILVTLLHEMK--R--RGA---KKGLATLCIGGGQGVALIVE 391 (393)
T ss_pred HHHHHHHHHHHhCCChhhcCCC-cchhhhCcchhhhHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEEE
Confidence 5444555678899876665443 24566899999999998888887621 1 122 46677777777777778877
Q ss_pred e
Q 016111 387 S 387 (395)
Q Consensus 387 ~ 387 (395)
.
T Consensus 392 ~ 392 (393)
T PRK05790 392 R 392 (393)
T ss_pred c
Confidence 5
No 56
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.62 E-value=2.1e-14 Score=134.58 Aligned_cols=309 Identities=17% Similarity=0.183 Sum_probs=193.8
Q ss_pred CeEEEeeeeeCCCcccccccHHHHHHhhccCCchhHHHHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHH
Q 016111 16 LATILAIGTANPPNCIYQADYPDYYFRVTNSDHMTLLKQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQ 95 (395)
Q Consensus 16 ~~~I~gig~~lP~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (395)
+++|.++..|+|.+.|++++++..- +.+. .++---.|..+--|+.+.|
T Consensus 11 dvGI~aieiyfP~~yV~Q~elEk~d---~vs~---------gKytIGLGq~~MgfcsdrE-------------------- 58 (462)
T KOG1393|consen 11 DVGIIAIEIYFPSQYVDQEELEKFD---GVSA---------GKYTIGLGQTQMGFCSDRE-------------------- 58 (462)
T ss_pred ccceeEEEEEcCccccChhhHhhcC---Cccc---------cceEeccCcceecccCchh--------------------
Confidence 8999999999999999999997652 2121 1222123333333554444
Q ss_pred HHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcC--CCCccccceecCccchhHHHHHH
Q 016111 96 DILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLG--LNPSVKRVMLYFQGCYIGATAIR 172 (395)
Q Consensus 96 ~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lg--l~~~~~~~~~i~~~C~~~~~aL~ 172 (395)
....|+..+..+++++-+++++.|+-|-++|.|- .-..+.-..|.+.++ -..+.. -.|..++|.|+..||-
T Consensus 59 -----Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIE-GiDttnACYGGtaALf 132 (462)
T KOG1393|consen 59 -----DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIE-GIDTTNACYGGTAALF 132 (462)
T ss_pred -----hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccc-cccccccccccHHHHH
Confidence 2778999999999999999999999999999986 555566666776666 343443 6788999999999999
Q ss_pred HHHHHHHcC--CCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeee--eee-
Q 016111 173 MAKDFAENN--PGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGA--QTI- 247 (395)
Q Consensus 173 ~A~~ll~~g--~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~--~~~- 247 (395)
.|-.++.+. ..+.+|||++|..-.. ..+ ....=|-||.|++|+++..-.+ + ..++..+.. ..+
T Consensus 133 navnWiESssWDGr~aivV~gDIAvY~-~G~---------aRpTGGAgAVAmLIgPnApi~f-e-rglr~thM~hayDFy 200 (462)
T KOG1393|consen 133 NAVNWIESSSWDGRYAIVVCGDIAVYA-KGN---------ARPTGGAGAVAMLIGPNAPIIF-E-RGLRATHMQHAYDFY 200 (462)
T ss_pred HHhhhhhhcccCCceeEEEEeeEEEec-CCC---------CCCCCCcceEEEEEcCCCceEe-c-ccchhhhhhhhhhcc
Confidence 999999987 4889999999997631 111 1234589999999999765211 0 011110000 001
Q ss_pred cCCCcCccceEEecCceEEEeCchhHHHHHHHH--------HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-HHH-
Q 016111 248 LPGSDSDVAGQFREMGLTVHLSKNVATVVSENI--------EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-IEA- 316 (395)
Q Consensus 248 ~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~--------~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-i~~- 316 (395)
-|.-.. .+.-.+| +.-...+...+ .++.++-.+.-+... ++. ++++|.+--++.+. +++
T Consensus 201 KPdl~S---EyPvVDG------klSi~cYl~Ald~cY~~~~kK~~~~~~~~~~~~l-~~fdy~ifHsP~cKlvqKs~arl 270 (462)
T KOG1393|consen 201 KPDLLS---EYPVVDG------KLSIQCYLSALDRCYTVYRKKIAAQWQKSGSDNL-NSFDYIIFHSPYCKLVQKSLARL 270 (462)
T ss_pred CCCCCC---cCceecC------eehHHHHHHHHHHHHHHHHHHHHHHhccccCccc-ccCCeEEEeCchhhhHHHHHHHh
Confidence 121100 0011122 22222222222 222233333334453 677 88999876655443 111
Q ss_pred ----------------------------------------HcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 317 ----------------------------------------KLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 317 ----------------------------------------~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
...+-.+|+-.+...-.+.||++++|+...|..++.....
T Consensus 271 ~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~sll~~~~~ 350 (462)
T KOG1393|consen 271 LYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLASLLSAVPA 350 (462)
T ss_pred hhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHHHHHhccch
Confidence 0111112222221112478999999999999999886211
Q ss_pred cCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 357 EGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 357 ~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.--.| .+|.+.++|+|++.+..-+|+.+
T Consensus 351 --d~l~G---krig~FSYGSGlAAs~fs~~v~~ 378 (462)
T KOG1393|consen 351 --DELAG---KRIGMFSYGSGLAASMFSLRVTQ 378 (462)
T ss_pred --hhhhc---cEEEEEeecCcchhheEEEEecC
Confidence 11246 79999999999999888888875
No 57
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.62 E-value=3.9e-14 Score=139.87 Aligned_cols=232 Identities=17% Similarity=0.105 Sum_probs=160.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|+++++.+ ...+..+..++..||++..+ ++.++.+|++++.+|..|.++|+
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~~~~--~~~v~~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLLGKP--ATRVEAAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCCCcc--eeeEeCccHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999988766 44577889999999997543 78899999999999999999999
Q ss_pred cCCCCeEEEEEeecccccc-----C----C-------CCC-CCch-----------------------------------
Q 016111 180 NNPGARVLVVCSDLSLGTF-----R----G-------PSD-ANLG----------------------------------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~-----~----~-------~~~-~~~~----------------------------------- 207 (395)
+|.++.|||+++|.++... . + +.. ....
T Consensus 93 sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~n 172 (375)
T cd00829 93 SGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARN 172 (375)
T ss_pred hCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999876420 0 0 000 0000
Q ss_pred ------------------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 208 ------------------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 208 ------------------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
.......++|||+|+||.+.+.. .. ..+...+.+.+....+... +. .+
T Consensus 173 p~A~~~~~~t~d~~~~~~~i~~pl~~~~~~~~~DGaaa~vl~s~~~a~~~-~~~~~~i~g~~~~~~~~~~----~~--~~ 245 (375)
T cd00829 173 PYAQFRKPITVEDVLNSRMIADPLRLLDCCPVSDGAAAVVLASEERAREL-TDRPVWILGVGAASDTPSL----SE--RD 245 (375)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceeEEEEecHHHHhhc-CCCCeEEEEEEEecCCccc----cc--cc
Confidence 00012346999999999976431 11 1123444443322111000 00 00
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc--c----------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ--Q---------------- 323 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~--e---------------- 323 (395)
.+ ........+++++|+++|+++ +|| ++=+|-......-...+.||+.+ +
T Consensus 246 --------~~--~~~~~~~~a~~~al~~Agl~~-~did~~ei~d~F~~~~l~~~e~lGl~~~g~~~~~~~~g~~~~~G~~ 314 (375)
T cd00829 246 --------DF--LSLDAARLAARRAYKMAGITP-DDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDTAIGGDL 314 (375)
T ss_pred --------cc--cccHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCc
Confidence 00 012233468899999999997 999 88899888788888889999976 3
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ --+-.+||...++-...+.++.++
T Consensus 315 pvN~~-GG~la~Ghp~gatG~~~~~e~~~q 343 (375)
T cd00829 315 PVNTS-GGLLSKGHPLGATGLAQAVEAVRQ 343 (375)
T ss_pred cccCC-CchhcCCCCccHHHHHHHHHHHHH
Confidence 22221 123347999999888887777664
No 58
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.61 E-value=2.6e-14 Score=141.58 Aligned_cols=95 Identities=16% Similarity=0.056 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC-CCCCCHHHH-HHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG-VDMPGADYQ-LTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~-~~~p~~a~~-l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++ |++++|||.||++++++ ...+....+ +...+|++... ++++++.+|++++.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSV-GGVTVNRFCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCC-ceeeecchhhHHHHHHHHHHHH
Confidence 37899999999999997 99999999999998887 444555555 45556998533 3899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.|||+++|++|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998874
No 59
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.60 E-value=3.4e-14 Score=141.82 Aligned_cols=258 Identities=16% Similarity=0.163 Sum_probs=165.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC----------------------CC----CC-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG----------------------VD----MP-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~----------------------~~----~p-~~a~~l~~~Lg 149 (395)
....|+.+|++++|+++|++++++|. |++++..+ +. .+ ..+.++...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 35789999999999999999988885 66665321 00 11 24568999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCCCCchh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F----------RGPSDANLGC 208 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~~~ 208 (395)
+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + ..|.+ .
T Consensus 150 l~g~---~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd----~ 222 (407)
T TIGR03150 150 AKGP---NHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFD----K 222 (407)
T ss_pred CCCc---ccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCc----C
Confidence 9754 67889999999999999999999999999999999973210 0 01111 1
Q ss_pred hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHh
Q 016111 209 LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEA 287 (395)
Q Consensus 209 ~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~ 287 (395)
...++++||||+|+||++.+.. ..+.....++.+.+....... .. .+. . ......++++++
T Consensus 223 ~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~---~~---~~~-------~-----~~~~~~~ai~~A 284 (407)
T TIGR03150 223 DRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYH---IT---APA-------P-----EGEGAARAMRAA 284 (407)
T ss_pred CCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCC---CC---CCC-------C-----CcHHHHHHHHHH
Confidence 1246889999999999976531 100111233433322110000 00 000 0 012344788899
Q ss_pred hccCCCCCCCce-EEEEcCCCh-----HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 288 FSPFGIKDWNSL-FWIVQPGGP-----AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 288 L~~~gl~~~~di-~~i~hq~~~-----~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
|+++|+++ +|| ++..|-.+. .-...+.+.++-...+++.+ ..-..+||+.+|+-.+.|...+.. .+++.+-
T Consensus 285 l~~Agi~~-~dId~ve~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~~~~~~~-l~~~~ip 361 (407)
T TIGR03150 285 LKDAGINP-EDVDYINAHGTSTPLGDKAETKAIKRVFGDHAYKLAVS-STKSMTGHLLGAAGAIEAIFTVLA-IRDGVVP 361 (407)
T ss_pred HHHcCCCH-hHCCEEeCcCCCCCCCCHHHHHHHHHHhccCCCCCcee-CCcchhchhHHHHHHHHHHHHHHH-HhcCCcC
Confidence 99999997 999 888997665 33455667777543344432 134567999988887777665432 1112111
Q ss_pred C--------------------CC-CCceEEEEEEccchhhhheeee
Q 016111 362 T--------------------GE-GLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 362 ~--------------------G~-~~d~vll~~~G~G~s~~a~ll~ 386 (395)
| +. +..+++..+||.|.+-.+++|+
T Consensus 362 p~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfgG~n~~~vl~ 407 (407)
T TIGR03150 362 PTINLDNPDPECDLDYVPNEARERKIDYALSNSFGFGGHNASLVFK 407 (407)
T ss_pred CCCCCCCCCCCCCccccCCCCccCCcCEEEEecccCCCceEEEEeC
Confidence 1 10 1146788889988888777764
No 60
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=8.2e-14 Score=137.97 Aligned_cols=233 Identities=15% Similarity=0.044 Sum_probs=157.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ ...+..+..++..||++..+ .++++.+|++++.||..|..+|+
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~--~~~v~~~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV--PLRVEAMCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCCCC--eeEEeccCHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988776 22234478899999998765 68999999999999999999999
Q ss_pred cCCCCeEEEEEeeccccc----------------cC-CCCC---C-----------------------------------
Q 016111 180 NNPGARVLVVCSDLSLGT----------------FR-GPSD---A----------------------------------- 204 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~----------------~~-~~~~---~----------------------------------- 204 (395)
+|.+++|||+++|.+|.. +. .|.. .
T Consensus 98 sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~n 177 (385)
T PRK12578 98 SGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMN 177 (385)
T ss_pred CCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcC
Confidence 999999999999986521 00 0000 0
Q ss_pred ---------------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 205 ---------------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 205 ---------------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
++-.......++|||+|+||.+++.. ..+..+...+.+.+....+.. +...
T Consensus 178 p~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~A~~l~~~~~~~I~g~g~~~~~~~-----~~~~-- 250 (385)
T PRK12578 178 PKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFASEEKVKELKIDSPVWITGIGYANDYAY-----VARR-- 250 (385)
T ss_pred ChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEecHHHHHhcCCCCCeEEEEEEEecCccc-----cccc--
Confidence 00011223456799999999875421 110012344544432211110 0000
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------------------ 323 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------------------ 323 (395)
+++.. ......+++++|+++|+++ +|| ++-+|-....+--...+.||+.+.
T Consensus 251 -------~~~~~--~~~~~~a~~~al~~Agi~~-~DiD~~ei~d~ft~~~l~~le~lGl~~~G~~~~~~~~G~~~~~G~~ 320 (385)
T PRK12578 251 -------GEWVG--FKATQLAARQAYNMAKVTP-NDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKV 320 (385)
T ss_pred -------ccccc--cHHHHHHHHHHHHHcCCCH-HHCCEEEecCcChHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCe
Confidence 01110 1123467889999999997 999 888998887777777889998652
Q ss_pred chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 ~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ -=+-.+||...++-...+.++..+
T Consensus 321 pvN~~-GG~la~GhP~gatG~~~v~e~~~q 349 (385)
T PRK12578 321 GVNLF-GGLKAKGHPLGATGLSMIYEITKQ 349 (385)
T ss_pred eeCCC-CCcccCCCCccHHHHHHHHHHHHH
Confidence 22211 113447999988888888887665
No 61
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.60 E-value=2.9e-14 Score=141.13 Aligned_cols=95 Identities=14% Similarity=0.146 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++.++ ...+..+..++..+|++... ++++++.+|++++.||..|.++|+
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEV-QTETVNKVCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999998876 22445566789999997433 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.|||+++|++|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999874
No 62
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.60 E-value=4.7e-14 Score=140.84 Aligned_cols=256 Identities=14% Similarity=0.118 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC-cC----EEEEEecCC-----------------------CCC--CCHHHHHHHHcCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQ-IT----HLIFCSLVG-----------------------VDM--PGADYQLTKMLGL 150 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~-Id----~vi~~s~t~-----------------------~~~--p~~a~~l~~~Lgl 150 (395)
....|+..|+++||+++|+++++ ++ .+++++..+ ... ...+.+|+..+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 36789999999999999998766 43 455555421 111 4567899999999
Q ss_pred -CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------c----------cCCCCCCCchhh
Q 016111 151 -NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------T----------FRGPSDANLGCL 209 (395)
Q Consensus 151 -~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~----------~~~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|..+.+||+++|..+. . ...|.+ ..
T Consensus 151 ~~Gp---~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd----~~ 223 (407)
T cd00828 151 SHGP---IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFD----ET 223 (407)
T ss_pred CCCC---CcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCc----CC
Confidence 653 6889999999999999999999999999999999998651 0 011222 12
Q ss_pred hhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+... .+....-++...+....... .. ... -.+.+.++++++|
T Consensus 224 ~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~--------------~~-~~~----~~~~~~~a~~~Al 284 (407)
T cd00828 224 RDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAG--------------RS-VPA----GGKGIARAIRTAL 284 (407)
T ss_pred CCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCC--------------CC-CCC----ChHHHHHHHHHHH
Confidence 3589999999999999864311 00111223333221111000 00 000 1234567899999
Q ss_pred ccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+++ +|| ++..|-.+... .+.+.+.++-..+.++.+ .+-..+||+.+|+-++.|...+.. .+++.+.|
T Consensus 285 ~~Agi~~-~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~-s~K~~~Gh~~~Asg~~~l~~~~~~-l~~~~ipp 361 (407)
T cd00828 285 AKAGLSL-DDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVT-AQKALFGHSKGAAGALQLIGALQS-LEHGLIPP 361 (407)
T ss_pred HHcCCCH-HHcCEEecccccCccccHHHHHHHHHHHhccCCCceee-cccchhccchhhhhHHHHHHHHHH-HhcCccCC
Confidence 9999997 999 88999655433 233444454321222221 146889999999999888765432 11132211
Q ss_pred C-----------------C----C--CceEEEEEEccchhhhheee
Q 016111 363 G-----------------E----G--LEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 363 G-----------------~----~--~d~vll~~~G~G~s~~a~ll 385 (395)
= . + ..+++..+||.|.+-+++++
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfgG~n~~lv~ 407 (407)
T cd00828 362 TANLDDVDPDVEHLSVVGLSRDLNLKVRAALVNAFGFGGSNAALVL 407 (407)
T ss_pred CCCCCCCCcccccccccCcCccCCCCccEEEEecccCCCcceEEEC
Confidence 0 0 0 14678888998887777664
No 63
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.59 E-value=1.4e-13 Score=136.17 Aligned_cols=256 Identities=18% Similarity=0.191 Sum_probs=162.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD--MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~--~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|+++||+++|++++|||.|++++ ++ +. .+..+..+++.||+.+.+ +++++.+|+++..++..|.++
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~~~~--~~~v~~~casg~~al~~A~~~ 99 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGATGKP--LIRVHTAGSVGGSTAVVAASL 99 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCCCCc--eEEEeccCHHHHHHHHHHHHH
Confidence 3789999999999999999999999999887 34 21 122347899999998764 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-----------cC------------------------------------------CCC--
Q 016111 178 AENNPGARVLVVCSDLSLGT-----------FR------------------------------------------GPS-- 202 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~-----------~~------------------------------------------~~~-- 202 (395)
|++|.+++||||++|+.+.. |. +|.
T Consensus 100 I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~ 179 (386)
T PRK08313 100 VQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAH 179 (386)
T ss_pred HHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHh
Confidence 99999999999999975421 00 110
Q ss_pred --C--CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceE
Q 016111 203 --D--AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLT 265 (395)
Q Consensus 203 --~--~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~ 265 (395)
. .+ +-.......++|||+|+||.+.+.. ..+..+...+.+.+....+.. +..
T Consensus 180 ~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I~g~~~~~~~~~-------~~~---- 248 (386)
T PRK08313 180 LHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWIHGTAMRTEPLA-------FAG---- 248 (386)
T ss_pred cCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEEEEEEEEecCcc-------ccc----
Confidence 0 00 0011234456899999999876431 100112334444332211110 000
Q ss_pred EEeCchhHHHHHHHHHHHHHHhhccCCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------chh
Q 016111 266 VHLSKNVATVVSENIEKCLDEAFSPFGIK--DWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------KLS 326 (395)
Q Consensus 266 ~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~~~ 326 (395)
++.+ .......+++++++++|++ + +|+ .+=+|-..........+.||+.++ +++
T Consensus 249 ----~~~~--~~~~~~~a~~~a~~~Agi~~p~-~Did~~el~d~F~~~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~~p 321 (386)
T PRK08313 249 ----RDQV--NPQAGRDAAAALWKAAGITDPR-DEIDVAEIYVPFSWFEPMWLENLGFAPEGEGWKLTEAGETAIGGRLP 321 (386)
T ss_pred ----cccc--ccHHHHHHHHHHHHHcCCCCCh-hhCCEEEeccCChHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCcc
Confidence 0000 0112336788999999998 5 888 788888776777777899999765 222
Q ss_pred H--HHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc---c-CCCCCceEEEEEEccchhhhhe
Q 016111 327 A--TRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV---T-TGEGLEWGVMFGIGAGVTVDTV 383 (395)
Q Consensus 327 ~--~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i---~-~G~~~d~vll~~~G~G~s~~a~ 383 (395)
. +=..+. ||-..++-+..+.++.++.. |+. + ++ .+..+..+.|.+...+++
T Consensus 322 vN~~GG~l~--g~p~gatG~~~~~e~~~qlr--G~ag~rQv~~--a~~~l~~~~Gg~~~~~~~ 378 (386)
T PRK08313 322 VNPSGGVLS--SNPIGASGMIRFAEAALQVM--GKAGEHQVDG--ARKALGHAYGGGSQFFSM 378 (386)
T ss_pred ccCCCcccc--cCCCcHHHHHHHHHHHHHhc--ccccCCcCCC--ccEEEEeccCCcceEEEE
Confidence 2 101122 77655566777777665421 221 1 23 256777777643333333
No 64
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.58 E-value=6.4e-14 Score=139.31 Aligned_cols=95 Identities=16% Similarity=0.118 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.||++++++ +..|..+..++..+|++... ++++++.+|++++.|+..|.++|+
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~-p~~~V~~~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTV-PGMQLDRRCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCC-ceeehhhhhhHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999887 56677788999999998432 378999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.|||+++|++|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 104 TGAADVVIAGGAESMSN 120 (404)
T ss_pred cCCCCEEEEeeehhhcc
Confidence 99999999999998773
No 65
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.56 E-value=1.2e-13 Score=138.41 Aligned_cols=260 Identities=16% Similarity=0.141 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC------------------EEEEEec---------------CC-C-------CCCCH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT------------------HLIFCSL---------------VG-V-------DMPGA 140 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id------------------~vi~~s~---------------t~-~-------~~p~~ 140 (395)
...|+..|++++|+++|++.++++ .++.++. .+ + ..|..
T Consensus 75 ~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (425)
T PRK06501 75 SEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSI 154 (425)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHH
Confidence 456889999999999999644322 1222221 11 1 34568
Q ss_pred HHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec---------------ccccc------C
Q 016111 141 DYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL---------------SLGTF------R 199 (395)
Q Consensus 141 a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~---------------~s~~~------~ 199 (395)
+.+|+..+|++.. ++++..+|++++.||..|.++|++|.++.+||+++|. .+... .
T Consensus 155 a~~i~~~~gl~G~---~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 231 (425)
T PRK06501 155 ADRLADRFGTRGL---PISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKAS 231 (425)
T ss_pred HHHHHHHhCCCCC---ceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCccc
Confidence 8999999999764 6889999999999999999999999999999999994 12100 0
Q ss_pred CCCCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHH
Q 016111 200 GPSDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSE 278 (395)
Q Consensus 200 ~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 278 (395)
.|.+. + ..++++||||+|+||++.+... .+....-.+...+.. .+.... .... .. ..
T Consensus 232 rpfd~---~-r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~----~d~~~~--~~~~-------~~-----~~ 289 (425)
T PRK06501 232 KPFSK---D-RDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEK----ADSFHR--TRSS-------PD-----GS 289 (425)
T ss_pred CCCCC---C-CCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEc----cCCCCC--CCCC-------CC-----HH
Confidence 12221 2 2479999999999999854310 000111122222211 000000 0000 00 12
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
.+.++++++|+++|+++ +|| ++.+|-.+....+. +.+.++-...+++.+ ..-..+||+.+|+-.+.|...+.
T Consensus 290 ~~~~ai~~AL~~agi~p-~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~-s~k~~~Gh~~~AsG~~~~~~~~l 367 (425)
T PRK06501 290 PAIGAIRAALADAGLTP-EQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVS-SNKSMIGHTLTAAGAVEAVFSLL 367 (425)
T ss_pred HHHHHHHHHHHHcCCCH-HHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEE-CCCcccCCCchhhhHHHHHHHHH
Confidence 35678999999999997 999 99999876554433 345555322233321 13457799999998777754332
Q ss_pred hhhhcCCccC-----------------C----CCCceEEEEEEccchhhhheeeeecC
Q 016111 353 KSAEEGKVTT-----------------G----EGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 353 ~~~~~g~i~~-----------------G----~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
. .+++.+.| . .+.+.++.-+||.|..-++++|+..+
T Consensus 368 ~-l~~~~ipp~~n~~~~~~~~~~~~~~~~~~~~~~~~~l~ns~gfgG~n~~~vl~~~~ 424 (425)
T PRK06501 368 T-IQTGRLPPTINYDNPDPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424 (425)
T ss_pred H-HhcCcCCCcCCCCCCCCCCCcccCCCcccCCCCCEEEEeCccCCCeeEEEEEecCC
Confidence 1 11133221 0 01245778889999999999988654
No 66
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.56 E-value=8.7e-14 Score=137.99 Aligned_cols=95 Identities=19% Similarity=0.163 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++..+ +.....+......+|++... ++++++.+|++++.|+..|.++|+
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~-p~~~V~~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSV-GCTTVNKMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCc-cEeeccccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998776 33222333334445666433 389999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|++++|++|.
T Consensus 109 sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 109 AGSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCCEEEEEeeeccCC
Confidence 99999999999999873
No 67
>PRK06059 lipid-transfer protein; Provisional
Probab=99.55 E-value=2.7e-13 Score=134.89 Aligned_cols=92 Identities=20% Similarity=0.173 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|+++++||.||++++.+ +..+..+..++..||+++.+ +++++.+|++++.+|..|..+|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~--~~~v~~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAP--VSSSYAACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCc--eecccchhHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999887665 33345678999999997654 78999999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|..++|||+++|..+
T Consensus 101 sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 101 AGLCDVALVVGADTTP 116 (399)
T ss_pred CCCCCEEEEEEEcccC
Confidence 9999999999999865
No 68
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.54 E-value=1.2e-13 Score=138.33 Aligned_cols=224 Identities=15% Similarity=0.146 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCE----EEEEecCC-C-------------------CCCCHHHHHHHHcCCCCcccc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITH----LIFCSLVG-V-------------------DMPGADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~----vi~~s~t~-~-------------------~~p~~a~~l~~~Lgl~~~~~~ 156 (395)
....|+.+|+++||+++|+++++++. |++++..+ + ..+..+..++..+|+...
T Consensus 86 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g~--- 162 (421)
T cd00833 86 PQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGP--- 162 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCCC---
Confidence 45789999999999999999887774 77666533 1 113467889999999763
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------------cCCCCCCCchhhhhhhhhccccE
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------------FRGPSDANLGCLAGQALFGDGAA 220 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------------~~~~~~~~~~~~~~~~~fGDgAa 220 (395)
++.+..+|++++.||..|..+|++|.++.+||+++|..... ...|.+ ....++++||||+
T Consensus 163 ~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~----~~~~g~~~geGAa 238 (421)
T cd00833 163 SLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFD----ADADGYVRGEGVG 238 (421)
T ss_pred ceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCC----CCCCCeeeeceEE
Confidence 68899999999999999999999999999999999985310 011222 1224789999999
Q ss_pred EEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce
Q 016111 221 ALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL 299 (395)
Q Consensus 221 A~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di 299 (395)
|+||++.+.. ..+.....++...+......... . ..+ ....+.++++++|+++|+++ +||
T Consensus 239 alvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~-----~--------~~p-----~~~~~~~a~~~al~~Agi~~-~di 299 (421)
T cd00833 239 VVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKG-----I--------TAP-----SGEAQAALIRRAYARAGVDP-SDI 299 (421)
T ss_pred EEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCC-----C--------cCC-----CHHHHHHHHHHHHHHhCCCH-HHC
Confidence 9999975432 10011122333322111000000 0 000 12345678899999999997 999
Q ss_pred -EEEEcCCChHH-----HHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 300 -FWIVQPGGPAI-----VNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 300 -~~i~hq~~~~~-----~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
++.+|-.+... .+.+.+.++-.. .+++.+ ..-..+||+.+|+-++.|...+
T Consensus 300 d~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~-s~k~~~Gh~~~aag~~~l~~~~ 359 (421)
T cd00833 300 DYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIG-SVKSNIGHLEAAAGLAGLIKVV 359 (421)
T ss_pred cEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeee-cCcCccccchhhhHHHHHHHHH
Confidence 88899765332 344455554321 122221 1345689999999888776543
No 69
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.54 E-value=3.1e-13 Score=135.13 Aligned_cols=262 Identities=16% Similarity=0.160 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------V----DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lgl 150 (395)
...|+..|+++||+++|++++++| .|+++++.. + ..+ ..+.++...||+
T Consensus 72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (411)
T PRK07314 72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA 151 (411)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence 568999999999999999998888 577766421 1 111 256789999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c----------CCCCCC-C-chhhhhhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----F----------RGPSDA-N-LGCLAGQA 213 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~----------~~~~~~-~-~~~~~~~~ 213 (395)
... .+.+..+|++++.||..|..+|++|.++.+||.++|..+.. | .+|... . .+....++
T Consensus 152 ~Gp---~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~dG~ 228 (411)
T PRK07314 152 KGP---NHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDRDGF 228 (411)
T ss_pred CCc---cccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCCCCE
Confidence 764 57788999999999999999999999999999999864320 0 011100 0 01112478
Q ss_pred hhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC
Q 016111 214 LFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG 292 (395)
Q Consensus 214 ~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 292 (395)
++||||+|+||++.+... .+.....++.+.+....... ... ++ . ......++++++|+++|
T Consensus 229 ~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~--~~~----~~-------~-----~~~~~~~a~~~Al~~ag 290 (411)
T PRK07314 229 VMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYH--MTA----PA-------P-----DGEGAARAMKLALKDAG 290 (411)
T ss_pred eEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCC--CCC----CC-------C-----CcHHHHHHHHHHHHHcC
Confidence 999999999999754310 00112334443322110000 000 00 0 01123468889999999
Q ss_pred CCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 293 IKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 293 l~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
+++ +|| ++-.|-.+... .+.+.+.++....+++.+ ..-..+||+.+|+-.+.|...+.. .+++.+-|
T Consensus 291 i~~-~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~~i~~~l~-l~~~~ipp~~~~ 367 (411)
T PRK07314 291 INP-EDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVS-STKSMTGHLLGAAGAVEAIFSVLA-IRDQVIPPTINL 367 (411)
T ss_pred CCH-HHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeE-CccchhchhHHHHHHHHHHHHHHH-HhCCCcCCCCCC
Confidence 997 999 88888766533 344556666543444332 134568999888877666553331 11132221
Q ss_pred -------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 -------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+ .+.++++..+||.|.+-++++|+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~vl~~ 409 (411)
T PRK07314 368 DNPDEECDLDYVPNEARERKIDYALSNSFGFGGTNASLVFKR 409 (411)
T ss_pred CCCCCCCCccccCCcccCCCCCEEEEecccCCCceEEEEEec
Confidence 0 012568888999999988998875
No 70
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.53 E-value=3e-13 Score=134.19 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=162.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCC---CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMP---GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p---~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ 176 (395)
+..+|+.+|++++|+++|++++|||.|+++++.+ +..| .....+...++ ... ++++++.+|++++.++..|..
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~-p~~~V~~~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNI-PAMAVDRQCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCC-cchhhhhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999998876 3223 22334444444 322 389999999999999999999
Q ss_pred HHHcCCCCeEEEEEeecccccc--------C------CCC----CCC-------------------ch------------
Q 016111 177 FAENNPGARVLVVCSDLSLGTF--------R------GPS----DAN-------------------LG------------ 207 (395)
Q Consensus 177 ll~~g~~~~vLvv~~d~~s~~~--------~------~~~----~~~-------------------~~------------ 207 (395)
+|++|.++++||++.|++|..- . ++. +.. ++
T Consensus 108 ~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~~~~~ygitre~~a~va~~sh~~ 187 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAEKLAEEAGIKREEMDRWSLRSHQL 187 (394)
T ss_pred HHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9999999999999999766310 0 000 000 00
Q ss_pred ----------------------------hh---h-------------------------hhhhhccccEEEEEecCCCC-
Q 016111 208 ----------------------------CL---A-------------------------GQALFGDGAAALIIGANPDT- 230 (395)
Q Consensus 208 ----------------------------~~---~-------------------------~~~~fGDgAaA~vl~~~~~~- 230 (395)
++ . ..+..+|||+|+||++.+..
T Consensus 188 A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt~~~~~~~~DGAaavvl~s~~~A~ 267 (394)
T PRK06445 188 AAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVK 267 (394)
T ss_pred HHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEecCcCCCCCCceEEEEEecHHHHH
Confidence 00 0 01111344444444432210
Q ss_pred CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChH
Q 016111 231 TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPA 309 (395)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~ 309 (395)
..+..+..++.+.+... ..... .......+++++|+++|+++ +|| ++=+|-....
T Consensus 268 ~~~~~~~a~i~g~~~~~--------------------~~~~~---~~~~~~~a~~~al~~Agl~~-~dId~~e~~d~f~~ 323 (394)
T PRK06445 268 KYGLKPMAKIRSFGFAG--------------------VPPAI---MGKGPVPASKKALEKAGLSV-KDIDLWEINEAFAV 323 (394)
T ss_pred HCCCCceEEEEEEEEec--------------------cCCch---hcchHHHHHHHHHHHcCCCH-HHcCEEEecccchH
Confidence 00000111222211100 00000 11134568899999999997 999 8889988777
Q ss_pred HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 310 IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 310 ~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
..-...+.||+.++++-.+ --.-.+||...++-...+.++.++.. .+.+ .+.|....|+|..-.+++|+.
T Consensus 324 ~~l~~~e~lg~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~----~~~~---~~gl~~~~~~gg~g~a~~~e~ 393 (394)
T PRK06445 324 VVLYAIKELGLDPETVNIK-GGAIAIGHPLGATGARIVGTLARQLQ----IKGK---DYGVATLCVGGGQGGAVVLER 393 (394)
T ss_pred HHHHHHHHhCCCccccCCC-CCHHHcCCCccchHHHHHHHHHHHHH----hcCC---CEEEEEEcccCChhhEEEEEc
Confidence 7777789999988776543 23556899999999998888887621 2233 566777777777777777763
No 71
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.52 E-value=4.5e-13 Score=132.54 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|+.+++||.|+++++.+ . ..+..+..++..+|++... +++.++.+|++++.|+..|..+|
T Consensus 26 ~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~-p~~~V~~aCaSG~~Al~~A~~~I 104 (391)
T PRK07661 26 RPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTV-PAITINRYCSSGLQSIAYGAERI 104 (391)
T ss_pred CHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCc-ceeehhhhhhHHHHHHHHHHHHH
Confidence 3789999999999999998889999999998776 2 2366777899999998522 38999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+||+++|++|.
T Consensus 105 ~sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 105 MLGHSEAVIAGGAESMSL 122 (391)
T ss_pred HcCCCCEEEEEEEeeccc
Confidence 999999999999998763
No 72
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.52 E-value=1.3e-12 Score=128.82 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHhCCCC--CCcCEEEEEecCC-----------------------------CCCC-CHHHHHHHHcCCCC
Q 016111 105 LGEEAATKAIKEWGQSK--SQITHLIFCSLVG-----------------------------VDMP-GADYQLTKMLGLNP 152 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~--~~Id~vi~~s~t~-----------------------------~~~p-~~a~~l~~~Lgl~~ 152 (395)
++..|+++||+++|+++ +++ .|+++|+.+ ..+| ..+.+++..+|++.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC
Confidence 56689999999999964 344 455555422 0112 24678899999997
Q ss_pred ccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-cccc----c----------CCCCCCCchhhhhhhhhcc
Q 016111 153 SVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SLGT----F----------RGPSDANLGCLAGQALFGD 217 (395)
Q Consensus 153 ~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s~~----~----------~~~~~~~~~~~~~~~~fGD 217 (395)
. .+.+..+|++++.||..|.++|++|..+.+||.++|. .+.. | ..|.+.+ ..++++||
T Consensus 138 p---~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~----r~G~v~gE 210 (381)
T PRK05952 138 P---VLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQ----REGLVLGE 210 (381)
T ss_pred c---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCC----CCCccccc
Confidence 5 5789999999999999999999999999999999996 3210 0 1133322 24899999
Q ss_pred ccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCC
Q 016111 218 GAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDW 296 (395)
Q Consensus 218 gAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~ 296 (395)
||+++||++.+.. ..+.....++...+....... ... +.. -.....++++++|+++|+.+
T Consensus 211 Gaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~--------------~~~-~~~---~~~~~~~ai~~Al~~agi~p- 271 (381)
T PRK05952 211 GGAILVLESAELAQKRGAKIYGQILGFGLTCDAYH--------------MSA-PEP---DGKSAIAAIQQCLARSGLTP- 271 (381)
T ss_pred cEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCC--------------CCC-CCC---CHHHHHHHHHHHHHHhCCCH-
Confidence 9999999986431 000112334444332111000 000 000 12234578899999999997
Q ss_pred Cce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCC-------
Q 016111 297 NSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTG------- 363 (395)
Q Consensus 297 ~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G------- 363 (395)
+|| ++-.|-.+.+. .+.+.+.++- +++.+ .+-..+||+.+|+-.+.+...+.. .+++.+-|=
T Consensus 272 ~dId~i~~hgtgt~~~D~~E~~al~~~fg~---~~~v~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp~~~~~~~~ 346 (381)
T PRK05952 272 EDIDYIHAHGTATRLNDQREANLIQALFPH---RVAVS-STKGATGHTLGASGALGVAFSLLA-LRHQQLPPCVGLQEPE 346 (381)
T ss_pred HHeeEEEccCCCCCCCcHHHHHHHHHHcCC---CCeee-cchhhhccChHHHHHHHHHHHHHH-HhcCccCCCCCCCCCC
Confidence 999 88899766544 3345556652 23322 145789999999988877765432 111333220
Q ss_pred -----------CCCceEEEEEEccchhhhheeee
Q 016111 364 -----------EGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 364 -----------~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
.+.++++..+||.|..-++++|+
T Consensus 347 ~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 347 FDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred CCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 01257899999999998888886
No 73
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.51 E-value=3.7e-12 Score=127.13 Aligned_cols=258 Identities=14% Similarity=0.159 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------------CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lgl 150 (395)
...++..|+.+||+++|+++.+.+ .|+++++.+ + ..+ ..+.+|...+|+
T Consensus 74 ~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl 153 (414)
T PRK08722 74 FIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGL 153 (414)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCC
Confidence 457889999999999999764433 466666421 1 111 367899999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cC----------CCCCCCchhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FR----------GPSDANLGCL 209 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~----------~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|..+.+||+++|..... +. .|.+. .
T Consensus 154 ~Gp---~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~----~ 226 (414)
T PRK08722 154 RGP---NIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDK----D 226 (414)
T ss_pred CCC---ccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcC----C
Confidence 986 57899999999999999999999999999999999985321 10 12221 2
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..+++.||||+++||++.+.. ..+.....++...+.. + +..+. . .+.. ......++++++|
T Consensus 227 ~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~----~-d~~~~---------~-~p~~---~~~~~~~a~~~Al 288 (414)
T PRK08722 227 RDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMS----G-DAYHM---------T-SPSE---DGSGGALAMEAAM 288 (414)
T ss_pred CCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEc----C-CCCCC---------C-CCCc---chHHHHHHHHHHH
Confidence 358899999999999975431 0001122334332211 0 00000 0 0000 0122346788999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCC-ccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLK-QQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~-~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
+++|+++ +|| ++-.|-.+.. -.+.+.+.+|-. ..+++.+ .+-..+||+.+|+-.+.|...+.. .+++.+-
T Consensus 289 ~~agi~~-~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~~ip 365 (414)
T PRK08722 289 RDAGVTG-EQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVS-STKSMTGHLLGAAGSVEAIITVMS-LVDQIVP 365 (414)
T ss_pred HHcCCCH-HHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceee-CcccccccchHHHHHHHHHHHHHH-HhcCccC
Confidence 9999997 999 8888875543 345566677632 2233332 134688999999887777543221 1112211
Q ss_pred C-----------------C-----CCCceEEEEEEccchhhhheeeee
Q 016111 362 T-----------------G-----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ~-----------------G-----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
| + ....+++.-+||.|.+-++++|+.
