BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016117
(395 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 181/295 (61%), Gaps = 9/295 (3%)
Query: 72 LQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-EDEFKM 130
L+ F+ ++L A+ FS N++G GGFG VY+G L++G VA+K + + QG E +F+
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 131 EVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
EVE++ LL L G+C + +LLVY YMANG + L S LDW R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKR 141
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
RIAL +A+GL +LH+HC P +IHRD K++NILLD+ F A V DFGLAK+ D HV
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDXHVX 200
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEG--VLVSWA 307
V GT G++APEY TG + K+DV+ YGV+LLEL+TG+ D+ + + + +L+ W
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 308 LPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSL 362
L ++ K+ ++D L+G Y +EV Q+ +A +C Q RP M++VV+ L
Sbjct: 261 KGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/295 (41%), Positives = 179/295 (60%), Gaps = 9/295 (3%)
Query: 72 LQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-EDEFKM 130
L+ F+ ++L A+ F N++G GGFG VY+G L++G VA+K + + QG E +F+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 131 EVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
EVE++ LL L G+C + +LLVY YMANG + L S LDW R
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKR 133
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
RIAL +A+GL +LH+HC P +IHRD K++NILLD+ F A V DFGLAK+ D HV
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDXHVX 192
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEG--VLVSWA 307
V G G++APEY TG + K+DV+ YGV+LLEL+TG+ D+ + + + +L+ W
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 308 LPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSL 362
L ++ K+ ++D L+G Y +EV Q+ +A +C Q RP M++VV+ L
Sbjct: 253 KGLLKEK-KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 169/284 (59%), Gaps = 8/284 (2%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLR 139
L AT F ++GHG FG VY+GVL +G KVA+K QG +EF+ E+E L R
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P+L++L+G+C +R ++ L+Y YM NG L+ HLY GS+ + WE RL I + AA+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAAR 150
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
GL +LH + +IHRD KS NILLD+NF K++DFG++K G++ H+ V GT GY
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKIL 318
+ PEY + G LT KSDVYS+GVVL E+L R I + P L WA+ + ++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLE 266
Query: 319 EIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSL 362
+I+DP L + + + + A C+ ++ RP M DV+ L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 169/284 (59%), Gaps = 8/284 (2%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLR 139
L AT F ++GHG FG VY+GVL +G KVA+K QG +EF+ E+E L R
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P+L++L+G+C +R ++ L+Y YM NG L+ HLY GS+ + WE RL I + AA+
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAAR 150
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
GL +LH + +IHRD KS NILLD+NF K++DFG++K G++ H+ V GT GY
Sbjct: 151 GLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKIL 318
+ PEY + G LT KSDVYS+GVVL E+L R I + P L WA+ + ++
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES-HNNGQLE 266
Query: 319 EIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSL 362
+I+DP L + + + + A C+ ++ RP M DV+ L
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 177/314 (56%), Gaps = 24/314 (7%)
Query: 60 ESGKLEVTTDNGLQVFTFKQLHSATGGFSK------SNVVGHGGFGLVYRGVLSNGRKVA 113
E+ LEV+ D F+F +L + T F + N +G GGFG+VY+G ++N VA
Sbjct: 1 ENKSLEVS-DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVA 58
Query: 114 IK----LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQ 168
+K ++D ++ + +F E++++ + + L+ LLG+ SD L LVY YM NG L
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 169 EHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFH 228
+ L +G+ L W R +IA AA G+ FLHE+ IHRD KS+NILLD+ F
Sbjct: 119 DRLSCLDGT----PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFT 171
Query: 229 AKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTG 288
AK+SDFGLA+ A + +R++GT Y+APE AL G +T KSD+YS+GVVLLE++TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
Query: 289 RVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPE 348
+D ++ +L+ + + I + +D + S V + ++A+ C+ +
Sbjct: 231 LPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEK 287
Query: 349 ADYRPLMADVVQSL 362
+ RP + V Q L
Sbjct: 288 KNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 176/314 (56%), Gaps = 24/314 (7%)
Query: 60 ESGKLEVTTDNGLQVFTFKQLHSATGGFSK------SNVVGHGGFGLVYRGVLSNGRKVA 113
E+ LEV+ D F+F +L + T F + N +G GGFG+VY+G ++N VA
Sbjct: 1 ENKSLEVS-DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVA 58
Query: 114 IK----LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQ 168
+K ++D ++ + +F E++++ + + L+ LLG+ SD L LVY YM NG L
Sbjct: 59 VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118
Query: 169 EHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFH 228
+ L +G+ L W R +IA AA G+ FLHE+ IHRD KS+NILLD+ F
Sbjct: 119 DRLSCLDGT----PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFT 171
Query: 229 AKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTG 288
AK+SDFGLA+ A + R++GT Y+APE AL G +T KSD+YS+GVVLLE++TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
Query: 289 RVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPE 348
+D ++ +L+ + + I + +D + S V + ++A+ C+ +
Sbjct: 231 LPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEK 287
Query: 349 ADYRPLMADVVQSL 362
+ RP + V Q L
Sbjct: 288 KNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 171/306 (55%), Gaps = 23/306 (7%)
Query: 68 TDNGLQVFTFKQLHSATGGFSK------SNVVGHGGFGLVYRGVLSNGRKVAIK----LM 117
+D F+F +L + T F + N +G GGFG+VY+G ++N VA+K ++
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 60
Query: 118 DQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
D ++ + +F E++++ + + L+ LLG+ SD L LVY YM NG L + L +G
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ L W R +IA AA G+ FLHE+ IHRD KS+NILLD+ F AK+SDFGL
Sbjct: 121 T----PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGL 173
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
A+ A + R++GT Y+APE AL G +T KSD+YS+GVVLLE++TG +D ++
Sbjct: 174 ARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 297 PSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
+L+ + + I + +D + S V + ++A+ C+ + + RP +
Sbjct: 233 EP--QLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIK 289
Query: 357 DVVQSL 362
V Q L
Sbjct: 290 KVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/230 (41%), Positives = 136/230 (59%), Gaps = 20/230 (8%)
Query: 75 FTFKQLHSATGGFSK------SNVVGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG 124
F+F +L + T F + N G GGFG+VY+G ++N VA+K ++D ++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 125 EDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASK 183
+ +F E+++ + + L+ LLG+ SD L LVY Y NG L + L +G+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT----PP 120
Query: 184 LDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDK 243
L W R +IA AA G+ FLHE+ IHRD KS+NILLD+ F AK+SDFGLA+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 244 AGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
A +R++GT Y APE AL G +T KSD+YS+GVVLLE++TG +D
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVD 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 144/279 (51%), Gaps = 29/279 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGE--DEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG V+R +G VA+K++ + E +EF EV ++ RLR P ++ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ L +V +Y++ G L L+ + +LD RL +A + AKG+ +LH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH----KSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 210 PVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALTGH 268
P++HR+ KS N+L+DK + KV DFGL+++ KA +S++ GT ++APE
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQ 328
KSDVYS+GV+L EL T + P P+ V + RL +I ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL----EIPRNLNP----- 266
