BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016113
(395 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1
SV=2
Length = 405
Score = 560 bits (1442), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/405 (68%), Positives = 332/405 (81%), Gaps = 10/405 (2%)
Query: 1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
MG ++ EE+PL LFE+ RKIH A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60
Query: 61 KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE MELVP+EELE
Sbjct: 61 KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120
Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
A ++ A D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180
Query: 181 VLDDDGEEEREAWLTTISLAVC---------KKEEDMLSAVKERQLKGGEEEFSEVVLDE 231
+ DDD EEEREAWL++I+LA+C K+EE+MLSA+KERQLK GE FS LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240
Query: 232 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 291
R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300
Query: 292 GGGLTSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDN 351
GG L++ERERM AQVFQP HR+PTM IE+AGL EM +MN WQE K +EEA ++WY D
Sbjct: 301 GGPLSTERERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDK 360
Query: 352 -RKLGTSENDNEDDDDDAVQKARAFDDWKDDNPRGAGNKKLTPCG 395
+ + +++D+D++AV KARAFDDWKDDNPRGAGNKKLTPCG
Sbjct: 361 PLRRKEEDEEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405
>sp|Q9Y7T1|YCJ5_SCHPO Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC63.05 PE=3 SV=1
Length = 323
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 164/394 (41%), Gaps = 99/394 (25%)
Query: 13 SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
SL E + ++ S D + E EKC +V +L +FSSNE D+I T+ L+Y+
Sbjct: 5 SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64
Query: 73 LVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTD 132
++ Y L + +E+ + DRL+ ++ ++ + F+S C+ L P + KP D
Sbjct: 65 MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKP------MQDEKPKTEAD 118
Query: 133 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREA 192
R KIAR++ ++ E +L+ A S E EE +ER+
Sbjct: 119 TRTLKIARYRMRQNLEKELK----------------ALSKDSETNEE--------QERKF 154
Query: 193 WLTTISLAV---------CKKEEDMLSAVKERQLKGGE--EEFSEVVLDERSKKAE--SW 239
WLT + +AV + E D+L + +K + E+ E + E K+ E SW
Sbjct: 155 WLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLRREERKQKEGSSW 214
Query: 240 HRDAAIRAQY----TKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGL 295
D R + +P QP T +
Sbjct: 215 RLDLNTRDKILDKNNRPLQPFT-------------------------------------I 237
Query: 296 TSERERMAAQVFQPMHRLPTMSIEEAGLKEMEMMNKWQEMNVKLMEEANSAWYKDNRKLG 355
S+R VF + LPTM+++E +EM+ N KDN
Sbjct: 238 VSDRNETRKNVFGFGYNLPTMTVDEYLDEEMK--------------RGNIISQKDNPPKS 283
Query: 356 TSENDNEDDDDDA-VQKARAFDDWKDDNPRGAGN 388
S+++++ + DA K R +D++K+ NPRG+GN
Sbjct: 284 DSDDEDDYEKLDAKTMKDRYWDEFKEANPRGSGN 317
>sp|P78318|IGBP1_HUMAN Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1
Length = 339
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 23/170 (13%)
Query: 8 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
+LP LP LFE GR++ ++ATE S + V KG ++LEK +M+ +L LFS NE
Sbjct: 8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67
Query: 61 KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEEL 119
++I++ +LKY+LVP F G L ++++ RL L+ ++ +++ C V E EL
Sbjct: 68 LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH-VAEFEL 126
Query: 120 --------------EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIK 155
++A A QR KI R+K+++ E +L +K
Sbjct: 127 PKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMK 176
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 368 AVQKARAFDDWKDDNPRGAGNKK 390
+ +AR +DDWKD +PRG GN++
Sbjct: 314 TLHRAREWDDWKDTHPRGYGNRQ 336
>sp|Q61249|IGBP1_MOUSE Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=1 SV=1
Length = 340
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELV-----------PE 116
LKY++VP G L ++++ RL L+ ++ F++ C + E
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 136
Query: 117 EELEAVAQAKP--TAFTDQRARKIARFKRQRAAESKLQEIK 155
+ + A P A QR KI R+K+++ E +L +K
Sbjct: 137 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 177
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 365 DDDAVQKARAFDDWKDDNPRGAGNKK 390
++ A+ + R +DDWKD +PRG GN++
Sbjct: 312 EEKALHRMREWDDWKDTHPRGYGNRQ 337
>sp|O08836|IGBP1_RAT Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2
SV=2
Length = 340
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASID 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEEL-------- 119
LKY++VP G L ++++ RL L+ ++ F++ C V E +L
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYH-VAEFQLPQTKNNSA 135
Query: 120 ------EAVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIK 155
++A A QR KI R+K+++ E +L +K
Sbjct: 136 ENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 177
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 364 DDDDAVQKARAFDDWKDDNPRGAGNKK 390
+++ A+ + R +DDWKD +PRG GN++
Sbjct: 311 NEEKALHRMREWDDWKDTHPRGYGNRQ 337
>sp|Q9QZ29|IGB1B_MOUSE Immunoglobulin-binding protein 1b OS=Mus musculus GN=Igbp1b PE=2
SV=1
Length = 343
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 19/146 (13%)
Query: 28 SGCDP--DAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK- 84
+G P + VR+ ++LEK DM+ +L LFS NE ++I++A+LKY+++P G L K
Sbjct: 34 TGSKPIQEKVREALKLLEKASDMLSQLDLFSRNEDWEEIASADLKYLMLPALKGALTLKL 93
Query: 85 IAQDDRLQILKASQAKLKEFISFCEIMEL----VPEEELEAVAQAKPTAFTD-------- 132
+ RL +L+ ++ F++ + +P + ++ + P A +D
Sbjct: 94 VGSSKRLGLLQDAREHFMNFLTQTHSYHVADFQLPWAQSSSM-EGNPAATSDAQEQNLVA 152
Query: 133 ---QRARKIARFKRQRAAESKLQEIK 155
QR KI R+K+++A E +L +K
Sbjct: 153 MASQRQTKIQRYKQKKAVEQRLSSLK 178
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 362 EDDDDDAVQKARAFDDWKDDNPRGAGNKK 390
ED+D++A+ + + +DDWKD +PRG GN++
Sbjct: 312 EDEDENALHRMQEWDDWKDTHPRGYGNRQ 340
>sp|Q04372|TAP42_YEAST Type 2A phosphatase-associated protein 42 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAP42 PE=1
SV=1
Length = 366
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 47/72 (65%), Gaps = 8/72 (11%)
Query: 48 MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK-------IAQDDRLQILKASQAK 100
+ +L LFS+NET DD+STA++K++ V Y+LG LI + +AQ ++++ ++
Sbjct: 49 IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKS- 107
Query: 101 LKEFISFCEIME 112
++ FI+F +++
Sbjct: 108 VESFINFLTLLQ 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 146,722,330
Number of Sequences: 539616
Number of extensions: 6215892
Number of successful extensions: 26557
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 342
Number of HSP's that attempted gapping in prelim test: 25727
Number of HSP's gapped (non-prelim): 960
length of query: 395
length of database: 191,569,459
effective HSP length: 120
effective length of query: 275
effective length of database: 126,815,539
effective search space: 34874273225
effective search space used: 34874273225
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)