T Consensus 366 p~~n~~~~~~~~~~~~v~~~~~~~~~~~~~l~nsfGfGG~n~~lvl~~ 413 (414)
T PRK08722 366 PTINLDDPEEGLDIDLVPHTARKVESMEYAICNSFGFGGTNGSLIFKK 413 (414)
T ss_pred CCCCCCCCCCCCCcccCCCccccCCCCCEEEEecccCCCceEEEEEec
Confidence 1 0 012567888899999988888863
No 74
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.50 E-value=5e-12 Score=129.18 Aligned_cols=257 Identities=15% Similarity=0.177 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC---cC----EEEEEecCC-C--------------------CCC-----CHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQ---IT----HLIFCSLVG-V--------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~---Id----~vi~~s~t~-~--------------------~~p-----~~a~~l~~~L 148 (395)
...|+..|+++||+++|++++. ++ .|++++..+ . ..| ..+..|+..+
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~ 278 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDL 278 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHh
Confidence 4568899999999999997642 21 566666532 0 011 2356889999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c----------CCCCCCCch
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F----------RGPSDANLG 207 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~----------~~~~~~~~~ 207 (395)
|+... .+.+..+|++++.||..|..+|++|..+.+||.++|..... + ..|.|.+
T Consensus 279 gl~Gp---~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~-- 353 (540)
T PLN02787 279 GWMGP---NYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMN-- 353 (540)
T ss_pred CCCCC---ccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccC--
Confidence 99875 57899999999999999999999999999999999963110 0 1132222
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..++++|+||+++||++.+.. ..+....-++.+.+... ++.++.. +. --...+.++|++
T Consensus 354 --rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~--------------Da~~~t~-p~---p~g~g~~~am~~ 413 (540)
T PLN02787 354 --RDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTC--------------DAYHMTE-PH---PEGAGVILCIEK 413 (540)
T ss_pred --CCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEec--------------CCCCCCC-CC---cCHHHHHHHHHH
Confidence 248999999999999975431 00011123444322110 1110000 00 001234578899
Q ss_pred hhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
+|+++|+++ +|| ++-.|-.+.+. .+.+.+.+|-.. .++.+ .+-..+||+.+|+-.+.+...+.. .++|.+
T Consensus 414 AL~~AGl~p-~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~-~~pV~-S~Ks~iGH~~gAAGa~eli~~~la-l~~g~i 489 (540)
T PLN02787 414 ALAQSGVSK-EDVNYINAHATSTKAGDLKEYQALMRCFGQNP-ELRVN-STKSMIGHLLGAAGAVEAIATVQA-IRTGWV 489 (540)
T ss_pred HHHHcCCCH-HHCcEEEccCccCCCCCHHHHHHHHHHhCCCC-Cceee-CCCCCcCCCcccchHHHHHHHHHH-HhcCCc
Confidence 999999998 999 88899765443 455666777322 22221 135689999999877766554321 111332
Q ss_pred cC-----------------C-C----CCceEEEEEEccchhhhheeeee
Q 016111 361 TT-----------------G-E----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 361 ~~-----------------G-~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
-| + . ..+.+|..+||-|..-++++|+-
T Consensus 490 PPt~n~~~pd~~~~~~~~v~~~~~~~~ir~aL~nSfGFGG~Naslvl~~ 538 (540)
T PLN02787 490 HPNINLENPESGVDTKVLVGPKKERLDIKVALSNSFGFGGHNSSILFAP 538 (540)
T ss_pred CCCCCCCCCCccCCcccccccccccCCcCEEEEeeecCCceeEEEEEEe
Confidence 21 0 0 11456778899998888888874
No 75
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=99.50 E-value=7.3e-13 Score=131.73 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHHHHh-CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEW-GQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~a-g~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++ |++++|||.|++++..+ ...+..+..++..+|+++.+ ++.++.+|+++..++..|.++
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~~p--~~~v~~~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDFLP--GTTVNRYCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCCCC--eeeeeccchhHHHHHHHHHHH
Confidence 47899999999999997 99999999999876544 22355678899999997543 788999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|.++.|||+++|++|.
T Consensus 104 I~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 104 IKAGEGDVFISAGVETVSR 122 (406)
T ss_pred HHCCCCCEEEEeeEEeccc
Confidence 9999999999999998653
No 76
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.49 E-value=1.6e-12 Score=130.44 Aligned_cols=95 Identities=9% Similarity=0.006 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCC-HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPG-ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~-~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.||+++.++ +..+. .+..+...+|++... +++.++.+|++++.|+..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~-pa~~V~~~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCc-ceEEEeccCchHHHHHHHHHHHH
Confidence 5799999999999999999999999999988766 44343 445677788998633 37899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.|||++.|++|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998763
No 77
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=4.4e-12 Score=125.34 Aligned_cols=95 Identities=8% Similarity=-0.029 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ .. ....+..+...+|++... +++.++++|++++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~-p~~tV~~~CaSG~~A~~~A~~~I 103 (387)
T PRK07850 25 HAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV-GATTIDCQCGSAQQANHLVAGLI 103 (387)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC-ceEEEecccccHHHHHHHHHHHH
Confidence 3789999999999999999999999999987654 22 133556777779998543 38899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 104 AAGAIDVGIACGVEAMSR 121 (387)
T ss_pred HCCCCCEEEEEeEecCCC
Confidence 999999999999999874
No 78
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=2.8e-12 Score=126.53 Aligned_cols=95 Identities=9% Similarity=0.025 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC--CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV--DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~--~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+..+++.+|+++|++|++||.||++...+. ..+..+.++.-..|++..+ +++.++..|+|++.|+.+|.+.|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~v-p~~tvnr~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKA-SGVTLDRFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCC-CeeeeccccchHHHHHHHHHHHH
Confidence 38899999999999999999999999999988762 2467889999999999876 49999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+.+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999984
No 79
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=3.6e-12 Score=126.42 Aligned_cols=232 Identities=17% Similarity=0.105 Sum_probs=150.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CC--CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VD--MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~--~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|++++|+++|+++++||.|+++++.+ +. .+..+..+...+|+...+ +++++++|++++.||.+|..+
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~~p--~~~v~~~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRFKP--ATRVENACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCCCc--eeeeccccHHHHHHHHHHHHH
Confidence 3789999999999999999999999999987643 21 112233445566777654 789999999999999999999
Q ss_pred HHcCCCCeEEEEEeeccccc-------------c--------C-------------------------------------
Q 016111 178 AENNPGARVLVVCSDLSLGT-------------F--------R------------------------------------- 199 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~~-------------~--------~------------------------------------- 199 (395)
|++|.+++|||+++|++|.. + .
T Consensus 99 I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~ 178 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVA 178 (389)
T ss_pred HHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999986421 0 0
Q ss_pred CCCC-----CCch----------------hhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccceE
Q 016111 200 GPSD-----ANLG----------------CLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQ 258 (395)
Q Consensus 200 ~~~~-----~~~~----------------~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 258 (395)
+|.- .+.+ .......++|||+|+||.+++.... .....++...+...... .+.
T Consensus 179 nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~-~~~~v~i~g~~~~~~~~-----~~~ 252 (389)
T PRK07516 179 NPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARA-LQRAVRFRARAHVNDFL-----PLS 252 (389)
T ss_pred CChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHh-cCCCEEEEEEEeccCcc-----ccc
Confidence 0100 0000 0012234578988888887543110 01123343332211000 000
Q ss_pred EecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016111 259 FREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-------------- 323 (395)
Q Consensus 259 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-------------- 323 (395)
..+.. .......+++++++++|+++ +|| ++-+|-......-...+.||+.+.
T Consensus 253 ----------~~~~~--~~~~~~~a~~~a~~~agl~~-~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~ 319 (389)
T PRK07516 253 ----------RRDPL--AFEGPRRAWQRALAQAGVTL-DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAK 319 (389)
T ss_pred ----------CCCcc--ccHHHHHHHHHHHHHcCCCH-HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 00000 01223368889999999997 999 888998877777777889998764
Q ss_pred --chhHHH-HHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 --KLSATR-HVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 --~~~~~~-~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+++.|. -=+..+||...|+-...+.++..+
T Consensus 320 ~g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~Q 352 (389)
T PRK07516 320 DGKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQ 352 (389)
T ss_pred CCCeeecCCCCcccCCCCccHHHHHHHHHHHHH
Confidence 222220 003468999999999988887664
No 80
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=99.46 E-value=4.3e-12 Score=126.41 Aligned_cols=236 Identities=13% Similarity=0.082 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC-----CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM-----PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMA 174 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~-----p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A 174 (395)
+..+|+.+|++++|+++|+++++||.||++++++ +.. +.....++ +++...+ +++++.+|++++.||.+|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~g~~--~~~v~~~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALWGVP--ASRHEAACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCCCCc--eeecccccHHHHHHHHHH
Confidence 3799999999999999999999999999988765 221 22222222 2443332 789999999999999999
Q ss_pred HHHHHcCCCCeEEEEEeecccccc-------------C------CCCC-CC-----------------------------
Q 016111 175 KDFAENNPGARVLVVCSDLSLGTF-------------R------GPSD-AN----------------------------- 205 (395)
Q Consensus 175 ~~ll~~g~~~~vLvv~~d~~s~~~-------------~------~~~~-~~----------------------------- 205 (395)
..+|++|.+++|||+++|+++... . .|.. ..
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~y~~~yG~t~e~la~va~~~~~ 180 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVADEYDRRYGLDEEHLRAIAEINFA 180 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999999999999865210 0 0000 00
Q ss_pred ----------c----------hh------------hhhhhhhccccEEEEEecCCCC-CCCC-CCceEEEeeeeeecCCC
Q 016111 206 ----------L----------GC------------LAGQALFGDGAAALIIGANPDT-TLSE-KPLFQIVSGAQTILPGS 251 (395)
Q Consensus 206 ----------~----------~~------------~~~~~~fGDgAaA~vl~~~~~~-~~~~-~~~~~~~~~~~~~~p~~ 251 (395)
+ ++ .......+|||+|+||.+++.. ..+. .+...+.+.+....+..
T Consensus 181 ~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~~l~~~~~~~~i~g~~~~~~~~~ 260 (403)
T PRK06289 181 NARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLG 260 (403)
T ss_pred HHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHHHhccCCCCEEEEEEEEeccccc
Confidence 0 00 0011123688888888865421 1101 12244554432211100
Q ss_pred cCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-------
Q 016111 252 DSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------- 323 (395)
Q Consensus 252 ~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------- 323 (395)
. ........ ..... ......+.+++++++|+++ +|| .+-+|-.-....-...|.||+.+.
T Consensus 261 ~---~~~~~~~~------~~~~~--~~~~~~aa~~a~~~Agi~~-~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v 328 (403)
T PRK06289 261 L---EQKLDRSA------GDPYV--LPHVRQAVLDAYRRAGVGL-DDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAI 328 (403)
T ss_pred c---cccccccc------ccccc--cHHHHHHHHHHHHHcCCCH-HHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHH
Confidence 0 00000000 00000 1113357889999999997 999 788898877777777899998752
Q ss_pred -----------chhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 324 -----------KLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 324 -----------~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++-.+ --.-.+||-..++-+..+.+++.+
T Consensus 329 ~~G~~~~~G~lpvN~~-GG~la~Ghp~gatG~~~~~e~~~Q 368 (403)
T PRK06289 329 ENGEIAIGGRLPINPS-GGLIGGGHPVGASGVRMLLDAAKQ 368 (403)
T ss_pred hcCCcccCCCeeEcCC-CCccccCCCccchHHHHHHHHHHH
Confidence 22221 112347999988888888888775
No 81
>PRK06158 thiolase; Provisional
Probab=99.46 E-value=4.8e-12 Score=125.14 Aligned_cols=227 Identities=17% Similarity=0.154 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.|++++.. +..|+ ..+++.||+++.+ +++++.+|+++..+|..|.++|++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~-~~~~~--~~la~~lGl~~~~--~~~~~~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASPD-DALWG--LSVAEYLGIRPRF--VDGTMIGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCC-CCCcH--HHHHHHcCCCCee--eccccCccHHHHHHHHHHHHHHHcC
Confidence 78999999999999999999999999987642 23343 5799999998764 7888999999999999999999999
Q ss_pred CCCeEEEEE-eecccc-----c------cC-------------------------------------------CCCC---
Q 016111 182 PGARVLVVC-SDLSLG-----T------FR-------------------------------------------GPSD--- 203 (395)
Q Consensus 182 ~~~~vLvv~-~d~~s~-----~------~~-------------------------------------------~~~~--- 203 (395)
.+++|||+. .+..+. . +. +|.-
T Consensus 103 ~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~ 182 (384)
T PRK06158 103 LCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMR 182 (384)
T ss_pred CCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhC
Confidence 999999984 433221 0 00 0100
Q ss_pred --C------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEe
Q 016111 204 --A------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHL 268 (395)
Q Consensus 204 --~------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~ 268 (395)
. ++-.....+..+|||+|+||.+.+.. ..+. ....+...+....... ....
T Consensus 183 ~~~t~e~vl~s~~ia~Pl~~~d~~~~~DGAaAvVL~s~e~A~~l~~-~~v~i~g~~~~~~~~~-------~~~~------ 248 (384)
T PRK06158 183 DPLTIDDVLAARMVSDPLSVRDCCLVTDGAGAVVMVRADRARDLPR-PPVYVLGAAAATWHRQ-------ISSM------ 248 (384)
T ss_pred CCCCHHHHhcCCccCCCCchhhcCCccCCeEEEEEecHHHHhhcCC-CcEEEEEEEEecCCcc-------cccc------
Confidence 0 00012234568999999999976531 1101 1233333222110000 0000
Q ss_pred CchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc----------------chhHH-HH
Q 016111 269 SKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ----------------KLSAT-RH 330 (395)
Q Consensus 269 ~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e----------------~~~~~-~~ 330 (395)
..+. ......+++++++++|+++ +|| ++=+|-.-...-....|.||+.+. +++.| .-
T Consensus 249 -~~~~---~~~~~~aa~~A~~~AGi~p-~DId~~ElyD~Fs~~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~~PvN~sG 323 (384)
T PRK06158 249 -PDLT---VTAAAESGPRAFAMAGLTP-ADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVEGGRIAPGGRLPVNTNG 323 (384)
T ss_pred -cchh---hhHHHHHHHHHHHHcCCCH-HHCcEEEecCCchHHHHHHHHHcCCCCCCcHHHHHHCCCCccCCCccccCCC
Confidence 0111 1223468889999999997 999 778888776666677799998644 12211 00
Q ss_pred HHHhcCCCccchHHHHHHHHHHh
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
=+-.+||. .++-+..+.++.++
T Consensus 324 G~ls~Ghp-gatG~~~~~E~~~Q 345 (384)
T PRK06158 324 GGLSCVHP-GMYGLFLLIEAVRQ 345 (384)
T ss_pred hhhcCCCC-chhhHHHHHHHHHH
Confidence 13346888 45566666665553
No 82
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.45 E-value=1.9e-12 Score=129.28 Aligned_cols=255 Identities=12% Similarity=0.094 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHhCCC---CCCcCEEEEEecC---------------C-CCCC---------CHHHHHHHHcCCCCc
Q 016111 102 VPKLGEEAATKAIKEWGQS---KSQITHLIFCSLV---------------G-VDMP---------GADYQLTKMLGLNPS 153 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~---~~~Id~vi~~s~t---------------~-~~~p---------~~a~~l~~~Lgl~~~ 153 (395)
...|+..|++++|+++|++ +++|+.++.++.. + +..| ..+.+|+..||+...
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G~ 159 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGE 159 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCCC
Confidence 5679999999999999986 3556555543321 1 1111 256788899999764
Q ss_pred cccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecc-cc----------c------------cCCCCCCCchhhh
Q 016111 154 VKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLS-LG----------T------------FRGPSDANLGCLA 210 (395)
Q Consensus 154 ~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~-s~----------~------------~~~~~~~~~~~~~ 210 (395)
.+.+..+|++++.||..|..+|++|.++.+||+++|.. +. . ...|.+. ..
T Consensus 160 ---~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~----~~ 232 (410)
T PRK07103 160 ---GFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQ----DR 232 (410)
T ss_pred ---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCC----CC
Confidence 57799999999999999999999999999999998641 10 0 0012222 12
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+..... . . .. .+. .....++++++|+
T Consensus 233 dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~-~-~-----~~--------~p~-----~~~~~~a~~~Al~ 292 (410)
T PRK07103 233 DGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDA-N-R-----GP--------DPS-----LEGEMRVIRAALR 292 (410)
T ss_pred CCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCC-C-C-----CC--------CCC-----HHHHHHHHHHHHH
Confidence 47899999999999975431 0001123344433321100 0 0 00 011 1123478889999
Q ss_pred cCCCCCCCce-EEEEcCCChHHHHHHH-HH-cCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAIVNQIE-AK-LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~~~~i~-~~-lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
++|+++ +|| ++..|-.+....+.+. +. ++.....++.+ .+-..+||+.+|+-.+.|...+.. .+++.+-|
T Consensus 293 ~Agi~~-~dId~v~~hgtgt~~~D~~E~~al~~~~~~~~~v~-s~k~~~Gh~~~AsG~~~l~~~~l~-l~~~~ipp~~~~ 369 (410)
T PRK07103 293 RAGLGP-EDIDYVNPHGTGSPLGDETELAALFASGLAHAWIN-ATKSLTGHGLSAAGIVELIATLLQ-MRAGFLHPSRNL 369 (410)
T ss_pred HcCCCH-HHCCEEEccCCCCCCCCHHHHHHHhcCCCCCCeEE-CCCcccccCchhhhHHHHHHHHHH-HhCCeeCCCCCC
Confidence 999997 999 8899987665432221 11 22211222221 134667999999988888654321 11122210
Q ss_pred ------------C----CCCceEEEEEEccchhhhheeee
Q 016111 363 ------------G----EGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 363 ------------G----~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
. ....+++..+||.|.+-++++|+
T Consensus 370 ~~~~~~~~~~v~~~~~~~~~~~~l~~s~gfGG~n~~~vl~ 409 (410)
T PRK07103 370 DEPIDERFRWVGSTAESARIRYALSLSFGFGGINTALVLE 409 (410)
T ss_pred CCCCCCCcCccCCCCcCCCCCEEEEecccCCCceEEEEEe
Confidence 0 01257888899999998888886
No 83
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.45 E-value=3.4e-12 Score=128.12 Aligned_cols=258 Identities=16% Similarity=0.185 Sum_probs=163.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCc-C----EEEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQI-T----HLIFCSLVG-V---------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~I-d----~vi~~s~t~-~---------------------~~p-----~~a~~l~~~L 148 (395)
....|+..|++++|+++|++++++ + .|++++..+ + ..+ ..+.+|...+
T Consensus 81 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 160 (424)
T PRK06333 81 RFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRY 160 (424)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHh
Confidence 356799999999999999987766 3 566666432 1 111 2467899999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCCCCCc
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F-----------RGPSDANL 206 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~~~~~ 206 (395)
|+... .+.+..+|++++.||..|..+|++|.++.+||+++|..... + ..|.+.
T Consensus 161 gl~Gp---~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~-- 235 (424)
T PRK06333 161 GFKGP---LGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDR-- 235 (424)
T ss_pred CCCCC---CccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCC--
Confidence 99765 67889999999999999999999999999999999973210 1 012221
Q ss_pred hhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHH
Q 016111 207 GCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLD 285 (395)
Q Consensus 207 ~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 285 (395)
...+++.||||+++||++.+.. ..+.....++...+... + +.++.. +. .......++++
T Consensus 236 --~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~----d----------~~~~~~-~~---~~~~~~~~a~~ 295 (424)
T PRK06333 236 --DRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSA----D----------AYHMTA-GP---EDGEGARRAML 295 (424)
T ss_pred --CCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC----C----------CCCCCC-CC---CCcHHHHHHHH
Confidence 1247889999999999975431 00011122343332110 0 000000 00 01223457889
Q ss_pred HhhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCC
Q 016111 286 EAFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGK 359 (395)
Q Consensus 286 ~~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~ 359 (395)
++|+++|+++ +|| ++-.|-.+.. -...+.+.+|- ..+++.+ .....+||+.+|+-.+.+...+.. .++|.
T Consensus 296 ~Al~~Agi~p-~dId~i~~hgtgt~~~D~~E~~al~~~fg~-~~~~~v~-s~K~~~GH~~gAaG~~~~~~~~l~-l~~g~ 371 (424)
T PRK06333 296 IALRQAGIPP-EEVQHLNAHATSTPVGDLGEVAAIKKVFGH-VSGLAVS-STKSATGHLLGAAGGVEAIFTILA-LRDQI 371 (424)
T ss_pred HHHHHcCCCH-HHCCEEeccCCCCccchHHHHHHHHHHhCC-CCCceeE-CcccchhhhHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999997 999 8889976544 24556677772 2233322 146788999888866655543321 11121
Q ss_pred ccC------------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 360 VTT------------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 360 i~~------------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+-| + .+.++++..+||.|.+..+++|+.
T Consensus 372 ipp~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~s~gfGG~n~~~il~~ 421 (424)
T PRK06333 372 APPTLNLENPDPAAEGLDVVANKARPMDMDYALSNGFGFGGVNASILFRR 421 (424)
T ss_pred cCCCCCCCCCCCCccccccccCCCcccCcCEEEEeeecCCCeeEEEEEec
Confidence 110 0 012567888999998888888874
No 84
>PRK08256 lipid-transfer protein; Provisional
Probab=99.45 E-value=6.5e-12 Score=124.64 Aligned_cols=257 Identities=15% Similarity=0.114 Sum_probs=162.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|++++|+++|+++++||.+++++..+.... ...+...+|+...+ ++.++.+|++++.+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~~~--~~~v~~~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTGIP--IVNVNNNCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCCCC--CcccccccHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999988776552211 23567789997643 6789999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-c---------------------CCCC-CC----------------------------------
Q 016111 182 PGARVLVVCSDLSLGT-F---------------------RGPS-DA---------------------------------- 204 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-~---------------------~~~~-~~---------------------------------- 204 (395)
.++.|||+++|..+.. + ..+. ..
T Consensus 98 ~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~ 177 (391)
T PRK08256 98 AADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRH 177 (391)
T ss_pred CCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHh
Confidence 9999999999986520 0 0000 00
Q ss_pred -------------Cch------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceE
Q 016111 205 -------------NLG------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQ 258 (395)
Q Consensus 205 -------------~~~------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 258 (395)
+.+ ........+|||+|+||.+++.. ..+..+..++.+.+....... ...
T Consensus 178 A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~a~~~~~~~~v~i~g~~~~~~~~~--~~~-- 253 (391)
T PRK08256 178 AANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDRAVEIVAQAMTTDTPS--TFD-- 253 (391)
T ss_pred hhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHHHHhcCCCCCEEEEEEEEeccccc--ccc--
Confidence 000 01112234788888888875431 110112344443221110000 000
Q ss_pred EecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc--------------
Q 016111 259 FREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-------------- 323 (395)
Q Consensus 259 ~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-------------- 323 (395)
. .+. .... .......+++++++++|+++ +|| .+-+|.......-...|.||+.++
T Consensus 254 ~-~~~------~~~~--~~~~~~~a~~~a~~~ag~~~-~DiD~~ei~d~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~ 323 (391)
T PRK08256 254 G-RSM------IDLV--GYDMTRAAAQQVYEQAGIGP-EDIDVVELHDCFSANELLTYEALGLCPEGEAEKFIDDGDNTY 323 (391)
T ss_pred c-ccc------cccc--ccHHHHHHHHHHHHHcCCCH-HHCCEEeeccCCcHHHHHHHHHcCCCCCCchHHHHHCCCccC
Confidence 0 000 0000 01122357889999999997 999 889999887888888899999876
Q ss_pred ----chhHHHHHHHhcCCCccchHHHHHHHHHHhhhhc-C--CccCCCCCceEEEEEEccchhh
Q 016111 324 ----KLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEE-G--KVTTGEGLEWGVMFGIGAGVTV 380 (395)
Q Consensus 324 ----~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~-g--~i~~G~~~d~vll~~~G~G~s~ 380 (395)
++-.+ -=.-.+||...|+-...+.++..+...+ | .++.. ...+..+.|.|.+.
T Consensus 324 ~G~~pvN~~-GG~ls~Ghp~gasG~~~~~e~~~QL~g~ag~~Qv~~~---~~~l~~~~G~~~~~ 383 (391)
T PRK08256 324 GGRWVVNPS-GGLLSKGHPLGATGLAQCAELTWQLRGTAGARQVEGA---RLALQHNLGLGGAC 383 (391)
T ss_pred CCCeeeCCC-CccccCCCCccHHHHHHHHHHHHHhcCCcCCCcCCcc---ceEEEeccccceeE
Confidence 33221 1123479999888888888877752211 1 12222 56777777755443
No 85
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.45 E-value=3.3e-12 Score=126.13 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ ...+..+..++..+|++... +++.++.+|++++.|+..|..+|+
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEV-PGYTINKVCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCc-cchhhcchhHHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999988765 33345667788999998533 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998873
No 86
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=2.2e-11 Score=120.36 Aligned_cols=233 Identities=16% Similarity=0.061 Sum_probs=149.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|++++|||.+|+++... + ..+..+..+++.||+.+.+ ++.++.+|+++..+|..|.++|
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~~~--~~~V~~~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIRKP--VSRVYVGGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCCCC--eEEEecCchhHHHHHHHHHHHH
Confidence 3789999999999999999999999999876322 2 2456788899999988654 7889999999999999999999
Q ss_pred HcCCCCeEEEEEeeccccc---------------cC------------------------------------------CC
Q 016111 179 ENNPGARVLVVCSDLSLGT---------------FR------------------------------------------GP 201 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~~---------------~~------------------------------------------~~ 201 (395)
++|.+++||||++|+++.. +. +|
T Consensus 106 ~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP 185 (392)
T PRK06065 106 ASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNP 185 (392)
T ss_pred hCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCc
Confidence 9999999999999974210 00 01
Q ss_pred CC-----CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCc
Q 016111 202 SD-----AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMG 263 (395)
Q Consensus 202 ~~-----~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 263 (395)
.- .+ +-........+|||+|+||.+.+.. ..+.. ...+...+...-+.. +... +
T Consensus 186 ~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~-~v~I~g~~~~~~~~~-----~~~~-~- 257 (392)
T PRK06065 186 YAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDT-PVWVEGVGWTLDNTE-----WPNR-D- 257 (392)
T ss_pred hhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCC-CEEEEEEEEecCccc-----cccc-c-
Confidence 00 00 0011223456899999999875421 11011 222443332211110 0000 0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHhhccCCCCC-CCce-EEEEcCCChHHHHHHHHHcCCCcc-c---------------h
Q 016111 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKD-WNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-K---------------L 325 (395)
Q Consensus 264 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~-~~di-~~i~hq~~~~~~~~i~~~lgi~~e-~---------------~ 325 (395)
+. .......+.+++++++|+++ .+|+ .+=+|-.-..+.-...|.||+-+. + +
T Consensus 258 --~~--------~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~ 327 (392)
T PRK06065 258 --LA--------YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDI 327 (392)
T ss_pred --cc--------ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCe
Confidence 00 01112357788999999973 3778 777887765555556688886432 1 1
Q ss_pred hHH-HHHHHhcCCCccchHHHHHHHHHHh
Q 016111 326 SAT-RHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 326 ~~~-~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+.| .--+-.+||.+.++-+..+.++.++
T Consensus 328 pvN~~GG~la~Ghp~gatG~~~~~e~~~Q 356 (392)
T PRK06065 328 PSSPSGGLLGVGNPIAAAGLMKVISIYWQ 356 (392)
T ss_pred eecCCCccccCCCCccHHHHHHHHHHHHH
Confidence 110 0012337999988888888887765
No 87
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.44 E-value=4.7e-12 Score=126.89 Aligned_cols=263 Identities=14% Similarity=0.135 Sum_probs=165.6
Q ss_pred hHHHHHHHHHHHHHHHhCCC-CCCcC----EEEEEecCC-C---------------------CCC-----CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQS-KSQIT----HLIFCSLVG-V---------------------DMP-----GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~-~~~Id----~vi~~s~t~-~---------------------~~p-----~~a~~l~~~L 148 (395)
....|+..|+++||+++|++ +++++ .+++++..+ + ..| ..+.+|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 36789999999999999998 66654 355544322 1 011 2467888899
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------cC-----CCCCCC--chhhh
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------FR-----GPSDAN--LGCLA 210 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~~-----~~~~~~--~~~~~ 210 (395)
|+... ++.+..+|++++.||..|..+|++|..+.+||+++|..... +. +|.... .+...
T Consensus 156 ~l~Gp---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKGP---SGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCCc---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99976 57889999999999999999999999999999999973210 00 111000 01112
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+... . +.++.. +.. ......++++++|+
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~--d------------~~~~~~-p~~---~~~~~~~ai~~Al~ 294 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSS--D------------AHHITA-PHP---DGRGARRCMENALK 294 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcC--C------------CCCCCC-CCC---ChHHHHHHHHHHHH
Confidence 47889999999999986531 00011122343332210 0 000000 000 01234568899999
Q ss_pred c-CCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc
Q 016111 290 P-FGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT 361 (395)
Q Consensus 290 ~-~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~ 361 (395)
+ +|+++ +|| ++-.|-.+... .+.+.+.++-.. +.++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 295 ~~Agi~~-~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~-s~K~~~GH~~~AaG~~~l~~~~l~-l~~~~ip 371 (421)
T PTZ00050 295 DGANINI-NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVS-STKGGLGHLLGAAGAVESIVTILS-LYEQIIP 371 (421)
T ss_pred hccCCCh-hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEE-CccccccccHHHHHHHHHHHHHHH-HHcCccC
Confidence 9 99997 999 88899766533 345666666322 223322 134689999999988888765431 1113321
Q ss_pred C---------C--------------CCCceEEEEEEccchhhhheeeee
Q 016111 362 T---------G--------------EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 362 ~---------G--------------~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
| . .....++..+||.|.+-++++|+.
T Consensus 372 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~~ 420 (421)
T PTZ00050 372 PTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFTK 420 (421)
T ss_pred CCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEeC
Confidence 1 0 012578899999999999999874
No 88
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.43 E-value=2.5e-13 Score=103.72 Aligned_cols=66 Identities=23% Similarity=0.229 Sum_probs=55.1
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
||++++|+|++.||++|.++|++|..++||||++|+.+. +.++ .++.+..+|||||+|+||+++++
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~-----~~~~~~~~~gDgAaA~vl~~~~~ 66 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDR-----TDRQTAFIFGDGAAAVVLSRDEE 66 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHT-----THHHHHTTB-EEEEEEEEEEESS
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccc-----cccCcceeecchheEEEEEecCC
Confidence 689999999999999999999999999999999999997 4433 23456789999999999999754
No 89
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.43 E-value=6.5e-12 Score=124.59 Aligned_cols=254 Identities=17% Similarity=0.156 Sum_probs=161.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++... ...+..+..++..+|++... ++..++.+|++++.++..|.++|+
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~-p~~~v~~~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPST-ICTTVNKVCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCC-ceEEEeccchHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999876543 22234455688999997543 367789999999999999999999
Q ss_pred cCCCCeEEEEEeecccccc--C------------------------CCC-C---------------CCch----------
Q 016111 180 NNPGARVLVVCSDLSLGTF--R------------------------GPS-D---------------ANLG---------- 207 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~~--~------------------------~~~-~---------------~~~~---------- 207 (395)
+|.++.||+++.|.+|... . +|. . .+++
T Consensus 103 sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~ 182 (394)
T PLN02644 103 LGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSY 182 (394)
T ss_pred cCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 9999999999988765200 0 000 0 0000
Q ss_pred -----hhh-------------------------------------------------------hhhhhccccEEEEEecC
Q 016111 208 -----CLA-------------------------------------------------------GQALFGDGAAALIIGAN 227 (395)
Q Consensus 208 -----~~~-------------------------------------------------------~~~~fGDgAaA~vl~~~ 227 (395)
++. .....+|||+|+||.+.
T Consensus 183 ~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~ 262 (394)
T PLN02644 183 ERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSG 262 (394)
T ss_pred HHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccH
Confidence 000 01122455555555543
Q ss_pred CCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcC
Q 016111 228 PDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP 305 (395)
Q Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq 305 (395)
... ..+..+..++.+.+.... ..... ...-..+++++|+++|+++ +|| ++=+|-
T Consensus 263 ~~A~~~~~~~~a~I~g~~~~~~--------------------~~~~~---~~~~~~a~~~al~~Agi~~-~Did~~Ei~d 318 (394)
T PLN02644 263 EKALELGLQVIAKIRGYADAAQ--------------------APELF---TTAPALAIPKALKHAGLEA-SQVDYYEINE 318 (394)
T ss_pred HHHHHCCCCeEEEEEEEEEcCC--------------------CCccc---chhHHHHHHHHHHHcCCCH-HHCCEEEeCc
Confidence 221 000011112222211000 00000 0011248889999999997 999 777787
Q ss_pred CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheee
Q 016111 306 GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 306 ~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
......-...+.||+..+++..+ --.-.+||..+++-...+.++..+.. + +.| .+.+....++|..-++++|
T Consensus 319 ~f~~~~l~~~e~lg~~~~~vN~~-GG~l~~Ghp~gasG~~~~~~~~~~l~--~--~~~---~~g~~~~~~~gg~g~a~~~ 390 (394)
T PLN02644 319 AFSVVALANQKLLGLDPEKVNVH-GGAVSLGHPIGCSGARILVTLLGVLR--S--KNG---KYGVAGICNGGGGASAIVV 390 (394)
T ss_pred HHHHHHHHHHHHhCCCccccCCC-CChHhhCCCHHHHHHHHHHHHHHHHH--h--cCC---CeEEEEEeccCCceeEEEE
Confidence 66666666788999987776543 23456899999999888888877621 1 233 4566645555555566777
Q ss_pred ee
Q 016111 386 RS 387 (395)
Q Consensus 386 ~~ 387 (395)
+.
T Consensus 391 e~ 392 (394)
T PLN02644 391 EL 392 (394)
T ss_pred Ee
Confidence 64
No 90
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=99.42 E-value=1e-11 Score=120.59 Aligned_cols=256 Identities=16% Similarity=0.168 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCCcCEEEEEecCC-C---------------------C----CC-CHHHHHHHHcCCCC
Q 016111 102 VPKLGEEAATKAIKEWGQ--SKSQITHLIFCSLVG-V---------------------D----MP-GADYQLTKMLGLNP 152 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~--~~~~Id~vi~~s~t~-~---------------------~----~p-~~a~~l~~~Lgl~~ 152 (395)
...|+..|++++|+++|+ +++++..++ ++..+ . . ++ ..+.+|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~-G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATII-GAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEE-ecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC
Confidence 567899999999999996 555665444 44321 1 0 11 35678999999998
Q ss_pred ccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----------c-----------CCCCCCCchhhh
Q 016111 153 SVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----------F-----------RGPSDANLGCLA 210 (395)
Q Consensus 153 ~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----------~-----------~~~~~~~~~~~~ 210 (395)
. .+.+..+|++++.||..|..+|+.|..+.+||.++|..... + ..|.|. ..
T Consensus 83 p---~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~----~r 155 (342)
T PRK14691 83 P---IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDT----AR 155 (342)
T ss_pred C---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCC----CC
Confidence 6 57889999999999999999999999999999999873210 0 012222 22
Q ss_pred hhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhc
Q 016111 211 GQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFS 289 (395)
Q Consensus 211 ~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~ 289 (395)
.++++||||+++||++.+.. ..+.....++...+....... +. ...+. .....++++++|+
T Consensus 156 ~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~---~~-~p~p~--------------~~~~~~ai~~AL~ 217 (342)
T PRK14691 156 DGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYH---MT-SGAED--------------GDGAYRAMKIALR 217 (342)
T ss_pred CCccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCC---CC-CCCCC--------------HHHHHHHHHHHHH
Confidence 58999999999999975431 100123445554432210000 00 00000 2234468899999
Q ss_pred cCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC-
Q 016111 290 PFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT- 362 (395)
Q Consensus 290 ~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~- 362 (395)
++|+++ +|| ++-.|-.+.+. .+.+.+.+|-. ..++.+ .+-..+||+.+|+-.+.+...+.. .+++.+-|
T Consensus 218 ~Agl~p-~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~~-~~~~v~-s~K~~~GH~~~AaG~~~~~~~~l~-l~~~~ippt 293 (342)
T PRK14691 218 QAGITP-EQVQHLNAHATSTPVGDLGEINAIKHLFGES-NALAIT-STKSATGHLLGAAGGLETIFTVLA-LRDQIVPAT 293 (342)
T ss_pred HcCCCH-HHCCEEEecCCCCcCCCHHHHHHHHHHhCCC-CCceEE-CCcccccCCcchhhHHHHHHHHHH-HhCCccCCc
Confidence 999997 999 88899765443 45566777732 223222 135689998777655444432211 01122111
Q ss_pred -----------------CC----CCceEEEEEEccchhhhheeeee
Q 016111 363 -----------------GE----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -----------------G~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+. +...+|..+||-|..-++++|+.
T Consensus 294 ~n~~~~d~~~~~~~~v~~~~~~~~~~~al~nsfgfGG~n~~lvl~~ 339 (342)
T PRK14691 294 LNLENPDPAAKGLNIIAGNAQPHDMTYALSNGFGFAGVNASILLKR 339 (342)
T ss_pred CCCCCCCccccccCcccCCCccCCCCEEEEeCccCCCeeEEEEEee
Confidence 00 12567889999999999999864
No 91
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.41 E-value=5.3e-12 Score=123.19 Aligned_cols=223 Identities=18% Similarity=0.250 Sum_probs=145.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
+.+|+..|++++++ |++ ++||.||+++..+.. ...+..+...+|++... +++.++.+|++++.|+..|..+|++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~~-~~~~r~~~~~~Gl~~~~-p~~tV~~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGPG-GNVARLSALEAGLGLHI-PGVTIDRQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCCc-chHHHHHHHHcCCCCCC-CceehhhhhhHHHHHHHHHHHHHHCC
Confidence 78999999999865 886 899999998875421 33455688999998433 38899999999999999999999999
Q ss_pred CCCeEEEEEeeccccc-cC-CC-------CCC---------------Cchh-----------------------------
Q 016111 182 PGARVLVVCSDLSLGT-FR-GP-------SDA---------------NLGC----------------------------- 208 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-~~-~~-------~~~---------------~~~~----------------------------- 208 (395)
..+.+|+++.|.+|.. +. .. .+. ++++
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998741 10 00 000 0000
Q ss_pred ------h-h--------h--hhh--------------hccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccc
Q 016111 209 ------L-A--------G--QAL--------------FGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVA 256 (395)
Q Consensus 209 ------~-~--------~--~~~--------------fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~ 256 (395)
. . . ..+ .+|||+|+||.+.+.. ..+..+..++........