Query: 329 YSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
QVAAI C E RP A ++ L PL+K
Sbjct: 267 -------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 143/279 (51%), Gaps = 29/279 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGE--DEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG V+R +G VA+K++ + E +EF EV ++ RLR P ++ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ L +V +Y++ G L L+ + +LD RL +A + AKG+ +LH +P
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH----KSGAREQLDERRRLSMAYDVAKGMNYLHNR-NP 158
Query: 210 PVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALTGH 268
P++HRD KS N+L+DK + KV DFGL+++ KA + ++ GT ++APE
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL---KASXFLXSKXAAGTPEWMAPEVLRDEP 215
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQ 328
KSDVYS+GV+L EL T + P P+ V + RL +I ++P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRL----EIPRNLNP----- 266
Query: 329 YSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
QVAAI C E RP A ++ L PL+K
Sbjct: 267 -------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 51/306 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 92
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 146
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 147 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 247
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 248 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 298
Query: 370 RSTPKI 375
RS PKI
Sbjct: 299 RSLPKI 304
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 147/306 (48%), Gaps = 51/306 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 248
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 249 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 299
Query: 370 RSTPKI 375
RS PKI
Sbjct: 300 RSLPKI 305
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 51/298 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + IA + A+G+++LH +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT---G 267
+IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 268 HLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI-----MD 322
+ +SDVY++G+VL EL+TG++P + +R++I+ + +
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIFMVGRGYLS 233
Query: 323 PALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRSTPKI 375
P L S MK ++ A C++ + D RPL ++ S+ L RS PKI
Sbjct: 234 PDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA---RSLPKI 282
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 145/298 (48%), Gaps = 51/298 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + IA + A+G+++LH +
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDYLH---AKS 126
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT---G 267
+IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 268 HLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI-----MD 322
+ +SDVY++G+VL EL+TG++P + +R++I+ + +
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIFMVGRGYLS 230
Query: 323 PALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRSTPKI 375
P L S MK ++ A C++ + D RPL ++ S+ L RS PKI
Sbjct: 231 PDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA---RSLPKI 279
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G ED+F E E++ +L P L+ L G C +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV+++M +G L ++L G + ET L + L+ +G+ +L E C V
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEEAC---V 144
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 200
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 234
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 51/297 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + IA + A+G+++LH +
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDYLH---AKS 129
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT---G 267
+IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 268 HLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI-----MD 322
+ +SDVY++G+VL EL+TG++P + +R++I+ + +
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIFMVGRGYLS 233
Query: 323 PALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRSTPK 374
P L S MK ++ A C++ + D RPL ++ S+ L RS PK
Sbjct: 234 PDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA---RSLPK 281
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 51/306 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 85
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 139
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA S +G H ++ G+ ++APE
Sbjct: 140 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 240
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 241 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 291
Query: 370 RSTPKI 375
RS PKI
Sbjct: 292 RSLPKI 297
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 51/305 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 220
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 221 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 271
Query: 370 RSTPK 374
RS PK
Sbjct: 272 RSLPK 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 51/306 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 93
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 147
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA S +G H ++ G+ ++APE
Sbjct: 148 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 248
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 249 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 299
Query: 370 RSTPKI 375
RS PKI
Sbjct: 300 RSLPKI 305
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 16/204 (7%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + + IA + A+G+++LH +
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLH---AKS 128
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL---TG 267
+IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 268 HLTTKSDVYSYGVVLLELLTGRVP 291
+ +SDVY++G+VL EL+TG++P
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G E++F E E++ +L P L+ L G C +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV+++M +G L ++L G + ET L + L+ +G+ +L E C V
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEEAC---V 122
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 178
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 49/300 (16%)
Query: 90 SNVVGHGGFGLVYRGVLSNGRKVAI-KLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
S +G G FG VY+G V I K++D +Q + F+ EV +L + R +L +G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQ-AFRNEVAVLRKTRHVNILLFMG 99
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
Y + +V + L +HL+ + +D IA + A+G+++LH +
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLH---A 150
Query: 209 PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL--- 265
+IHRD KS+NI L + K+ DFGLA + S +G + G+ ++APE
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIM---- 321
+ +SDVYSYG+VL EL+TG +P + +R++I+ ++
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPYS----------------HINNRDQIIFMVGRGY 254
Query: 322 -DPALEGQY-----SMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRSTPKI 375
P L Y +MK ++ A CV+ + RPL ++ S+ L S PKI
Sbjct: 255 ASPDLSKLYKNCPKAMKRLV------ADCVKKVKEERPLFPQILSSIELL---QHSLPKI 305
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G E++F E E++ +L P L+ L G C +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV+++M +G L ++L G + ET L + L+ +G+ +L E C V
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEEAC---V 127
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 183
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 217
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 118/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G E++F E E++ +L P L+ L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV+++M +G L ++L G + ET L + L+ +G+ +L E C V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEEAC---V 124
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 180
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 145/304 (47%), Gaps = 51/304 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA + S +G H ++ G+ ++APE
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 220
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 221 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 271
Query: 370 RSTP 373
RS P
Sbjct: 272 RSLP 275
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 145/305 (47%), Gaps = 51/305 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPY 142
G + +G G FG VY+G VA+K+++ Q FK EV +L + R
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+L +GY + + +V + L HL+ + +K + + IA + A+G+++
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLH------IIETKFEMIKLIDIARQTAQGMDY 119
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH + +IHRD KS+NI L ++ K+ DFGLA S +G H ++ G+ ++APE
Sbjct: 120 LH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 263 YALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
+ +SDVY++G+VL EL+TG++P + +R++I+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIF 220
Query: 320 I-----MDPALEGQYS-----MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ + P L S MK ++ A C++ + D RPL ++ S+ L
Sbjct: 221 MVGRGYLSPDLSKVRSNCPKAMKRLM------AECLKKKRDERPLFPQILASIELLA--- 271
Query: 370 RSTPK 374
RS PK
Sbjct: 272 RSLPK 276
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 140/285 (49%), Gaps = 38/285 (13%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + + IA + A+G+++LH +
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLH---AKS 140
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL---TG 267
+IHRD KS+NI L ++ K+ DFGLA S +G H ++ G+ ++APE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 268 HLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI-----MD 322
+ +SDVY++G+VL EL+TG++P + +R++I+E+ +
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYS----------------NINNRDQIIEMVGRGSLS 244
Query: 323 PALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
P L S ++ + A C++ + D RP ++ + L +
Sbjct: 245 PDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G E++F E E++ +L P L+ L G C +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV ++M +G L ++L G + ET L + L+ +G+ +L E C V
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEEAC---V 125
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 181
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 111/204 (54%), Gaps = 16/204 (7%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGK--QGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG VY+G VA+K+++ Q FK EV +L + R +L +GY
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ + +V + L HL+ + +K + + + IA + A+G+++LH +
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASE------TKFEMKKLIDIARQTARGMDYLH---AKS 140
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL---TG 267
+IHRD KS+NI L ++ K+ DFGLA S +G H ++ G+ ++APE +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 268 HLTTKSDVYSYGVVLLELLTGRVP 291
+ +SDVY++G+VL EL+TG++P
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 28/214 (13%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLM----DQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
++G GGFG VYR G +VA+K D+ Q + + E +L L+ P ++AL
Sbjct: 14 IIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C L + A GG P N S ++ + + A++ A+G+ +LH+
Sbjct: 73 GVCLKEPNLCLVMEFARGG------PLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 208 SPPVIHRDFKSSNILLDK--------NFHAKVSDFGLAKIGSDKAGGHVSTRV--LGTQG 257
P+IHRD KSSNIL+ + N K++DFGLA+ H +T++ G
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAYA 179
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVP 291
++APE + SDV+SYGV+L ELLTG VP
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 117/215 (54%), Gaps = 20/215 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FGLV+ G N KVAIK + + G E++F E E++ +L P L+ L G C +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + LV+++M +G L ++L G + ET L + L+ +G+ +L E V
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAA------ETLLGMCLDVCEGMAYLEE---ASV 124
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
IHRD + N L+ +N KVSDFG+ + D T GT+ + +PE
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----YTSSTGTKFPVKWASPEVFSFSR 180
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGV 302
++KSDV+S+GV++ E+ + G++P + N+ + E V
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSEVV 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 137
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 191
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 139
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 193
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 140
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 194
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 131
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 185
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 133
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 187
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 137
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 191
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 131
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 185
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 141
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 195
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 132
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIK------WTAPEAINYG 186
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 131
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 185
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 126
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 180
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERMN---YV 126
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK------WTAPEAALYG 180
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 129
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 183
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 302
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 356
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 302
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 356
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 112/216 (51%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGE-------DEFKMEVELLGRLRSPYLL 144
+G GGFGLV++G L + V AIK + +GE EF+ EV ++ L P ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + ++ V +++ G L L A + W +LR+ L+ A G+E++
Sbjct: 87 KLYGLMHNPPRM-VMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 205 EHCSPPVIHRDFKSSNILL---DKN--FHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+PP++HRD +S NI L D+N AKV+DFGL++ H + +LG ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWM 193
Query: 260 APEY--ALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE A T K+D YS+ ++L +LTG P D
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 146
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 202
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 127
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HR+ +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIK------WTAPEAINYG 181
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 127
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 181
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 149
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 205
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 148
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 204
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 148
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 204
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 125
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 179
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 153
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 209
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 149
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT-GAKLPVKWM 205
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 243
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG++F
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKF 207
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT-GAKLPVKWM 263
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 301
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERMN---YV 385
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 439