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~~~~~~~-------- 251 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVRSAVVGV-------- 251 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEEEEEecc--------
Confidence 0 0 0 011 2566666666653321 000111222322211100
Q ss_pred eEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHH---HHHH
Q 016111 257 GQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSAT---RHVL 332 (395)
Q Consensus 257 ~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~---~~~~ 332 (395)
..... ......+++++|+++|+++ +|| +|.+|+.+........+.||++.+++..+ ....
T Consensus 252 ------------~~~~~---~~~~~~a~~~al~~Agl~~-~Did~~ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~G 315 (361)
T PRK06690 252 ------------DPNLP---GTGPIFAVNKLLNEMNMKV-EDIDYFEINEAFASKVVACAKELQIPYEKLNVNGGAIALG 315 (361)
T ss_pred ------------Ccccc---hhHHHHHHHHHHHHcCCCH-HHcCEeeecchhHHHHHHHHHhcCCCchhcccCCcHHhcc
Confidence 00000 1233468889999999997 999 99999999999999999999988776441 0013
Q ss_pred HhcCCCccchHHHHHHHHHHh
Q 016111 333 SEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 333 ~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..+|++|...++..+.++.++
T Consensus 316 hp~GatG~~~~~~~~~ql~~~ 336 (361)
T PRK06690 316 HPYGASGAMLVTRLFYQAKRE 336 (361)
T ss_pred CchhhhHHHHHHHHHHHHHHh
Confidence 466777777777777766543
No 92
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.41 E-value=3.3e-11 Score=119.65 Aligned_cols=213 Identities=12% Similarity=0.071 Sum_probs=141.3
Q ss_pred CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc--------------cCCCCCC
Q 016111 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT--------------FRGPSDA 204 (395)
Q Consensus 139 ~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~--------------~~~~~~~ 204 (395)
..+.+|+..||+... .+.+..+|++++.||..|..+|++|.++.|||+++|..+.. ...|.+.
T Consensus 138 ~~a~~ia~~lgl~Gp---~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd~ 214 (392)
T PRK09185 138 SLADFLRAYLGLSGP---AYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFSA 214 (392)
T ss_pred HHHHHHHHHhCCCCC---cccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCcC
Confidence 577899999999864 67889999999999999999999999999999999964321 1113222
Q ss_pred CchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHH
Q 016111 205 NLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCL 284 (395)
Q Consensus 205 ~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i 284 (395)
+ ..++++||||+++||++.... ..++.+.+....... .. .++ + ....+.+++
T Consensus 215 ~----~~G~~~gEGaa~vVLe~~~~~------~~~I~g~g~~~d~~~---~~---~~~-------~-----~~~~~~~a~ 266 (392)
T PRK09185 215 N----RDGINIGEAAAFFLLEREDDA------AVALLGVGESSDAHH---MS---APH-------P-----EGLGAILAM 266 (392)
T ss_pred C----CCccceeceEEEEEEEEcCCC------cEEEEEEEEeCCCCC---CC---CCC-------C-----CHHHHHHHH
Confidence 1 247899999999999987321 234544332110000 00 000 0 012344788
Q ss_pred HHhhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcC
Q 016111 285 DEAFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358 (395)
Q Consensus 285 ~~~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g 358 (395)
+++|+++|+++ +|| ++.+|-.+.. -...+.+.++-.. .+ .+ +-..+||+.+|+-.+.|...+.. .++|
T Consensus 267 ~~Al~~Agl~~-~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv-~s--~K~~~Gh~~~AaG~~~l~~~~~~-l~~~ 340 (392)
T PRK09185 267 QQALADAGLAP-ADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PC-SS--TKGLTGHTLGAAGAVEAAICWLA-LRHG 340 (392)
T ss_pred HHHHHHcCCCH-HHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-ce-eC--CCcccccChhhcchHHHHHHHHH-HhcC
Confidence 99999999997 999 8899976544 2445566666321 11 12 34678999999988777665432 1112
Q ss_pred CccC---------C------------CCCceEEEEEEccchhhhheeeeec
Q 016111 359 KVTT---------G------------EGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 359 ~i~~---------G------------~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+.+ . ...++++..+||.|.+-++++|+..
T Consensus 341 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~~~ 391 (392)
T PRK09185 341 LPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFGRA 391 (392)
T ss_pred CCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEEeC
Confidence 2211 0 0025788999999999999999864
No 93
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.40 E-value=1.9e-11 Score=121.70 Aligned_cols=252 Identities=17% Similarity=0.209 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHhCCCC-CCc----CEEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSK-SQI----THLIFCSLVG-V-------------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~-~~I----d~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lg 149 (395)
...|+..|+++||+++|+.. ..+ -.|+++++.+ . .+| ..+.+|+..+|
T Consensus 73 ~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 152 (405)
T PRK09116 73 VSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFG 152 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhC
Confidence 46799999999999999842 212 2566665432 0 122 25778999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc--------------------cCCCCCCCchhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT--------------------FRGPSDANLGCL 209 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~--------------------~~~~~~~~~~~~ 209 (395)
+... .+.+..+|++++.||..|..+|++|..+.+||.++|..+.. ...|.+.+
T Consensus 153 ~~Gp---~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~---- 225 (405)
T PRK09116 153 LKGR---VIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDAN---- 225 (405)
T ss_pred CCCC---cccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCC----
Confidence 9986 57899999999999999999999999999999999974320 00122221
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+.. ..+....-++...+... ++.++. .+. ...+.++++++|
T Consensus 226 ~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~--------------d~~~~~-~p~-----~~~~~~ai~~AL 285 (405)
T PRK09116 226 RDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNS--------------DGAHVT-QPQ-----AETMQIAMELAL 285 (405)
T ss_pred CCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcC--------------CCCcCC-CCC-----HHHHHHHHHHHH
Confidence 248999999999999974331 00011223444332110 010000 011 233557889999
Q ss_pred ccCCCCCCCce-EEEEcCCCh-----HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGP-----AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~-----~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+++ +|| ++.+|-.+. .-.+.+.+.+|- +++.+ .+-..+||+.+|+-.+.+...+.. .+++.+.|
T Consensus 286 ~~Agi~p-~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~---~~pv~-s~K~~~GH~~~AaG~~~~~~~~~~-l~~~~ipp 359 (405)
T PRK09116 286 KDAGLAP-EDIGYVNAHGTATDRGDIAESQATAAVFGA---RMPIS-SLKSYFGHTLGACGALEAWMSIEM-MNEGWFAP 359 (405)
T ss_pred HHhCCCH-HHcCEEECcCccCCCCCHHHHHHHHHHhCC---CCeeE-CcchhhcccHHHHHHHHHHHHHHH-HHcCccCC
Confidence 9999998 999 889997544 345566777772 22221 145789999888766655443321 11122111
Q ss_pred ------------------CC----CCceEEEEEEccchhhhheeee
Q 016111 363 ------------------GE----GLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 363 ------------------G~----~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+. +.+++|..+||-|..-++++|+
T Consensus 360 t~~~~~~~~~~~~l~~v~~~~~~~~~~~~l~nsfGfGG~n~~lvl~ 405 (405)
T PRK09116 360 TLNLTQVDPACGALDYIMGEAREIDTEYVMSNNFAFGGINTSLIFK 405 (405)
T ss_pred CCCCCCCCCCCcccCccCCCCccCCCCEEEEeeecCCcccEEEEEC
Confidence 00 0156888999999988888875
No 94
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.40 E-value=2e-11 Score=122.34 Aligned_cols=95 Identities=14% Similarity=0.112 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++..+. ..+..+..++..+|++... +++.++.+|++++.|+..|.++|+
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~-P~~tV~~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVSRACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCC-cceeehhhhHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999987652 2244666788999998533 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.||+++.|++|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999998874
No 95
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.39 E-value=2.7e-11 Score=120.85 Aligned_cols=254 Identities=17% Similarity=0.172 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC----------------------C----CCC-CHHHHHHHHcCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG----------------------V----DMP-GADYQLTKMLGL 150 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~----------------------~----~~p-~~a~~l~~~Lgl 150 (395)
...|+..|+++||+++|+++++++ .+++++... + ..+ ..+.+|+..+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 478999999999999999987776 455544321 0 112 467889999999
Q ss_pred CCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------cc----------CCCCCCCchhh
Q 016111 151 NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TF----------RGPSDANLGCL 209 (395)
Q Consensus 151 ~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~----------~~~~~~~~~~~ 209 (395)
... .+.+..+|++++.||..|..+|++|.++.+||+++|.... .+ ..|.|. .
T Consensus 152 ~Gp---~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~----~ 224 (406)
T PRK08439 152 KGP---NLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDK----D 224 (406)
T ss_pred CCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccC----C
Confidence 975 5778899999999999999999999999999999996311 00 112222 1
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++||||+++||++.+.. ..+....-++...+.. . + +.++. .+. .+...++++++|
T Consensus 225 ~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~----~-d---------~~~~~-~p~-----~~~~~~a~~~al 284 (406)
T PRK08439 225 RDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGES----G-D---------ANHIT-SPA-----PEGPLRAMKAAL 284 (406)
T ss_pred CCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEcc----C-C---------CCCCC-CCC-----HHHHHHHHHHHH
Confidence 247899999999999975431 0001112233322210 0 0 00000 011 124457888999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT 362 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~ 362 (395)
+++|+ ++| ++-.|-.+.+ -.+.+.+.++-.....+.+ .+-..+||+.+|+-.+.+...+.. .+++.+.|
T Consensus 285 ~~ag~---~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~-s~K~~~Gh~~~AsG~~~~~~~~~~-l~~~~ipp 359 (406)
T PRK08439 285 EMAGN---PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVS-STKGQIGHCLGAAGAIEAVISIMA-MRDGILPP 359 (406)
T ss_pred HHcCC---CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEE-CcccccccCchhhhHHHHHHHHHH-HhCCeeCC
Confidence 99986 466 8888875543 3455566666432222221 134569999999977765443221 11132111
Q ss_pred -----------------C----CCCceEEEEEEccchhhhheeeee
Q 016111 363 -----------------G----EGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -----------------G----~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+ .+...+|.-+||.|.+-++++|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~n~~lvl~~ 405 (406)
T PRK08439 360 TINQETPDPECDLDYIPNVARKAELNVVMSNSFGFGGTNGVVIFKK 405 (406)
T ss_pred CCCCCCCCCCCCcccCCCccccCCCCEEEEeeecCCCceEEEEEec
Confidence 0 012568889999999999999874
No 96
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.39 E-value=1.4e-11 Score=121.97 Aligned_cols=95 Identities=14% Similarity=0.062 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+..|++++|++ +|+++++||.||+++..+ ...+..+..+...+|++... +++.++++|+|++.|+.+|.++
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~v-p~~tV~~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGV-PGSTINRLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEeccchhHHHHHHHHHHH
Confidence 3789999999999997 599999999999998775 22367889999999999754 4899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999885
No 97
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=99.38 E-value=2.2e-11 Score=120.64 Aligned_cols=94 Identities=16% Similarity=0.065 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.|++++..+ ...+..+..++..+|++... +.+.++.+|++++.++..|.++|+
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~-p~~~v~~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGV-TKYTVNVVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCC-cceeeechhhHHHHHHHHHHHHHh
Confidence 3789999999999999999999999999887654 22234567789999998532 277888999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.||+++.|++|
T Consensus 104 sG~~d~vla~G~e~ms 119 (388)
T PRK06366 104 LGERDLVIAGGMENMS 119 (388)
T ss_pred cCCCCEEEEEeeEccc
Confidence 9999999998889876
No 98
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.38 E-value=2.1e-11 Score=122.68 Aligned_cols=259 Identities=13% Similarity=0.086 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHhCCCC-----CCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSK-----SQITHLIFCSLVG-V-------------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~-----~~Id~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lg 149 (395)
...|+..|+.+||+++|+++ .+...|+++++.+ . ..+ ..+.+|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 45799999999999999854 2456788876532 1 011 24678999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc---------------c-------cCCCCCCCch
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG---------------T-------FRGPSDANLG 207 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~---------------~-------~~~~~~~~~~ 207 (395)
+... .+.+..+|++++.||..|..+|++|.++.+||.++|.... . ...|.+.
T Consensus 173 l~Gp---~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~--- 246 (437)
T PLN02836 173 FQGP---NHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDC--- 246 (437)
T ss_pred CCCc---eeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCccc---
Confidence 9875 6889999999999999999999999999999999886321 0 0112221
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
...++++||||+++||++.+.. ..+.....++...+.. ++. .+ + . .+.. -.....+++++
T Consensus 247 -~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~----~d~-~~--~-------~-~p~~---~~~~~~~a~~~ 307 (437)
T PLN02836 247 -DRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMS----GDA-HH--I-------T-QPHE---DGRGAVLAMTR 307 (437)
T ss_pred -CCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeec----CCC-CC--C-------c-CCCc---chHHHHHHHHH
Confidence 1247899999999999975431 0001123344433211 000 00 0 0 0000 11234467889
Q ss_pred hhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcC
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEG 358 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g 358 (395)
+|+++|+++ +|| ++-.|-.+... .+.+.+.++-.. ..++.+ .+-..+||+.+|+-.+.|...+.. .+++
T Consensus 308 Al~~Agi~~-~dId~ve~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~GH~~~AsG~~~li~~~l~-l~~~ 384 (437)
T PLN02836 308 ALQQSGLHP-NQVDYVNAHATSTPLGDAVEARAIKTVFSEHATSGGLAFS-STKGATGHLLGAAGAVEAIFSVLA-IHHG 384 (437)
T ss_pred HHHHcCCCH-hHcCEEEccCCcCcCcCHHHHHHHHHHhcccccCCCCeeE-CCcccccccHHHHHHHHHHHHHHH-HhcC
Confidence 999999997 999 88899765432 333555554211 112211 134678999988877655443221 1113
Q ss_pred CccC----------------------CCCCceEEEEEEccchhhhheeeeec
Q 016111 359 KVTT----------------------GEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 359 ~i~~----------------------G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+-| ..+...+|.-+||.|.+-++++|+..
T Consensus 385 ~ipp~~n~~~~~p~~~~~~~~~~~~~~~~~~~~l~nsfgfGG~na~lvl~~~ 436 (437)
T PLN02836 385 IAPPTLNLERPDPIFDDGFVPLTASKAMLIRAALSNSFGFGGTNASLLFTSP 436 (437)
T ss_pred ccCCCCCCCCCCCCCCcccCcccCCCCCCccEEEEecccCCCeeEEEEEecC
Confidence 2111 00124567778999999999998764
No 99
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.38 E-value=8.9e-11 Score=117.34 Aligned_cols=259 Identities=14% Similarity=0.169 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHHHhCC---CCCCcCEEEEEecCC-C-------------------------CCC-CHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQ---SKSQITHLIFCSLVG-V-------------------------DMP-GADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~---~~~~Id~vi~~s~t~-~-------------------------~~p-~~a~~l~~~Lgl~ 151 (395)
...|+..|+++||+++|+ +++.+. |++++..+ . .+| ..+.++...+|+.
T Consensus 83 ~~~~~l~aa~~AledAg~~~~~~~r~G-v~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~ 161 (418)
T PRK07910 83 LQRMSTVLGRRVWENAGSPEVDTNRLM-VSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK 161 (418)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccEE-EEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC
Confidence 456899999999999996 344444 44444421 0 111 3567788888888
Q ss_pred CccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----------c-CC-----CCCC-C-chhhhhhh
Q 016111 152 PSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----------F-RG-----PSDA-N-LGCLAGQA 213 (395)
Q Consensus 152 ~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----------~-~~-----~~~~-~-~~~~~~~~ 213 (395)
.. .+.+..+|++++.||..|.++|++|..+.+|+.++|..... . .. |... + .+....++
T Consensus 162 G~---~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~~G~ 238 (418)
T PRK07910 162 AG---VITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGF 238 (418)
T ss_pred CC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCCCCE
Confidence 75 57789999999999999999999999999999999974210 0 10 1100 0 11123589
Q ss_pred hhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCC
Q 016111 214 LFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFG 292 (395)
Q Consensus 214 ~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~g 292 (395)
++|||++++||++.+.. ..+.....++...+... +|.++.. ... ......++++++|+++|
T Consensus 239 v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~--------------dg~~~~~-~~~---~~~~~~~a~~~Al~~ag 300 (418)
T PRK07910 239 VFGEGGALMVIETEEHAKARGANILARIMGASITS--------------DGFHMVA-PDP---NGERAGHAMTRAIELAG 300 (418)
T ss_pred eeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEec--------------CCCCCCC-CCC---CHHHHHHHHHHHHHHhC
Confidence 99999999999975431 10011223444332111 1100000 000 01124468899999999
Q ss_pred CCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----
Q 016111 293 IKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---- 362 (395)
Q Consensus 293 l~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---- 362 (395)
+++ +|| ++-.|-.+.+ -.+.+.+.+|-..-.+. + +-..+||+.+|+-.+.|...+.. .+++.+.|
T Consensus 301 i~~-~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~-s--~K~~~GH~~~AaG~~~li~~~l~-l~~~~ipp~~n~ 375 (418)
T PRK07910 301 LTP-GDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAVY-A--PKSALGHSVGAVGAVESILTVLA-LRDGVIPPTLNL 375 (418)
T ss_pred CCH-HHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCcee-C--ccccccccHHHHHHHHHHHHHHH-HhcCccCCCCCC
Confidence 997 999 8889976643 35566777773211122 2 46789999999887776543221 11122111
Q ss_pred -------------CC----CCceEEEEEEccchhhhheeeee
Q 016111 363 -------------GE----GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 363 -------------G~----~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
+. +..+++.-+||.|.+-.+++|+.
T Consensus 376 ~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~~ 417 (418)
T PRK07910 376 ENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFGR 417 (418)
T ss_pred CCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEec
Confidence 00 12567888999999988888874
No 100
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=99.38 E-value=1.4e-11 Score=122.08 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++++|++ +|+++++||.|++++..+ ...+..+..+...+|++... +++.++++|++++.|+..|...
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~-p~~~V~~~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV-PGTTVNRLCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEeechhhhHHHHHHHHHHH
Confidence 3789999999999995 699999999999998764 32356778899999998643 3889999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHCCCCCEEEEeccccccC
Confidence 9999999999999999874
No 101
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=4.8e-11 Score=117.97 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=79.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-C-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-V-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.||+++..+ . ..+..+..+.-..|++... +++.++.+|+|++.|+..|.++|
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v-P~~tV~~~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV-PGTSIDRQCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC-ceEEEechhhHHHHHHHHHHHHH
Confidence 3789999999999999999999999999987764 2 2234444444444776443 48899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+|+++.|++|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999874
No 102
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=99.37 E-value=2.2e-11 Score=120.78 Aligned_cols=95 Identities=13% Similarity=0.052 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++++|++ +|+++++||.|++++..+ .. .+..+..+...+|++... +++.++.+|++++.|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~v-P~~tV~~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSV-PGTTINRLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCC-ceEEEecccccHHHHHHHHHHH
Confidence 3789999999999995 799999999999998765 22 356777899999997644 4899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999874
No 103
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.35 E-value=4.5e-11 Score=118.88 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=161.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-----------------C----C----C-CHHHHHHHHcC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-----------------D----M----P-GADYQLTKMLG 149 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-----------------~----~----p-~~a~~l~~~Lg 149 (395)
....|+..|+.+||+++|+++++++ .|+++++.+ + . . + ..+.+|+..+|
T Consensus 70 ~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (399)
T cd00832 70 RMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHG 149 (399)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhC
Confidence 3567999999999999999876543 466665432 1 0 1 1 24678999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------ccC---------CCCCCCchhh
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TFR---------GPSDANLGCL 209 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~~---------~~~~~~~~~~ 209 (395)
+... ++.+..+|++++.||..|.++|++|. +.+|+.++|.... .+. .|.|. .
T Consensus 150 l~Gp---~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~----~ 221 (399)
T cd00832 150 MRGP---SGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDA----A 221 (399)
T ss_pred CCCC---cccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcC----C
Confidence 9976 57889999999999999999999999 9999999987321 010 12221 1
Q ss_pred hhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
..++++|+||+++||++.+... .+....-++...+....+.. ... ....+.++|+++|
T Consensus 222 ~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~----------------~~~-----~~~~~~~a~~~al 280 (399)
T cd00832 222 AAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPP----------------GSG-----RPPGLARAIRLAL 280 (399)
T ss_pred CCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCC----------------CCC-----CHHHHHHHHHHHH
Confidence 3589999999999999864320 00112234443332111100 000 0234567899999
Q ss_pred ccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCcc-
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVT- 361 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~- 361 (395)
+++|+++ ++| ++..|-.+.. -.+.+.+.+|-. +++.+ .+-..+||+.+|+-.+.|...+.. .+++.+.
T Consensus 281 ~~ag~~~-~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~--~~pv~-s~K~~~Gh~~~aaG~~~l~~~~l~-l~~~~ipp 355 (399)
T cd00832 281 ADAGLTP-EDVDVVFADAAGVPELDRAEAAALAAVFGPR--GVPVT-APKTMTGRLYAGGAPLDVATALLA-LRDGVIPP 355 (399)
T ss_pred HHcCCCH-HHccEEEeccCcCCCCCHHHHHHHHHHhCCC--CCcee-CCCchhcchHHHHHHHHHHHHHHH-HhCCCcCC
Confidence 9999997 999 8889975543 345566667632 22221 134678999999998888764421 1112211
Q ss_pred ---------------------CCCCCceEEEEEEccchhhhheee
Q 016111 362 ---------------------TGEGLEWGVMFGIGAGVTVDTVVL 385 (395)
Q Consensus 362 ---------------------~G~~~d~vll~~~G~G~s~~a~ll 385 (395)
+. ..++++..+||.|..-++++|
T Consensus 356 ~~n~~~~~p~~~l~~v~~~~~~~-~~~~al~nsfgfGG~na~lvl 399 (399)
T cd00832 356 TVNVTDVPPAYGLDLVTGRPRPA-ALRTALVLARGRGGFNSALVV 399 (399)
T ss_pred CCCCCCCCCCCCcccCCCcccCC-CCCEEEEeccCCCCcceEEEC
Confidence 11 126788888998877766654
No 104
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.35 E-value=1.3e-10 Score=115.13 Aligned_cols=248 Identities=15% Similarity=0.091 Sum_probs=157.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C-------------------------------------CCC-
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V-------------------------------------DMP- 138 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~-------------------------------------~~p- 138 (395)
...|+..|+++||+++|++..+.+ .|+++++.+ . .+|
T Consensus 73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 152 (398)
T PRK06519 73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN 152 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence 567999999999999999643322 345555432 1 011
Q ss_pred CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc----------ccCCCCCCCc-h
Q 016111 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG----------TFRGPSDANL-G 207 (395)
Q Consensus 139 ~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~----------~~~~~~~~~~-~ 207 (395)
..+.+|+..+|+... .+.+..+|++++.||..|..+|++|..+.+||.++|.... .+.......+ .
T Consensus 153 ~~a~~is~~~gl~Gp---~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~~ 229 (398)
T PRK06519 153 LLAGNISIVHKVTGS---SRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPVW 229 (398)
T ss_pred HHHHHHHHHhCCCCc---cccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCchh
Confidence 256788999999985 5788999999999999999999999999999999986321 0110000000 1
Q ss_pred h----hhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHH
Q 016111 208 C----LAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEK 282 (395)
Q Consensus 208 ~----~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 282 (395)
+ ...++++|+||+++||++.+.. ..+....-++...+....+ . -...+.+
T Consensus 230 d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d~~~--------------------~-----~~~~~~~ 284 (398)
T PRK06519 230 SRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESDRAR--------------------R-----APGDLEA 284 (398)
T ss_pred ccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeecCCC--------------------C-----ChHHHHH
Confidence 1 1358999999999999986531 0001122344433211000 0 0113457
Q ss_pred HHHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 283 CLDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 283 ~i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
+|+++|+++|+ + +|| ++..|-.+.+. .+.+.+.+++|. . + +-..+||+.+|+-.+.+.-.+.. .+
T Consensus 285 am~~AL~~Agl-~-~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pv---s-S--~Ks~~GH~l~AAGa~e~i~~~la-l~ 355 (398)
T PRK06519 285 SLERLLKPAGG-L-AAPTAVISGATGAHPATAEEKAALEAALAGPV---R-G--IGTLFGHTMEAQFPLGLALAALS-VS 355 (398)
T ss_pred HHHHHHHHCCC-c-ccCCEEEeCCCCCCCccHHHHHHHHHHcCCCc---c-c--cchhhccchHHHHHHHHHHHHHH-Hh
Confidence 89999999999 7 899 88999766443 555667777642 2 2 46789999999988877654432 11
Q ss_pred cCCccCCCC----------CceEEEEEEccchhhhheeee
Q 016111 357 EGKVTTGEG----------LEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 357 ~g~i~~G~~----------~d~vll~~~G~G~s~~a~ll~ 386 (395)
+|.+-|--+ ....|.+++|-|-.-|..+++
T Consensus 356 ~g~vpp~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (398)
T PRK06519 356 KGALFPPFDASGEKPMSGAAREAVVTTVGHWRGEGMALVE 395 (398)
T ss_pred cCccCCCCCCCcccCccccccEEEEEeeccCCcceeEEEE
Confidence 244432211 123677777766554555543
No 105
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=7e-11 Score=117.18 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
++.+|+.+|++++|+++|+++++||.|++++..+ ...+..+..+...+|++... +++.++.+|++++.|+..|.+.|
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~-p~~tV~~~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV-PGQTVNRLCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC-ceeeeechhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999998754 22355677788999998543 38899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999874
No 106
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=99.32 E-value=1e-10 Score=116.97 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++..+. ..+..+..+.-..|++... +++.++++|++++.|+.+|..+|+
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~-p~~~V~~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT-DAYSVTRACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC-chhhhhhhhhHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999987652 2234555555557998443 388999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.+|+++.|++|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999973
No 107
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.31 E-value=3.1e-10 Score=112.92 Aligned_cols=253 Identities=18% Similarity=0.137 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-C--------------------------CCC-CHHHHHHHHc
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-V--------------------------DMP-GADYQLTKML 148 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~--------------------------~~p-~~a~~l~~~L 148 (395)
....|+..|++++|+++|+++.+.+ .|+++++.+ . ..+ ..+.+|+..+
T Consensus 70 r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~ 149 (406)
T PRK07967 70 DASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPF 149 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHH
Confidence 3567899999999999998754332 355555321 0 111 3678899999
Q ss_pred CCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc----c-----------------CCCCCCCch
Q 016111 149 GLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT----F-----------------RGPSDANLG 207 (395)
Q Consensus 149 gl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~----~-----------------~~~~~~~~~ 207 (395)
|++.. .+.+..+|++++.||..|..+|++|..+.+||.++|..+.. | ..|.+.+
T Consensus 150 ~l~Gp---~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~-- 224 (406)
T PRK07967 150 KIKGV---NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDAN-- 224 (406)
T ss_pred CCCCC---ccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCC--
Confidence 99986 57899999999999999999999999999999999864321 0 0122221
Q ss_pred hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHH
Q 016111 208 CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDE 286 (395)
Q Consensus 208 ~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~ 286 (395)
..+++.|+||+++||++.+.. ..+.+...++...+... ++.++. .+. ...+.+++++
T Consensus 225 --r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~--------------d~~~~~-~p~-----~~~~~~a~~~ 282 (406)
T PRK07967 225 --RDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATS--------------DGYDMV-APS-----GEGAVRCMQM 282 (406)
T ss_pred --CCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECC--------------CCCCCC-CCC-----HHHHHHHHHH
Confidence 248999999999999975431 00011223444433211 111000 010 2334567888
Q ss_pred hhccCCCCCCCce-EEEEcCCChH-----HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 287 AFSPFGIKDWNSL-FWIVQPGGPA-----IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 287 ~L~~~gl~~~~di-~~i~hq~~~~-----~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
+|+..+ .|| ++..|-.+.+ -.+.+.+.+|-. .++.+ .+-..+||+.+|+-.+.|...+.. .+++.+
T Consensus 283 Al~~~~----~~Idyi~aHgtGT~~~D~~E~~Ai~~~fg~~--~~~v~-s~K~~~GH~~~AaG~~e~i~~~la-l~~~~i 354 (406)
T PRK07967 283 ALATVD----TPIDYINTHGTSTPVGDVKELGAIREVFGDK--SPAIS-ATKSLTGHSLGAAGVQEAIYSLLM-MEHGFI 354 (406)
T ss_pred HHhCCC----CCccEEEcCCCCCCCCCHHHHHHHHHHhCCC--CCeeE-CcccccccCccccchHHHHHHHHH-HhcCcC
Confidence 887644 267 8889975543 345566777632 21221 135689999999887766433221 111221
Q ss_pred cC---------C-------------CCCceEEEEEEccchhhhheeeeec
Q 016111 361 TT---------G-------------EGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 361 ~~---------G-------------~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
-| . .....++..+||.|.+-++++|+..
T Consensus 355 Ppt~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sfgfGG~n~~lvl~~~ 404 (406)
T PRK07967 355 APSANIEELDPQAAGMPIVTETTDNAELTTVMSNSFGFGGTNATLVFRRY 404 (406)
T ss_pred CCCCCCCCCCccccCCCccCCCCcCCCCCEEEEecccCCCeeEEEEEEec
Confidence 11 0 0125688899999999999998753
No 108
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=6.9e-11 Score=116.95 Aligned_cols=254 Identities=13% Similarity=0.089 Sum_probs=156.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|+.+|++++|+++|+++++||.|++++... ...+..+..+.-.+|++... +.+.++.+|++++.++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~-p~~~v~~acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV-PGVTVDRQCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC-ceeeecchhhhHHHHHHHHHHHH
Confidence 3789999999999999999999999999875422 11122334333456775433 36778999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc-cc-CC--------C-----CCCCchhhh---------------------------------
Q 016111 179 ENNPGARVLVVCSDLSLG-TF-RG--------P-----SDANLGCLA--------------------------------- 210 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~-~~-~~--------~-----~~~~~~~~~--------------------------------- 210 (395)
++|.++.|||++.|.++. .+ .. . .+..+.+..
T Consensus 104 ~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~ 183 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVSQFRGAELIAEKWGISREEMERFALESH 183 (382)
T ss_pred HCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 999999999999986643 00 00 0 000000000
Q ss_pred --------------------------------------hhhhh-------------ccccEEEEEecCCCC-CCCCCCce
Q 016111 211 --------------------------------------GQALF-------------GDGAAALIIGANPDT-TLSEKPLF 238 (395)
Q Consensus 211 --------------------------------------~~~~f-------------GDgAaA~vl~~~~~~-~~~~~~~~ 238 (395)
...++ +|||+|+||.+.+.. ..+..+..
T Consensus 184 ~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~ 263 (382)
T PRK07801 184 RRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRA 263 (382)
T ss_pred HHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccE
Confidence 00111 355555555543210 00000111
Q ss_pred EEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHH
Q 016111 239 QIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAK 317 (395)
Q Consensus 239 ~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~ 317 (395)
++.+.. ....... .........++++++++|+++ +|| ++=+|-.-....-...+.
T Consensus 264 ~i~~~~---------------------~~~~~~~--~~~~~~~~a~~~a~~~agi~~-~did~~e~~d~Fa~~~~~~~e~ 319 (382)
T PRK07801 264 RIHHLS---------------------VRGDDPV--FMLTAPIPATRYALEKTGLSI-DDIDVVEINEAFAPVVLAWLKE 319 (382)
T ss_pred EEEEEE---------------------EecCChH--hhccChHHHHHHHHHHcCCCH-HHcCEeeecccchHHHHHHHHH
Confidence 222110 0000000 011111357889999999997 999 888888776777777889
Q ss_pred cCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeee
Q 016111 318 LGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 318 lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
||+.++++-.+ --.-.+||...|+-...+.++.++.. + .|. .+.+....|.|.+..+++|+.
T Consensus 320 lG~~~~pvN~~-GG~l~~Ghp~gasG~~~~~e~~~qL~--~---~~~--~~gl~~~~gggg~~~~~vl~~ 381 (382)
T PRK07801 320 TGADPAKVNPN-GGAIALGHPLGATGAKLMTTLLHELE--R---TGG--RYGLQTMCEGGGTANVTIIER 381 (382)
T ss_pred hCCCchhcCCC-cchhhhcCcHHHHHHHHHHHHHHHHH--h---cCC--CEEEEEEcccccceeEEEEEe
Confidence 99988776443 23566899999999998888887622 1 231 455555566566656666653
No 109
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=99.29 E-value=1.8e-10 Score=113.90 Aligned_cols=95 Identities=7% Similarity=-0.010 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
++.+|+.+|++.+|++ +|+++++||.|++++..+ .. .+..+..+.-..|++... +++.++.+|++++.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~-p~~tV~~~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS-AAVTVNRLCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc-chhhhhhhhHHHHHHHHHHHHH
Confidence 3789999999999996 599999999999997754 21 234556666677888754 4889999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999998874
No 110
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=99.28 E-value=3.9e-10 Score=112.05 Aligned_cols=93 Identities=18% Similarity=0.088 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|++++|||.|++++... +........+.+.+|+++.+ +..++.+|++++.++..|...|+
T Consensus 26 ~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~~~--~~~v~~~c~sg~~ai~~A~~~I~ 103 (398)
T PRK06157 26 GAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPNIP--VTRVENFCATGSEAFRGAVYAVA 103 (398)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCCCC--EEEEecccHHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999877543 21122236788899998643 77899999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.||++++|+++
T Consensus 104 sG~~d~vlv~G~e~~s 119 (398)
T PRK06157 104 SGAYDIALALGVEKLK 119 (398)
T ss_pred CCCCCEEEEEEEeecc
Confidence 9999999999999865
No 111
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=99.27 E-value=1.9e-10 Score=106.10 Aligned_cols=247 Identities=15% Similarity=0.171 Sum_probs=137.7
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
|++....|..+|++.+|++++++++|||+++-+--.... -.+...++.|++| ++.+..+|+++..+|.+|..+
T Consensus 47 wEkAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~--i~s~f~ar~l~iP-----f~GlygACST~~e~l~laa~~ 119 (329)
T PF07451_consen 47 WEKAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI--ISSSFAARDLGIP-----FLGLYGACSTMMESLALAAML 119 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC--CHHHHHHHHHT-------EEEB--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh--HHHHHHHHhcCCC-----ccchhhHHHHHHHHHHHHHHH
Confidence 556678899999999999999999999999866543333 3568999999987 578899999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc---ccCCCCCCCchhhhhhhhhccccEEEEEecCCCCCCCCCCceEEEeeeeeecCCCcCc
Q 016111 178 AENNPGARVLVVCSDLSLG---TFRGPSDANLGCLAGQALFGDGAAALIIGANPDTTLSEKPLFQIVSGAQTILPGSDSD 254 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~---~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 254 (395)
+..|-.++||+.++-.... .|+.|.+.--+.+.+...---||+|+||++.... +...-.+.+..
T Consensus 120 vdgg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~tAqwTVTGaGa~il~~~~~~-----p~It~~T~GkV-------- 186 (329)
T PF07451_consen 120 VDGGFADYVLAATSSHFATAERQFRFPTEYGGQRPPTAQWTVTGAGAAILSKEGSG-----PRITHATIGKV-------- 186 (329)
T ss_dssp HHTTS-SEEEEEEEE-CCHHHHHT---GGGT----TT--EE--EEEEEEEESS--S-----EEEEEEE------------
T ss_pred HhCCCcceEEEEeccccchhhhhccCchhccCCCCCcccEEEeceEEEEEecCCCC-----cEEEEEEEEEE--------
Confidence 9999999999999888752 3554543221222345555679999999987653 12222222211
Q ss_pred cceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc---CCChHHHHHHHHHcCCCccchhHHHH
Q 016111 255 VAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ---PGGPAIVNQIEAKLGLKQQKLSATRH 330 (395)
Q Consensus 255 ~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h---q~~~~~~~~i~~~lgi~~e~~~~~~~ 330 (395)
+++.+.+. +.||.- +.....+.|.+.|++.|.++ +|. .++-- ..+..+++.+.++-|++.++.+...-
T Consensus 187 vD~G~~D~---~nMGaA----MAPAA~dTI~~h~~D~g~~p-~dYDlIvTGDLg~vG~~il~~Ll~~~G~~i~~~~~DCG 258 (329)
T PF07451_consen 187 VDMGIKDP---NNMGAA----MAPAAADTIEQHFKDTGRSP-DDYDLIVTGDLGKVGRKILRDLLKEKGYDISENYNDCG 258 (329)
T ss_dssp B-SS---T---T-HHHH----HHHHHHHHHHHHHHHCT--G-GG-SEEEESS-HHHHHHHHHHHHHHTT---GGGEEEHH
T ss_pred EEcCCCCc---ccchhh----HhHHHHHHHHHHHHHhCCCh-hhcCeEEecchHHHHHHHHHHHHHHcCCCCccccccCC
Confidence 11111111 123222 22233456788899999997 888 66544 35678999999998988766322100
Q ss_pred --HH----Hh--cCCCccchHHHHHH-HHHHhhhhcCCccCCCCCceEEEEEEccchh
Q 016111 331 --VL----SE--YGNMGGVSVFFILD-EIRRKSAEEGKVTTGEGLEWGVMFGIGAGVT 379 (395)
Q Consensus 331 --~~----~~--~Gn~~sas~~i~L~-~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s 379 (395)
++ +. -|-.|++..-..+. +++++ .++|++ .+||+++.|+=+|
T Consensus 259 ~~iyd~~~Qdv~aGGSGcgCSA~V~~g~ll~~-l~~g~~------krvL~vaTGALlS 309 (329)
T PF07451_consen 259 LMIYDPEKQDVHAGGSGCGCSAVVLCGYLLPK-LRKGEL------KRVLFVATGALLS 309 (329)
T ss_dssp HCSS-TT-S--TT-EESHHHHHHHHHHCHHHH-HHTTS-------SEEEEEEEEE---
T ss_pred eEeecCCccccccCCCCcchHHHHHHHHHHHH-HHcCCc------eEEEEEEchhhcC
Confidence 00 11 13444444444444 44443 222443 5899999997443
No 112
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.27 E-value=2.2e-10 Score=113.28 Aligned_cols=94 Identities=12% Similarity=0.062 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHH-hCCCCCCcCEEEEEecCC-CC-CCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKE-WGQSKSQITHLIFCSLVG-VD-MPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~-ag~~~~~Id~vi~~s~t~-~~-~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
..+|+..+++++|++ +|+++++||.|++++..+ .. .+..+..+...+|++... +++.++.+|++++.|+..|..+|
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~-p~~~V~~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSV-PAVTVNRLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCC-cceeeechhHHHHHHHHHHHHHH
Confidence 789999999999996 799999999999987755 22 244567788899998533 37899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+|+++.|++|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999998864
No 113
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=4.6e-10 Score=112.44 Aligned_cols=92 Identities=14% Similarity=0.035 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHH-HHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGAD-YQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a-~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|++++|||.|++++... ...+..+ ..++..||+++.+ +..++.+|+++..|+..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~~~--~~~v~~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVPKP--SKRIEGGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCCCc--eEEEeCCcHHHHHHHHHHHHHHH
Confidence 579999999999999999999999988765443 2222223 4467999998754 78899999999999999999999
Q ss_pred cCCCCeEEEEEeeccc
Q 016111 180 NNPGARVLVVCSDLSL 195 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s 195 (395)
+|.++.|||++.|+.+
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999764
No 114
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=99.21 E-value=9.5e-10 Score=111.99 Aligned_cols=261 Identities=17% Similarity=0.139 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHHHhCCC--CCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQS--KSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~--~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
..+|+.+|+++||+++|++ +++||.|++++............++++||+.+.+ ......||++...++..|...|+
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p~~--~~~~~~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADPAR--TVYSPVGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCCcc--eeEecCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999 9999999987653322223458899999997654 44466788899999999999999
Q ss_pred cCCCCeEEEEEeeccccc---------------------------------cC------CCC------------------
Q 016111 180 NNPGARVLVVCSDLSLGT---------------------------------FR------GPS------------------ 202 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~~---------------------------------~~------~~~------------------ 202 (395)
+|.++.|||+++|+.+.. +. .|.