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G+G FG V+ G + KVAIK + + G + F E +++ +L+ L+ L S+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM G L + L G A KL + +A + A G+ ++ I
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGR---ALKLP--NLVDMAAQVAAGMAYIERMN---YI 127
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +S+NIL+ K++DFGLA++ D + G + + APE AL G
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIK------WTAPEAALYG 181
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL+T GRVP
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 302
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 356
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 117/218 (53%), Gaps = 22/218 (10%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 147
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYV 259
L S +HRD + N +LD+ F KV+DFGLA+ DK V + G + ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT-GAKLPVKWM 203
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
A E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G G V+ G + KVA+K + Q G D F E L+ +L+ L+ L +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ +YM NG L + L +G +KL L +A + A+G+ F+ E I
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YI 131
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ K++DFGLA++ D + G + + APE G
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIK------WTAPEAINYG 185
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L E++T GR+P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM G L + L G +L + ++ + A G+ ++ +
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVERM---NYV 133
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIK------WTAPEAALYG 187
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM G L + L G +L + ++ + A G+ ++ +
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVERMN---YV 133
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 187
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ ++R L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGE-------DEFKMEVELLGRLRSPYLL 144
+G GGFGLV++G L + V AIK + +GE EF+ EV ++ L P ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + ++ V +++ G L L A + W +LR+ L+ A G+E++
Sbjct: 87 KLYGLMHNPPRM-VMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 205 EHCSPPVIHRDFKSSNILL---DKN--FHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+PP++HRD +S NI L D+N AKV+DFG + + H + +LG ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWM 193
Query: 260 APEY--ALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE A T K+D YS+ ++L +LTG P D
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 136
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD ++NIL+ +N KV+DFGLA++ D + G + + APE AL G
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK------WTAPEAALYG 190
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 148
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 140
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 145
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 239
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 111/216 (51%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGE-------DEFKMEVELLGRLRSPYLL 144
+G GGFGLV++G L + V AIK + +GE EF+ EV ++ L P ++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + ++ V +++ G L L A + W +LR+ L+ A G+E++
Sbjct: 87 KLYGLMHNPPRM-VMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 205 EHCSPPVIHRDFKSSNILL---DKN--FHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+PP++HRD +S NI L D+N AKV+DF L++ H + +LG ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWM 193
Query: 260 APEY--ALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE A T K+D YS+ ++L +LTG P D
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 148
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 242
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 147
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 241
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 166
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 143
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 167
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 261
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 20/217 (9%)
Query: 90 SNVVGHGGFGLVYRGVL--SNGRKV--AIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLL 144
+ V+G G FG VY G L ++G+K+ A+K +++ GE +F E ++ P +L
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+LLG C S+ L+V YM +G L+ + + +V + + L+ AKG+++
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF------GLQVAKGMKY 146
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA--GGHVSTRVLGTQGYVA 260
L S +HRD + N +LD+ F KV+DFGLA+ DK H T ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP--IDVN 295
E T TTKSDV+S+GV+L EL+T P DVN
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 240
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 105/205 (51%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G + +VAIK + + G + F E +++ +LR L+ L S+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
+V +YM+ G L + L G +L + +A + A G+ ++ +
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVERM---NYV 303
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ +N KV+DFGL ++ D + G + + APE AL G
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIK------WTAPEAALYG 357
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L EL T GRVP
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 39/280 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K +G G FG V++G+ + +KV AIK++D + + ++ + E+ +L + SPY+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
G Y D + ++ +Y+ G + L P LD ET++ L E KGL++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--------PLD-ETQIATILREILKGLDY 119
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH S IHRD K++N+LL ++ K++DFG+A +D +GT ++APE
Sbjct: 120 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE 174
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMD 322
+K+D++S G+ +EL G P P L+ P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 221
Query: 323 PALEGQYS--MKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
P LEG YS +KE ++ C+ E +RP ++++
Sbjct: 222 PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 39/280 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K +G G FG V++G+ + +KV AIK++D + + ++ + E+ +L + SPY+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
G Y D + ++ +Y+ G + L P LD ET++ L E KGL++
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--------PLD-ETQIATILREILKGLDY 119
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH S IHRD K++N+LL ++ K++DFG+A +D +GT ++APE
Sbjct: 120 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPE 174
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMD 322
+K+D++S G+ +EL G P P L+ P
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 221
Query: 323 PALEGQYS--MKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
P LEG YS +KE ++ C+ E +RP ++++
Sbjct: 222 PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 39/280 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K +G G FG V++G+ + +KV AIK++D + + ++ + E+ +L + SPY+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
G Y D + ++ +Y+ G + L P LD ET++ L E KGL++
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--------PLD-ETQIATILREILKGLDY 134
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH S IHRD K++N+LL ++ K++DFG+A +D +GT ++APE
Sbjct: 135 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPE 189
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMD 322
+K+D++S G+ +EL G P P L+ P
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 236
Query: 323 PALEGQYS--MKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
P LEG YS +KE ++ C+ E +RP ++++
Sbjct: 237 PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 39/280 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K +G G FG V++G+ + +KV AIK++D + + ++ + E+ +L + SPY+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
G Y D + ++ +Y+ G + L P LD ET++ L E KGL++
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPG--------PLD-ETQIATILREILKGLDY 139
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
LH S IHRD K++N+LL ++ K++DFG+A +D +GT ++APE
Sbjct: 140 LH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPE 194
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMD 322
+K+D++S G+ +EL G P P L+ P
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP------------- 241
Query: 323 PALEGQYS--MKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
P LEG YS +KE ++ C+ E +RP ++++
Sbjct: 242 PTLEGNYSKPLKEFVEA------CLNKEPSFRPTAKELLK 275
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 15/205 (7%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VA+K++ + G EDEF E + + +L P L+ G CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ +V +Y++NG L +L ++G S+L L + + +G+ FL H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQL-----LEMCYDVCEGMAFLESH---QF 125
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
IHRD + N L+D++ KVSDFG+ + + D+ V T+ + APE +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHYFKYS 183
Query: 271 TKSDVYSYGVVLLELLT-GRVPIDV 294
+KSDV+++G+++ E+ + G++P D+
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDL 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ + KVA+K M + G + F E ++ L+ L+ L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ ++MA G L + L GS KL + + + A+G+ F+ + I
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YI 133
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ + K++DFGLA++ D + G + + APE G
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAINFG 187
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L+E++T GR+P
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 21/200 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ + KVA+K M + G + F E ++ L+ L+ L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ ++MA G L + L GS KL + + + A+G+ F+ + I
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YI 300
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTK 272
HRD +++NIL+ + K++DFGLA++G+ + APE G T K
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIK 349
Query: 273 SDVYSYGVVLLELLT-GRVP 291
SDV+S+G++L+E++T GR+P
Sbjct: 350 SDVWSFGILLMEIVTYGRIP 369
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ + KVA+K M + G + F E ++ L+ L+ L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 153 RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVI 212
++ ++MA G L + L GS KL + + + A+G+ F+ + I
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YI 306
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALTG 267
HRD +++NIL+ + K++DFGLA++ D + G + + APE G
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAINFG 360
Query: 268 HLTTKSDVYSYGVVLLELLT-GRVP 291
T KSDV+S+G++L+E++T GR+P
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 32/233 (13%)
Query: 67 TTDNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGV-LSNGRKV----AIKLMDQA- 120
T N Q+ K+ + V+G G FG VY+G+ + G V AIK++++
Sbjct: 25 TAPNQAQLRILKETE-----LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 121 GKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSV 180
G + EF E ++ + P+L+ LLG C LV M +G L E+++ +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS 139
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI- 239
L+W ++ AKG+ +L E ++HRD + N+L+ H K++DFGLA++
Sbjct: 140 QLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLL 190
Query: 240 -GSDKA----GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
G +K GG + + ++A E T +SDV+SYGV + EL+T
Sbjct: 191 EGDEKEYNADGGKMPIK------WMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 112/237 (47%), Gaps = 19/237 (8%)
Query: 87 FSKSNVVGHGGFGLVYRG-VLSNGRKVAIKLMDQAG--KQGE-DEFKMEVELLGRLRSPY 142
F N++G G F VYR + G +VAIK++D+ K G + EV++ +L+ P
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+L L Y D + LV + NG + +L N V + E R + G+
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEAR-HFMHQIITGML 126
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH H ++HRD SN+LL +N + K++DFGLA H + + GT Y++P
Sbjct: 127 YLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISP 181
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID---VNKPSGEGVLVSWALPRLTDRE 315
E A +SDV+S G + LL GR P D V + VL + +P E
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIE 238
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 108/213 (50%), Gaps = 27/213 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKV----AIKLMDQA-GKQGEDEFKMEVELLGRLRS 140
+ V+G G FG VY+G+ + G V AIK++++ G + EF E ++ +
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P+L+ LLG C LV M +G L E+++ + L+W ++ AKG+
Sbjct: 77 PHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI--GSDKA----GGHVSTRVLG 254
+L E ++HRD + N+L+ H K++DFGLA++ G +K GG + +
Sbjct: 131 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++A E T +SDV+SYGV + EL+T
Sbjct: 185 ---WMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 140/297 (47%), Gaps = 51/297 (17%)
Query: 88 SKSNVVGHGGFGLVYRGVL--SNGRK---VAIKLMDQAG---KQGEDEFKMEVELLGRLR 139
++ V+G G FG VY+G+L S+G+K VAIK + +AG KQ D F E ++G+
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGYTEKQRVD-FLGEAGIMGQFS 104
Query: 140 SPYLLALLGYCSDRRKLLVY-DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
++ L G S + +++ +YM NG L + L +G SV L LR A
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV---LQLVGMLR---GIAA 158
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-------KAGGHVSTR 251
G+++L + +HRD + NIL++ N KVSDFGL+++ D +GG + R
Sbjct: 159 GMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGVLVSWALPR 310
+ APE T+ SDV+S+G+V+ E++T G P W L
Sbjct: 216 ------WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY-------------WEL-- 254
Query: 311 LTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
++++ ++ M + + C Q E RP AD+V L L++
Sbjct: 255 --SNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 38/291 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K + +G G FG VY+G+ ++ ++V AIK++D + + ++ + E+ +L + SPY+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G Y + ++ +Y+ G + L P + + T LR E KGL++L
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILR---EILKGLDYL 132
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
H S IHRD K++N+LL + K++DFG+A +D +GT ++APE
Sbjct: 133 H---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEV 187
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDP 323
K+D++S G+ +EL G P P + V + +P+ + P
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP----MRVLFLIPKNS---------PP 234
Query: 324 ALEGQYS--MKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRST 372
LEGQ+S KE ++ C+ + +RP ++++ + +Y + T
Sbjct: 235 TLEGQHSKPFKEFVEA------CLNKDPRFRPTAKELLKHKF-ITRYTKKT 278
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKV----AIKLM-DQAGKQGEDEFKMEVELLGRLRS 140
K V+G G FG VY+G+ + +G V AIK++ + + E E ++ + S
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
PY+ LLG C LV M G L +H+ G L+W ++ AKG+
Sbjct: 79 PYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLA+ + D+ GG V +
Sbjct: 133 SYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 116/226 (51%), Gaps = 24/226 (10%)
Query: 78 KQLHSA---TGGFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGED---EFKM 130
KQ H G + + +G G FG V G G KVA+K++++ + D + +
Sbjct: 6 KQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR 65
Query: 131 EVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
E++ L R P+++ L S + +V +Y++ G L +++ NG +LD +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYIC-KNG------RLDEKES 118
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
R+ + G+++ H H V+HRD K N+LLD + +AK++DFGL+ + SD G
Sbjct: 119 RRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFL 172
Query: 250 TRVLGTQGYVAPEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
G+ Y APE ++G L + D++S GV+L LL G +P D
Sbjct: 173 RXSCGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 27/215 (12%)
Query: 91 NVVGHGGFGLVYRG-VLSNGRKV--AIKLMDQ-AGKQGEDEFKMEVELLGRL-RSPYLLA 145
+V+G G FG V + + +G ++ AIK M + A K +F E+E+L +L P ++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLY--------PANG-SNSVASKLDWETRLRIALE 195
LLG C R L L +Y +G L + L PA +NS AS L + L A +
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTRV 252
A+G+++L + IHRD + NIL+ +N+ AK++DFGL++ + K G + R
Sbjct: 141 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 197
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ + Y TT SDV+SYGV+L E+++
Sbjct: 198 MAIESLNYSVY------TTNSDVWSYGVLLWEIVS 226
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 27/215 (12%)