T Consensus 105 sG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~G~~~p~~~yal~a~ay~~~~G~t~ 184 (498)
T PRK08257 105 AGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASPAELRHGLDRPVYVYPLFENALRAALGRSP 184 (498)
T ss_pred CCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccchhhhhcCCCCcchHHHHHHHHHHHHhCcCH
Confidence 999999999999975321 00 000
Q ss_pred -C---------------------------CCchhhh----------------hhh-hhccccEEEEEecCCCC-CCC--C
Q 016111 203 -D---------------------------ANLGCLA----------------GQA-LFGDGAAALIIGANPDT-TLS--E 234 (395)
Q Consensus 203 -~---------------------------~~~~~~~----------------~~~-~fGDgAaA~vl~~~~~~-~~~--~ 234 (395)
+ .+.++.. ... ...|||+|+||.+.+.. ..+ .
T Consensus 185 e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ldca~~~~DGaaAvil~S~e~A~~l~~~~ 264 (498)
T PRK08257 185 EEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPE 264 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccHhhcCCCCcccceEEEEeeHHHHHhcCCCC
Confidence 0 0000000 011 25788888888764321 110 0
Q ss_pred CCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH
Q 016111 235 KPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ 313 (395)
Q Consensus 235 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~ 313 (395)
.....+...+....+.. +.. ..++. ....+..+.+++++++|+++ +|| .+=+|-.-......
T Consensus 265 ~~~V~i~g~a~~~~~~~-------~~~-------r~~~~--~~~~~~~aa~~a~~~AGi~~-~Did~~elydcF~~~~~~ 327 (498)
T PRK08257 265 DRWVYLHGGADAHDPYD-------ILE-------RPDLH--RSPAIRAAGRRALALAGLGI-DDIDAFDLYSCFPSAVQV 327 (498)
T ss_pred CceEEEEEEEEeeCccc-------ccc-------ccccc--cChHHHHHHHHHHHHhCCCH-HHCCEEEeccCCHHHHHH
Confidence 01222322221111100 000 00000 01123357889999999997 999 88888877777777
Q ss_pred HHHHcCCCcc-chhHH-HHHHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhh-hheeeeec
Q 016111 314 IEAKLGLKQQ-KLSAT-RHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTV-DTVVLRSF 388 (395)
Q Consensus 314 i~~~lgi~~e-~~~~~-~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~-~a~ll~~~ 388 (395)
..+.||+..+ +.+.| -.=+..+||.+.+.-+..+.++.++.. | +++ ...|+.+.|.-++. ...+|...
T Consensus 328 ~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLR--g--~~~---~~gLv~~~GG~~~~~~~~vl~~~ 398 (498)
T PRK08257 328 AARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLR--A--NPG---RRGLVTANGGYLTKHSVGVYSTE 398 (498)
T ss_pred HHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHh--h--cCC---CEEEEECCCChhhceEEEEEeCC
Confidence 8899999765 22221 013567899999998888888777521 1 134 67777777743332 23344443
No 115
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=3e-09 Score=104.82 Aligned_cols=229 Identities=17% Similarity=0.073 Sum_probs=142.5
Q ss_pred hHHHHHHHHHHHHHHHhC-CCC-CCcCEEEEEecCCC-CCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWG-QSK-SQITHLIFCSLVGV-DMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag-~~~-~~Id~vi~~s~t~~-~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
+..+|+.+|+++||+++| +++ +|||.+++++...+ ........+++.||+...+ .+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~--~~~v---~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAMRP--TMTV---AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCCCC--eEEE---eCcHHHHHHHHHHH
Confidence 378999999999999999 997 79999987542111 1111224577889985443 3433 88999999999999
Q ss_pred HHcCCCCeEEEEEeecccc--c------------cC-------------------------------------------C
Q 016111 178 AENNPGARVLVVCSDLSLG--T------------FR-------------------------------------------G 200 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~--~------------~~-------------------------------------------~ 200 (395)
|++|.+++|||++.++.+. . |. +
T Consensus 99 V~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~N 178 (385)
T PRK06066 99 INSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAVKFMSRKGITREDLALVVEKNKKAGLSN 178 (385)
T ss_pred HHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999986432 0 00 0
Q ss_pred CCC-----C------------CchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecC
Q 016111 201 PSD-----A------------NLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREM 262 (395)
Q Consensus 201 ~~~-----~------------~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 262 (395)
|.- . ++-........+|||+|+||.+++.. ..+.. ...+...+....... .. ..
T Consensus 179 P~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~-pv~I~g~g~~~~~~~---~~----~~ 250 (385)
T PRK06066 179 PRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDD-PVWIKGIGWSTESSN---LE----TA 250 (385)
T ss_pred ChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCC-CEEEEEEEEecCCcc---cc----cc
Confidence 100 0 00012334567899999999876431 11011 234544332110000 00 00
Q ss_pred ceEEEeCchhHHHHHHHHHHHHHHhhccCCCC--CCCce-EEEEcCCChHHHHHHHHHcCCCc--cc-------------
Q 016111 263 GLTVHLSKNVATVVSENIEKCLDEAFSPFGIK--DWNSL-FWIVQPGGPAIVNQIEAKLGLKQ--QK------------- 324 (395)
Q Consensus 263 g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~--~~~di-~~i~hq~~~~~~~~i~~~lgi~~--e~------------- 324 (395)
.+. .......+.+++++++|++ + +|| .+-+|-......-...+.||+.+ +.
T Consensus 251 --------~~~--~~~~~~~Aa~~a~~~AGi~~p~-~DiD~~ei~D~Ft~~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~G 319 (385)
T PRK06066 251 --------ELG--KANYMRIAADMAYKMAGIESPR-KEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQG 319 (385)
T ss_pred --------ccc--ccHHHHHHHHHHHHHcCCCCCH-HHCcEEEEecCChHHHHHHHHHcCCCCCCchHHHHHCCCCCCCC
Confidence 000 0111235788999999998 5 888 78888877666667788899865 22
Q ss_pred -hhHH-HHHHHhcCCCccchHHHHHHHHHHh
Q 016111 325 -LSAT-RHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 325 -~~~~-~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
++.| .-=+-.+||...++-+..+.++.++
T Consensus 320 ~~PvN~~GG~la~Ghp~gatG~~~v~e~~~Q 350 (385)
T PRK06066 320 ELPVNPSGGHLAKGVPLEASGLSLLLDAVEY 350 (385)
T ss_pred CccccCCCchhcCCCccchhHHHHHHHHHHH
Confidence 1111 0012347999988888888887664
No 116
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.9e-09 Score=106.62 Aligned_cols=227 Identities=15% Similarity=0.120 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.++..+..+.. ....+++.||+...+ ...+..+|+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~---~~~~~~~~lGl~~~~--~~~v~~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDAPGL---GPASMVDYLGLKLRH--VDSTETGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCCCc---cHHHHHHhCCCCCee--eccccCCcHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999997652221111 124599999997653 6778899999999999999999999
Q ss_pred CCCeEEEEEeeccccc------------------cC------------------------------------------CC
Q 016111 182 PGARVLVVCSDLSLGT------------------FR------------------------------------------GP 201 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~------------------~~------------------------------------------~~ 201 (395)
.++.|||++.|+.+.. +. +|
T Consensus 100 ~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP 179 (388)
T PRK08142 100 KCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNP 179 (388)
T ss_pred CCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCC
Confidence 9999999999874310 00 01
Q ss_pred CC-----CCch------------hhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCc
Q 016111 202 SD-----ANLG------------CLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMG 263 (395)
Q Consensus 202 ~~-----~~~~------------~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 263 (395)
.- .+.+ .+......+|||+|+||.+++.. .. ..+...+...+....+.. .. .
T Consensus 180 ~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l-~~~~v~I~g~~~~~~~~~-----~~-~--- 249 (388)
T PRK08142 180 HAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSL-KRPLVKVLGAGEAIKGQM-----GG-K--- 249 (388)
T ss_pred hhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhc-CCCCEEEEEEEEecCCcc-----cc-C---
Confidence 00 0000 11123456899999999976431 11 012344544432211100 00 0
Q ss_pred eEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc-----------------ch
Q 016111 264 LTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ-----------------KL 325 (395)
Q Consensus 264 ~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e-----------------~~ 325 (395)
+++. ......+++++++++|+++ +|| .+=+|-.-........|.||+-+. ++
T Consensus 250 ------~~~~---~~~~~~aa~~a~~~AGi~~-~did~~elyD~Fs~~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~G~l 319 (388)
T PRK08142 250 ------VDLT---YSGAAWSGPAAFAEAGVTP-ADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFVADGNLISGVGKL 319 (388)
T ss_pred ------cccc---cHHHHHHHHHHHHHcCCCH-HHCCEEEEeccchHHHHHHHHHcCCCCCCchHHHHHCCCcccCCCCc
Confidence 0000 1112357889999999997 999 778888766666666788988432 12
Q ss_pred hHHH-HHHHhcCCCccchHHHHHHHHHHh
Q 016111 326 SATR-HVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 326 ~~~~-~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+.|. -=+...||...++-+..+.++.++
T Consensus 320 PvN~sGG~l~~G~p~gatG~~~~~E~~~Q 348 (388)
T PRK08142 320 PFNTDGGGLCNNHPANRGGMTKVIEAVRQ 348 (388)
T ss_pred cccCCChhhcCCCcCcccHHHHHHHHHHH
Confidence 2210 012346898888888888887665
No 117
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=1.8e-10 Score=115.37 Aligned_cols=95 Identities=14% Similarity=0.080 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.||+++.++ ...+..+..++..+|++... ++++++.+|++++.++..|.++|+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~-p~~~v~~~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKV-PAWTVQRNCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCc-eeeeccchhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999988775 33456778899999997432 278999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.+++||++++|++|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998764
No 118
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.12 E-value=2.5e-10 Score=113.20 Aligned_cols=94 Identities=13% Similarity=0.105 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHH-HHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADY-QLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~-~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
.+.+|+.+|++++|+++|++|++||.||+++.++ +..+..+. .+++.+|+.+.+ +++++.+|++++.|+.+|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~~p--~~~V~~~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQEAP--AIGMNNLCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCCCc--EEEecchhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999998877 43455555 378888987764 8999999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
++|.++.+||+++|++|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999864
No 119
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.12 E-value=3.5e-09 Score=124.19 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=142.2
Q ss_pred HHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----------cc-----CCCCC
Q 016111 140 ADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----------TF-----RGPSD 203 (395)
Q Consensus 140 ~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----------~~-----~~~~~ 203 (395)
.+.+|+..||+... .+.+..+|+|++.||++|.+.|++|.++.+|+.+++.... .+ ..|.|
T Consensus 185 ~A~RIS~~f~L~Gp---s~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGGM---NCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCCC---cccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 47899999999986 6889999999999999999999999999999999886321 01 01222
Q ss_pred CCchhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHH
Q 016111 204 ANLGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEK 282 (395)
Q Consensus 204 ~~~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~ 282 (395)
....++++|+|++++||.+-... .-+.+....+.+.+.. +++... .++. +. .....+
T Consensus 262 ----~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~----~DG~~~--------~ita-P~-----~~gq~~ 319 (2582)
T TIGR02813 262 ----IDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGAS----SDGKFK--------SIYA-PR-----PEGQAK 319 (2582)
T ss_pred ----CCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEc----CCCCCC--------CCcC-CC-----HHHHHH
Confidence 22358999999999999975432 1001122334433311 101000 0000 11 122357
Q ss_pred HHHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCc---cchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 283 CLDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQ---QKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 283 ~i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~---e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
+|+++|+++|+++ ++| |+-.|-.+... .+.+.+.++-.. ..++.+ .+-..+||+.+|+-...|-..+-.
T Consensus 320 ~i~~Al~~Agi~p-~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vg-SvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 320 ALKRAYDDAGFAP-HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALG-SVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHcCCCH-HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceee-ccccccccchHhHHHHHHHHHHHH
Confidence 8999999999998 999 88899765433 556677776432 122222 134689999999988888664321
Q ss_pred hhhcCCccC-------------------------------CCCCceEEEEEEccchhhhheeeeec
Q 016111 354 SAEEGKVTT-------------------------------GEGLEWGVMFGIGAGVTVDTVVLRSF 388 (395)
Q Consensus 354 ~~~~g~i~~-------------------------------G~~~d~vll~~~G~G~s~~a~ll~~~ 388 (395)
.+++.+-+ .....++++-+||.|.+-..++|+-.
T Consensus 398 -l~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~ 462 (2582)
T TIGR02813 398 -LHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEY 462 (2582)
T ss_pred -HhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeec
Confidence 01122111 00124678889999999999999864
No 120
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.10 E-value=2e-09 Score=106.26 Aligned_cols=264 Identities=17% Similarity=0.164 Sum_probs=161.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCC-CCCcC---EEEEEecCC-----------------------CC----CC-CHHH
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQS-KSQIT---HLIFCSLVG-----------------------VD----MP-GADY 142 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~-~~~Id---~vi~~s~t~-----------------------~~----~p-~~a~ 142 (395)
.+.+......|+..|+++||+++|++ ..+++ .++++|..+ +. +| ..+.
T Consensus 64 ~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 143 (412)
T COG0304 64 ERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAG 143 (412)
T ss_pred HhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHH
Confidence 33366678899999999999999997 33442 334444421 01 12 3567
Q ss_pred HHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-cc--------------cc------cCCC
Q 016111 143 QLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SL--------------GT------FRGP 201 (395)
Q Consensus 143 ~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s--------------~~------~~~~ 201 (395)
.++..+|+... .+.+..+|+++..|+..|.++|+.|..+.+++.++|. .+ .. ...|
T Consensus 144 ~vs~~~g~~G~---~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrP 220 (412)
T COG0304 144 NVAIVFGLKGP---NYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRP 220 (412)
T ss_pred HHHHHhCCCCC---cCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCC
Confidence 89999999976 5778999999999999999999999999999999977 22 21 1223
Q ss_pred CCCCchhhhhhhhhccccEEEEEecCCCCC-CCCCCceEEEeeeeeecCCCcCccceE-EecCceEEEeCchhHHHHHHH
Q 016111 202 SDANLGCLAGQALFGDGAAALIIGANPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQ-FREMGLTVHLSKNVATVVSEN 279 (395)
Q Consensus 202 ~~~~~~~~~~~~~fGDgAaA~vl~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~g~~~~~~~~v~~~~~~~ 279 (395)
.+.++ .++++|+||+++||+..+... .+-+..-++...+... +..+.. ..++| +.
T Consensus 221 fd~~R----dGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~-----Da~h~t~P~p~g--------------~G 277 (412)
T COG0304 221 FDKNR----DGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTS-----DAYHITAPAPDG--------------EG 277 (412)
T ss_pred CCCCC----CCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecc-----cccccCCCCCCC--------------ch
Confidence 33322 489999999999999865321 0011234444433210 110000 00111 12
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCCChHHH-----HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIV-----NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~-----~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..++|+.+|+++|+++ +|| |+-.|-.+.+.. +.+.+.+|--..+++.+ .+-..+||+-.|.-.+-+.-.+..
T Consensus 278 a~~am~~AL~~Agl~~-~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vs-stKs~tGH~lGAaGaveai~~~l~ 355 (412)
T COG0304 278 AIRAMRAALADAGLTP-EDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVS-STKSLTGHTLGAAGAVEAIISLLA 355 (412)
T ss_pred HHHHHHHHHHHcCCCH-hHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceee-ecccccccChhhHHHHHHHHHHHH
Confidence 3368899999999998 999 999997665443 33445566322222221 135667888776654443322211
Q ss_pred hhhcCCccC------CC----------------CCceEEEEEEccchhhhheeeee
Q 016111 354 SAEEGKVTT------GE----------------GLEWGVMFGIGAGVTVDTVVLRS 387 (395)
Q Consensus 354 ~~~~g~i~~------G~----------------~~d~vll~~~G~G~s~~a~ll~~ 387 (395)
.++|.+.| .+ ..+.+|.-+||-|.+-++++++.
T Consensus 356 -l~~g~ippt~n~~~~dp~~~~l~~v~~~~~~~~~~~~lsnsfGFGG~Na~lv~~~ 410 (412)
T COG0304 356 -LRDGIIPPTINLDNPDPEAADLDVVPNEARTGAVRAALSNSFGFGGTNASLVFKR 410 (412)
T ss_pred -HhcCCcCCCCCcCCCCcccccccccCCcccccceeEEEecccccCCcceEEEEec
Confidence 00011111 00 01456777888888888777764
No 121
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.07 E-value=5.6e-10 Score=104.80 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
++.+|+.+|++.+|+++++++++||.|++++..+ ...+..+..+.-..|++... +.+.++..|+|++.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~v-p~~~V~~~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESV-PATTVNRACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTS-EEEEEE-GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhccccccc-ceeeehhhhhHHHHHHHHhhhhhc
Confidence 4889999999999999999999999999999988 44666788888889998765 488999999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+|++++|++|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999996
No 122
>PRK07855 lipid-transfer protein; Provisional
Probab=99.04 E-value=1.5e-08 Score=100.30 Aligned_cols=85 Identities=15% Similarity=0.144 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..+|+.+|+++||+++|++++|||.+++.+. ...+. ..+++.||+.+.. +...+..+|+++..+|..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~--~~~~~--~~l~~~lGl~~~~-~~~~v~~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM--DTNPE--IAVARALGIGELK-FFSRIHYGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC--ccccH--HHHHHHCCCCCCc-ceeeecCCcHHHHHHHHHHHHHHHCC
Confidence 7899999999999999999999999986432 12222 5688999997622 25678899999999999999999999
Q ss_pred CCCeEEEEEe
Q 016111 182 PGARVLVVCS 191 (395)
Q Consensus 182 ~~~~vLvv~~ 191 (395)
.++.|||++.
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 123
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.86 E-value=9.1e-09 Score=95.17 Aligned_cols=93 Identities=18% Similarity=0.124 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+.+|+.-|++.+|++++++++|++-||++...+ ......+.+.+---||+..+ ++..+|..|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv-~~tTvNkvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV-PATTVNKVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce-eeEeehhhhhhhHHHHHHHHHHHhc
Confidence 789999999999999999999999999998877 55556778888778899876 4899999999999999999999999
Q ss_pred CCCCeEEEEEeeccc
Q 016111 181 NPGARVLVVCSDLSL 195 (395)
Q Consensus 181 g~~~~vLvv~~d~~s 195 (395)
|..+.|+..+.|.+|
T Consensus 109 G~~divVaGGmEsMS 123 (396)
T KOG1390|consen 109 GHADIVVAGGMESMS 123 (396)
T ss_pred CCccEEEecccchhc
Confidence 999999999999987
No 124
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.80 E-value=2.7e-08 Score=99.80 Aligned_cols=94 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCC--cCEEEEEecCC-C--CCCCHHHHHHHHcCCC-------CccccceecCccchhHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQ--ITHLIFCSLVG-V--DMPGADYQLTKMLGLN-------PSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~--Id~vi~~s~t~-~--~~p~~a~~l~~~Lgl~-------~~~~~~~~i~~~C~~~~ 168 (395)
+..+|+.+|++++|+++|++++| ||.|++++..+ . ..+..+..+...+|++ ..+ ++.++.+|++++
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p--~~~V~~~caSG~ 124 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKP--AMRVEGACASGG 124 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCc--eeEEECcCHHHH
Confidence 37899999999999999999999 99999987654 2 2345566777565554 443 788999999999
Q ss_pred HHHHHHHHHHHcCCCCeEEEEEeecccc
Q 016111 169 TAIRMAKDFAENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 169 ~aL~~A~~ll~~g~~~~vLvv~~d~~s~ 196 (395)
.|+..|.++|++|.++.||++++|++|.
T Consensus 125 ~Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 125 LAVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 9999999999999999999999998764
No 125
>PRK07937 lipid-transfer protein; Provisional
Probab=98.76 E-value=6.6e-07 Score=87.36 Aligned_cols=238 Identities=16% Similarity=0.012 Sum_probs=138.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCC-CCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-PGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~-p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
.+|+.+|+++||+++|++++|||.++.++...+.. ......+...+|+.... +...+. +++..++..|...|++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~~~v~---~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPI-NESHVE---MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCC-ceEEec---CcHHHHHHHHHHHHhcC
Confidence 79999999999999999999999886433211211 11223455677874321 133333 46888999999999999
Q ss_pred CCCeEEEEEeeccccc-------------cCCCCC---------------------------------------------
Q 016111 182 PGARVLVVCSDLSLGT-------------FRGPSD--------------------------------------------- 203 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~~-------------~~~~~~--------------------------------------------- 203 (395)
.++.|||++.|+.+.. +..|..
T Consensus 101 ~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r 180 (352)
T PRK07937 101 EVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS 180 (352)
T ss_pred CCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc
Confidence 9999999999975310 000100
Q ss_pred CC------------chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCc
Q 016111 204 AN------------LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSK 270 (395)
Q Consensus 204 ~~------------~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 270 (395)
.+ +-.+......+|||+|+||.+.+.. ..+. ....+.+.+....+.. ... +
T Consensus 181 it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~-~pv~I~g~~~~~~~~~-------~~~--------~ 244 (352)
T PRK07937 181 ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRE-RPAWITGIEHRIESPS-------LGA--------R 244 (352)
T ss_pred CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCC-CcEEEEEEEEeeCCcc-------ccc--------c
Confidence 00 0011123345899999999875431 1101 1244444332211110 000 0
Q ss_pred hhHHHHHHHHHHHHHHhhcc-CCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHH
Q 016111 271 NVATVVSENIEKCLDEAFSP-FGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 271 ~v~~~~~~~~~~~i~~~L~~-~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
++.. . ..++.++++ +|+++ +|| .+=+|-......-...+.||+.. .++-.+=..+ . ||-..++-...+
T Consensus 245 d~~~--~----~~~~~a~~~aAgi~~-~diD~~Ei~D~F~~~~l~~~e~lGl~g~~pvN~~GG~l-~-ghp~gatG~~~~ 315 (352)
T PRK07937 245 DLTR--S----PSTALAAEAATGGDA-GGVDVAELHAPFTHQELILREALGLGDKTKVNPSGGAL-A-ANPMFAAGLERI 315 (352)
T ss_pred cccc--H----HHHHHHHHHhcCCCH-HHCCEEEEeCCChHHHHHHHHHcCCCCCCCcCCCccch-h-cCchhHHHHHHH
Confidence 0100 1 112233333 69997 999 78888877777777789999843 2333321124 3 888777778888
Q ss_pred HHHHHhhhhcCCccCCCCCceEEEEEEcc
Q 016111 348 DEIRRKSAEEGKVTTGEGLEWGVMFGIGA 376 (395)
Q Consensus 348 ~~~~~~~~~~g~i~~G~~~d~vll~~~G~ 376 (395)
.++..+ ++.+ +.++.|..+.|.
T Consensus 316 ~e~~~Q------L~g~-~a~~~l~~~~Gg 337 (352)
T PRK07937 316 GEAARH------IWDG-SARRALAHATSG 337 (352)
T ss_pred HHHHHH------Hhcc-CCCEEEEecccc
Confidence 887765 2211 126677777664
No 126
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.75 E-value=7.3e-08 Score=89.82 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=86.1
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCc-----CEEEEEecCC-C-----------------------CCC-CHHHHHHHHcC
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQI-----THLIFCSLVG-V-----------------------DMP-GADYQLTKMLG 149 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~I-----d~vi~~s~t~-~-----------------------~~p-~~a~~l~~~Lg 149 (395)
.....|+..|+.+||+++|+++.++ -.|+++++.+ + ..| ..+.+|+..+|
T Consensus 85 ~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g 164 (254)
T PF00109_consen 85 DRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFG 164 (254)
T ss_dssp -HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHT
T ss_pred hhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcC
Confidence 3567899999999999999988532 2355555543 1 022 25779999999
Q ss_pred CCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeec-ccc---------ccCCCCCC-C-chhhhhhhhhcc
Q 016111 150 LNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDL-SLG---------TFRGPSDA-N-LGCLAGQALFGD 217 (395)
Q Consensus 150 l~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~-~s~---------~~~~~~~~-~-~~~~~~~~~fGD 217 (395)
++.. .+.+..+|++++.||..|..+|++|..+.+||.++|. .+. ........ . .+....++++|+
T Consensus 165 l~G~---~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~~G~v~gE 241 (254)
T PF00109_consen 165 LRGP---SYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFADGFVLGE 241 (254)
T ss_dssp B-SS---EEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB-SB-BB-
T ss_pred CCCc---cccccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCCCCEEEEC
Confidence 9986 5789999999999999999999999999999999994 331 01111100 0 011125899999
Q ss_pred ccEEEEEecC
Q 016111 218 GAAALIIGAN 227 (395)
Q Consensus 218 gAaA~vl~~~ 227 (395)
||+++||++.
T Consensus 242 Ga~~~vLe~~ 251 (254)
T PF00109_consen 242 GAGALVLERL 251 (254)
T ss_dssp EEEEEEEEEH
T ss_pred ceEEEEEEEh
Confidence 9999999864
No 127
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.65 E-value=1.4e-07 Score=94.61 Aligned_cols=95 Identities=9% Similarity=0.017 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
+..+|+.+|++++|+++|+++++||.|++++..+ ...+..+..+.-..|++... +++.++++|++++.++..|..+|+
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~-p~~~V~~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT-PAYDLQQACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC-ceeeeechhhHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999997654 11233556655555665433 378899999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|..+.+|+++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999999874
No 128
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.64 E-value=9.9e-08 Score=89.76 Aligned_cols=211 Identities=16% Similarity=0.171 Sum_probs=134.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCC---CcC----EEEEEec----------------------CCCCCC-----CHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKS---QIT----HLIFCSL----------------------VGVDMP-----GADYQLTK 146 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~---~Id----~vi~~s~----------------------t~~~~p-----~~a~~l~~ 146 (395)
....|+..|+++||+++++.+. +.| .|.+++. +||++| -.+.+|..
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4578999999999999998765 223 5565665 344455 24689999
Q ss_pred HcCCCCccccceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc---------------------cCCCCCCC
Q 016111 147 MLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT---------------------FRGPSDAN 205 (395)
Q Consensus 147 ~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~---------------------~~~~~~~~ 205 (395)
++|+... ...++.+|+.+..++--|.++|+.|..+..|.-++|.+-.. ...|.|..
T Consensus 173 ~~gl~Gp---nhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLRGP---NHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCcCC---chhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 9999875 47789999999999999999999999998888888875310 11233332
Q ss_pred chhhhhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccce-EEecCceEEEeCchhHHHHHHHHHHH
Q 016111 206 LGCLAGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAG-QFREMGLTVHLSKNVATVVSENIEKC 283 (395)
Q Consensus 206 ~~~~~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~~~~~v~~~~~~~~~~~ 283 (395)
+ .++++|+|++.+||+.-+.. ..+.....++...+- +.+..+. ...++| .....+
T Consensus 250 R----dGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygl-----s~Da~HiT~P~~dG--------------~Ga~~a 306 (440)
T KOG1394|consen 250 R----DGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGL-----SSDAYHITSPDPDG--------------AGAVLA 306 (440)
T ss_pred C----CceeeccceeEEehHhHHHHHHcCCceeHHhhcCcc-----cccccccCCCCCCc--------------chHHHH
Confidence 2 48999999999999864431 000011223332221 0011100 011222 123357
Q ss_pred HHHhhccCCCCCCCce-EEEEcCCChHH-----HHHHHHHcCCCccc--hhHHHHHHHhcCCCccc
Q 016111 284 LDEAFSPFGIKDWNSL-FWIVQPGGPAI-----VNQIEAKLGLKQQK--LSATRHVLSEYGNMGGV 341 (395)
Q Consensus 284 i~~~L~~~gl~~~~di-~~i~hq~~~~~-----~~~i~~~lgi~~e~--~~~~~~~~~~~Gn~~sa 341 (395)
|+++|+++|+++ +|| |+--|..+... .+++.+.|+-.... +.. +-...||+-.|
T Consensus 307 m~raL~~Agl~p-e~i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsS---tKgaiGHLLGA 368 (440)
T KOG1394|consen 307 MERALKDAGLSP-EDIDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSS---TKGAIGHLLGA 368 (440)
T ss_pred HHHHHHHcCCCh-hhcCeeecccccCcCchHHHHHHHHHHhccCCccccccc---ccchhhhhccc
Confidence 889999999998 999 88888765433 44455555543332 322 35566776444
No 129
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.62 E-value=3e-06 Score=93.61 Aligned_cols=264 Identities=18% Similarity=0.208 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC-CCCC-------------------CHHHHHHHHcCCCCccccce
Q 016111 103 PKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG-VDMP-------------------GADYQLTKMLGLNPSVKRVM 158 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~-~~~p-------------------~~a~~l~~~Lgl~~~~~~~~ 158 (395)
--|..+.+.++|+++|+.++.+. .|+.+.+.. |... -.+.+|+..|++... .+
T Consensus 92 qRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GP---s~ 168 (1061)
T COG3321 92 QRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGP---SV 168 (1061)
T ss_pred HhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCC---Cc
Confidence 34888889999999999999888 566655554 4211 167899999999985 57
Q ss_pred ecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccc-----c-----CCCCC--CCchhhhhhhhhccccEEEEEec
Q 016111 159 LYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGT-----F-----RGPSD--ANLGCLAGQALFGDGAAALIIGA 226 (395)
Q Consensus 159 ~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~-----~-----~~~~~--~~~~~~~~~~~fGDgAaA~vl~~ 226 (395)
.+..+|++.+.|+++|.+.|++|.++.+|+-++...... | ..|+- ...+....+++.|+|++++||.+
T Consensus 169 ~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~vvLKr 248 (1061)
T COG3321 169 TVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGVVVLKR 248 (1061)
T ss_pred cccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEEEEEEE
Confidence 899999999999999999999999999999888764210 0 01110 00122245889999999999987
Q ss_pred CCCCC-CCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc
Q 016111 227 NPDTT-LSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ 304 (395)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h 304 (395)
-.... -++ ..+.+.... .... +|... |-..+. ...-.++++++|+++|+.+ .+| |+=.|
T Consensus 249 l~~A~~dgd-~IyavI~gs-avn~------------dG~~~--gltaP~--~~aQ~~v~~~al~~a~i~p-~tv~yvEaH 309 (1061)
T COG3321 249 LSDAERDGD-RIYAVIRGS-AVNQ------------DGRSN--GLTAPN--LEAQADVIREALADAGIDP-ATVQYVEAH 309 (1061)
T ss_pred hHHHHhCCC-eEEEEEEee-eecc------------CCCcC--CCCCCC--HHHHHHHHHHHHHhcCCCc-ccCcEEEec
Confidence 54321 001 123322111 1111 11000 001111 2344578999999999998 999 88888
Q ss_pred CCChH-----HHHHHHHHcCCCc-cchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC----------------
Q 016111 305 PGGPA-----IVNQIEAKLGLKQ-QKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT---------------- 362 (395)
Q Consensus 305 q~~~~-----~~~~i~~~lgi~~-e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~---------------- 362 (395)
..+.. -+..+.+.++-.. +....--.+-..+||+.+|.-...|-...-. .+++.+.+
T Consensus 310 gTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~La-l~~~~ip~~l~~~~~np~i~~~~s 388 (1061)
T COG3321 310 GTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALA-LKHGYIPPTLHFDTPNPEIDFDSS 388 (1061)
T ss_pred CCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHh-hhcCccCCcCCCCCCCcCCccccC
Confidence 75543 3555556655332 2211111245778999988887777664432 11233222
Q ss_pred -------------CCCCceEEEEEEccchhhhheeeeecC
Q 016111 363 -------------GEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 363 -------------G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
....-+.-+-+||.|.+-.-++++.-+
T Consensus 389 p~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~ 428 (1061)
T COG3321 389 PFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP 428 (1061)
T ss_pred CeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence 101245677888888888888887543
No 130
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.10 E-value=2.9e-05 Score=72.08 Aligned_cols=95 Identities=12% Similarity=0.067 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHH-cCCCCccccceecCccchhHHHHHHHHHHHHHc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKM-LGLNPSVKRVMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~-Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
+-+|...+.+..+++.+++|+.|.-|+++++..--.-...++++.. -|++..+ ++..++-.|++++.|+.....-|++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tv-pv~tvNRqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETV-PVRTVNRQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCccc-chhhhhhhhhhHHHHHHHHHHHHhc
Confidence 5578888999999999999999999999998641111445555554 4788776 4788999999999999999999999
Q ss_pred CCCCeEEEEEeeccccc
Q 016111 181 NPGARVLVVCSDLSLGT 197 (395)
Q Consensus 181 g~~~~vLvv~~d~~s~~ 197 (395)
|.++..|-.+.|.++..
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99999999999998753
No 131
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.96 E-value=2.9e-05 Score=77.05 Aligned_cols=94 Identities=16% Similarity=0.169 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHh--CCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEW--GQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~a--g~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
..++.....+..+++. ++++.+||.+++++..+ ......+..++..+|++... +.+.++.+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~-p~~~V~~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSV-PAVTVNRACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCC-CceEEeccchhHHHHHHHHHHH
Confidence 4455555555555433 57777889999987776 35667889999999999733 3899999999999999999999
Q ss_pred HHcCCCCeEEEEEeecccc
Q 016111 178 AENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 178 l~~g~~~~vLvv~~d~~s~ 196 (395)
|++|..+.||+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999986
No 132
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.68 E-value=5.1e-05 Score=68.97 Aligned_cols=91 Identities=20% Similarity=0.259 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
-.||+.+|..++|+++++.-++|+--+++=..+. .....+..-++|+..-+ .+.++++|+++..||-+|+++|++|
T Consensus 29 ypd~a~ea~tkal~da~ikys~vqqa~vgyvfgd--stcgqraiyevgmtgip--i~nvnnncatgssalflakqiiesg 104 (408)
T KOG1406|consen 29 YPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGD--STCGQRAIYEVGMTGIP--IYNVNNNCATGSSALFLAKQIIESG 104 (408)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHhhhheeeecC--CccchHHHHhccccCcc--eeeccCccccCchHHHHHHHHHhcC
Confidence 5789999999999999999888874333222111 11234555588999875 8999999999999999999999999
Q ss_pred CCCeEEEEEeecccc
Q 016111 182 PGARVLVVCSDLSLG 196 (395)
Q Consensus 182 ~~~~vLvv~~d~~s~ 196 (395)
..+.||..+-|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999863
No 133
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.10 E-value=0.00079 Score=61.18 Aligned_cols=95 Identities=16% Similarity=0.092 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
+..+|..-|++.+|+.+++.++.+|.||++.... ...--++..+.-+.|.+... +...++.=|.+++.++..+.+-|
T Consensus 27 ~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~-pALtiNRLCGSGFQsiVNgaQ~I 105 (396)
T KOG1391|consen 27 SATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET-PALTINRLCGSGFQSIVNGAQEI 105 (396)
T ss_pred chhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc-CceeehhhhcccHHHHHhhHHHh
Confidence 4789999999999999999999999999876542 11111234455555666665 48899999999999999999999
Q ss_pred HcCCCCeEEEEEeecccc
Q 016111 179 ENNPGARVLVVCSDLSLG 196 (395)
Q Consensus 179 ~~g~~~~vLvv~~d~~s~ 196 (395)
.-|..+.||.-+.|.+|.
T Consensus 106 ~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 106 CVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hcCcceEEEecCcccccc
Confidence 999999999999999883
No 134
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.91 E-value=0.0036 Score=59.03 Aligned_cols=54 Identities=22% Similarity=0.282 Sum_probs=39.6
Q ss_pred HHHhcCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeeeecC
Q 016111 331 VLSEYGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLRSFP 389 (395)
Q Consensus 331 ~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~~~~ 389 (395)
.-+++||++++|+++.|..++.... ...-.| ++|+|.++|+|......-+++.+
T Consensus 150 ~~~~vGN~YTaSly~~L~SlL~~~~--~~~l~G---krI~~FSYGSG~~s~~fs~~v~~ 203 (282)
T PF08540_consen 150 YSRQVGNMYTASLYLGLASLLSSAE--ADDLAG---KRIGMFSYGSGLASEFFSGRVQP 203 (282)
T ss_dssp HHHHHB--GGGHHHHHHHHHHHHHH--SCHHTT----EEEEEEEETTTEEEEEEEEE-T
T ss_pred HHHHcCceehHHHHHHHHHHhhccC--ccccCC---CEEEEEEecCCcceeEEEEEEeC
Confidence 4578999999999999999993211 334468 89999999999998877777665
No 135
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.81 E-value=0.0048 Score=66.76 Aligned_cols=260 Identities=19% Similarity=0.215 Sum_probs=154.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcC----EEEEEecCC---C---CCC---------CH-HHHHHHH----cCCCCccccc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQIT----HLIFCSLVG---V---DMP---------GA-DYQLTKM----LGLNPSVKRV 157 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id----~vi~~s~t~---~---~~p---------~~-a~~l~~~----Lgl~~~~~~~ 157 (395)
...|..++..+|+-++|+.|.++. .+....+.+ . ..| +. -...+.+ +.+... .
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP---S 163 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP---S 163 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC---c
Confidence 567889999999999999998765 333332221 1 112 11 1222333 334433 5
Q ss_pred eecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeecccc-----cc-----CCCCC--CCchhhhhhhhhccccEEEEEe
Q 016111 158 MLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLG-----TF-----RGPSD--ANLGCLAGQALFGDGAAALIIG 225 (395)
Q Consensus 158 ~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~-----~~-----~~~~~--~~~~~~~~~~~fGDgAaA~vl~ 225 (395)
+.+..+|++.+.||+.|.+-+++|.++.+||.++..... .| ..|.- ...+....+..=+||.+|++|.