Query: 91 NVVGHGGFGLVYRG-VLSNGRKV--AIKLMDQ-AGKQGEDEFKMEVELLGRL-RSPYLLA 145
+V+G G FG V + + +G ++ AIK M + A K +F E+E+L +L P ++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLY--------PANG-SNSVASKLDWETRLRIALE 195
LLG C R L L +Y +G L + L PA +NS AS L + L A +
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTRV 252
A+G+++L + IHRD + NIL+ +N+ AK++DFGL++ + K G + R
Sbjct: 151 VARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 207
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ + Y TT SDV+SYGV+L E+++
Sbjct: 208 MAIESLNYSVY------TTNSDVWSYGVLLWEIVS 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 22/206 (10%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G +N KVA+K + + G F E L+ L+ L+ L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ ++ +YMA G L + L G + KL + + + A+G+ ++
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERKN---Y 131
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALT 266
IHRD +++N+L+ ++ K++DFGLA++ D + G + + APE
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAINF 185
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
G T KSDV+S+G++L E++T G++P
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 164
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 165 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 218
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 219 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 185
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 186 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 188 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 140
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 141 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 194
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 195 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 78 PHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 131
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 132 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 185
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 186 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 188
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 189 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
VVG G FG+V + + VAIK ++ ++ F +E+ L R+ P ++ L G C
Sbjct: 15 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 152 DRRKLLVYDYMANGGLQEHLYPANG--SNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ LV +Y G L L+ A + A + W L+ ++G+ +LH
Sbjct: 72 NP-VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 124
Query: 210 PVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGH 268
+IHRD K N+LL K+ DFG A D + + G+ ++APE +
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK--GSAAWMAPEVFEGSN 179
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQ 328
+ K DV+S+G++L E++T R P D + G + WA+ T I + P
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKP----- 232
Query: 329 YSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKY 368
+ ++ C + RP M ++V+ + L++Y
Sbjct: 233 --------IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 156 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 209
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 210 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 27/215 (12%)
Query: 91 NVVGHGGFGLVYRG-VLSNGRKV--AIKLMDQ-AGKQGEDEFKMEVELLGRL-RSPYLLA 145
+V+G G FG V + + +G ++ AIK M + A K +F E+E+L +L P ++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLY--------PANG-SNSVASKLDWETRLRIALE 195
LLG C R L L +Y +G L + L PA +NS AS L + L A +
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTRV 252
A+G+++L + IHR+ + NIL+ +N+ AK++DFGL++ + K G + R
Sbjct: 148 VARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW 204
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ + Y TT SDV+SYGV+L E+++
Sbjct: 205 MAIESLNYSVY------TTNSDVWSYGVLLWEIVS 233
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 124
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 125 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 178
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 179 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 188 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 192 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 188 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 134 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 187
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 188 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 132/282 (46%), Gaps = 36/282 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 76 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS 184
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + L R P L
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR------------PHLAS 232
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYN 369
+ +V I C +AD RP ++ +++ ++ N
Sbjct: 233 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVMDEN 267
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 126/280 (45%), Gaps = 33/280 (11%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
VVG G FG+V + + VAIK ++ ++ F +E+ L R+ P ++ L G C
Sbjct: 16 VVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 152 DRRKLLVYDYMANGGLQEHLYPANGSN--SVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ LV +Y G L L+ A + A + W L+ ++G+ +LH
Sbjct: 73 NP-VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 125
Query: 210 PVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGH 268
+IHRD K N+LL K+ DFG A D + + G+ ++APE +
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTA---CDIQTHMTNNK--GSAAWMAPEVFEGSN 180
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQ 328
+ K DV+S+G++L E++T R P D + G + WA+ T I + P
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPFD--EIGGPAFRIMWAVHNGTRPPLIKNLPKP----- 233
Query: 329 YSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKY 368
+ ++ C + RP M ++V+ + L++Y
Sbjct: 234 --------IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 136
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 137 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 190
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 191 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 93 VGHGGFGLVYRGVLSN------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V+ N VA+K + +A + +F+ E ELL L+ +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 147 LGYCSDRRKLL-VYDYMANGGLQEHLYP--------ANGSNSVASKLDWETRLRIALEAA 197
G C++ R LL V++YM +G L L A G + L L +A + A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
G+ +L +HRD + N L+ + K+ DFG+++ V R +
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
++ PE L TT+SDV+S+GVVL E+ T G+ P
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 93 VGHGGFGLVYRGVLSN------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V+ N VA+K + +A + +F+ E ELL L+ +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 147 LGYCSDRRKLL-VYDYMANGGLQEHLYP--------ANGSNSVASKLDWETRLRIALEAA 197
G C++ R LL V++YM +G L L A G + L L +A + A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
G+ +L +HRD + N L+ + K+ DFG+++ V R +
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
++ PE L TT+SDV+S+GVVL E+ T G+ P
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 71 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS 179
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + L R P L
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR------------PHLAS 227
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 228 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 259
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 93 VGHGGFGLVYRGVLSN------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V+ N VA+K + +A + +F+ E ELL L+ +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 147 LGYCSDRRKLL-VYDYMANGGLQEHLYP--------ANGSNSVASKLDWETRLRIALEAA 197
G C++ R LL V++YM +G L L A G + L L +A + A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
G+ +L +HRD + N L+ + K+ DFG+++ V R +
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
++ PE L TT+SDV+S+GVVL E+ T G+ P
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 75 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS 183
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + L R P L
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR------------PHLAS 231
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 232 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 22/212 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F +G G FG V+ NGR A+K++ + KQ E E +L + P
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVTHP 66
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+++ + G D +++ ++ DY+ G L L + + +K A E L
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAEVCLAL 119
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K NILLDKN H K++DFG AK D V+ + GT Y+A
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIA 171
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE T D +S+G+++ E+L G P
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 36/279 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 82 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS 190
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + L R P L
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR------------PHLAS 238
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 239 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 270
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 91 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSKFS 199
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + + L + P L
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI------------AQGLRLYRPHLAS 247
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 248 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L PA +N V +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 52/284 (18%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG V+ G +N KVA+K + + G F E L+ L+ L+ L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ ++ ++MA G L + L G + KL + + + A+G+ ++
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NY 130
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-----KAGGHVSTRVLGTQGYVAPEYALT 266
IHRD +++N+L+ ++ K++DFGLA++ D + G + + APE
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK------WTAPEAINF 184
Query: 267 GHLTTKSDVYSYGVVLLELLT-------GRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
G T KS+V+S+G++L E++T GR DV +G + +PR+ + E
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG----YRMPRMENCPD--E 238
Query: 320 IMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLV 363
+ D I MC + +A+ RP D +QS++
Sbjct: 239 LYD-----------------IMKMCWKEKAEERPTF-DYLQSVL 264
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 134/281 (47%), Gaps = 40/281 (14%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 76 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTGH 268
+HRD + N L++ KVSDFGL++ D + S+R G++ + PE +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--YTSSR--GSKFPVRWSPPEVLMYSK 182
Query: 269 LTTKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPAL 325
++KSD++++GV++ E+ + G++P + N + E + + L + P L
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI------------AQGLRLYRPHL 230
Query: 326 EGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 231 ASE-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 264
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 93 VGHGGFGLVYRGVLSNGRK---VAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLLALLG 148
+G G FG V +GV +K VAIK++ Q ++ + E M E +++ +L +PY++ L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
C +LV + G L + L V++ + + + + G+++L E
Sbjct: 78 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE------LLHQVSMGMKYLEEK-- 129
Query: 209 PPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQ--GYVAPEYAL 265
+HRD + N+LL +AK+SDFGL+K +G+D + + + R G + APE
Sbjct: 130 -NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECIN 186
Query: 266 TGHLTTKSDVYSYGVVLLELLT-GRVP 291
+++SDV+SYGV + E L+ G+ P
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 132/279 (47%), Gaps = 36/279 (12%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD 152
+G G FG+V G VAIK++ + G EDEF E +++ L L+ L G C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 153 RRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+R + ++ +YMANG L +L + + + L + + + +E+L S
Sbjct: 91 QRPIFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 141
Query: 212 IHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLT 270
+HRD + N L++ KVSDFGL++ + D+ V ++ + PE + +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSKFS 199
Query: 271 TKSDVYSYGVVLLELLT-GRVPID--VNKPSGEGVLVSWALPRLTDREKILEIMDPALEG 327
+KSD++++GV++ E+ + G++P + N + E + + L + P L
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI------------AQGLRLYRPHLAS 247
Query: 328 QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLV 366
+ +V I C +AD RP ++ +++ ++
Sbjct: 248 E-------KVYTIMYSCWHEKADERPTFKILLSNILDVM 279
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L PA +N V +
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ A+G+
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGM 127
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 128 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 181
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 182 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 93 VGHGGFGLVYRGVLSN------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V+ N VA+K + A +F E ELL L+ +++
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 147 LGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV-------ASKLDWETRLRIALEAAK 198
G C + L +V++YM +G L + L A+G ++V ++L L IA + A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLR-AHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSD--KAGGHVSTRVLG 254
G+ +L S +HRD + N L+ +N K+ DFG+++ +D + GGH +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI-- 194
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
++ PE + TT+SDV+S GVVL E+ T G+ P
Sbjct: 195 --RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+ G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+ G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 192 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 81 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 134
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 135 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 188
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 189 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 130
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 131 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 184
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 185 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+ G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFGLAK +G+++ GG V +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 192 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 132
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 133 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 186
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 187 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 92 VVGHGGFGLVYRG----VLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR-LRSPYLLAL 146
V+G G FG+VY G N + AIK + + + + E + LL R L P +LAL
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 147 LGYCSDRRKL--LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G L ++ YM +G L + + + +V + + L+ A+G+E+L
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF------GLQVARGMEYLA 141
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDK----AGGHVSTRVLGTQGYVA 260
E +HRD + N +LD++F KV+DFGLA+ D+ H R+ + A
Sbjct: 142 EQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PVKWTA 196
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVP 291
E T TTKSDV+S+GV+L ELLT P
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAI-----KLMDQAGKQGEDEFKMEVELLGRLRS 140
F K V+G G FG VY+G+ + G KV I +L + + E E ++ + +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P++ LLG C L+ M G L +++ + L+W ++ AKG+
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGM 137
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKA-----GGHVSTRVLG 254
+L + ++HRD + N+L+ H K++DFG AK +G+++ GG V +
Sbjct: 138 NYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK--- 191