T Consensus 164 ~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagnGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 164 FSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGNGYCRSEGVVAVLLQ 243 (2376)
T ss_pred hhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCCceeecCceEEEEEe
Confidence 677899999999999999999999999999998876432 11 11110 0112223456678999999998
Q ss_pred cCCCCCCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEc
Q 016111 226 ANPDTTLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQ 304 (395)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~h 304 (395)
+..... +....+.+..+ .+++ +.++|..|-.|+ .-.+.+++..+++|+.| +++ |+=.|
T Consensus 244 rk~~Ar---RvYAtilnart----NTDG-----fKEqGvTfP~G~--------~Q~qLi~e~Yse~Gl~P-~sv~YvEAH 302 (2376)
T KOG1202|consen 244 RKSLAR---RVYATILNART----NTDG-----FKEQGVTFPSGD--------MQEQLIRETYSEAGLNP-ESVVYVEAH 302 (2376)
T ss_pred hhHHHH---HHHHHhhcccc----CCCc-----hhhcCccCCCcH--------HHHHHHHHHHHhcCCCc-ccEEEEEec
Confidence 865421 01222222211 1111 222343222222 12367889999999998 999 77788
Q ss_pred CCChHH-----HHHHHHHcCCCcc-c-hhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCccC---------------
Q 016111 305 PGGPAI-----VNQIEAKLGLKQQ-K-LSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKVTT--------------- 362 (395)
Q Consensus 305 q~~~~~-----~~~i~~~lgi~~e-~-~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i~~--------------- 362 (395)
..+.++ ...+.+.+=-++. . +.-+ +-...||.-.||-.-+|+..+-. .++|-+.|
T Consensus 303 GtGTkVGDpQEaN~it~~fC~~Rt~pLLIGS--vKSNMGHaEPASGv~alaKills-mE~glip~NLHy~tPNp~ip~L~ 379 (2376)
T KOG1202|consen 303 GTGTKVGDPQEANGITRFFCATRTTPLLIGS--VKSNMGHAEPASGVCALAKILLS-MEEGLIPPNLHYNTPNPEIPALV 379 (2376)
T ss_pred cCCCCCCChHHhhhHHHHHhhcCCCceEeee--ccccCCCCCccchHHHHHHHHHH-HHhCcCCCccccCCCCCCcchhc
Confidence 755432 3334333221111 1 1112 34678888888888888876543 22243322
Q ss_pred --------------CCCCceEEEEEEccchhhhheeeeecCCC
Q 016111 363 --------------GEGLEWGVMFGIGAGVTVDTVVLRSFPFP 391 (395)
Q Consensus 363 --------------G~~~d~vll~~~G~G~s~~a~ll~~~~~~ 391 (395)
| ..|-+-+||-|.+-.-++|+-.+-|
T Consensus 380 dGrLkVVd~~lp~~G---GivGiNSFGFGGsN~HviLks~~~~ 419 (2376)
T KOG1202|consen 380 DGRLKVVDRPLPWRG---GIVGINSFGFGGSNAHVILKSNTKP 419 (2376)
T ss_pred cceeEEecCCCCccC---ceeeeeccccCCCceeEEeccCCCC
Confidence 3 4677888999988888999877544
No 136
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.75 E-value=0.0012 Score=60.95 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
.+.+|+.+|...+|++..++.+.||+||++|... --....+...+-.-|.++.. +...+.++|-+.-.|+.....+|.
T Consensus 65 mphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdkt-pahtvtmacissn~amttgmglia 143 (465)
T KOG1392|consen 65 MPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKT-PAHTVTMACISSNVAMTTGMGLIA 143 (465)
T ss_pred chhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCC-ccceeeeehhccchhhhccceeEe
Confidence 4789999999999999999999999999999765 22334555555566888765 488899999999999999999999
Q ss_pred cCCCCeEEEEEeecccc
Q 016111 180 NNPGARVLVVCSDLSLG 196 (395)
Q Consensus 180 ~g~~~~vLvv~~d~~s~ 196 (395)
+|.++.++.-+.|.+|.
T Consensus 144 tg~~dvivaggvelmsd 160 (465)
T KOG1392|consen 144 TGNADVIVAGGVELMSD 160 (465)
T ss_pred eCCcCEEEEcceeeccc
Confidence 99999888888898874
No 137
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.18 E-value=0.045 Score=49.67 Aligned_cols=114 Identities=20% Similarity=0.073 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCC----------------CCC---------CHHHHHHHHcCCCCcccc
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGV----------------DMP---------GADYQLTKMLGLNPSVKR 156 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~----------------~~p---------~~a~~l~~~Lgl~~~~~~ 156 (395)
...|++.++.+++++. +++|.+||+|..+. ..| ..+.++.-..|....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~~~--- 106 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNTGP--- 106 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCCCc---
Confidence 6778888888888653 57889999998651 122 234555666665543
Q ss_pred ceecCccchhHHHHHHHHHHHHHcCCCCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC
Q 016111 157 VMLYFQGCYIGATAIRMAKDFAENNPGARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 157 ~~~i~~~C~~~~~aL~~A~~ll~~g~~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
...+..+-.++..||.-|..++..| .+.||||+.|........... . ......--|.|++|++++.
T Consensus 107 ~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~---~---~~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFR---P---ERDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcc---c---ccCCCcCEEEEEEecCCCC
Confidence 5667888899999999999999999 899999999997653221110 0 0112244678888887655
No 138
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=95.72 E-value=0.021 Score=47.01 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=64.0
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhhcCCc
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAEEGKV 360 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~~g~i 360 (395)
.+++++|+++|++. +|+ .|=.|-+-....-...+.||++++++-.+ --.-.+||-.++|-...+.+++.+...
T Consensus 26 ~A~~~al~~ag~~~-~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~-GG~la~GHP~gasG~r~~~~l~~~L~~---- 99 (123)
T PF02803_consen 26 PAARKALERAGLTP-DDIDVIEINEAFAAQVLAFLEALGLDPEKVNPN-GGALALGHPLGASGARLVVELAHQLRR---- 99 (123)
T ss_dssp HHHHHHHHHHT--G-GGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT---HHHH-BHTTTHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHhCCCc-cccchhhccchhhhHHHHhhccccccccccCcc-cccccccccccccccchhhhhHHHHHH----
Confidence 57789999999997 999 88899988887788889999999987663 234458999888888777777665221
Q ss_pred cCCCCCceEEEEEEccchhhhheeee
Q 016111 361 TTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 361 ~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
+.| ++.+...-++|..-.+++++
T Consensus 100 ~~~---~~gla~~~~ggG~g~a~lle 122 (123)
T PF02803_consen 100 RGG---RYGLAAICAGGGQGSAVLLE 122 (123)
T ss_dssp HTT---SEEEEEEEETTTEEEEEEEE
T ss_pred hch---hhhhHHhcccceeeEEEEEE
Confidence 124 55555444444444556665
No 139
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=95.07 E-value=0.094 Score=52.80 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=64.5
Q ss_pred hhhhhhccccEEEEEecCCCC-CCCCCCceEEEeeeeeecCCCcCccceEEecCceEEEeCchhHHHHHHHHHHHHHHhh
Q 016111 210 AGQALFGDGAAALIIGANPDT-TLSEKPLFQIVSGAQTILPGSDSDVAGQFREMGLTVHLSKNVATVVSENIEKCLDEAF 288 (395)
Q Consensus 210 ~~~~~fGDgAaA~vl~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L 288 (395)
...+..+|||+|+||.+.+.. ..+..+..++.+...... ...... .....+++++|
T Consensus 261 ~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~--------------------~~~~~~---~~~~~a~~~al 317 (426)
T PRK08170 261 GNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAAL--------------------DPSQMG---LGPVHAATPLL 317 (426)
T ss_pred cccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeee--------------------Cchhhc---ccHHHHHHHHH
Confidence 346678999999999976431 110122334433221100 000110 11236788999
Q ss_pred ccCCCCCCCce-EEEEcCCChHH-HHHHH--HHcC--------------CCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 289 SPFGIKDWNSL-FWIVQPGGPAI-VNQIE--AKLG--------------LKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 289 ~~~gl~~~~di-~~i~hq~~~~~-~~~i~--~~lg--------------i~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+++|+++ +|| .+=+|-.-... +-.+. +.+| ++.+++-.+ --.-.+||...|+-...+.++
T Consensus 318 ~~aGl~~-~did~~ei~daFa~~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~-GG~la~GHP~GAtG~~~~~~l 395 (426)
T PRK08170 318 QRHGLTL-EDLDLWEINEAFAAQVLACLAAWADEEYCREQLGLDGALGELDRERLNVD-GGAIALGHPVGASGARIVLHL 395 (426)
T ss_pred HHcCCCH-HHcCEEEecchhHHHHHHHHHHhccccchhcccccccccCCCCcceecCC-CCHHHhCCCccCccHHHHHHH
Confidence 9999997 999 88788765432 21111 2222 344444332 123458999888885555555
Q ss_pred HHh
Q 016111 351 RRK 353 (395)
Q Consensus 351 ~~~ 353 (395)
.+.
T Consensus 396 ~~~ 398 (426)
T PRK08170 396 LHA 398 (426)
T ss_pred HHH
Confidence 543
No 140
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.89 E-value=0.052 Score=41.83 Aligned_cols=74 Identities=23% Similarity=0.177 Sum_probs=44.2
Q ss_pred HHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHHHcCCCCeEEEE
Q 016111 114 IKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFAENNPGARVLVV 189 (395)
Q Consensus 114 L~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll~~g~~~~vLvv 189 (395)
|+++|++++|||.++....+ ......+.+++|++..-. ...+ +.+|++...+|..+..-=+-.+.+++|++
T Consensus 1 L~~~g~~~~did~~i~hq~~----~~~~~~~~~~lgi~~~~~-~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQAS----KKILDSIAKRLGIPPERF-PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHHTT--GGGESEEEE-SSS----HHHHHHHHHHHTS-GGGB-E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred CccccCCHHHCCEEEeCCCC----HHHHHHHHHHcCCcHHHH-HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 68999999999999975533 234466889999986631 1222 45666666666554442122256788888
Q ss_pred Eee
Q 016111 190 CSD 192 (395)
Q Consensus 190 ~~d 192 (395)
+.-
T Consensus 76 ~~G 78 (90)
T PF08541_consen 76 GFG 78 (90)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 141
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=93.53 E-value=0.47 Score=47.96 Aligned_cols=71 Identities=18% Similarity=0.155 Sum_probs=53.0
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCcc------------------chhHHHHHHHhcCCCccc
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQ------------------KLSATRHVLSEYGNMGGV 341 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e------------------~~~~~~~~~~~~Gn~~sa 341 (395)
..+++++++++|+++ +|| .+=+|-.-....-...+.||+.+. ++-.+ -=+-.+||-..+
T Consensus 312 ~~A~~~a~~~AGl~~-~DiD~~Ei~daFa~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~GHP~gA 389 (438)
T PTZ00455 312 RAAAQKALSMAGVKP-SDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPVNTG-GGLLSFGHPVGA 389 (438)
T ss_pred HHHHHHHHHHcCCCH-HHCcEeeecccChHHHHHHHHHcCCCCCCchHHHHhcCCcccCCCceeeCC-CchhhcCCCcch
Confidence 467889999999997 999 888888876767777889998762 33221 124558999988
Q ss_pred hHHHHHHHHHHh
Q 016111 342 SVFFILDEIRRK 353 (395)
Q Consensus 342 s~~i~L~~~~~~ 353 (395)
+-...+.++..+
T Consensus 390 tG~~~v~e~~~Q 401 (438)
T PTZ00455 390 TGVKQIMEVYRQ 401 (438)
T ss_pred HHHHHHHHHHHH
Confidence 888877777664
No 142
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.99 E-value=0.52 Score=46.63 Aligned_cols=90 Identities=8% Similarity=0.018 Sum_probs=58.9
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHc-----CCCCcccc-ce-ec-CccchhHHH
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKML-----GLNPSVKR-VM-LY-FQGCYIGAT 169 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~L-----gl~~~~~~-~~-~i-~~~C~~~~~ 169 (395)
+.+.......++++++|+++|++++|||.++....+. ..-..+.++| |++.+-.+ .+ .+ |.+|++...
T Consensus 266 ~~~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq~n~----~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi 341 (378)
T PRK06816 266 LNENIVVYTIKPLLELVDKRNLDPDDIDYFLPHYSSE----YFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYI 341 (378)
T ss_pred HHHHhHHHHHHHHHHHHHHcCCChhhCCEEeeCcccH----HHHHHHHHHHHhccCCCChhheEEeccccccccchHHHH
Confidence 3344556668899999999999999999999644322 2345667766 78754210 11 12 567777777
Q ss_pred HHHHHHHHHHcC---CCCeEEEEEeecc
Q 016111 170 AIRMAKDFAENN---PGARVLVVCSDLS 194 (395)
Q Consensus 170 aL~~A~~ll~~g---~~~~vLvv~~d~~ 194 (395)
+|..+. ++| +.++|++++++..
T Consensus 342 ~L~~a~---~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 342 MLDELL---NSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHHHH---HcCCCCCCCEEEEEEeccc
Confidence 886553 333 4578888876654
No 143
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=92.29 E-value=0.37 Score=47.08 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e---ec-CccchhHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV-M---LY-FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~-~---~i-~~~C~~~~~aL~~A~~l 177 (395)
...+.++++++|+++|++++|||.+++..... ..-..+.++||++..-.+. + .+ |.++++...+|..+...
T Consensus 207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~----~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~ 282 (345)
T TIGR00748 207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNG----KFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDI 282 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCEEEeCCCCh----HHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHh
Confidence 44456889999999999999999999744322 2445689999998642111 1 22 56788888888766553
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
++ +.++||+++
T Consensus 283 ~~--~Gd~vll~~ 293 (345)
T TIGR00748 283 AE--PGDRILAVS 293 (345)
T ss_pred cC--CCCEEEEEE
Confidence 33 346777666
No 144
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=91.73 E-value=0.76 Score=46.31 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=54.2
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHH-HHHH--HHHcCC--------------CccchhHHHHHHHhcCCCccchH
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAI-VNQI--EAKLGL--------------KQQKLSATRHVLSEYGNMGGVSV 343 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~-~~~i--~~~lgi--------------~~e~~~~~~~~~~~~Gn~~sas~ 343 (395)
.+++++++++|+++ +|| .+=+|-.-... +-.+ .+.+|+ +..++-.+ --.-.+||...|+-
T Consensus 313 ~a~~~a~~~AGl~~-~Did~~Ei~d~Fa~~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~-GG~la~GhP~gATG 390 (427)
T PRK09268 313 YAVPRLLARNGLTL-QDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVN-GSSLAAGHPFAATG 390 (427)
T ss_pred HHHHHHHHHcCCCH-HHCCEEEeccccHHHHHHHHHHhhhccccccccccccccCcCCCcccCCC-cCHHhcCCCcccch
Confidence 47788999999997 999 77777764433 2222 133333 22222221 11234799988888
Q ss_pred HHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhheeee
Q 016111 344 FFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDTVVLR 386 (395)
Q Consensus 344 ~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a~ll~ 386 (395)
...+.++..+.. + +.| .+.|...-++|..-.+++|+
T Consensus 391 ~~~v~e~~~QL~--~--~~~---~~gl~~~c~~gG~g~a~~~e 426 (427)
T PRK09268 391 GRIVATLAKLLA--E--KGS---GRGLISICAAGGQGVTAILE 426 (427)
T ss_pred HHHHHHHHHHHH--h--cCC---CEEEEEEcccCchheEEEEe
Confidence 777777766521 1 123 45555444444444456654
No 145
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.07 E-value=0.75 Score=44.59 Aligned_cols=85 Identities=21% Similarity=0.226 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc-cee--cCccchhHHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR-VML--YFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~-~~~--i~~~C~~~~~aL~~A~~l 177 (395)
.......++.+++|+++|++++|||.+++.... +..-..+.++||++..-.+ .+. -|.++++...+|..+
T Consensus 236 ~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~----~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~--- 308 (338)
T PRK09258 236 EGVELAVDTWEAFLAQLGWAVEQVDRVICHQVG----AAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA--- 308 (338)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCC----HHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH---
Confidence 345566778999999999999999998865432 2344688999999864210 111 144555666666544
Q ss_pred HHcC---CCCeEEEEEee
Q 016111 178 AENN---PGARVLVVCSD 192 (395)
Q Consensus 178 l~~g---~~~~vLvv~~d 192 (395)
++.| +.+++|+++.-
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 3333 45778877744
No 146
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.04 E-value=0.67 Score=44.48 Aligned_cols=81 Identities=16% Similarity=0.072 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
..-..++++++|+++|++++|||.+++... .+..-..+++.||++..-. ...+ +.++++.+.+|..+ +
T Consensus 218 ~~~~~~~~~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lgi~~~k~-~~~~~~~Gn~~sas~~~~L~~~---~ 289 (318)
T TIGR00747 218 VRKMGDVVEETLEANGLDPEDIDWFVPHQA----NLRIIEALAKRLELDMSQV-VKTVHKYGNTSAASIPLALDEL---L 289 (318)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHe-eehHhhhCCHHHHHHHHHHHHH---H
Confidence 444667899999999999999999996332 2234578899999986421 1122 34555555555443 3
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
++| +.+++|+++.
T Consensus 290 ~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 290 RTGRIKPGDLLLLVAF 305 (318)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 333 3577887774
No 147
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=90.92 E-value=0.27 Score=40.06 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=45.9
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHH-----HHHHcCCCc--cchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQ-----IEAKLGLKQ--QKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~-----i~~~lgi~~--e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
.+.++|+++|+++|+++ +|| ++..|-.+....+. +.+.++-.. ..++.+ .+-..+||+.+++-++.|...
T Consensus 26 ~~~~~i~~al~~agi~~-~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~-s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 26 ALARAIRRALADAGISP-EDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVG-SVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHTS-G-GGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE--THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccc-ccceeeeeeccccccchhhhhhhhhhhhccccccccccee-ccccccccccccchHHHHHHH
Confidence 45678999999999997 999 88999877765443 445555332 122322 146789999999999999877
Q ss_pred HHh
Q 016111 351 RRK 353 (395)
Q Consensus 351 ~~~ 353 (395)
+-.
T Consensus 104 ~l~ 106 (119)
T PF02801_consen 104 LLA 106 (119)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 148
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=90.90 E-value=0.72 Score=44.50 Aligned_cols=81 Identities=9% Similarity=0.096 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-c----CccchhHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML-Y----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~-i----~~~C~~~~~aL~~A~~ 176 (395)
..+...++++++|+++|++++|||.+++... .+..-..+.++||++..- ... + +.++++...+|..+
T Consensus 225 ~~~~~~~~~~~~L~~~gl~~~did~~~~h~~----~~~~~~~~~~~l~l~~~k--~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 225 AVRMMSGASQNVLASAAMTPQDIDRFFPHQA----NARIVDKVCETIGIPRAK--AASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHH--hhhhHHhhCcHHHHHHHHHHHHH--
Confidence 4456678899999999999999999887332 233456789999998653 221 1 34555555555433
Q ss_pred HHHcC---CCCeEEEEEe
Q 016111 177 FAENN---PGARVLVVCS 191 (395)
Q Consensus 177 ll~~g---~~~~vLvv~~ 191 (395)
+..+ +.+++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 3333 3578888774
No 149
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.89 E-value=1.1 Score=43.32 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHH
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKD 176 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ 176 (395)
.......++.+++|+++|++++|||.+++..... ..-..++++||++.... ...+ +.+|++...+|..
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~----~~~~~i~~~l~l~~e~~-~~~~~~~Gn~~sas~~~~L~~--- 298 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASG----PAMRLIRKKLGVDEERF-VTIFEDHGNMIAASIPVALFE--- 298 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCH----HHHHHHHHHcCCCHHHh-hhhHhhhCcHHHHHHHHHHHH---
Confidence 4455677889999999999999999988644322 23468899999986521 1111 3344445555543
Q ss_pred HHHcC---CCCeEEEEE
Q 016111 177 FAENN---PGARVLVVC 190 (395)
Q Consensus 177 ll~~g---~~~~vLvv~ 190 (395)
++++| +.+++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 34444 357777776
No 150
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.83 E-value=1 Score=44.46 Aligned_cols=86 Identities=14% Similarity=0.125 Sum_probs=53.9
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHH-cCCCCcccc---ce-ec-CccchhHHHHHHH
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKM-LGLNPSVKR---VM-LY-FQGCYIGATAIRM 173 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~-Lgl~~~~~~---~~-~i-~~~C~~~~~aL~~ 173 (395)
+...+...++++++|+++|++++|||.+++...... .-..+.++ ||+...... .+ .+ |.+|++...+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~----~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANIN----MNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH----HHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 345566778999999999999999999986443221 22234555 565321101 11 12 5678888888877
Q ss_pred HHHHHHcCCCCeEEEEEe
Q 016111 174 AKDFAENNPGARVLVVCS 191 (395)
Q Consensus 174 A~~ll~~g~~~~vLvv~~ 191 (395)
+..-++ +.+++|+++.
T Consensus 343 ~~~~~~--~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDLA--AGDLGVICSF 358 (372)
T ss_pred HhccCC--CCCEEEEEEe
Confidence 754333 4577777763
No 151
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=89.69 E-value=1.4 Score=42.64 Aligned_cols=80 Identities=14% Similarity=0.061 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll~ 179 (395)
....++++++|+++|++++|||.+++.... +.....+.++||++..-. ...+ |.+|++...+|..+ ++
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~~----~~~~~~~~~~lgl~~~k~-~~~l~~~Gn~~sasi~~~L~~~---~~ 297 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQAN----KRILEAIANRLSVPNSKM-ITNLEKYGNTSAASIPLALDEA---IQ 297 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhHHHhhCcHHHHHHHHHHHHH---HH
Confidence 446677899999999999999998875432 234467899999985521 1222 34555666666544 34
Q ss_pred cC---CCCeEEEEEe
Q 016111 180 NN---PGARVLVVCS 191 (395)
Q Consensus 180 ~g---~~~~vLvv~~ 191 (395)
.| +.+++|+++.
T Consensus 298 ~g~~~~Gd~vll~~~ 312 (326)
T CHL00203 298 NNKIQPGQIIVLSGF 312 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 43 4567777763
No 152
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.40 E-value=1.6 Score=41.86 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++++++|+++|++++|||.+++.... +.....++++||++.... ...+ +.+|++...+|. .++
T Consensus 224 ~~~~~~~i~~~L~~~g~~~~did~~~~h~~~----~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 224 VRTMPKGARQVLEKAGLTKDDIDWVIPHQAN----LRIIESLCEKLGIPMEKT-LVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHh-hhhHhhhCchHHHHHHHHHH---HHH
Confidence 3445678899999999999999999975432 334568899999986421 1111 334555555654 334
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
+.| +.+++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 544 3567777764
No 153
>PRK06840 hypothetical protein; Validated
Probab=89.15 E-value=1.5 Score=42.62 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccccee-c-CccchhHHHHHHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVML-Y-FQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~-i-~~~C~~~~~aL~~A~~ll~~g 181 (395)
....++++++|+++|++++|||.++..... +..-..++++||++..-..... + +.++++.+.+|..+ ++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~~~----~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILHMK----RSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCcC----HHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 455689999999999999999998864432 2334678999999864211111 1 34555555555433 4443
Q ss_pred ---CCCeEEEEEe
Q 016111 182 ---PGARVLVVCS 191 (395)
Q Consensus 182 ---~~~~vLvv~~ 191 (395)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4577777774
No 154
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=89.09 E-value=1 Score=45.14 Aligned_cols=74 Identities=16% Similarity=0.079 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec--------CccchhHHHHHHHHHHHH
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY--------FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i--------~~~C~~~~~aL~~A~~ll 178 (395)
..|++++|+++|++++|||.+.+... +........+.||++... .... -.|++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~ea----Fa~~~l~~~~~lg~~~~~--vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINEA----FAVVAEKFIRDLDLDRDK--VNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEchH----HHHHHHHHHHHcCCChhh--ccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 47999999999999999999885432 223345667788876542 2111 237778888888888887
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
+.| .++.|
T Consensus 392 ~~g-~~~Gl 399 (417)
T PRK06025 392 RRG-LKRGL 399 (417)
T ss_pred HhC-CCeEE
Confidence 766 45553
No 155
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=88.60 E-value=1.2 Score=44.02 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++++++|+++|++++|||.++..... +..-..++++||++..-. ...+ |.++++...+|..+ +
T Consensus 279 ~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~-~~~l~~~GNt~sAsi~~~L~~~---~ 350 (379)
T PLN02326 279 VRCVPQVIESALQKAGLTAESIDWLLLHQAN----QRIIDAVAQRLGIPPEKV-ISNLANYGNTSAASIPLALDEA---V 350 (379)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHcCCCHHHe-eecHhhcCcHHHHHHHHHHHHH---H
Confidence 4456678899999999999999998864432 223456899999986421 1122 34556666666544 3
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
+.| +.+++|+++.
T Consensus 351 ~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 351 RSGKVKKGDVIATAGF 366 (379)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 4567777763
No 156
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=88.23 E-value=1.9 Score=41.17 Aligned_cols=82 Identities=20% Similarity=0.123 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~l 177 (395)
..+...++++++|+++|++++|||.+++.... +..-..+.++||++..-. ...+ +.++++.+.+|..+
T Consensus 221 ~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~----~~~~~~~~~~lgl~~~~~-~~~~~~~Gn~~sas~~~~L~~~--- 292 (320)
T cd00830 221 AVRLMPESIEEALEKAGLTPDDIDWFVPHQAN----LRIIEAVAKRLGLPEEKV-VVNLDRYGNTSAASIPLALDEA--- 292 (320)
T ss_pred HHHhhHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHh-hhhHHhhCcHHHHHHHHHHHHH---
Confidence 44667788999999999999999998875432 234467899999975521 1122 33444444555433
Q ss_pred HHcC---CCCeEEEEEe
Q 016111 178 AENN---PGARVLVVCS 191 (395)
Q Consensus 178 l~~g---~~~~vLvv~~ 191 (395)
++.+ +.+++|+++.
T Consensus 293 ~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3444 4678888774
No 157
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.15 E-value=1.4 Score=43.09 Aligned_cols=87 Identities=18% Similarity=0.137 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcCCCCccccce---ec--CccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLGLNPSVKRVM---LY--FQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lgl~~~~~~~~---~i--~~~C~~~~~aL~~A~~ll~ 179 (395)
..++.+++|+++|+++++||+|+.. +.+++.....+..+.+.+|-.....+.. .. +.+.+++...+..+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4588999999999999999988742 3233322223334444444211100011 11 2333444444445555566
Q ss_pred cC--CCCeEEEEEee
Q 016111 180 NN--PGARVLVVCSD 192 (395)
Q Consensus 180 ~g--~~~~vLvv~~d 192 (395)
.| +..++||.+++
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46778888754
No 158
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.57 E-value=3 Score=39.93 Aligned_cols=81 Identities=17% Similarity=0.058 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~~A~~ll 178 (395)
.....++.+++|+++|++++|||.++.... .+..-..+.+.||++.... ...+ +.+|++.+..|. .++
T Consensus 218 ~~~~~~~i~~~l~~~g~~~~di~~~~~h~~----~~~~~~~~~~~lg~~~~~~-~~~~~~~Gn~~~a~~~~~L~---~~~ 289 (319)
T PRK09352 218 VRELAKVAREALEAAGLTPEDIDWLVPHQA----NLRIIDATAKKLGLPMEKV-VVTVDKYGNTSAASIPLALD---EAV 289 (319)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHh-hhhHHhhCCHHHHHHHHHHH---HHH
Confidence 344667899999999999999999986432 2234467899999986531 1111 234455555553 344
Q ss_pred HcC---CCCeEEEEEe
Q 016111 179 ENN---PGARVLVVCS 191 (395)
Q Consensus 179 ~~g---~~~~vLvv~~ 191 (395)
++| +.+++|+++.
T Consensus 290 ~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 290 RDGRIKRGDLVLLEGF 305 (319)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 443 3577877764
No 159
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=86.40 E-value=3.1 Score=39.91 Aligned_cols=78 Identities=14% Similarity=-0.093 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCC-HHHHHHHHcCCCCcc--cccee-cCccchhHHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPG-ADYQLTKMLGLNPSV--KRVML-YFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~-~a~~l~~~Lgl~~~~--~~~~~-i~~~C~~~~~aL~~A~~ll~ 179 (395)
....++++++|+++|++++|||.++........... ....+....+..+.. ..... -+.++++.+..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 445578999999999999999998875544322222 222233333321110 00112 25567777777777776666
Q ss_pred cC
Q 016111 180 NN 181 (395)
Q Consensus 180 ~g 181 (395)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 55
No 160
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=85.50 E-value=3.2 Score=39.23 Aligned_cols=84 Identities=14% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHHHHHHhhccCCCCCCCce-EEEEc----CCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 277 SENIEKCLDEAFSPFGIKDWNSL-FWIVQ----PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 277 ~~~~~~~i~~~L~~~gl~~~~di-~~i~h----q~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
-..+-.+++++|+++|+++ +|| .+|.+ .+.+.+-..+.+++|+..+-... ..+=+|++.-+++++-+.
T Consensus 84 e~v~f~av~~LL~ktgv~p-~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~------nLsGMGCsAgliai~lA~ 156 (290)
T PF08392_consen 84 EMVIFGAVDDLLAKTGVKP-SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSY------NLSGMGCSAGLIAIDLAK 156 (290)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeee------cccCCcchhhHHHHHHHH
Confidence 3345678999999999998 899 55433 34567888899999998765433 255556666666655433
Q ss_pred HhhhhcCCccCCCCCceEEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
+- . +..|| .++|+++.
T Consensus 157 ~l-L---~~~p~---~~ALVVst 172 (290)
T PF08392_consen 157 DL-L---QAHPN---SYALVVST 172 (290)
T ss_pred HH-H---HhCCC---cEEEEEEE
Confidence 31 0 13566 68787774
No 161
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=85.21 E-value=1.6 Score=39.84 Aligned_cols=89 Identities=12% Similarity=0.168 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHH
Q 016111 274 TVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILD 348 (395)
Q Consensus 274 ~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~ 348 (395)
+.+.+...++++++|++.|+.+ +|| ++|.-. ..+.+--.+.++||++++--.. -.+.+|++.-...|.
T Consensus 98 ~~a~~L~~~Aa~~AL~~~g~~~-~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~------~i~~~GC~gg~~~L~ 170 (226)
T PF00195_consen 98 EEAPPLAEEAARKALAEAGLDP-SDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRT------PIFGMGCAGGAAGLR 170 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHTS-G-GGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEE------EEES-GGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCC-cccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEE------EEeccchhhHHHHHH
Confidence 3455666678889999999997 999 654322 2455667889999997653222 145566666666665
Q ss_pred HHHHhhhhcCCccCCCCCceEEEEEEcc
Q 016111 349 EIRRKSAEEGKVTTGEGLEWGVMFGIGA 376 (395)
Q Consensus 349 ~~~~~~~~~g~i~~G~~~d~vll~~~G~ 376 (395)
.+.+-.. -.|| .+||+++.=.
T Consensus 171 ~A~~~~~----~~p~---a~VLvv~vEl 191 (226)
T PF00195_consen 171 RAKDIAR----ANPG---ARVLVVCVEL 191 (226)
T ss_dssp HHHHHHH----HSTT----EEEEEEEEE
T ss_pred HHHHHHh----CCcc---ceEEEEEEEe
Confidence 4443210 2467 7899988653
No 162
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=85.21 E-value=4.9 Score=33.02 Aligned_cols=75 Identities=19% Similarity=0.205 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC---------ccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF---------QGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~---------~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||.+=+.-. +-...-...+.||+.... ...+ .||+|....++++.+
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~~~---vN~~GG~la~GHP~gasG~r~~~~l~~~ 96 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDPEK---VNPNGGALALGHPLGASGARLVVELAHQ 96 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGGGG---BSTT--HHHH-BHTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccccc---cCcccccccccccccccccchhhhhHHH
Confidence 357999999999999999998775332 223345667888887642 2222 367777778888888
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
+-+.+ .++.++
T Consensus 97 L~~~~-~~~gla 107 (123)
T PF02803_consen 97 LRRRG-GRYGLA 107 (123)
T ss_dssp HHHHT-TSEEEE
T ss_pred HHHhc-hhhhhH
Confidence 87654 455443
No 163
>PRK04262 hypothetical protein; Provisional
Probab=84.40 E-value=3 Score=40.69 Aligned_cols=81 Identities=21% Similarity=0.209 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccc-e---ec-CccchhHHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRV-M---LY-FQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~-~---~i-~~~C~~~~~aL~~A~~ll 178 (395)
....++++++|+++|++++|||.+++.... +..-..++++||++..-... . .+ |.++++...+|..+..-
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq~n----~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~~- 283 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQPN----GKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLDV- 283 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCCCc----hHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHHh-
Confidence 456778999999999999999998865322 22446788899998652110 1 12 45666666666555432
Q ss_pred HcCCCCeEEEEE
Q 016111 179 ENNPGARVLVVC 190 (395)
Q Consensus 179 ~~g~~~~vLvv~ 190 (395)
..+.+++|+++
T Consensus 284 -~~~Gd~vll~~ 294 (347)
T PRK04262 284 -AKPGDRILVVS 294 (347)
T ss_pred -CCCCCEEEEEe
Confidence 23345666655
No 164
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=84.01 E-value=4.9 Score=36.81 Aligned_cols=87 Identities=15% Similarity=-0.032 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC----CccccceecCccchhHHHHHHHHHHH
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLN----PSVKRVMLYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~----~~~~~~~~i~~~C~~~~~aL~~A~~l 177 (395)
.....++++++|+++|++++|||.++...... ..............+.. .... ...-+.++++.+..|..+...
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G~~~~as~~~~l~~~~~~ 222 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATL-IMTGHPLGAAGLAILDELLLM 222 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccc-cccccchHHHHHHHHHHHHHH
Confidence 45567889999999999999999987644332 21111111111222221 1110 111245666666666666555
Q ss_pred HHcC-------CCCeEEEEE
Q 016111 178 AENN-------PGARVLVVC 190 (395)
Q Consensus 178 l~~g-------~~~~vLvv~ 190 (395)
++.+ +.+++|+.+
T Consensus 223 ~~~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 223 LEHEFIPPTPREPRTVLLLG 242 (254)
T ss_pred HhCCCcCCCCCCcCEEEEee
Confidence 5554 445555554
No 165
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=82.90 E-value=3.3 Score=40.01 Aligned_cols=86 Identities=14% Similarity=0.072 Sum_probs=55.2
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec----CccchhHHHHHH
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY----FQGCYIGATAIR 172 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i----~~~C~~~~~aL~ 172 (395)
...+.+..+..++++++|++++++++|||.++... .-...-..++++||++... ....+ |.+-++...+|.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k-~~~~~~~yGNtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEK-VVVTVDKYGNTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHH-HhhHHHHhcccccchHHHHHH
Confidence 34556788889999999999999999999988532 2223457889999997653 13333 233344444554
Q ss_pred HHHHHHHcCC---CCeEEEEE
Q 016111 173 MAKDFAENNP---GARVLVVC 190 (395)
Q Consensus 173 ~A~~ll~~g~---~~~vLvv~ 190 (395)
.+ ++.|+ .+.+|+++
T Consensus 291 ~~---~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 EA---LREGRIKPGDLVLLEA 308 (323)
T ss_pred HH---hhhCCCCCCCEEEEEe
Confidence 43 34443 35565554
No 166
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=82.39 E-value=4.2 Score=39.99 Aligned_cols=78 Identities=12% Similarity=-0.084 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce------ecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVM------LYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~------~i~~~C~~~~~aL~~A~~ll 178 (395)
-...|++++|+++|++++|||.+...-. .........+.||+........ .--.|++|......+..++-
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~ea----fa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~ 334 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINEA----FASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAK 334 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecch----hHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHH
Confidence 4567999999999999999999876332 2233455667888865421011 12347777777778888776
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
+.| .++.+
T Consensus 335 ~~~-~~~g~ 342 (361)
T PRK06690 335 RED-MKYGI 342 (361)
T ss_pred HhC-CCEEE
Confidence 654 44444
No 167
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=80.90 E-value=3.6 Score=41.00 Aligned_cols=71 Identities=17% Similarity=0.064 Sum_probs=52.5
Q ss_pred HHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCc------------------cchhHHHHHHHhcCCCccc
Q 016111 281 EKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQ------------------QKLSATRHVLSEYGNMGGV 341 (395)
Q Consensus 281 ~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~------------------e~~~~~~~~~~~~Gn~~sa 341 (395)
..+++++|+++|+++ +|| .+=+|-.-...--...+.||+.+ .++-.+ --.-.+||-..|
T Consensus 272 ~~A~~~al~~Agi~~-~DID~~Ei~d~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~-GG~la~GhP~gA 349 (393)
T cd00826 272 IEAARKALEKAGLGI-GDLDLIEAHDAFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPN-GGAIAIGHPIGA 349 (393)
T ss_pred HHHHHHHHHHcCCCH-HHcCeeehhhhhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCC-CchhhcCCCccc
Confidence 367889999999997 999 88888876666666778899875 233221 123458999988
Q ss_pred hHHHHHHHHHHh
Q 016111 342 SVFFILDEIRRK 353 (395)
Q Consensus 342 s~~i~L~~~~~~ 353 (395)
+-...+.++..+
T Consensus 350 tG~~~~~e~~~q 361 (393)
T cd00826 350 SGAAICAELCFE 361 (393)
T ss_pred cHHHHHHHHHHH
Confidence 888888887765
No 168
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.56 E-value=6.6 Score=38.48 Aligned_cols=81 Identities=7% Similarity=-0.049 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccce--e-c-CccchhHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVM--L-Y-FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~--~-i-~~~C~~~~~aL~~A~~l 177 (395)
......++++++|+++|++++|||.+++.... +..-..+.++||++..-.... . + |.+.++...+|. .+
T Consensus 240 ~~~~~~~~i~~~L~~~gl~~~did~~v~HQ~~----~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~---~~ 312 (353)
T PRK12880 240 ALECEPKSFKEILEFSKVDEKDIAFHLFHQSN----AYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC---EL 312 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 34555678999999999999999999974432 234578999999987531111 1 1 345555555555 33
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
+..+..+ +|+++
T Consensus 313 ~~~~~~~-~ll~~ 324 (353)
T PRK12880 313 DTPKEFK-ASLSA 324 (353)
T ss_pred HHcCCcE-EEEEE
Confidence 5556544 44444
No 169
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=78.18 E-value=5.3 Score=39.88 Aligned_cols=78 Identities=15% Similarity=0.133 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc-c-----ceecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK-R-----VMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~-~-----~~~i~~~C~~~~~aL~~A~~ll 178 (395)
-...|++++|+++|++++|||++-..- .+........+.||+...+. + .+-.-.|++|....+..+.+|-
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~ 373 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLR 373 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHH
Confidence 446899999999999999999886321 12223345567788754320 0 1111235666667777777776
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
..+ .++.|
T Consensus 374 ~~~-~~~g~ 381 (399)
T PRK09052 374 RTN-LKYGM 381 (399)
T ss_pred hcC-CCeEE
Confidence 544 34443
No 170
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=78.14 E-value=7.3 Score=38.91 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHHHc
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..|++++|+++|++++|||++=+.- .+....-...+.||+...+.. .+-.-.|++|....+.++.+|-+.
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~~ 378 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPHDKVNVNGGAIAMGHPLGATGAMILGTVLDELERR 378 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHhc
Confidence 4699999999999999999887522 222333456788887643200 111123566666667777777654
Q ss_pred CCCCeEEE
Q 016111 181 NPGARVLV 188 (395)
Q Consensus 181 g~~~~vLv 188 (395)
+ .++.|+
T Consensus 379 ~-~~~g~~ 385 (402)
T PRK08242 379 G-KRTALI 385 (402)
T ss_pred C-CCeEEE
Confidence 4 455444
No 171
>PRK09051 beta-ketothiolase; Provisional
Probab=77.60 E-value=6.4 Score=39.21 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc-cc-----eecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK-RV-----MLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~-~~-----~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++=..- .+....-...+.||+...+. +. +-.-.|++|....+.++.+|-+
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~~ 369 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDPAKVNPNGSGISLGHPVGATGAIITVKALYELQR 369 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCccccCCCccHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 46799999999999999999887522 12233455668888864320 00 1111244555555666666654
Q ss_pred cCCCCeEE
Q 016111 180 NNPGARVL 187 (395)
Q Consensus 180 ~g~~~~vL 187 (395)
.+ .++.|
T Consensus 370 ~~-~~~g~ 376 (394)
T PRK09051 370 IG-GRYAL 376 (394)
T ss_pred cC-CCEEE
Confidence 43 34444
No 172
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=77.41 E-value=1.5 Score=35.60 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEEec-CCCCCCCHHHHHHHHcCCCC---ccccce-----ecCccchhHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFCSL-VGVDMPGADYQLTKMLGLNP---SVKRVM-----LYFQGCYIGATAIRMA 174 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~s~-t~~~~p~~a~~l~~~Lgl~~---~~~~~~-----~i~~~C~~~~~aL~~A 174 (395)
+-..++++++|+++|++|+|||+|....+ ++...+.-+.-+.+.++-.. .+ +.. .-....++++..|..+
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~-~v~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPV-PVGSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTS-EEE-THHHH-B-GGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccccccccc-ceeccccccccccccchHHHHHHH
Confidence 34467899999999999999998875332 22222334455555555332 11 011 1134556666666666
Q ss_pred HHHHHcC
Q 016111 175 KDFAENN 181 (395)
Q Consensus 175 ~~ll~~g 181 (395)
--.++.+
T Consensus 104 ~l~l~~~ 110 (119)
T PF02801_consen 104 LLALEHG 110 (119)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 6666655
No 173
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=76.38 E-value=9.6 Score=39.23 Aligned_cols=81 Identities=25% Similarity=0.209 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCc--------cchhHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQ--------GCYIGATAIRMAKDF 177 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~--------~C~~~~~aL~~A~~l 177 (395)
...|++++++.+|++++|||++=+-+|. |.......+.||+...-.+-..++. +.+.++..+.-+...
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elydcF----~~~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~Q 369 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYSCF----PSAVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVER 369 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEeccCC----HHHHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHH
Confidence 3569999999999999999999876653 3333555688887654000111221 222344454444445
Q ss_pred HHcCCCCeEEEEE
Q 016111 178 AENNPGARVLVVC 190 (395)
Q Consensus 178 l~~g~~~~vLvv~ 190 (395)
|+....++.|+.+
T Consensus 370 LRg~~~~~gLv~~ 382 (498)
T PRK08257 370 LRANPGRRGLVTA 382 (498)
T ss_pred HhhcCCCEEEEEC
Confidence 5544466666654
No 174
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=76.37 E-value=6 Score=39.59 Aligned_cols=45 Identities=11% Similarity=0.124 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lg 149 (395)
=+.+|.+.||+++|++++|||+|-. +|+|+.....-+..|..-+|
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 4568999999999999999999874 55555444445566666666
No 175
>PLN03173 chalcone synthase; Provisional
Probab=76.20 E-value=10 Score=37.81 Aligned_cols=86 Identities=15% Similarity=0.098 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+.+...++++++|+++|+.+ +|| ++|... ..+..--.++++||++.+-.. --..+++++.-...|..
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~-~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~~~~~gC~g~~~aL~~ 173 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKR------FMMYQQGCFAGGTVLRL 173 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCcccHHHHHHHHHhCCCcccee------eehhcCccHHHHHHHHH
Confidence 344555678899999999997 999 654432 234455568899999764211 11356777887878776
Q ss_pred HHHhhhhcCCccCCCCCceEEEEEE
Q 016111 350 IRRKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 350 ~~~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
+.+- .+ -.++ .+||+++.
T Consensus 174 A~~~-~~---~~~~---~~vLVV~~ 191 (391)
T PLN03173 174 AKDL-AE---NNKG---ARVLVVCS 191 (391)
T ss_pred HHHH-HH---hCCC---CeEEEEEE
Confidence 6442 11 1244 67777653
No 176
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=76.15 E-value=6.4 Score=39.31 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC---------ccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF---------QGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~---------~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||++-+.- .++...-...+.||+..... ....+ .|++|....++++.+
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~D----~f~~~~l~~~e~lg~~~~~~-pvN~~GG~la~Ghp~gasG~~~~~e~~~q 373 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELNE----AFAAQGLAVLRQLGLADDDA-RVNPNGGAIALGHPLGMSGARLVLTALHQ 373 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccCc----HhHHHHHHHHHHcCCCCCCC-CEeCCCchHhcCCchhHHHHHHHHHHHHH
Confidence 35799999999999999999877322 22233345667888743110 11122 245555566667766
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
|-..+ .++.|+
T Consensus 374 Lr~~~-~~~g~~ 384 (401)
T PRK09050 374 LERTG-GRYALC 384 (401)
T ss_pred HHhcC-CCeEEE
Confidence 65543 445443
No 177
>PLN03168 chalcone synthase; Provisional
Probab=74.85 E-value=10 Score=37.64 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEEEcCC----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPG----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+.+.-.++.+++|+++|+++ +|| ++|+... .+..--.++++||++..-.. --..|++++.-...|..
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~-~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r------~~d~~~gC~g~~~aL~~ 172 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRK-SDITHIVFATTSGVNMPGADHALAKLLGLKPTVKR------VMMYQTGCFGGASVLRV 172 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCccHHHHHHHHhCcCCccee------eeeeCCccHHHHHHHHH
Confidence 344555678899999999997 999 6655532 23445568899999754211 12456788888888876
Q ss_pred HHHhhhhcCCccCCCCCceEEEEEE
Q 016111 350 IRRKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 350 ~~~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
+..- .+ -.++ .+||+++.
T Consensus 173 A~~~-i~---~~~~---~~VLVV~~ 190 (389)
T PLN03168 173 AKDL-AE---NNKG---ARVLAVAS 190 (389)
T ss_pred HHHH-HH---hCCC---CEEEEEEE
Confidence 6442 11 1234 57777653
No 178
>PLN03172 chalcone synthase family protein; Provisional
Probab=74.82 E-value=9.7 Score=37.94 Aligned_cols=86 Identities=16% Similarity=0.101 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+.+...++++++|+++|+++ +|| ++|... ..+.+--.++++||++.+-.. -...|+++++-...|..
T Consensus 101 ~a~~La~~Aa~~aL~~ag~~~-~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~------~~~~~~gC~g~~~aL~~ 173 (393)
T PLN03172 101 EVPKLGKEAAAKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKR------FMMYQQGCFAGGTVLRL 173 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceE------EeeeCCchHHHHHHHHH
Confidence 345555678899999999997 999 654332 234455668899999764211 02457788888888876
Q ss_pred HHHhhhhcCCccCCCCCceEEEEEE
Q 016111 350 IRRKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 350 ~~~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
+.+- .+ -.++ .+||+++.
T Consensus 174 A~~~-~~---~~~~---~~vLVV~~ 191 (393)
T PLN03172 174 AKDL-AE---NNAG---SRVLVVCS 191 (393)
T ss_pred HHHH-HH---cCCC---CeEEEEEE
Confidence 6543 11 1234 57776654
No 179
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=74.29 E-value=11 Score=35.95 Aligned_cols=88 Identities=19% Similarity=0.107 Sum_probs=56.2
Q ss_pred HHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc-c-----ceec-CccchhHHHHH
Q 016111 99 VREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK-R-----VMLY-FQGCYIGATAI 171 (395)
Q Consensus 99 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~-~-----~~~i-~~~C~~~~~aL 171 (395)
.+.......++++++|++.|++ ++||.++...... +..-..+.++|+++.... . .-.+ +.+|++...+|
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L 293 (324)
T cd00827 218 FEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGL 293 (324)
T ss_pred HHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHH
Confidence 3456677888999999999999 9999887644321 145678899999852210 0 1112 45666666666
Q ss_pred HHHHHHHHcC---CCCeEEEEEeec
Q 016111 172 RMAKDFAENN---PGARVLVVCSDL 193 (395)
Q Consensus 172 ~~A~~ll~~g---~~~~vLvv~~d~ 193 (395)
..+ +..+ +.+++|+++.-.
T Consensus 294 ~~~---~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 294 ASL---LESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHH---HhcCCCCCCCEEEEEEecc
Confidence 544 3433 357888877543
No 180
>PLN02377 3-ketoacyl-CoA synthase
Probab=73.96 E-value=11 Score=38.88 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+...+.++++++|+++|+++ +|| .+|... ..+..--.++++||+..+-... ..+-+|++.-+++|+.
T Consensus 171 ea~~l~~~A~~~aL~kaGi~p-~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~af------dL~gmGCsggl~aL~l 243 (502)
T PLN02377 171 EAEQVMFGALDNLFANTNVNP-KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF------NLGGMGCSAGVIAVDL 243 (502)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEE------ecccchhhHHHHHHHH
Confidence 344455678899999999998 999 666532 2355667789999997543222 1344566666666655
Q ss_pred H
Q 016111 350 I 350 (395)
Q Consensus 350 ~ 350 (395)
+
T Consensus 244 A 244 (502)
T PLN02377 244 A 244 (502)
T ss_pred H
Confidence 4
No 181
>PLN03170 chalcone synthase; Provisional
Probab=73.71 E-value=16 Score=36.49 Aligned_cols=85 Identities=16% Similarity=0.141 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEE-EcC-C--ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWI-VQP-G--GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i-~hq-~--~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+.+...++.+++|+++|+++ +|| ++| ... + .+..--.++++||++..-.. .-..|++++.-+..|..
T Consensus 105 ~a~~La~~Aa~~AL~~ag~~~-~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r------~~d~~~gC~G~~~aL~~ 177 (401)
T PLN03170 105 EVPKLGKAAAQKAIKEWGQPK-SKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNR------LMMYQQGCFAGGTVLRV 177 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHH------HHhhcChhHHHHHHHHH
Confidence 344555678899999999997 999 553 332 1 33455668899999765211 12456788888888876
Q ss_pred HHHhhhhcCCccCCCCCceEEEEE
Q 016111 350 IRRKSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 350 ~~~~~~~~g~i~~G~~~d~vll~~ 373 (395)
+.+- .+ -.++ .+||+++
T Consensus 178 A~~l-~~---~~~~---~~vLVV~ 194 (401)
T PLN03170 178 AKDL-AE---NNRG---ARVLVVC 194 (401)
T ss_pred HHHH-HH---cCCC---CeEEEEE
Confidence 6542 11 1234 6777764
No 182
>PLN02192 3-ketoacyl-CoA synthase
Probab=73.69 E-value=10 Score=38.94 Aligned_cols=85 Identities=15% Similarity=0.260 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHH
Q 016111 275 VVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDE 349 (395)
Q Consensus 275 ~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~ 349 (395)
.+...+.++++++|+++|+++ +|| .+|... ..+..--.+.+++|+..+-... ..+-+|++.-+++|+.
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p-~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~af------dLsgmGCSggl~aLdl 247 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKP-KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSY------NLGGMGCSAGLISIDL 247 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEE------EcccchhhhHHHHHHH
Confidence 344556678899999999998 999 655432 3455667789999987432222 2555677777777765
Q ss_pred HHHhhhhcCCccCCCCCceEEEEE
Q 016111 350 IRRKSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 350 ~~~~~~~~g~i~~G~~~d~vll~~ 373 (395)
+.+- .+ ..++ .++|+++
T Consensus 248 A~~l-L~---a~~~---~~aLVVs 264 (511)
T PLN02192 248 AKHL-LQ---VHPN---SYALVIS 264 (511)
T ss_pred HHHH-HH---cCCC---CeEEEEE
Confidence 5332 11 1244 5677665
No 183
>PLN02287 3-ketoacyl-CoA thiolase
Probab=72.96 E-value=8.5 Score=39.08 Aligned_cols=98 Identities=14% Similarity=0.055 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++=+.- .+....-...+.||+...+.. .+-.-.|++|....+.++.+|-+
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~ 408 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR 408 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999884321 111122334577887543200 01112366777777777777766
Q ss_pred cCC-CCeEEEEEeeccccccCCCCCCCchhhhhhhhhccccEEEEEecCCC
Q 016111 180 NNP-GARVLVVCSDLSLGTFRGPSDANLGCLAGQALFGDGAAALIIGANPD 229 (395)
Q Consensus 180 ~g~-~~~vLvv~~d~~s~~~~~~~~~~~~~~~~~~~fGDgAaA~vl~~~~~ 229 (395)
.+. .++.|+.. +.-|--+.|+||++.+.
T Consensus 409 ~~~~~~~gl~~~----------------------c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 409 RGKDCRFGVVSM----------------------CIGTGMGAAAVFERGDS 437 (452)
T ss_pred cCCCCCeeEEEE----------------------ccccCceeEEEEEecCc
Confidence 542 14444322 23355667888887654
No 184
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=72.85 E-value=6.1 Score=41.07 Aligned_cols=45 Identities=16% Similarity=0.078 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
..++.++||+++|++|+|||+|- ++|.|+..-+.-...|...+|-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 45789999999999999999875 3444553223344566666663
No 185
>PLN02932 3-ketoacyl-CoA synthase
Probab=72.82 E-value=11 Score=38.48 Aligned_cols=70 Identities=21% Similarity=0.354 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 276 VSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 276 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+.....++++++|+++|+++ +|| ++|... ..+..--.+.++||++.+-... .++-+|++.-+++|..+
T Consensus 148 a~~la~~Aa~~aL~~agi~p-~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~f------dL~gmGCSggl~aL~lA 220 (478)
T PLN02932 148 TEEVIIGAVDNLFRNTGISP-SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSL------NLGGMGCSAGVIAIDAA 220 (478)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEE------EeccchhhhHHHHHHHH
Confidence 34445578899999999998 998 554332 3445666789999997543222 25557788888887765
Q ss_pred HH
Q 016111 351 RR 352 (395)
Q Consensus 351 ~~ 352 (395)
.+
T Consensus 221 ~~ 222 (478)
T PLN02932 221 KS 222 (478)
T ss_pred HH
Confidence 44
No 186
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=72.50 E-value=11 Score=37.48 Aligned_cols=45 Identities=16% Similarity=-0.005 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
-..++.++||+++|+ ++|||+|.. +|.|+..-..-...|.+.++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 346899999999999 899999763 344443333345666666664
No 187
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=72.23 E-value=18 Score=35.34 Aligned_cols=69 Identities=20% Similarity=0.326 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhhccCCCCCCCce-EEEEcCC----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 276 VSENIEKCLDEAFSPFGIKDWNSL-FWIVQPG----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 276 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
..+...++++++|+++|+++ +|| .++.... .+..-..+.++||++.+.... . +...++++...+|..+
T Consensus 85 ~~~la~~Aa~~aL~~a~~~~-~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~-----d-v~~~~C~~~~~al~~A 157 (361)
T cd00831 85 ARELAEEAARGALDEAGLRP-SDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRY-----N-LGGMGCSAGAIALDLA 157 (361)
T ss_pred HHHHHHHHHHHHHHHhCCCH-HHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchh-----c-cccccchhHHHHHHHH
Confidence 34445678899999999997 999 5554322 223445788999997543222 2 3223555555555544
Q ss_pred H
Q 016111 351 R 351 (395)
Q Consensus 351 ~ 351 (395)
.
T Consensus 158 ~ 158 (361)
T cd00831 158 K 158 (361)
T ss_pred H
Confidence 3
No 188
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=71.68 E-value=17 Score=36.12 Aligned_cols=78 Identities=17% Similarity=0.065 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK------RVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~------~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||.+=+.-+ +....-...+.||+...+. .++-.-.||+|....++++.+|-.
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d~----f~~~~l~~~e~lg~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~ 369 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINEA----FAVVVLYAIKELGLDPETVNIKGGAIAIGHPLGATGARIVGTLARQLQI 369 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeccc----chHHHHHHHHHhCCCccccCCCCCHHHcCCCccchHHHHHHHHHHHHHh
Confidence 357999999999999999998876442 2233455667788764320 011222477777777888888854
Q ss_pred cCCCCeEEE
Q 016111 180 NNPGARVLV 188 (395)
Q Consensus 180 ~g~~~~vLv 188 (395)
.+ .++.|+
T Consensus 370 ~~-~~~gl~ 377 (394)
T PRK06445 370 KG-KDYGVA 377 (394)
T ss_pred cC-CCEEEE
Confidence 33 345443
No 189
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=71.47 E-value=7.9 Score=38.64 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceec--------CccchhHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLY--------FQGCYIGATAIRMAKDF 177 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i--------~~~C~~~~~aL~~A~~l 177 (395)
...|++++|+++|++++|||++-+.- .++...-...+.||+.....+.-.. -.|++|....++++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~D----~f~~~~l~~~e~lG~~~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qL 373 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELNE----AFAAQALAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVLTALRQL 373 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccCc----HHHHHHHHHHHHcCCCCCCCeECCCCchHhccChHHHHHHHHHHHHHHHH
Confidence 45799999999999999999877322 2223344566788874321001111 12455556666777776
Q ss_pred HHcCCCCeEEE
Q 016111 178 AENNPGARVLV 188 (395)
Q Consensus 178 l~~g~~~~vLv 188 (395)
-..+ .++.|+
T Consensus 374 r~~~-~~~g~~ 383 (400)
T TIGR02430 374 ERSG-GRYALC 383 (400)
T ss_pred HhcC-CCEEEE
Confidence 5433 445444
No 190
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=71.06 E-value=9.5 Score=37.97 Aligned_cols=79 Identities=19% Similarity=0.153 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc-c-----ceecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK-R-----VMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~-~-----~~~i~~~C~~~~~aL~~A~~ll 178 (395)
-...|++++|+++|++++|||.+-+.-. ++...-...+.||+...+. + .+-.-.|++|....++++.+|-
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d~----f~~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~ 365 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNEA----FASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMK 365 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCCH----HHHHHHHHHHHcCCCCCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHH
Confidence 3468999999999999999998874221 2222233346788753210 0 1111236677777777777776
Q ss_pred HcCCCCeEEE
Q 016111 179 ENNPGARVLV 188 (395)
Q Consensus 179 ~~g~~~~vLv 188 (395)
+.| .++.|+
T Consensus 366 ~~~-~~~g~~ 374 (391)
T PRK07661 366 RRN-EQFGIV 374 (391)
T ss_pred hcC-CCeEEE
Confidence 654 345443
No 191
>PRK05790 putative acyltransferase; Provisional
Probab=70.67 E-value=12 Score=37.10 Aligned_cols=79 Identities=15% Similarity=0.162 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||.+-+.- .+....-...+.||+...+.. .+-.-.|++|....++++.+|-.
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~~ 368 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDPEKVNVNGGAIALGHPIGASGARILVTLLHEMKR 368 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCChhhcCCCcchhhhCcchhhhHHHHHHHHHHHHHh
Confidence 35799999999999999999886422 122233455677886432100 11112355566666666666654
Q ss_pred cCCCCeEEEE
Q 016111 180 NNPGARVLVV 189 (395)
Q Consensus 180 ~g~~~~vLvv 189 (395)
. ..++.|+-
T Consensus 369 ~-~~~~gl~~ 377 (393)
T PRK05790 369 R-GAKKGLAT 377 (393)
T ss_pred c-CCCeEEEE
Confidence 3 34555543
No 192
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=70.58 E-value=12 Score=37.49 Aligned_cols=78 Identities=13% Similarity=0.098 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc----ccc-----ceecCccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS----VKR-----VMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~----~~~-----~~~i~~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||.+-+.-+ ++...-...+.||+... +.+ .+---.|++|....++++.+
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d~----f~~~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~q 375 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNEA----FAAQVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRE 375 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeeccH----HHHHHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHH
Confidence 467999999999999999998874332 22223444566776431 100 01111244555555566666
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
|-..+ .++.|+
T Consensus 376 L~~~~-~~~gl~ 386 (404)
T PRK06205 376 LQRRQ-ARYGLE 386 (404)
T ss_pred HHhcC-CCeEEE
Confidence 65443 445444
No 193
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=70.01 E-value=7.5 Score=39.04 Aligned_cols=46 Identities=22% Similarity=0.195 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcCC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
-..++.+++|+++|++++|||+|- +++.|+..-+.-...|...+|-
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 467899999999999999999885 3444443344456677777774
No 194
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=69.84 E-value=14 Score=36.74 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
..|++++|+++|++++|||++-..- .+........+.||+..
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~ 335 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA 335 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC
Confidence 5799999999999999999887522 12233445567788753
No 195
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=69.39 E-value=11 Score=37.73 Aligned_cols=77 Identities=13% Similarity=0.093 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC---------ccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF---------QGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~---------~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||++-+.- .+....-...+.||+..... ....+ .+++|....+.++.+
T Consensus 298 ~~~A~~~al~~AGl~~~DID~iei~d----afa~~~l~~~e~lg~~~~~~-pvN~~GG~la~GHp~gasG~~~v~e~~~q 372 (400)
T PRK13359 298 PAPATQKLLARLGMTLDQFDVIELNE----AFASQGLAVLRELGLADDDA-RVNPNGGAIALGHPLGASGARLVTTALYQ 372 (400)
T ss_pred HHHHHHHHHHHhCCCHHHcCcCccCc----HhHHHHHHHHHHcCCCCCCC-CEECCCchhhcCCchhHHHHHHHHHHHHH
Confidence 36899999999999999999877322 12223345567788732100 11222 245565666666666
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
|-..+ .++.|+
T Consensus 373 L~~~~-~~~g~~ 383 (400)
T PRK13359 373 LERTG-GRFALC 383 (400)
T ss_pred HhhcC-CCeEEE
Confidence 65433 455544
No 196
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.09 E-value=7.6 Score=38.73 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
..+|++++|+++|++++|||+|- +++.|+...+....-+...+|.
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 45789999999999999999985 3444443333344556666663
No 197
>PLN00415 3-ketoacyl-CoA synthase
Probab=68.54 E-value=11 Score=38.36 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=49.8
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCC----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPG----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
+-.+++++|+++|+++ +|| ++|.... .+..--.+.+++|++++-... ..+.+|++.-++.|..+.+-
T Consensus 138 i~~A~~~aL~~aGi~p-~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~------dL~gmGCsggv~aL~lA~~l- 209 (466)
T PLN00415 138 IFGALNSLFKKTGIEP-REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTY------NLSGMGCSAGAISVDLATNL- 209 (466)
T ss_pred HHHHHHHHHHHcCCCH-HHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEE------EeccccchHHHHHHHHHHHH-
Confidence 4457889999999998 999 6665432 234455688999997443222 25566667777776655432
Q ss_pred hhcCCccCCCCCceEEEEE
Q 016111 355 AEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 355 ~~~g~i~~G~~~d~vll~~ 373 (395)
.+ ..++ .++|+++
T Consensus 210 l~---a~~~---~~aLVVs 222 (466)
T PLN00415 210 LK---ANPN---TYAVIVS 222 (466)
T ss_pred HH---hCCC---CEEEEEE
Confidence 10 2345 5677655
No 198
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=68.42 E-value=18 Score=35.80 Aligned_cols=42 Identities=24% Similarity=0.090 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
...|++++|+++|++++|||.+-...+. +.......+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~f----t~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCF----TIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCC----cHHHHHHHHHcCCC
Confidence 4579999999999999999987654432 12334456667763
No 199
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=68.41 E-value=12 Score=37.22 Aligned_cols=78 Identities=10% Similarity=0.136 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll 178 (395)
....|++++|+++|++++|||.+-+.- .++...-...+.||+...+.. .+-.-.|++|....+.++.+|-
T Consensus 292 ~~~~a~~~al~~agl~~~did~~e~~d----~f~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~ 367 (393)
T PRK08235 292 TPGYAINALLEKTGKTVEDIDLFEINE----AFAAVALASTEIAGIDPEKVNVNGGAVALGHPIGASGARIIVTLIHELK 367 (393)
T ss_pred hHHHHHHHHHHHhCCCHHHCCeehhcc----hhHHHHHHHHHHhCCCcccCCcCCchHHhCCcHHHHHHHHHHHHHHHHH
Confidence 346799999999999999999885321 223334556778887533200 1111236677777777777776
Q ss_pred HcCCCCeEE
Q 016111 179 ENNPGARVL 187 (395)
Q Consensus 179 ~~g~~~~vL 187 (395)
..+ .++.|
T Consensus 368 ~~~-~~~g~ 375 (393)
T PRK08235 368 RRG-GGIGI 375 (393)
T ss_pred hcC-CCeEE
Confidence 533 34433
No 200
>PRK12404 stage V sporulation protein AD; Provisional
Probab=67.42 E-value=46 Score=32.12 Aligned_cols=73 Identities=11% Similarity=0.158 Sum_probs=47.3
Q ss_pred CchhHHHH-HHHHHHHHHHhhccCCCCCCCce-EEEEcCC-ChHHH-HHHHHHcCCCccchhHHHHHHHhcCCCccchHH
Q 016111 269 SKNVATVV-SENIEKCLDEAFSPFGIKDWNSL-FWIVQPG-GPAIV-NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVF 344 (395)
Q Consensus 269 ~~~v~~~~-~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~-~~~~~-~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~ 344 (395)
|.+.++.+ .+.+.++++++|+++|+++ +|| +++.... |..+. ..+++.||+|. +.-+|-|++..--
T Consensus 46 g~~swEkAE~~L~~EA~~~AL~kAGI~~-~DID~i~vGdL~nQ~ipssfvar~LGIP~---------~gV~gACSTg~eA 115 (334)
T PRK12404 46 GQDSYEKAERKLLEEACSRAIEKAKLRK-EDIQFFLAGDLMNQITPTSFAARTLGIPY---------LGLFGACSTSMEG 115 (334)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHcCCCH-HHCCEEEEEecCCCcCcHHHHHHHhCCCc---------cceeecCHHHHHH
Confidence 34444333 3345688999999999997 999 6555332 22222 26678899763 4557778877777
Q ss_pred HHHHHHH
Q 016111 345 FILDEIR 351 (395)
Q Consensus 345 i~L~~~~ 351 (395)
+.++..+
T Consensus 116 L~lAa~~ 122 (334)
T PRK12404 116 LALAALI 122 (334)
T ss_pred HHHHHHH
Confidence 7777543
No 201
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=67.38 E-value=11 Score=37.67 Aligned_cols=78 Identities=13% Similarity=0.066 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK------RVMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~------~~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++=..- .++...-.-.+.||+...+. ..+---.||+|....+.+..+|-+
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~d----~f~~~~l~~le~lg~~~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~ 380 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEINE----AFAAQVLPSARELGIDEDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT 380 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhhh----HHHHHHHHHHHHhCCCccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh
Confidence 45799999999999999999884211 12222333447788743210 011112366666666777777755
Q ss_pred cCCCCeEEE
Q 016111 180 NNPGARVLV 188 (395)
Q Consensus 180 ~g~~~~vLv 188 (395)
.+ .++.|+
T Consensus 381 ~~-~~~g~~ 388 (406)
T PRK07851 381 HD-KTFGLE 388 (406)
T ss_pred cC-CCeEEE
Confidence 33 455444
No 202
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=66.11 E-value=8.9 Score=38.04 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
..++++++|+++|++++|||+|.. .+.|+..-+.....+...+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 568999999999999999998763 344433334445556666664
No 203
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.29 E-value=12 Score=37.34 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lg 149 (395)
-..++++++|+++|++++|||+|. ++|.|+..-+..+..|...+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 446899999999999999999885 345555333445567777776
No 204
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=65.22 E-value=12 Score=37.49 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lg 149 (395)
...+|++++|+++|++|+|||+|- +++.|+..-+.-+.-|.+.+|
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 457889999999999999999874 344444333444566666666
No 205
>PLN02854 3-ketoacyl-CoA synthase
Probab=65.06 E-value=19 Score=37.16 Aligned_cols=69 Identities=23% Similarity=0.297 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 277 SENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 277 ~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
-..+-.+++++|+++|+++ +|| .+|... ..+..--.+.+++|+..+-... ..+-+|++.-+++|+.+.
T Consensus 189 ~~v~~~~~~~lL~kaGi~p-~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~af------dLsgmGCSggl~aL~lA~ 261 (521)
T PLN02854 189 EAVMFGALDSLFSKTGVKP-RDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSY------NLGGMGCSAGLISIDLAN 261 (521)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEE------ecccchhhhHHHHHHHHH
Confidence 3344567889999999998 999 665532 2344566688999986543222 245567777777776553
Q ss_pred H
Q 016111 352 R 352 (395)
Q Consensus 352 ~ 352 (395)
+
T Consensus 262 ~ 262 (521)
T PLN02854 262 D 262 (521)
T ss_pred H
Confidence 3
No 206
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=64.72 E-value=15 Score=36.43 Aligned_cols=78 Identities=12% Similarity=0.009 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcCCCCccccce-----ecCccchhHHHHHHHHHHH
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLGLNPSVKRVM-----LYFQGCYIGATAIRMAKDF 177 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lgl~~~~~~~~-----~i~~~C~~~~~aL~~A~~l 177 (395)
.-..++++++|+++|++++|||+|... +.++...+..+..+...++-.....+.. .-+..+++++..|..+...
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 354 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA 354 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence 445678999999999999999987753 3333333344455555555421110011 1134566677777777777
Q ss_pred HHcC
Q 016111 178 AENN 181 (395)
Q Consensus 178 l~~g 181 (395)
|+.+
T Consensus 355 l~~~ 358 (406)
T cd00834 355 LRDG 358 (406)
T ss_pred HhcC
Confidence 7766
No 207
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=64.48 E-value=21 Score=35.41 Aligned_cols=42 Identities=29% Similarity=0.237 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
...|++++|+++|++|+|||.+-...+ ++...-...+.||+.
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d~----fa~~~~~~~e~lG~~ 329 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINEA----FAAQVLACIKELGLD 329 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcch----hHHHHHHHHHHhCCC
Confidence 358999999999999999998844322 122223344777764
No 208
>PLN03169 chalcone synthase family protein; Provisional
Probab=64.45 E-value=34 Score=34.05 Aligned_cols=86 Identities=16% Similarity=0.150 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCCCCcccc-----ceec-CccchhHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGLNPSVKR-----VMLY-FQGCYIGATAIRMA 174 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl~~~~~~-----~~~i-~~~C~~~~~aL~~A 174 (395)
...-..+.++++|+++|++++|||.+.+ .+. .-...-..++++||++..-.+ .-.+ |+++++...+|..+
T Consensus 279 ~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq---~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 279 IEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHP---GGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCcceEEecC---CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 3444455778999999999999984322 121 123355788999999865211 1122 56777777777655
Q ss_pred HHH--HH-cCCCCeEEEEE
Q 016111 175 KDF--AE-NNPGARVLVVC 190 (395)
Q Consensus 175 ~~l--l~-~g~~~~vLvv~ 190 (395)
..- ++ ..+.+++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 11 11246777666
No 209
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=64.32 E-value=28 Score=34.57 Aligned_cols=80 Identities=8% Similarity=-0.001 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccc------cceecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVK------RVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~------~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
-...|++++|+++|++++|||.+=+.-+. +...-...+.||+...+. .++-.-.+|+|....++++.+|-
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d~F----~~~~l~~~e~lg~~~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~ 361 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINEAF----ASVVLSWAQVHEPDMDKVNVNGGAIALGHPVGSTGARLITTALHELE 361 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecccc----hHHHHHHHHHcCCCCCCcCCCCchhhcCCCcchhHHHHHHHHHHHHH
Confidence 34689999999999999999988774432 222234446777643210 01111234556666666777775
Q ss_pred HcCCCCeEEEE
Q 016111 179 ENNPGARVLVV 189 (395)
Q Consensus 179 ~~g~~~~vLvv 189 (395)
+.+ .++.|+.
T Consensus 362 ~~~-~~~g~~~ 371 (387)
T PRK07850 362 RTD-KSTALIT 371 (387)
T ss_pred hcC-CCeEEEE
Confidence 543 4555443
No 210
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.29 E-value=12 Score=36.99 Aligned_cols=46 Identities=9% Similarity=0.064 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lg 149 (395)
....+|++++|+++|++|+|||+|-. +|.|+..-+.-...|.+-+|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 45678999999999999999999763 44444333333445555555
No 211
>PLN03171 chalcone synthase-like protein; Provisional
Probab=63.98 E-value=27 Score=34.85 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHhhccCCCCCCCce-EEEEcC----CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHH
Q 016111 276 VSENIEKCLDEAFSPFGIKDWNSL-FWIVQP----GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEI 350 (395)
Q Consensus 276 ~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq----~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~ 350 (395)
+.+...++.+++|+++|+++ +|| ++|+.. ..+..--.++++||++..-... -..++ ++++-+..|..+
T Consensus 108 a~~la~~Aa~~aL~~ag~~~-~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~-----~~~~~-gC~g~~~aL~~A 180 (399)
T PLN03171 108 VPELAAEAAKKAIAEWGRPA-ADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRT-----MLHLN-GCFAGAAALRLA 180 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHCCEEEEEcCCCCCCCchHHHHHHHhCCCccccee-----eccCC-ccHHHHHHHHHH
Confidence 44445578899999999997 999 665422 1233444578899997542111 12333 888888888766
Q ss_pred HH
Q 016111 351 RR 352 (395)
Q Consensus 351 ~~ 352 (395)
..
T Consensus 181 ~~ 182 (399)
T PLN03171 181 KD 182 (399)
T ss_pred HH
Confidence 44
No 212
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=63.53 E-value=24 Score=34.77 Aligned_cols=71 Identities=17% Similarity=0.099 Sum_probs=49.9
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCC--------CHHHHHHHHcCCCC--ccccceecCc-cchhHH
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMP--------GADYQLTKMLGLNP--SVKRVMLYFQ-GCYIGA 168 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p--------~~a~~l~~~Lgl~~--~~~~~~~i~~-~C~~~~ 168 (395)
.....+-.+|++++++++++++++||+|=+...|=++.| +....|++++|++- ++ |..|+-. |-.+-+
T Consensus 67 ~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DF-R~~D~a~GGqGAPL 145 (365)
T PRK09585 67 TALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADF-RRRDVAAGGQGAPL 145 (365)
T ss_pred HHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecC-hHHHHhcCCCCCCc
Confidence 346788899999999999999999998876666544444 46789999999873 22 3445533 333334
Q ss_pred HHH
Q 016111 169 TAI 171 (395)
Q Consensus 169 ~aL 171 (395)
..+
T Consensus 146 vp~ 148 (365)
T PRK09585 146 VPA 148 (365)
T ss_pred hHH
Confidence 443
No 213
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=62.43 E-value=34 Score=33.82 Aligned_cols=80 Identities=15% Similarity=0.067 Sum_probs=46.4
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC-----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG-----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRR 352 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~-----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~ 352 (395)
...++++++|+++|+++ +|| .++..+. ....-..+...+|++...... .+ |.++++-...|..+..
T Consensus 25 La~~A~~~AL~dAgl~~-~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~---~v----~~~c~s~~~al~~A~~ 96 (386)
T cd00751 25 LGAAVIKALLERAGLDP-EEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPAT---TV----NRVCGSGLQAVALAAQ 96 (386)
T ss_pred HHHHHHHHHHHhcCCCH-HHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchh---hh----ccccHHHHHHHHHHHH
Confidence 34568889999999997 888 5554321 123344577889987532222 12 3455555666665544
Q ss_pred hhhhcCCccCCCCCceEEEEE
Q 016111 353 KSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 353 ~~~~~g~i~~G~~~d~vll~~ 373 (395)
. |+.|. .|.||+++
T Consensus 97 ~------I~sG~-~~~vLv~g 110 (386)
T cd00751 97 S------IAAGE-ADVVVAGG 110 (386)
T ss_pred H------HHCCC-CCeEEEee
Confidence 3 34442 25666654
No 214
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=61.66 E-value=20 Score=35.48 Aligned_cols=44 Identities=16% Similarity=0.148 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
-...|++++|+++|++++|||++-+.-+. +.......+.||+.+
T Consensus 261 ~~~~a~~~a~~~agl~~~did~~e~~d~f----~~~~~~~~e~lg~~~ 304 (389)
T PRK07516 261 GPRRAWQRALAQAGVTLDDLSFVETHDCF----TIAELIEYEAMGLAP 304 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecCC----CHHHHHHHHHcCCCC
Confidence 34579999999999999999988764432 223345566677653
No 215
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=61.52 E-value=18 Score=36.10 Aligned_cols=72 Identities=10% Similarity=0.004 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFAE 179 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll~ 179 (395)
...|++++|+++|++++|||++=..-+ +....-.-.+.||+...+.. .+-.-.|++|....+.++.+|-.
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d~----fa~~~l~~~e~lg~~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~~ 372 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINEA----FAVVTMAAMKEHGLPHEKVNVNGGACALGHPIGASGARILVTLIGALRA 372 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhhH----HHHHHHHHHHHhCCCcccCCcCCChHHhcccHHHHHHHHHHHHHHHHHh
Confidence 467999999999999999998842111 11111223467887543200 11112356666677777777755
Q ss_pred cC
Q 016111 180 NN 181 (395)
Q Consensus 180 ~g 181 (395)
.+
T Consensus 373 ~~ 374 (397)
T PRK06954 373 RG 374 (397)
T ss_pred cC
Confidence 43
No 216
>PRK06158 thiolase; Provisional
Probab=61.11 E-value=26 Score=34.70 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=46.0
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC-ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG-GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~-~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
...++++++|+++|+++ +|| .++.... .......+.+.+|++... .. .-++++++....|..+...
T Consensus 31 L~~eA~~~Al~dAgl~~-~dID~iv~~~~~~~~~~~~la~~lGl~~~~-~~-------~~~~g~~s~~~al~~A~~~--- 98 (384)
T PRK06158 31 LLAQAAHRALADAGLTM-ADVDGLFTASPDDALWGLSVAEYLGIRPRF-VD-------GTMIGGSSFLAHLLPAALA--- 98 (384)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEecCCCCCcHHHHHHHcCCCCee-ec-------cccCccHHHHHHHHHHHHH---
Confidence 34568889999999997 888 4444322 111113578889996522 11 2355666777777666554
Q ss_pred cCCccCCCCCceEEEE
Q 016111 357 EGKVTTGEGLEWGVMF 372 (395)
Q Consensus 357 ~g~i~~G~~~d~vll~ 372 (395)
|+.|. .|.||++
T Consensus 99 ---I~sG~-~d~vLV~ 110 (384)
T PRK06158 99 ---LEAGL-CDVALIC 110 (384)
T ss_pred ---HHcCC-CCEEEEe
Confidence 44553 2555543
No 217
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.95 E-value=37 Score=32.47 Aligned_cols=77 Identities=13% Similarity=0.120 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcCC----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHH
Q 016111 273 ATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQPG----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFIL 347 (395)
Q Consensus 273 ~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq~----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L 347 (395)
.+.+.....++.+++|+..++.+ +|| .+++-.. -+.+--.+.++||+++.--.. .+--.|-.++++-+-.+
T Consensus 73 ie~a~~l~v~a~r~aL~~~~l~p-edId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rv---pv~glGCaaga~glara 148 (356)
T COG3424 73 IEEAVPLGVDALRRALDGSPLRP-EDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRV---PVWGLGCAAGAAGLARA 148 (356)
T ss_pred HHHHHHHHHHHHHHHhccCCCCH-HHCcEEEEEeeccccCCChhHHHHhhcCCCCcccee---eeecchhhhhhhHHHHH
Confidence 34556666788999999999997 999 5554432 234556688999998763222 14445666666666666
Q ss_pred HHHHHh
Q 016111 348 DEIRRK 353 (395)
Q Consensus 348 ~~~~~~ 353 (395)
.++.+.
T Consensus 149 ~~y~ra 154 (356)
T COG3424 149 RDYCRA 154 (356)
T ss_pred HHHHhh
Confidence 666664
No 218
>PRK08304 stage V sporulation protein AD; Validated
Probab=60.74 E-value=55 Score=31.72 Aligned_cols=79 Identities=15% Similarity=0.204 Sum_probs=45.1
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEE-cCCChHH-HHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhh
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIV-QPGGPAI-VNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKS 354 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~-hq~~~~~-~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~ 354 (395)
+...++++++|+++|+++ +|| +++. +..+..+ -..+++.||+|. +.-++.|++...-+.++..+=
T Consensus 58 eLa~eAa~~ALekAGI~~-~DID~lI~Gdll~Q~~sAs~vA~~LGIPa---------~dV~gACST~~~AL~lAa~lI-- 125 (337)
T PRK08304 58 KMMEDAIQQALQKANLKK-SDIDYLLAGDLLNQIISANFAARELGIPF---------LGLYGACSTMMESLALGSMLI-- 125 (337)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEECCCCCcchHHHHHHHhCCcE---------EEEeccCHHHHHHHHHHHHHH--
Confidence 345678899999999997 999 5543 3222222 234567788742 344565555555444443322
Q ss_pred hhcCCccCCCCCceEEEEEEc
Q 016111 355 AEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 355 ~~~g~i~~G~~~d~vll~~~G 375 (395)
+.|. .+++|+++..
T Consensus 126 ------~SG~-ad~VLVV~Ss 139 (337)
T PRK08304 126 ------DGGF-ADRVLAATSS 139 (337)
T ss_pred ------hcCC-CCEEEEEEcc
Confidence 2221 1677776643
No 219
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=60.64 E-value=42 Score=33.35 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS 153 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~ 153 (395)
....|++++|+++|++++|||.+=+..+ +....-...+.||+...
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d~----Fa~~~l~~~e~lG~~~~ 333 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNEA----FASVPLAWLKATGADPE 333 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEeccc----chHHHHHHHHHhCCCCC
Confidence 4457999999999999999998865442 23334466788898754
No 220
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.12 E-value=15 Score=36.83 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lg 149 (395)
.-..+|++++|+++|++|+|||+|-. ++.|+..-+.-...+...+|
T Consensus 288 ~~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 288 EGARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 34678999999999999999998753 34444322334556666666
No 221
>PRK08256 lipid-transfer protein; Provisional
Probab=59.02 E-value=35 Score=33.88 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS 153 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~ 153 (395)
...|++++++++|++++|||.+-+--+ ++...-...+.||+.+.
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d~----f~~~~l~~le~lg~~~~ 309 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHDC----FSANELLTYEALGLCPE 309 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeeccC----CcHHHHHHHHHcCCCCC
Confidence 457999999999999999998876443 23334555677777643
No 222
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=58.65 E-value=44 Score=33.15 Aligned_cols=41 Identities=29% Similarity=0.251 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
...|++++|+++|++|+|||.+=+.- .+....-...+.||+
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~d----aFa~~~l~~~e~lg~ 322 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELNE----AFAAQALPCLKDLGL 322 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEcc----ccHHHHHHHHHHcCC
Confidence 46789999999999999999876532 222333455677886
No 223
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=58.56 E-value=82 Score=30.46 Aligned_cols=43 Identities=16% Similarity=0.333 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEEcC-CChH-HHHHHHHHcCCC
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIVQP-GGPA-IVNQIEAKLGLK 321 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~hq-~~~~-~~~~i~~~lgi~ 321 (395)
+...++++++|+++|+++ +|| +++... .+.. .-..+++.||+|
T Consensus 52 eLa~eAa~~ALekAGL~~-~DID~IIvGdl~~Q~~~As~vA~~LGIP 97 (327)
T TIGR02845 52 KLMEDAVNLALKKANLKK-DDVDFFLAGDLLNQIITANFVARDLGIP 97 (327)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEeCCCCcccHHHHHHHHhCCC
Confidence 345678899999999997 999 554322 2212 223466888874
No 224
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=57.64 E-value=82 Score=31.08 Aligned_cols=83 Identities=19% Similarity=0.157 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC-----Cccccc-eecCccchhHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN-----PSVKRV-MLYFQGCYIGATAIRMAK 175 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~-----~~~~~~-~~i~~~C~~~~~aL~~A~ 175 (395)
-..-...|+++.+++.|++++|.|.++|.+ ..|.....++..||.+ +..... ..-|..|++.+.+| |.
T Consensus 207 Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as 280 (377)
T COG3425 207 YFKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--AS 280 (377)
T ss_pred HHHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HH
Confidence 455667899999999999999999999865 3455667777777766 221101 12355777777665 33
Q ss_pred HHHHcC-CCCeEEEEE
Q 016111 176 DFAENN-PGARVLVVC 190 (395)
Q Consensus 176 ~ll~~g-~~~~vLvv~ 190 (395)
-|=.+. +.+++|+++
T Consensus 281 ~L~~a~~~G~rIl~~S 296 (377)
T COG3425 281 LLDNAKLPGDRILLFS 296 (377)
T ss_pred HHhhcCCCCCEEEEEe
Confidence 333334 456777654
No 225
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=57.50 E-value=31 Score=34.28 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=45.8
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEEc---C-C-ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIVQ---P-G-GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~h---q-~-~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
+...++++++|+++|+++ +|| .++.- | . +..+-+.+...+|++......+ +. .+++|-..++..+.
T Consensus 28 ~L~~~a~~~al~dagi~~-~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~---v~----~~caSg~~av~~Aa 99 (388)
T PRK06366 28 QLGGAAIKAVIDDAKLDP-ALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYT---VN----VVCASGMLAVESAA 99 (388)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCccee---ee----chhhHHHHHHHHHH
Confidence 344578889999999997 888 54432 1 1 2223456788899985433322 33 23444455555554
Q ss_pred HhhhhcCCccCCCCCceEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~ 373 (395)
.. |..|. .|.||..+
T Consensus 100 ~~------I~sG~-~d~vla~G 114 (388)
T PRK06366 100 RE------IMLGE-RDLVIAGG 114 (388)
T ss_pred HH------HhcCC-CCEEEEEe
Confidence 43 44553 15555433
No 226
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=57.35 E-value=25 Score=35.03 Aligned_cols=47 Identities=13% Similarity=0.016 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
.=..+|.+++|+++|+++++||+|.. +|.|+..-+.....|.+-+|-
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~ 317 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGP 317 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCC
Confidence 34568899999999999999998763 333343334445566766764
No 227
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=56.69 E-value=37 Score=33.60 Aligned_cols=70 Identities=13% Similarity=0.066 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCcccc------ceecCccchhHHHHHHHHHHHHHc
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKR------VMLYFQGCYIGATAIRMAKDFAEN 180 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~------~~~i~~~C~~~~~aL~~A~~ll~~ 180 (395)
..|++++|+++|+.++|||.+=+.- .+........+.||+...+.- .+-.-.+++|....++++.+|-..
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~~ 358 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADPAKVNPNGGAIALGHPLGATGAKLMTTLLHELERT 358 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCchhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHhc
Confidence 5799999999999999999884322 222333455777887644200 011112455555666666666553
No 228
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=56.67 E-value=31 Score=34.76 Aligned_cols=81 Identities=16% Similarity=0.233 Sum_probs=47.7
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCCC-----hHHH-HHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPGG-----PAIV-NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~~-----~~~~-~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
...++++++|+++|+++ +|| .++..+.+ ..+. ..+...+|++. +... .+ +.+++|...++.++.
T Consensus 40 L~~eA~~~Al~dagl~~-~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~---~v----~~~~aSg~~ai~~A~ 110 (430)
T PRK06365 40 RVKKAFDYAMNDAGLTL-ADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSK---RI----EGGGATGGLAFQAGY 110 (430)
T ss_pred HHHHHHHHHHHHcCCCH-HHcCEEEEecccccccccchhhHHHHHhcCCCC-CceE---EE----eCCcHHHHHHHHHHH
Confidence 34568889999999997 888 55444322 1122 23578999976 3222 12 235555566666665
Q ss_pred HhhhhcCCccCCCCCceEEEEEEc
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
.. |+.|. .|.||+.++-
T Consensus 111 ~~------I~sG~-~~~vLv~G~e 127 (430)
T PRK06365 111 EE------IASGR-MDCVAVYGFE 127 (430)
T ss_pred HH------HHcCC-CCEEEEEEee
Confidence 54 55553 2667766654
No 229
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=56.64 E-value=27 Score=34.11 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
..-..+|++++|+++|++++|||+|-. ++.|+..-+.-..-|.+-+|-
T Consensus 205 ~~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 205 GDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 445678999999999999999998653 333333334456667777763
No 230
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=56.11 E-value=47 Score=32.93 Aligned_cols=78 Identities=19% Similarity=0.119 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCc---c-cc-----ceecCccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPS---V-KR-----VMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~---~-~~-----~~~i~~~C~~~~~aL~~A~~ 176 (395)
...|++++|+++|++++|||.+=+.-+ +....-...+.||+.+. + .+ .+..-.||+|......++.+
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d~----F~~~~l~~~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~ 359 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNEA----FAAQSLPCLKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNL 359 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeccc----chHHHHHHHHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHH
Confidence 467889999999999999998875432 22334455677887321 1 00 11112366676666666666
Q ss_pred HHHcCCCCeEEE
Q 016111 177 FAENNPGARVLV 188 (395)
Q Consensus 177 ll~~g~~~~vLv 188 (395)
+-+.+ .++.|+
T Consensus 360 L~~~~-~~~gl~ 370 (387)
T PRK08947 360 MERKD-AQFGLA 370 (387)
T ss_pred HHhcC-CCEEEE
Confidence 65432 344443
No 231
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=55.22 E-value=23 Score=35.08 Aligned_cols=46 Identities=13% Similarity=0.064 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lg 149 (395)
.-..++++++|+++|++++|||+|.. ++.|+..-+.....+...++
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 45578899999999999999998764 33333333334444555444
No 232
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=55.19 E-value=46 Score=32.91 Aligned_cols=49 Identities=14% Similarity=-0.010 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~ 151 (395)
..+...++.++.|+++|++++|||.+++....+ ..... ..++...++++
T Consensus 203 y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~-~~~~l~~~~~~ 252 (379)
T TIGR01835 203 YLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKA-LRHILKKNYED 252 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHH-HHHHHhhcccc
Confidence 344567888999999999999999998754222 11111 23455666655
No 233
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.78 E-value=9.8 Score=36.96 Aligned_cols=47 Identities=15% Similarity=0.137 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEE-EEecCCCCCCCHHHHHHHHcCC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLI-FCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi-~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
.=+..|.++||+++|+.|+|||+|= ++|+||.---..+..|.+-++-
T Consensus 301 ~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 4567789999999999999999985 4666662211234455555553
No 234
>PRK00768 nadE NAD synthetase; Reviewed
Probab=52.27 E-value=2.1e+02 Score=26.94 Aligned_cols=31 Identities=3% Similarity=-0.034 Sum_probs=20.6
Q ss_pred CHHHHHHHHcCCCCccccceecCccchhHHHHH
Q 016111 139 GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAI 171 (395)
Q Consensus 139 ~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL 171 (395)
..+..+++.||+.... ..++.....++...+
T Consensus 90 ~da~~la~~lgi~~~~--~i~I~~~~~~~~~~l 120 (268)
T PRK00768 90 DDAQDALAFIQPDRVL--TVNIKPAVDASVAAL 120 (268)
T ss_pred HHHHHHHHhcCCCeeE--EEECHHHHHHHHHHH
Confidence 4678899999984322 566666666665544
No 235
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=52.22 E-value=33 Score=33.95 Aligned_cols=80 Identities=11% Similarity=0.133 Sum_probs=48.1
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCCCh-----HHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPGGP-----AIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRK 353 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~~~-----~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~ 353 (395)
..++++++|+++|+++ +|| .++..+... ..-..+.+.+|++... ..+ + |.++++-...|..+...
T Consensus 25 a~~A~~~AL~dAgi~~-~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~-~~~---v----~~~casg~~al~~A~~~ 95 (385)
T PRK12578 25 AWESIKEALNDAGVSQ-TDIELVVVGSTAYRGIELYPAPIVAEYSGLTGKV-PLR---V----EAMCATGLAASLTAYTA 95 (385)
T ss_pred HHHHHHHHHHHcCCCH-HHCCEEEEEecccccccCChHHHHHHHhCCCCCC-eeE---E----eccCHHHHHHHHHHHHH
Confidence 3468889999999997 888 554433211 1224577889987632 222 3 34566666666655553
Q ss_pred hhhcCCccCCCCCceEEEEEEc
Q 016111 354 SAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 354 ~~~~g~i~~G~~~d~vll~~~G 375 (395)
|+.|. .+.+|+++..
T Consensus 96 ------I~sG~-~~~vLvvg~e 110 (385)
T PRK12578 96 ------VASGL-VDMAIAVGVD 110 (385)
T ss_pred ------HHCCC-CCEEEEEEEe
Confidence 44442 2677777655
No 236
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.23 E-value=30 Score=34.79 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lg 149 (395)
..++++++|+++|++++|||+|... +.|+...+.-..-|...+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999998753 3333322333344455555
No 237
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=50.86 E-value=30 Score=34.32 Aligned_cols=76 Identities=9% Similarity=0.010 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCCCCccc--cceecCccchhHHHHHHHHHHHHHcC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGLNPSVK--RVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl~~~~~--~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
..++++++|+++|++++|||+|.. ++.|+..-+.-...|.+.+|-+..+. -...-+..+++++..+..+...|+.|
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 358999999999999999998653 33333322334455666665321110 01112334444444444444445555
No 238
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=50.46 E-value=20 Score=35.19 Aligned_cols=44 Identities=20% Similarity=0.110 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
-...|++++|+++|++++|||++=+-.+. +...-...+.||+..
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d~F----~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYDCF----TIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCcC----hHHHHHHHHHcCCCC
Confidence 34579999999999999999988765542 334455667777654
No 239
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=49.50 E-value=1.3e+02 Score=31.71 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=39.0
Q ss_pred HhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 100 REVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 100 ~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
+...+=..+.++++|+++|+++++||.|+++..+. .+|..-..|.+.+|..
T Consensus 289 ~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 289 QPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGST-RMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33444456778999999999999999998876443 4677888888888854
No 240
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=49.50 E-value=55 Score=32.55 Aligned_cols=82 Identities=13% Similarity=0.134 Sum_probs=47.1
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEEc-CCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhh
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIVQ-PGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSA 355 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~h-q~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~ 355 (395)
+.+.++++++|+++|++. +|| .++.. .........+.+.+|+.... .. ..+.++++....+..+...
T Consensus 27 ~L~~eA~~~Al~DAgl~~-~dID~~~~~~~~~~~~~~~~~~~lGl~~~~-~~-------~v~~gg~s~~~a~~~A~~~-- 95 (388)
T PRK08142 27 QLHAEVAKGALADAGLSL-ADVDGYFCAGDAPGLGPASMVDYLGLKLRH-VD-------STETGGSSYLAHVGHAAQA-- 95 (388)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEcCCCCCccHHHHHHhCCCCCee-ec-------cccCCcHHHHHHHHHHHHH--
Confidence 344578888999999996 888 44431 11111112478899995422 21 1234556655556665554
Q ss_pred hcCCccCCCCCceEEEEEEc
Q 016111 356 EEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 356 ~~g~i~~G~~~d~vll~~~G 375 (395)
|+.|. .|.||+++..
T Consensus 96 ----I~sG~-~d~vLvvg~e 110 (388)
T PRK08142 96 ----IAAGK-CSVALITLAG 110 (388)
T ss_pred ----HHcCC-CCEEEEEeee
Confidence 45553 2667766654
No 241
>PRK07937 lipid-transfer protein; Provisional
Probab=49.30 E-value=85 Score=30.74 Aligned_cols=76 Identities=13% Similarity=0.035 Sum_probs=42.6
Q ss_pred HHHHHHHHH-hCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecC--------ccchhHHHHHHHHHHHH
Q 016111 108 EAATKAIKE-WGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYF--------QGCYIGATAIRMAKDFA 178 (395)
Q Consensus 108 ~Aa~~aL~~-ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~--------~~C~~~~~aL~~A~~ll 178 (395)
.++++++++ +|++++|||.+=+--+ ++.......+.||+....+ ...+ .+|+|....++.+.++.
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~D~----F~~~~l~~~e~lGl~g~~p--vN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELHAP----FTHQELILREALGLGDKTK--VNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEeCC----ChHHHHHHHHHcCCCCCCC--cCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 344556666 5999999998866443 2334455678888854321 1111 24444444445555554
Q ss_pred HcCCCCeEEEEE
Q 016111 179 ENNPGARVLVVC 190 (395)
Q Consensus 179 ~~g~~~~vLvv~ 190 (395)
. ...+++|+.+
T Consensus 324 g-~~a~~~l~~~ 334 (352)
T PRK07937 324 D-GSARRALAHA 334 (352)
T ss_pred c-cCCCEEEEec
Confidence 3 3456666654
No 242
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=49.21 E-value=47 Score=33.19 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=45.7
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC------ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG------GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~------~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
...++++++|+++|+++ +|| .+++-+. +..+.+.+...+|+|.+.-..+ +.+ .++|-..++..+.
T Consensus 29 L~~~a~~~al~~agi~~-~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~t---V~~----~CaSG~~Ai~~A~ 100 (401)
T PRK08131 29 LAATVIRRLLEKSGFPG-DDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQT---VNR----LCASGLAAVIDAA 100 (401)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceee---eec----hhhhHHHHHHHHH
Confidence 34578889999999986 878 4433221 2335556778899886543332 333 3444444444444
Q ss_pred HhhhhcCCccCCCCCceEEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
.. |+.|. .|.++..++
T Consensus 101 ~~------I~sG~-~dvvlagG~ 116 (401)
T PRK08131 101 RA------ITCGE-GDLYLAGGV 116 (401)
T ss_pred HH------HHCCC-CCEEEEEEe
Confidence 43 44452 155555444
No 243
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=48.76 E-value=45 Score=33.25 Aligned_cols=47 Identities=11% Similarity=0.066 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcCC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lgl 150 (395)
....++++++|+++|++++|||+|... +.++.........+...+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 445679999999999999999987653 43332222334455555553
No 244
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=48.16 E-value=45 Score=33.47 Aligned_cols=47 Identities=9% Similarity=0.029 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHH-hCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 104 KLGEEAATKAIKE-WGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 104 ~la~~Aa~~aL~~-ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
.-..+|++++|++ +|++++|||+|-. ++.++...+....-+...+|-
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 3456899999999 9999999998864 333333222333445666653
No 245
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=47.26 E-value=41 Score=33.96 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEEE-ecCCCCCCCHHHHHHHHcC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIFC-SLVGVDMPGADYQLTKMLG 149 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~~-s~t~~~~p~~a~~l~~~Lg 149 (395)
+-..+|++++|+++|++++|||+|-.. +.|+..-+.....+...+|
T Consensus 299 ~~~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 299 RGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 345678999999999999999987542 3333222233344455444
No 246
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=46.69 E-value=51 Score=32.75 Aligned_cols=81 Identities=15% Similarity=0.058 Sum_probs=45.0
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEE-cC---C-ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIV-QP---G-GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~-hq---~-~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
+...++++++|+++|+++ +|| .++. +- . +..+.+.+...+|++...... ++. .+++|-..++..+.
T Consensus 27 ~L~~~a~~~al~dAgl~~-~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~---~v~----~~caSg~~av~~Aa 98 (394)
T PLN02644 27 ELGSIAIQAALERAGVDP-ALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICT---TVN----KVCASGMKAVMLAA 98 (394)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceE---EEe----ccchHHHHHHHHHH
Confidence 334578889999999996 888 4443 31 1 223445678889996543222 132 23444455555544
Q ss_pred HhhhhcCCccCCCCCceEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFG 373 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~ 373 (395)
.. |..|. .|.||..+
T Consensus 99 ~~------I~sG~-~d~vlv~G 113 (394)
T PLN02644 99 QS------IQLGI-NDVVVAGG 113 (394)
T ss_pred HH------HHcCC-CCEEEEEe
Confidence 43 44453 15565433
No 247
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=46.50 E-value=33 Score=33.42 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=29.9
Q ss_pred HHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEec
Q 016111 99 VREVPKLGEEAATKAIKEWGQSKSQITHLIFCSL 132 (395)
Q Consensus 99 ~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~ 132 (395)
.++.++|......+++++++++.+|+|.|+=+|.
T Consensus 62 resV~elV~dtl~e~~k~A~l~i~DL~FVVRSTG 95 (445)
T TIGR03285 62 RESVAELVKDTLKESLKKAGLDIDDLDFVVRSTG 95 (445)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChhhccEEEeccc
Confidence 4568999999999999999999999999986554
No 248
>PRK06059 lipid-transfer protein; Provisional
Probab=46.14 E-value=67 Score=31.93 Aligned_cols=81 Identities=15% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcC------CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQP------GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq------~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
...++++++|+++|+++ +|| .++..+ .+...-..+++.+|+..-... . =|.++++-...|..+.
T Consensus 26 La~~A~~~Al~dAgl~~-~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~~~~~------~--v~~~Casg~~al~~A~ 96 (399)
T PRK06059 26 YGVVAARAALADAGLDW-RDVQLVVGADTIRNGYPGFVAGATFAQALGWNGAPVS------S--SYAACASGSQALQSAR 96 (399)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEEeccCCccCCccHHHHHHHHhCCCCCcee------c--ccchhHHHHHHHHHHH
Confidence 34567889999999997 888 554321 111122567888998542221 1 1334555555565554
Q ss_pred HhhhhcCCccCCCCCceEEEEEEc
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
.. |+.|. .|.+|+++.-
T Consensus 97 ~~------I~sG~-~~~vLvvg~e 113 (399)
T PRK06059 97 AQ------ILAGL-CDVALVVGAD 113 (399)
T ss_pred HH------HHCCC-CCEEEEEEEc
Confidence 43 34442 2566666544
No 249
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=45.57 E-value=1.5e+02 Score=31.41 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
..+=..+.++++|+++|+.+++||.|++...+. .+|..-..|.+.+|..
T Consensus 307 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~fg~~ 355 (616)
T PRK05183 307 LVKRTLLACRRALRDAGVEADEVKEVVMVGGST-RVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCEEEEECCcc-cChHHHHHHHHHhccC
Confidence 334445667899999999999999999876543 4677788888888854
No 250
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=45.26 E-value=52 Score=32.62 Aligned_cols=27 Identities=15% Similarity=0.036 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEE
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIF 129 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~ 129 (395)
..-..++++++|+++|++++|||+|..
T Consensus 278 ~~~~~~a~~~al~~Agi~~~did~i~~ 304 (421)
T cd00833 278 GEAQAALIRRAYARAGVDPSDIDYVEA 304 (421)
T ss_pred HHHHHHHHHHHHHHhCCCHHHCcEEEe
Confidence 345568999999999999999998864
No 251
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=43.34 E-value=29 Score=34.57 Aligned_cols=43 Identities=14% Similarity=0.194 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
...|++++|+++|++++|||.+-+.-+ +....-...+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~D~----fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVHDC----FTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeeecc----chHHHHHHHHHcCCCC
Confidence 467999999999999999998776443 2333455567777654
No 252
>PRK07855 lipid-transfer protein; Provisional
Probab=42.60 E-value=82 Score=31.22 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHHHhhhh
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIRRKSAE 356 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~~~~~~ 356 (395)
+.+.++++++|+++|++. +|| .++........-..+.+.+|+..-+... .+.. ++++.-..|..+...
T Consensus 26 ~L~~eA~~~Al~DAgl~~-~dID~~~~~~~~~~~~~~l~~~lGl~~~~~~~---~v~~----gg~sg~~~~~~A~~~--- 94 (386)
T PRK07855 26 RLACEAVLAALDDAGLAP-SDVDGLVTFTMDTNPEIAVARALGIGELKFFS---RIHY----GGGAACATVQQAAMA--- 94 (386)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEecCccccHHHHHHHCCCCCCccee---eecC----CcHHHHHHHHHHHHH---
Confidence 344577888999999986 888 4433111111113477899986522211 1222 333333445555543
Q ss_pred cCCccCCCCCceEEEEEE
Q 016111 357 EGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 357 ~g~i~~G~~~d~vll~~~ 374 (395)
|+.|. .|.||+++.
T Consensus 95 ---I~sG~-~d~vLv~g~ 108 (386)
T PRK07855 95 ---VATGV-ADVVVCYRA 108 (386)
T ss_pred ---HHCCC-CCEEEEEee
Confidence 44553 377777665
No 253
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=42.01 E-value=74 Score=31.68 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EE-EEcCC----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FW-IVQPG----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~-i~hq~----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
+...++++++|+++|+++ +|| .+ +.+.. ....-..+.+.+|++. +... .+ +.++++-..++..+.
T Consensus 29 ~L~~ea~~~AL~dagl~~-~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~-~~~~---~v----~~~c~sg~~ai~~A~ 99 (398)
T PRK06157 29 DLMVEAFLEALADAGIEP-KDIDAAWFGTHYDEIGSGKSGTPLSRALRLPN-IPVT---RV----ENFCATGSEAFRGAV 99 (398)
T ss_pred HHHHHHHHHHHHHcCCCH-HHCCEEEEEeccccccccchhHHHHHHcCCCC-CCEE---EE----ecccHHHHHHHHHHH
Confidence 344578899999999997 888 44 33311 1112245777899974 3221 12 334555555566555
Q ss_pred HhhhhcCCccCCCCCceEEEEEEc
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
.. |..|. .|.+|++++.
T Consensus 100 ~~------I~sG~-~d~vlv~G~e 116 (398)
T PRK06157 100 YA------VASGA-YDIALALGVE 116 (398)
T ss_pred HH------HHCCC-CCEEEEEEEe
Confidence 54 44553 2667766665
No 254
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=41.91 E-value=81 Score=31.76 Aligned_cols=45 Identities=13% Similarity=0.123 Sum_probs=30.0
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC---C--hHHHHHHHHHcCCCccc
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG---G--PAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~---~--~~~~~~i~~~lgi~~e~ 324 (395)
...++++++|+++|+.+ ++| .+++-+. + ..+.+.+...+|++...
T Consensus 32 L~~~a~~~al~~agl~~-~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~ 82 (428)
T PRK08963 32 LGKMVVGELLARSEIDP-ELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT 82 (428)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCC
Confidence 34578889999999997 778 4443221 1 33455677888998544
No 255
>PRK14878 UGMP family protein; Provisional
Probab=41.31 E-value=56 Score=31.53 Aligned_cols=46 Identities=20% Similarity=0.121 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCC-----CCHHHHHHHHcCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-----PGADYQLTKMLGLN 151 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~-----p~~a~~l~~~Lgl~ 151 (395)
...+.+++|+++|++++|||.|.++..-+... -..|..++..++.+
T Consensus 48 l~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~p 98 (323)
T PRK14878 48 APELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNKP 98 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCCC
Confidence 33789999999999999999998765433221 13466777777765
No 256
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=40.21 E-value=90 Score=31.02 Aligned_cols=82 Identities=18% Similarity=0.081 Sum_probs=47.3
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC------ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG------GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~------~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
...++++++|+++|+++ ++| .++.-+. +..+-+.+...+|++.+.... .- |..++|-..++..+.
T Consensus 30 L~~~A~~~aL~~agi~~-~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~-----~V--~~aCaSg~~Al~~A~ 101 (392)
T PRK07108 30 LGGHVVQHAVERAKLDP-AEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGM-----TV--NRFCSSGLQTIALAA 101 (392)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCcee-----ee--cchhhHHHHHHHHHH
Confidence 34568889999999997 877 4443221 123556777788987543222 11 344555555555554
Q ss_pred HhhhhcCCccCCCCCceEEEEEEc
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
.. |+.|. .|.+|..++-
T Consensus 102 ~~------I~sG~-~d~vlagGvE 118 (392)
T PRK07108 102 QR------VIAGE-GDVFVAGGVE 118 (392)
T ss_pred HH------HHCCC-CCEEEEEEEe
Confidence 43 34442 2666666654
No 257
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=39.70 E-value=37 Score=31.63 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLV 133 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t 133 (395)
.-.||..+|++++.+++|+.|+||+.|-+-.|.
T Consensus 269 ~gfdm~~~aa~~l~aksgltpndvqvielhdcf 301 (408)
T KOG1406|consen 269 AGFDMTRLAAKRLFAKSGLTPNDVQVIELHDCF 301 (408)
T ss_pred hcchHHHHHHHHHHHHcCCCcccceEEEeeccc
Confidence 346899999999999999999999988776553
No 258
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=38.96 E-value=52 Score=32.06 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCC-----CHHHHHHHHcCCC
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMP-----GADYQLTKMLGLN 151 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p-----~~a~~l~~~Lgl~ 151 (395)
.+..++||+++|+.|.|+|+|-+....+...+ +.|..++.+|..+
T Consensus 87 ~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 87 PRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 35689999999999999999886544334322 3556667666554
No 259
>PRK13410 molecular chaperone DnaK; Provisional
Probab=38.20 E-value=1.4e+02 Score=32.12 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=40.0
Q ss_pred HHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 98 LVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 98 ~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
..+...+-..+.++++|+++|+++++||.|+++..+. -+|..-..|...+|..
T Consensus 303 l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGss-RiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 303 LCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGST-RMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcc-ccHHHHHHHHHHcCCC
Confidence 3334455566678999999999999999988876543 4677778888888854
No 260
>PRK09604 UGMP family protein; Validated
Probab=37.79 E-value=78 Score=30.67 Aligned_cols=50 Identities=18% Similarity=0.046 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC----CCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM----PGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~----p~~a~~l~~~Lgl~ 151 (395)
-.+.....++++|+++|++++|||.|.++..-+ +.. -..|..++..++++
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~ip 105 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNKP 105 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCCC
Confidence 356667789999999999999999999866543 211 13456666666654
No 261
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=37.76 E-value=93 Score=30.98 Aligned_cols=46 Identities=11% Similarity=0.068 Sum_probs=31.2
Q ss_pred HHHHHHHhhccCCCCCCCce-EEEEcCC-----ChHHHHHHHHHcCCCccchh
Q 016111 280 IEKCLDEAFSPFGIKDWNSL-FWIVQPG-----GPAIVNQIEAKLGLKQQKLS 326 (395)
Q Consensus 280 ~~~~i~~~L~~~gl~~~~di-~~i~hq~-----~~~~~~~i~~~lgi~~e~~~ 326 (395)
...+++++|+++|+++ ++| .+++-+. +..+.+.+...+|++.+.-.
T Consensus 31 ~~~a~~~al~~agi~~-~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~ 82 (392)
T PRK06633 31 AAHLIKDILQNSKIDP-ALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPG 82 (392)
T ss_pred HHHHHHHHHHHcCCCH-HHcCEEEEEecCccccccHHHHHHHHHCCCCCCccc
Confidence 4568889999999996 888 4444222 23455667788999865433
No 262
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=36.54 E-value=94 Score=30.23 Aligned_cols=79 Identities=18% Similarity=0.051 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCC------CHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMP------GADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p------~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
-.....+++|+++|++.+|||+|-++...+. .+ ..|..++-.++.+ ..- -+.|-|=+.+-. +
T Consensus 53 ~i~~li~~al~eA~~~~~dID~IA~T~gPGL-~gaL~VG~~~Ak~LA~a~~kP-----li~-VnH~~gHi~a~~-----l 120 (342)
T COG0533 53 NIPPLIEEALAEAGVSLEDIDAIAVTAGPGL-GGALLVGATAAKALALALNKP-----LIP-VNHLEGHIEAAR-----L 120 (342)
T ss_pred HHHHHHHHHHHHcCCCcccCCEEEEecCCCc-hhHHHHHHHHHHHHHHHhCCC-----Eee-cchHHHHHHHHH-----h
Confidence 3445689999999999999999987544322 22 2344555555544 222 335555444433 3
Q ss_pred HcC-C-CCeEEEEEeeccc
Q 016111 179 ENN-P-GARVLVVCSDLSL 195 (395)
Q Consensus 179 ~~g-~-~~~vLvv~~d~~s 195 (395)
..+ . .--+|+|++-...
T Consensus 121 ~~~~~~p~v~LlVSGGHTq 139 (342)
T COG0533 121 ETGLAFPPVALLVSGGHTQ 139 (342)
T ss_pred ccCCCCCcEEEEEecCceE
Confidence 333 3 3345666665543
No 263
>CHL00094 dnaK heat shock protein 70
Probab=35.32 E-value=1.6e+02 Score=31.32 Aligned_cols=58 Identities=17% Similarity=0.252 Sum_probs=42.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 93 SRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 93 ~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
...+...+...+-....++++|+++++++++||.|++...+ ..+|..-..+.+.+|..
T Consensus 298 ~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 298 AKFEELCSDLINRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 33333333444555666889999999999999999987654 35688888899988854
No 264
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=35.23 E-value=1.9e+02 Score=30.94 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=38.6
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
...+=....++++|+++|+++++||.|++...+. .+|..-..|.+.+|..
T Consensus 331 ~l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGss-riP~V~~~l~~~fg~~ 380 (657)
T PTZ00186 331 RLIERSIAPCKQCMKDAGVELKEINDVVLVGGMT-RMPKVVEEVKKFFQKD 380 (657)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcc-cChHHHHHHHHHhCCC
Confidence 3444455678899999999999999998876442 5688888899988854
No 265
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=33.64 E-value=36 Score=31.94 Aligned_cols=49 Identities=18% Similarity=0.032 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCC-----CCHHHHHHHHcCCC
Q 016111 103 PKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDM-----PGADYQLTKMLGLN 151 (395)
Q Consensus 103 ~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~-----p~~a~~l~~~Lgl~ 151 (395)
++.....++++|++++++++|||.|.++..-+.+. -+.|.-++..++++
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~P 83 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIP 83 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCC
Confidence 45556789999999999999999999877644211 13344455555544
No 266
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=33.53 E-value=76 Score=30.33 Aligned_cols=50 Identities=16% Similarity=0.022 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC----CCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM----PGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~----p~~a~~l~~~Lgl~ 151 (395)
-.+.....++++|+++|++++|||.|.++...+ +.. -..|..++..++++
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p 102 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKP 102 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCC
Confidence 345566778999999999999999999876544 211 13455556666554
No 267
>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues. The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=33.18 E-value=80 Score=30.99 Aligned_cols=34 Identities=9% Similarity=0.045 Sum_probs=29.9
Q ss_pred HHhHHHHHHHHHHHHHHHhCCCCC-CcCEEEEEec
Q 016111 99 VREVPKLGEEAATKAIKEWGQSKS-QITHLIFCSL 132 (395)
Q Consensus 99 ~~~~~~la~~Aa~~aL~~ag~~~~-~Id~vi~~s~ 132 (395)
.++.++|..+...+++++++++.+ |+|.|+=+|.
T Consensus 64 rEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTG 98 (448)
T PF09887_consen 64 RESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTG 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccccceEEEeecc
Confidence 457899999999999999999988 9999986654
No 268
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=32.39 E-value=58 Score=32.08 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCC----------CHHHHHHHHcCCCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMP----------GADYQLTKMLGLNP 152 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p----------~~a~~l~~~Lgl~~ 152 (395)
...++-.+|+++.|+++++++++||+|=....|-++.| +....|+++.|++-
T Consensus 65 ~lg~~~a~av~~~l~~~~i~~~~I~~IgsHGQTv~H~P~~~~~~TlQiG~~~~iA~~tgi~v 126 (364)
T PF03702_consen 65 ELGELFADAVNQFLKKNGISPSDIDLIGSHGQTVFHRPEGQHPFTLQIGDPAVIAERTGITV 126 (364)
T ss_dssp HHHHHHHHHHHHHHHHCT--GGGEEEEEE--EEEEEECCCTTTEEEEES-HHHHHHHHSS-E
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccEEEeCCcceecCcCCCCCceEecCCHHHHHHHHCcCE
Confidence 46788899999999999999999998866555533323 46789999999873
No 269
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=32.38 E-value=74 Score=28.30 Aligned_cols=33 Identities=12% Similarity=0.035 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG 134 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~ 134 (395)
-++.....++++|+++|++.+|||.|.++..-+
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPG 65 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPG 65 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC
Confidence 456666789999999999999999999877654
No 270
>PLN03184 chloroplast Hsp70; Provisional
Probab=32.13 E-value=1.8e+02 Score=31.18 Aligned_cols=56 Identities=14% Similarity=0.195 Sum_probs=41.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
.+...+...+-..+.++++|+++++++++||.|+++..+. .+|..-..|...+|..
T Consensus 337 fe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGss-riP~V~~~i~~~fg~~ 392 (673)
T PLN03184 337 FEELCSDLLDRCKTPVENALRDAKLSFKDIDEVILVGGST-RIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhHccEEEEECCcc-ccHHHHHHHHHHhCCC
Confidence 3333334445566678999999999999999999876543 4687888888888854
No 271
>PRK13411 molecular chaperone DnaK; Provisional
Probab=31.15 E-value=1.9e+02 Score=30.86 Aligned_cols=49 Identities=18% Similarity=0.295 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
...+=..+.++++|+++++.+++||.|++...+. .+|..-..|.+.+|-
T Consensus 305 ~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~f~~ 353 (653)
T PRK13411 305 DLVEATIEPMQQALKDAGLKPEDIDRVILVGGST-RIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCC-CcchHHHHHHHHcCC
Confidence 3344456678899999999999999988876443 467788889888874
No 272
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=30.58 E-value=1.5e+02 Score=24.12 Aligned_cols=43 Identities=16% Similarity=0.236 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHc-CCCCcc
Q 016111 109 AATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKML-GLNPSV 154 (395)
Q Consensus 109 Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~L-gl~~~~ 154 (395)
-..+.+++.+++++||--|+|+.+.- -.+|+ ..++++ |+...+
T Consensus 25 Ll~~ii~~N~l~~edivSv~FT~T~DL~a~FPA---~aaR~~~Gw~~Vp 70 (117)
T TIGR01796 25 LLTELMERNELTPEDLISVIFTVTEDLHADFPA---AAARGLPGWTDVP 70 (117)
T ss_pred HHHHHHHHcCCCHHHEEEEEEEecCcccccChH---HHHHhccCCCCcc
Confidence 34566788999999999988854433 24664 445566 888764
No 273
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=30.39 E-value=1.5e+02 Score=29.52 Aligned_cols=81 Identities=10% Similarity=0.016 Sum_probs=44.7
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcC-CCh----H-HHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQP-GGP----A-IVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq-~~~----~-~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
...++++++|+++|+++ +|| .++... .+. . .-..+.+.+|+.. +... +. +.++++-..+|..+.
T Consensus 32 L~~~A~~~Al~dagl~~-~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-~~~~------~V-~~~gasG~~al~~A~ 102 (392)
T PRK06065 32 LAWEAASKALDEAGLEL-KDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-KPVS------RV-YVGGATGVMTAIAGW 102 (392)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEeccCCcccccccHHHHHHHHcCCCC-CCeE------EE-ecCchhHHHHHHHHH
Confidence 34568889999999997 888 444432 111 1 2334667787653 2111 12 223444445665554
Q ss_pred HhhhhcCCccCCCCCceEEEEEEc
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGIG 375 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~G 375 (395)
.. |+.|. .|.||++++.
T Consensus 103 ~~------I~sG~-ad~vLVvg~e 119 (392)
T PRK06065 103 YH------VASGL-CQKVLAVAEE 119 (392)
T ss_pred HH------HhCCC-CCEEEEEEee
Confidence 43 44452 2677777654
No 274
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=28.64 E-value=2.5e+02 Score=29.81 Aligned_cols=54 Identities=22% Similarity=0.302 Sum_probs=40.5
Q ss_pred HHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 97 ILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 97 ~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
...+...+=..+.++++|+++|+.+.+||.|++...+. .+|..-..|.+.+|..
T Consensus 300 ~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGss-riP~v~~~l~~~fg~~ 353 (627)
T PRK00290 300 ELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGST-RMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcC-CChHHHHHHHHHhCCC
Confidence 33334445556678999999999999999999876543 4677888888888754
No 275
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=28.43 E-value=2.5e+02 Score=29.52 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
...=..+..+++|.++++++.+|+.|+....+ ..+|..-..+.+.+| +. + .-.++..++-..-|...|..+-
T Consensus 288 ll~r~~~~~~~al~~a~l~~~~I~~VilvGGs-triP~V~~~v~~~f~-~~-~--~~~inpdeava~GAa~qa~~l~ 359 (579)
T COG0443 288 LLERTIEPVEQALKDAGLEKSDIDLVILVGGS-TRIPAVQELVKEFFG-KE-P--EKSINPDEAVALGAAIQAAVLS 359 (579)
T ss_pred HHHHHHHHHHHHHHHcCCChhhCceEEEccce-eccHHHHHHHHHHhC-cc-c--cccCCccHHHHHHHHHHHHhhc
Confidence 33444556779999999999999999986644 356878889999999 32 2 4557888887777777666553
No 276
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=28.37 E-value=2.5e+02 Score=30.00 Aligned_cols=45 Identities=11% Similarity=0.223 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
..+.++++|+++++++++||.|++...+. .+|..-..|.+.+|-.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~i~~~f~~~ 359 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGGST-RIPKVQSLIKDFFNGK 359 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECCCC-CChhHHHHHHHHhCCC
Confidence 45568899999999999999998876543 5677888888888643
No 277
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=28.27 E-value=95 Score=28.45 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEEEecCCCCCC-CHHHHHHHHcCC-CCccccceecCccchhHHHHHHHHHHHHHcCCCC
Q 016111 107 EEAATKAIKEWGQSKSQITHLIFCSLVGVDMP-GADYQLTKMLGL-NPSVKRVMLYFQGCYIGATAIRMAKDFAENNPGA 184 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p-~~a~~l~~~Lgl-~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~~ 184 (395)
..-++++|++++++.+|||.+.|.-..+.-.| .....+++-|-+ .+.+ ..--+.|-+-+. +. +++..-...
T Consensus 54 l~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kP---lv~VNHCigHIE---MG-R~iTgA~nP 126 (336)
T KOG2708|consen 54 LGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKP---LVGVNHCIGHIE---MG-REITGAQNP 126 (336)
T ss_pred HHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCC---cccchhhhhhhh---hc-ceeccCCCC
Confidence 34578899999999999998887655446556 233444544442 3332 223446655432 21 122222355
Q ss_pred eEEEEEeecc
Q 016111 185 RVLVVCSDLS 194 (395)
Q Consensus 185 ~vLvv~~d~~ 194 (395)
.||-|++-..
T Consensus 127 vvLYvSGGNT 136 (336)
T KOG2708|consen 127 VVLYVSGGNT 136 (336)
T ss_pred EEEEEeCCce
Confidence 6776666553
No 278
>PF11212 DUF2999: Protein of unknown function (DUF2999); InterPro: IPR021376 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=28.03 E-value=12 Score=27.24 Aligned_cols=41 Identities=17% Similarity=0.329 Sum_probs=23.4
Q ss_pred HhhccCCCCCCCce--EEEEcCCChHHHHHHHHHcCCCccchhH
Q 016111 286 EAFSPFGIKDWNSL--FWIVQPGGPAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 286 ~~L~~~gl~~~~di--~~i~hq~~~~~~~~i~~~lgi~~e~~~~ 327 (395)
..|++++++. +.| .|-.-.-|+.+--.+...||||+||+..
T Consensus 6 a~LKehnvsd-~qi~elFq~lT~NPl~AMa~i~qLGip~eKLQ~ 48 (82)
T PF11212_consen 6 AILKEHNVSD-EQINELFQALTQNPLAAMATIQQLGIPQEKLQQ 48 (82)
T ss_pred HHHHHcCCCH-HHHHHHHHHHhhCHHHHHHHHHHcCCCHHHHHH
Confidence 4566666665 544 2312223556666667777777777653
No 279
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=27.83 E-value=88 Score=30.99 Aligned_cols=45 Identities=20% Similarity=0.207 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHhCCC--CCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 104 KLGEEAATKAIKEWGQS--KSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~--~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
.....|++++++++|++ ++|||.+=+-.+. +.......+.||+.+
T Consensus 255 ~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F----~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 255 QAGRDAAAALWKAAGITDPRDEIDVAEIYVPF----SWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHHHcCCCCChhhCCEEEeccCC----hHHHHHHHHHcCCCC
Confidence 34557999999999997 6999987665542 223344456666653
No 280
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=27.80 E-value=73 Score=30.68 Aligned_cols=46 Identities=22% Similarity=0.183 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEEEecCCCC---CC--CHHHHHHHHcCCC
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIFCSLVGVD---MP--GADYQLTKMLGLN 151 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~---~p--~~a~~l~~~Lgl~ 151 (395)
....++++|+++|++++|||.|.++..-+.. .. ..+..++..++.+
T Consensus 49 l~~~i~~~l~~~~~~~~did~Iavt~gPg~~~~l~vg~~~ak~la~~~~~p 99 (322)
T TIGR03722 49 APKLIKEALEEAGVSLEDIDAVAFSQGPGLGPCLRVGATAARALALKLNKP 99 (322)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecCCchHHhHHHHHHHHHHHHHHhCCC
Confidence 3344999999999999999999986643311 11 2356666667754
No 281
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=27.61 E-value=2.9e+02 Score=26.20 Aligned_cols=72 Identities=21% Similarity=0.115 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcCCC
Q 016111 105 LGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENNPG 183 (395)
Q Consensus 105 la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g~~ 183 (395)
....|..++|++.++++++ .+|+ +..+ +.. .+ . .+..+......-.+|-.|.+.=.+.+.
T Consensus 11 ~i~~~~~~a~~~l~~~p~d--~iiv-sdiGc~~~------------~~-~---~l~~~~~~t~mG~alPaAiGaklA~Pd 71 (287)
T TIGR02177 11 GILSALQRALAELNLDPEQ--VVVV-SGIGCSAK------------TP-H---YVNVNGFHGLHGRALPVATGIKLANPH 71 (287)
T ss_pred HHHHHHHHHHHHhcCCCCC--EEEE-ECCCcccc------------cC-C---eEecCCcccccccHHHHHHHHHHHCCC
Confidence 4457889999999998875 3443 4333 210 11 1 122222222223333334333333567
Q ss_pred CeEEEEEeeccc
Q 016111 184 ARVLVVCSDLSL 195 (395)
Q Consensus 184 ~~vLvv~~d~~s 195 (395)
++|+++++|-..
T Consensus 72 ~~VVai~GDG~f 83 (287)
T TIGR02177 72 LKVIVVGGDGDL 83 (287)
T ss_pred CcEEEEeCchHH
Confidence 888888888753
No 282
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=27.02 E-value=1e+02 Score=27.89 Aligned_cols=50 Identities=14% Similarity=0.028 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC----CCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM----PGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~----p~~a~~l~~~Lgl~ 151 (395)
-++.....++++|.++|++..|+|.|.++..-+ +.. -+.|.-++..+|++
T Consensus 37 hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~ip 91 (220)
T COG1214 37 HAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIP 91 (220)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCC
Confidence 567778889999999999999999999977655 432 24455556656555
No 283
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=26.81 E-value=60 Score=29.23 Aligned_cols=41 Identities=15% Similarity=0.189 Sum_probs=28.8
Q ss_pred cCCCccchHHHHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 335 YGNMGGVSVFFILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 335 ~Gn~~sas~~i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
.|+-.+.+.|...+.+++. =.+++| ++||=++.|.|+..+.
T Consensus 49 i~~~~~is~P~~~a~~l~~----L~l~pg---~~VLeIGtGsGY~aAl 89 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEA----LDLKPG---DRVLEIGTGSGYQAAL 89 (209)
T ss_dssp EETTEEE--HHHHHHHHHH----TTC-TT----EEEEES-TTSHHHHH
T ss_pred ecceeechHHHHHHHHHHH----HhcCCC---CEEEEecCCCcHHHHH
Confidence 4555777889999999987 348999 9999999999988643
No 284
>PF12244 DUF3606: Protein of unknown function (DUF3606); InterPro: IPR022037 This family of proteins is found in bacteria. Proteins in this family are typically between 58 and 85 amino acids in length. There is a single completely conserved residue G that may be functionally important.
Probab=26.68 E-value=52 Score=22.94 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=24.4
Q ss_pred hHHHHHHHHHcCCCccchhHHHHHHHhcCCCc
Q 016111 308 PAIVNQIEAKLGLKQQKLSATRHVLSEYGNMG 339 (395)
Q Consensus 308 ~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~ 339 (395)
..-++.++++||++++++.. -++..||..
T Consensus 20 ~~ev~ywa~~~gvt~~~L~~---AV~~vG~~~ 48 (57)
T PF12244_consen 20 PYEVRYWAKRFGVTEEQLRE---AVRAVGNSR 48 (57)
T ss_pred HHHHHHHHHHHCcCHHHHHH---HHHHHCcCH
Confidence 45678899999999999876 599999974
No 285
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=26.57 E-value=2.4e+02 Score=29.70 Aligned_cols=55 Identities=20% Similarity=0.298 Sum_probs=40.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCC
Q 016111 95 QDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 95 ~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl 150 (395)
.+...+...+=..+.++++|+++|+.+++||.|++...+. .+|..-..|.+.+|.
T Consensus 296 fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGss-riP~v~~~i~~~f~~ 350 (595)
T TIGR02350 296 FEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGST-RIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcc-cChHHHHHHHHHhCC
Confidence 3333334445556678999999999999999999876543 467788888888884
No 286
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=26.45 E-value=39 Score=33.75 Aligned_cols=23 Identities=13% Similarity=0.070 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCCCCCcCEEEE
Q 016111 107 EEAATKAIKEWGQSKSQITHLIF 129 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~~~~Id~vi~ 129 (395)
.++++++|+++|++++|||+|-.
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~ 306 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNP 306 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEc
Confidence 58999999999999999998753
No 287
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=26.19 E-value=1.1e+02 Score=31.55 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCC-----CCCHHHHHHHHcCCC
Q 016111 101 EVPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVD-----MPGADYQLTKMLGLN 151 (395)
Q Consensus 101 ~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~-----~p~~a~~l~~~Lgl~ 151 (395)
+...|. .+++++|+++|++++|||.|.++...+.. .-+.|..++..++.+
T Consensus 48 H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~~ 102 (535)
T PRK09605 48 HAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDVP 102 (535)
T ss_pred HHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCCC
Confidence 344444 78999999999999999999875543321 113455667667755
No 288
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=25.44 E-value=1.1e+02 Score=28.51 Aligned_cols=82 Identities=20% Similarity=0.207 Sum_probs=47.3
Q ss_pred HHHHHHHHHhhccCCCCCCCce-EEEEcCC-----ChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 278 ENIEKCLDEAFSPFGIKDWNSL-FWIVQPG-----GPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 278 ~~~~~~i~~~L~~~gl~~~~di-~~i~hq~-----~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
+....+++++|+++++.+ ++| .+++-+. +..+-+.+.-..|+|...-..+ + |-.++|-..++..+.
T Consensus 28 ~L~~~a~~~al~~~~i~~-~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~---V----~~~CaSG~~Av~~a~ 99 (264)
T PF00108_consen 28 DLAAEAVKAALERAGIDP-EDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATT---V----NRACASGLQAVHLAA 99 (264)
T ss_dssp HHHHHHHHHHHHHHTSHG-GGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEE---E----E-GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccch-hhhhhcCcccccccccchhhhhhhhhhcccccccceee---e----hhhhhHHHHHHHHhh
Confidence 345578899999999997 888 5544332 3345566777789986432221 2 444555666666655
Q ss_pred HhhhhcCCccCCCCCceEEEEEE
Q 016111 352 RKSAEEGKVTTGEGLEWGVMFGI 374 (395)
Q Consensus 352 ~~~~~~g~i~~G~~~d~vll~~~ 374 (395)
.. |+.|. .|.+|..++
T Consensus 100 ~~------I~sG~-~dvvlagGv 115 (264)
T PF00108_consen 100 MA------IASGE-ADVVLAGGV 115 (264)
T ss_dssp HH------HHTTS--SEEEEEEE
T ss_pred hh------hcCCC-ccEEEEecc
Confidence 54 45552 144555443
No 289
>COG0013 AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=24.90 E-value=58 Score=35.77 Aligned_cols=51 Identities=18% Similarity=0.344 Sum_probs=37.5
Q ss_pred ccCCCCCCCceEEEEcCCChHHHHHHHHHcCCCccchhHH------HHHHHhcCCCccch
Q 016111 289 SPFGIKDWNSLFWIVQPGGPAIVNQIEAKLGLKQQKLSAT------RHVLSEYGNMGGVS 342 (395)
Q Consensus 289 ~~~gl~~~~di~~i~hq~~~~~~~~i~~~lgi~~e~~~~~------~~~~~~~Gn~~sas 342 (395)
+..|+.+ +.+++-.|.-....-..+.+..|+|++++..- |+ +-. ||||.|+
T Consensus 116 ~~lgl~~-ekL~vtvy~~Ddea~~~W~~~~gip~~rIir~~~~dNfW~-~G~-GPcGPcs 172 (879)
T COG0013 116 KVLGLPK-EKLYVTVYEDDDEAYNEWEKIIGIPPERIIRIGASDNFWE-MGD-GPCGPCS 172 (879)
T ss_pred hhcCCCH-HHEEEEEecCchHHHHHHHhhcCCCHHHeeecCcCCCCCC-CCC-cCCCCce
Confidence 6788987 88887667767777778888999999987531 22 222 8888876
No 290
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=24.62 E-value=5.2e+02 Score=24.80 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=45.3
Q ss_pred HHHHHHHHHhcCcceeeeeecchhhhcCCCCcCCCCCChhHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCcCEEEEEec
Q 016111 53 KQKFKRICEKSNVKKRYFHVTEDILKKNPNICAYDGSSLDSRQDILVREVPKLGEEAATKAIKEWGQSKSQITHLIFCSL 132 (395)
Q Consensus 53 ~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~ 132 (395)
+-+-.||.+..||..|++-.+.-. .....--+..++-|+++++...-|+.++.--.
T Consensus 242 ~iFr~~iA~aLgIThRfVG~EP~c------------------------~vT~~YNq~M~~~L~~~~~~~p~I~vvei~Rk 297 (352)
T COG3053 242 KIFRKYIAPALGITHRFVGTEPFC------------------------RVTAIYNQQMRYWLEDPTISAPPIEVVEIERK 297 (352)
T ss_pred HHHHHHHHHHhCcceeeecCCCCc------------------------HHHHHHHHHHHHHHhccCCCCCceEEEEeehh
Confidence 334467889999999976533211 13334445667888999888888998887544
Q ss_pred CCCCCCCHHHHHHHHc
Q 016111 133 VGVDMPGADYQLTKML 148 (395)
Q Consensus 133 t~~~~p~~a~~l~~~L 148 (395)
.....|=.|+++...|
T Consensus 298 ~~~~~~ISAS~VR~~l 313 (352)
T COG3053 298 KYQEMPISASRVRQLL 313 (352)
T ss_pred hhcCCcccHHHHHHHH
Confidence 3334443455555444
No 291
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=24.26 E-value=1.4e+02 Score=26.38 Aligned_cols=50 Identities=6% Similarity=0.171 Sum_probs=39.3
Q ss_pred HHHHHHHHHHhhccCCCCCCCceEEEEcCCC---------hHHHHHHHHHcCCCccchhH
Q 016111 277 SENIEKCLDEAFSPFGIKDWNSLFWIVQPGG---------PAIVNQIEAKLGLKQQKLSA 327 (395)
Q Consensus 277 ~~~~~~~i~~~L~~~gl~~~~di~~i~hq~~---------~~~~~~i~~~lgi~~e~~~~ 327 (395)
...+-..+.+.|++.|... +++++.||... ..|+..+.+.++++.++.+.
T Consensus 69 f~~~~~~m~~~l~~~gv~i-d~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~ 127 (181)
T COG0241 69 FDKLHNKMLKILASQGVKI-DGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYV 127 (181)
T ss_pred HHHHHHHHHHHHHHcCCcc-ceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEE
Confidence 3445567888899999985 99999999754 67889999999988877654
No 292
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=24.12 E-value=1.2e+02 Score=37.96 Aligned_cols=76 Identities=8% Similarity=-0.023 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCCCC----ccc----cceecCccchhHHHHHHHHHH
Q 016111 106 GEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGLNP----SVK----RVMLYFQGCYIGATAIRMAKD 176 (395)
Q Consensus 106 a~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl~~----~~~----~~~~i~~~C~~~~~aL~~A~~ 176 (395)
..++.+++|+++|++|++||+|-. +|.|+.--|.-..-|.+.+|-.. .+. -...-+..+++++.+|.-+.-
T Consensus 317 q~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~l 396 (2582)
T TIGR02813 317 QAKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVL 396 (2582)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHH
Confidence 468999999999999999998753 34443333444556666665321 110 011123445666666655555
Q ss_pred HHHcC
Q 016111 177 FAENN 181 (395)
Q Consensus 177 ll~~g 181 (395)
.|+.+
T Consensus 397 al~~~ 401 (2582)
T TIGR02813 397 ALHHK 401 (2582)
T ss_pred HHhcC
Confidence 55655
No 293
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=24.12 E-value=2.1e+02 Score=30.63 Aligned_cols=49 Identities=24% Similarity=0.363 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~ 151 (395)
..+=....++++|+++|+.+++||.|++...+. .+|..-..|.+.+|..
T Consensus 346 l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGss-riP~v~~~l~~~f~~~ 394 (663)
T PTZ00400 346 LLKKTIEPCEKCIKDAGVKKDELNDVILVGGMT-RMPKVSETVKKIFGKE 394 (663)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECCcc-CChHHHHHHHHHhCCC
Confidence 334445667899999999999999999876443 4677788888888854
No 294
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=23.85 E-value=1.1e+02 Score=30.43 Aligned_cols=42 Identities=19% Similarity=0.082 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCC--CCCcCEEEEEecCCCCCCCHHHHHHHHcCCCC
Q 016111 107 EEAATKAIKEWGQS--KSQITHLIFCSLVGVDMPGADYQLTKMLGLNP 152 (395)
Q Consensus 107 ~~Aa~~aL~~ag~~--~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~ 152 (395)
..|++++++++|++ ++|||.+-+.-+ +....-...+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~----Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDR----YSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecC----ChHHHHHHHHHcCCCC
Confidence 37999999999997 699998876433 2223345556666643
No 295
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=23.58 E-value=1.8e+02 Score=28.85 Aligned_cols=45 Identities=13% Similarity=0.073 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCcCEEEE-EecCCCCCCCHHHHHHHHcCC
Q 016111 104 KLGEEAATKAIKEWGQSKSQITHLIF-CSLVGVDMPGADYQLTKMLGL 150 (395)
Q Consensus 104 ~la~~Aa~~aL~~ag~~~~~Id~vi~-~s~t~~~~p~~a~~l~~~Lgl 150 (395)
+-..+|.+++|+++|+ ++||+|-. ++.|+..-+.....|.+.+|-
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~ 319 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGS 319 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcc
Confidence 3456899999999998 78998753 444443333444556666653
No 296
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=23.37 E-value=2.6e+02 Score=28.22 Aligned_cols=45 Identities=13% Similarity=0.125 Sum_probs=28.1
Q ss_pred HHHHHHHHhhccCCCCCCCce-EEEEcCC---C--hHHHHHHHHHcCCCccc
Q 016111 279 NIEKCLDEAFSPFGIKDWNSL-FWIVQPG---G--PAIVNQIEAKLGLKQQK 324 (395)
Q Consensus 279 ~~~~~i~~~L~~~gl~~~~di-~~i~hq~---~--~~~~~~i~~~lgi~~e~ 324 (395)
...++++++|+++|+.+ ++| .++.-+. + ..+.+.+.-..|++...
T Consensus 34 L~~~a~~~al~~agl~~-~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~ 84 (430)
T TIGR02446 34 LGKMVVSELLARSEIDP-KLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHT 84 (430)
T ss_pred HHHHHHHHHHHHcCCCH-HHCCEEEEEeccCcCccchHHHHHHHhCCCCCCC
Confidence 34578889999999996 777 4443221 1 23444444457988544
No 297
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=23.31 E-value=2.1e+02 Score=23.32 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=26.6
Q ss_pred HHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHc-CCCCcc
Q 016111 108 EAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKML-GLNPSV 154 (395)
Q Consensus 108 ~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~L-gl~~~~ 154 (395)
+-..+.+++.+++++||--|+|+.+.- -.+|+.+ ++++ |+...+
T Consensus 24 eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~~Vp 70 (118)
T PF07736_consen 24 ELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWDDVP 70 (118)
T ss_dssp HHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGTTSE
T ss_pred HHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCCccc
Confidence 335667788999999999998754433 3577644 3444 777654
No 298
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=23.23 E-value=97 Score=26.10 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=15.9
Q ss_pred CCccCCCCCceEEEEEEccchhhhh
Q 016111 358 GKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 358 g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
+....| |++|+.|.|+++.+
T Consensus 53 ~e~~~G-----IliCGtGiG~siaA 72 (141)
T PRK12613 53 AEGRLG-----IMVDAYGAGPFMVA 72 (141)
T ss_pred CCCceE-----EEEcCCCHhHhhhh
Confidence 555555 89999999999765
No 299
>COG4065 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.08 E-value=1.9e+02 Score=27.83 Aligned_cols=41 Identities=12% Similarity=0.161 Sum_probs=32.3
Q ss_pred HHhHHHHHHHHHHHHHHHhCCCCC-CcCEEEEEecCC--CCCCC
Q 016111 99 VREVPKLGEEAATKAIKEWGQSKS-QITHLIFCSLVG--VDMPG 139 (395)
Q Consensus 99 ~~~~~~la~~Aa~~aL~~ag~~~~-~Id~vi~~s~t~--~~~p~ 139 (395)
+++.++|......++|++++++.+ |++.|+-+|..- +..|.
T Consensus 94 resVaelVk~tl~eslkkA~l~i~~Dl~FVVRSTGVtAGF~SPE 137 (480)
T COG4065 94 RESVAELVKDTLLESLKKASLDIDTDLHFVVRSTGVTAGFASPE 137 (480)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccccceEEEeecccccCCCCHH
Confidence 446899999999999999999988 888888665432 55553
No 300
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=22.61 E-value=1.6e+02 Score=23.43 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=26.6
Q ss_pred CChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccchHHHHHHHHH
Q 016111 306 GGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVFFILDEIR 351 (395)
Q Consensus 306 ~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~i~L~~~~ 351 (395)
.+..+.+.+..-..-+.+.+......+.++||++..|.+..+...+
T Consensus 64 ~~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 64 FSEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred chHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 3444444444332322233322233577899999999999887654
No 301
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.55 E-value=4.8e+02 Score=23.69 Aligned_cols=45 Identities=13% Similarity=0.321 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CCCCCHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VDMPGADYQLTKMLG 149 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~~p~~a~~l~~~Lg 149 (395)
...|-..+.+.||+- .-+.+|.|.|+.+++ ...|+-...|+.++.
T Consensus 49 L~~M~~~t~~aAl~L---ada~vdvI~Y~CtsgS~i~G~~~d~ei~~~ie 95 (238)
T COG3473 49 LLKMESYTERAALEL---ADAGVDVIVYGCTSGSLIGGPGYDKEIAQRIE 95 (238)
T ss_pred HHHHHHHHHHHHHhc---CccccCEEEEeccceeeecCCchhHHHHHHHH
Confidence 566777777777663 345689999988777 345665666666664
No 302
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=22.46 E-value=2.8e+02 Score=26.66 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=45.2
Q ss_pred CchhHHHH-HHHHHHHHHHhhccCCCCCCCce-EEEE-cCCChHHH-HHHHHHcCCCccchhHHHHHHHhcCCCccchHH
Q 016111 269 SKNVATVV-SENIEKCLDEAFSPFGIKDWNSL-FWIV-QPGGPAIV-NQIEAKLGLKQQKLSATRHVLSEYGNMGGVSVF 344 (395)
Q Consensus 269 ~~~v~~~~-~~~~~~~i~~~L~~~gl~~~~di-~~i~-hq~~~~~~-~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas~~ 344 (395)
|.+.++.+ .+.+.++++.+|++++++. +|| +++- --.|.-+- ...++.|+||. +--||-|++..--
T Consensus 43 Ge~swEkAE~~m~~~A~~~al~Ka~l~~-~dId~~~aGDLlnQ~i~s~f~ar~l~iPf---------~GlygACST~~e~ 112 (329)
T PF07451_consen 43 GEKSWEKAESKMQKEAVELALKKAGLKK-EDIDYLFAGDLLNQIISSSFAARDLGIPF---------LGLYGACSTMMES 112 (329)
T ss_dssp TSSSHHHHHHHHHHHHHHHHHHHTT--G-GG-SEEEEEETTCCCCHHHHHHHHHT--E---------EEB--CCCHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHcCCCH-HHCeEEEehhhhhhhHHHHHHHHhcCCCc---------cchhhHHHHHHHH
Confidence 33444433 3445788999999999997 999 5432 22333333 34567789862 5679999999999
Q ss_pred HHHHHHHHh
Q 016111 345 FILDEIRRK 353 (395)
Q Consensus 345 i~L~~~~~~ 353 (395)
+.|+.++-+
T Consensus 113 l~laa~~vd 121 (329)
T PF07451_consen 113 LALAAMLVD 121 (329)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999887665
No 303
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=22.02 E-value=1.5e+02 Score=28.38 Aligned_cols=50 Identities=16% Similarity=0.051 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCC----CCHHHHHHHHcCCC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDM----PGADYQLTKMLGLN 151 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~----p~~a~~l~~~Lgl~ 151 (395)
-.+.....++++|+++|++.+|||.|.++..-+ +.. -+.|.-++..++++
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p 103 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKP 103 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCC
Confidence 345666778999999999999999999866544 221 13455666666654
No 304
>COG3737 Uncharacterized conserved protein [Function unknown]
Probab=21.96 E-value=3e+02 Score=22.48 Aligned_cols=60 Identities=13% Similarity=0.005 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGA 168 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~ 168 (395)
.++|..+...+.|+.+ .+|..||++|... .+.|..-.....+-|+.-. +++...+|-++-
T Consensus 52 ~~~Lt~e~f~~vl~~a----~~~EilliGTG~~~rf~p~~l~aal~~~gIsve---~Mst~AA~RTYN 112 (127)
T COG3737 52 LSDLTPEDFERVLAEA----PDVEILLIGTGARLRFPPPKLRAALKAAGISVE---PMSTGAAVRTYN 112 (127)
T ss_pred hhhCCHHHHHHHHhcC----CCceEEEEecCccccCCCHHHHHHHHHcCCccc---cccchhhHHHHH
Confidence 6778888888888865 4789999998877 4555444444455566654 355566665544
No 305
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=21.75 E-value=71 Score=26.89 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=19.9
Q ss_pred HHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 346 ILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 346 ~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
.+++.+.+ +....| ||+|+.|.|+++.+
T Consensus 46 ~va~~V~~----~e~~~G-----IliCGtGiG~siaA 73 (141)
T TIGR01118 46 AVASEVQK----DEQNLG-----IVIDAYGAGSFMVA 73 (141)
T ss_pred HHHHHHHc----CCCceE-----EEEcCCCHhHhhhh
Confidence 34444444 656666 99999999999865
No 306
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=21.11 E-value=74 Score=26.81 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=19.9
Q ss_pred HHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 346 ILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 346 ~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
.+++.+.+ |+...| ||+|+.|.|+++.+
T Consensus 46 ~va~~V~~----~~~~~G-----IliCGTGiG~siaA 73 (142)
T PRK08621 46 AVAKEVNK----SEDNLG-----IVIDAYGAGSFMVA 73 (142)
T ss_pred HHHHHHHc----CCCceE-----EEEcCCChhhhhhh
Confidence 34444444 555566 99999999999875
No 307
>PF06089 Asparaginase_II: L-asparaginase II; InterPro: IPR010349 This family consists of several bacterial L-asparaginase II proteins. L-asparaginase (3.5.1.1 from EC) catalyses the hydrolysis of L-asparagine to L-aspartate and ammonium. Rhizobium etli possesses two asparaginases: asparaginase I, which is thermostable and constitutive, and asparaginase II, which is thermolabile, induced by asparagine and repressed by the carbon source [].
Probab=21.03 E-value=2.3e+02 Score=27.49 Aligned_cols=66 Identities=11% Similarity=-0.025 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC-CCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHH
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG-VDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFA 178 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~-~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll 178 (395)
-...-+++++..|+++|+++++.. |.+ +.....+..-.-+-|..+ ..+.+.|+|=..++-.+..+.
T Consensus 77 Ge~~H~~~v~~~L~k~gL~e~~L~------Cg~~~P~~~~~~~~li~~g~~p-----~~l~~NCSGKHagmLa~c~~~ 143 (324)
T PF06089_consen 77 GEPEHVEAVRSMLAKAGLSEEDLQ------CGPHWPLDEEAREALIRAGGKP-----SRLHNNCSGKHAGMLALCVHL 143 (324)
T ss_pred ChHHHHHHHHHHHHHcCCCHHHcC------CCCCCCCCHHHHHHHHhCCCCC-----CcccccChhHHHHHHHHHHHc
Confidence 456778999999999999988762 222 222222222222224333 347899999998887776654
No 308
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=20.85 E-value=71 Score=26.85 Aligned_cols=29 Identities=21% Similarity=0.392 Sum_probs=20.8
Q ss_pred HHHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 345 FILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 345 i~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
..+++.+.+ |....| |++|+.|.|+++.+
T Consensus 46 ~~va~~V~~----~~~d~G-----IliCgtGiG~~iaA 74 (140)
T PF02502_consen 46 EKVAEAVAS----GEADRG-----ILICGTGIGMSIAA 74 (140)
T ss_dssp HHHHHHHHT----TSSSEE-----EEEESSSHHHHHHH
T ss_pred HHHHHHHHc----ccCCeE-----EEEcCCChhhhhHh
Confidence 344555555 666666 89999999999865
No 309
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=20.75 E-value=71 Score=27.13 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=20.1
Q ss_pred HHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 346 ILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 346 ~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
.+++.+.+ |....| |++|+.|.|+++.+
T Consensus 49 ~va~~V~~----g~~~~G-----IliCGtGiG~siaA 76 (148)
T PRK05571 49 KVAEAVVA----GEADRG-----ILICGTGIGMSIAA 76 (148)
T ss_pred HHHHHHHc----CCCCEE-----EEEcCCcHHHHHHH
Confidence 34444554 666666 89999999999875
No 310
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=20.70 E-value=6.5e+02 Score=22.97 Aligned_cols=61 Identities=26% Similarity=0.249 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCCCCCCCHHHHHHHHcCCCCccccceecCccchhHHHHHHHHHHHHHcC
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVGVDMPGADYQLTKMLGLNPSVKRVMLYFQGCYIGATAIRMAKDFAENN 181 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~~~~p~~a~~l~~~Lgl~~~~~~~~~i~~~C~~~~~aL~~A~~ll~~g 181 (395)
...+....+++++++- ..|.|+.+. .+ +-..+.+|+..+|++ ..| |-..|..+|.++++.|
T Consensus 158 ~~~~l~~~~~~a~~ed-----gAeaIiLGC-AG--ms~la~~Lq~~~gvP-----VID------gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 158 AEALLVIEAAEALKED-----GAEAIILGC-AG--MSDLADQLQKAFGVP-----VID------GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHHHHHhhhc-----CCCEEEEcC-cc--HHHHHHHHHHHhCCC-----ccc------chHHHHHHHHHHHhhc
Confidence 4456666666666654 356677644 33 335689999999955 333 3455677777777765
No 311
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=20.40 E-value=1.1e+02 Score=28.41 Aligned_cols=59 Identities=19% Similarity=0.162 Sum_probs=38.7
Q ss_pred HHHHHhhccCCCCCCCce-EEEEcCCChHHHHHHHHHcCCCccchhHHHHHHHhcCCCccch
Q 016111 282 KCLDEAFSPFGIKDWNSL-FWIVQPGGPAIVNQIEAKLGLKQQKLSATRHVLSEYGNMGGVS 342 (395)
Q Consensus 282 ~~i~~~L~~~gl~~~~di-~~i~hq~~~~~~~~i~~~lgi~~e~~~~~~~~~~~~Gn~~sas 342 (395)
.+|.++|+..|++. .|| .+=.+.+-..-.-.+.+.|+++.+|+..+- -.-.+||--.+|
T Consensus 297 PAI~~vLKksGlkl-~DiDl~EvNEAFApQ~LAv~r~L~ld~sKlNVNG-GAIALGHPLgaS 356 (396)
T KOG1391|consen 297 PAISGVLKKSGLKL-KDIDLVEVNEAFAPQYLAVERSLDLDISKLNVNG-GAIALGHPLGAS 356 (396)
T ss_pred HHHHHHHHHcCCcc-cccceEEechhhchHHHHHHHhhCCChhhccccC-ceeeccCccccC
Confidence 47889999999997 999 554544444444567788999998875431 112356654443
No 312
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=20.20 E-value=78 Score=26.75 Aligned_cols=28 Identities=21% Similarity=0.506 Sum_probs=20.2
Q ss_pred HHHHHHHhhhhcCCccCCCCCceEEEEEEccchhhhh
Q 016111 346 ILDEIRRKSAEEGKVTTGEGLEWGVMFGIGAGVTVDT 382 (395)
Q Consensus 346 ~L~~~~~~~~~~g~i~~G~~~d~vll~~~G~G~s~~a 382 (395)
.+++.+.+ |....| |++|+.|.|+++.+
T Consensus 46 ~va~~V~~----g~~~~G-----IliCGtGiG~siaA 73 (144)
T TIGR00689 46 LVADKVVA----GEVSLG-----ILICGTGIGMSIAA 73 (144)
T ss_pred HHHHHHHc----CCCceE-----EEEcCCcHHHHHHH
Confidence 34444554 666666 89999999999875
No 313
>PRK00035 hemH ferrochelatase; Reviewed
Probab=20.16 E-value=5.5e+02 Score=24.61 Aligned_cols=93 Identities=16% Similarity=0.048 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCcCEEEEEecCC--CC---CC------CHHHHHHHHcCCC-CccccceecCccchhH--
Q 016111 102 VPKLGEEAATKAIKEWGQSKSQITHLIFCSLVG--VD---MP------GADYQLTKMLGLN-PSVKRVMLYFQGCYIG-- 167 (395)
Q Consensus 102 ~~~la~~Aa~~aL~~ag~~~~~Id~vi~~s~t~--~~---~p------~~a~~l~~~Lgl~-~~~~~~~~i~~~C~~~-- 167 (395)
..+..++.+++++++.+-..++..+|+.++++| +. .| .++..+.+++|++ ..+..+|....|...+
T Consensus 168 ~i~~l~~~I~~~~~~~~~~~~~~~llfs~HG~P~~~~~~gd~Y~~~~~~t~~~l~~~l~~~~~~~~~~fqs~~g~~~Wl~ 247 (333)
T PRK00035 168 YIEALAESIREALAKHGEDPEPDRLLFSAHGLPQRYIDKGDPYQQQCEETARLLAEALGLPDEDYDLTYQSRFGPEPWLE 247 (333)
T ss_pred HHHHHHHHHHHHHHhcCcccCCcEEEEecCCCchHHhhcCCChHHHHHHHHHHHHHHhCCCCCCeEEEeeCCCCCCccCC
Confidence 345555667777765542224566777788877 21 22 2567888999972 2232244333344444
Q ss_pred HHHHHHHHHHHHcCCCCeEEEEEeeccc
Q 016111 168 ATAIRMAKDFAENNPGARVLVVCSDLSL 195 (395)
Q Consensus 168 ~~aL~~A~~ll~~g~~~~vLvv~~d~~s 195 (395)
-.--+....+-+.| .++|+|+.--..+
T Consensus 248 P~~~~~l~~l~~~g-~k~V~v~P~~Fv~ 274 (333)
T PRK00035 248 PYTDDTLEELAEKG-VKKVVVVPPGFVS 274 (333)
T ss_pred CCHHHHHHHHHHcC-CCeEEEECCeeec
Confidence 22233444555555 6888888754444
No 314
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=20.15 E-value=1.5e+02 Score=24.06 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHHHHhhccCCCCCCCce-EEEEcC
Q 016111 271 NVATVVSENIEKCLDEAFSPFGIKDWNSL-FWIVQP 305 (395)
Q Consensus 271 ~v~~~~~~~~~~~i~~~L~~~gl~~~~di-~~i~hq 305 (395)
.-.+.+.+...+++.+.++++++++ +|| .++|..
T Consensus 13 n~~e~I~~at~eLl~~i~~~N~l~~-~dIvSi~FT~ 47 (118)
T PF07736_consen 13 NTPEEILEATRELLEEILERNELSP-EDIVSIIFTV 47 (118)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTT--G-GGEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCH-HHEEEEEEEe
Confidence 3345567777889999999999998 999 555543
Done!