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPID 293
++A E L T +SDV+SYGV + EL+T G P D
Sbjct: 192 ---WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 36/224 (16%)
Query: 93 VGHGGFGLVYR----GVLS--NGRKVAIKLM-DQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG V++ G+L VA+K++ ++A + +F+ E L+ +P ++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVA-SKLDWETRLR------------ 191
LLG C+ + + L+++YMA G L E L + + S D TR R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 192 ----IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSD--K 243
IA + A G+ +L E +HRD + N L+ +N K++DFGL++ +D K
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 244 AGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
A G+ + + ++ PE TT+SDV++YGVVL E+ +
Sbjct: 232 ADGNDAIPI----RWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
VF + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED-EFKMEVELLGRLR 139
+ S +G G FG+VY GV K VAIK +++A E EF E ++
Sbjct: 12 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 71
Query: 140 SPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALE 195
+++ LLG S + L++ + M G L+ +L P +N V + +++A E
Sbjct: 72 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGT 255
A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + + + L
Sbjct: 132 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 256 QGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+++PE G TT SDV+S+GVVL E+ T
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 92 VVGHGGFGLVYRGVL-SNGRK---VAIKLMDQA-GKQGEDEFKMEVELLGRLRSPYLLAL 146
V+G G FG V RG L + G+K VAIK + ++ EF E ++G+ P ++ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 147 LGYCSDRRKLLVY-DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
G ++ +++ ++M NG L L +G +V + + A G+ +L E
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------MLRGIASGMRYLAE 136
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPE 262
+HRD + NIL++ N KVSDFGL++ + + T LG + + APE
Sbjct: 137 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 263 YALTGHLTTKSDVYSYGVVLLELLT 287
T+ SD +SYG+V+ E+++
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQAG---KQGED---EFKMEV 132
+H FS ++G GGFG VY ++ G+ A+K +D+ KQGE ++ +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 133 ELLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
L+ P+++ + + + + + D M G L HL + V S+ D +R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD----MR 295
Query: 192 I-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GLE +H V++RD K +NILLD++ H ++SD GLA K H S
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS- 350
Query: 251 RVLGTQGYVAPEYALTG-HLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
+GT GY+APE G + +D +S G +L +LL G P +K
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQAG---KQGED---EFKMEV 132
+H FS ++G GGFG VY ++ G+ A+K +D+ KQGE ++ +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 133 ELLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
L+ P+++ + + + + + D M G L HL + V S+ D +R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD----MR 295
Query: 192 I-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GLE +H V++RD K +NILLD++ H ++SD GLA K H S
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS- 350
Query: 251 RVLGTQGYVAPEYALTG-HLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
+GT GY+APE G + +D +S G +L +LL G P +K
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 92 VVGHGGFGLVYRGVL-SNGRK---VAIKLMDQA-GKQGEDEFKMEVELLGRLRSPYLLAL 146
V+G G FG V RG L + G+K VAIK + ++ EF E ++G+ P ++ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 147 LGYCSDRRKLLVY-DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
G ++ +++ ++M NG L L +G +V + + A G+ +L E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVG------MLRGIASGMRYLAE 134
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPE 262
+HRD + NIL++ N KVSDFGL++ + + T LG + + APE
Sbjct: 135 MS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 263 YALTGHLTTKSDVYSYGVVLLELLT 287
T+ SD +SYG+V+ E+++
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQAG---KQGED---EFKMEV 132
+H FS ++G GGFG VY ++ G+ A+K +D+ KQGE ++ +
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 133 ELLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
L+ P+++ + + + + + D M G L HL + V S+ D +R
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD----MR 295
Query: 192 I-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GLE +H V++RD K +NILLD++ H ++SD GLA K H S
Sbjct: 296 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS- 350
Query: 251 RVLGTQGYVAPEYALTG-HLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
+GT GY+APE G + +D +S G +L +LL G P +K
Sbjct: 351 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 395
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 124
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 125 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 123
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 124 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 25/227 (11%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQAG---KQGED---EFKMEV 132
+H FS ++G GGFG VY ++ G+ A+K +D+ KQGE ++ +
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 133 ELLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
L+ P+++ + + + + + D M G L HL + V S+ D +R
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEAD----MR 294
Query: 192 I-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GLE +H V++RD K +NILLD++ H ++SD GLA K H S
Sbjct: 295 FYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS- 349
Query: 251 RVLGTQGYVAPEYALTG-HLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
+GT GY+APE G + +D +S G +L +LL G P +K
Sbjct: 350 --VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK 394
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E + SD+++ G ++ +L+ G P
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 121
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 122 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 122
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 123 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLM-----DQAGKQGEDEFKMEVELLGRLRS 140
K V+G G FG V++GV + G + I + D++G+Q + +G L
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+++ LLG C LV Y+ G L +H+ G+ L+W ++ AKG+
Sbjct: 93 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGM 146
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
+L EH ++HR+ + N+LL +V+DFG+A + + + ++A
Sbjct: 147 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLT 287
E G T +SDV+SYGV + EL+T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G FG VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 129
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKF 187
Query: 270 TTKSDVYSYGVVLLELLT-GRVPIDVNKPS 298
+ KSDV+++GV+L E+ T G P PS
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRGVL------SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+G FG VY+G L + VAIK L D+A +EF+ E L RL+ P ++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLY---------PANGSNSVASKLDWETRLRIALE 195
LLG + + L +++ Y ++G L E L + +V S L+ + + +
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGT 255
A G+E+L H V+H+D + N+L+ + K+SD GL + + ++LG
Sbjct: 137 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLGN 189
Query: 256 Q----GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE + G + SD++SYGVVL E+ +
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRGVL------SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+G FG VY+G L + VAIK L D+A +EF+ E L RL+ P ++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 146 LLGYCSDRRKL-LVYDYMANGGLQEHLY---------PANGSNSVASKLDWETRLRIALE 195
LLG + + L +++ Y ++G L E L + +V S L+ + + +
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGT 255
A G+E+L H V+H+D + N+L+ + K+SD GL + + ++LG
Sbjct: 154 IAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLGN 206
Query: 256 Q----GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE + G + SD++SYGVVL E+ +
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLM-----DQAGKQGEDEFKMEVELLGRLRS 140
K V+G G FG V++GV + G + I + D++G+Q + +G L
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+++ LLG C LV Y+ G L +H+ G+ L+W ++ AKG+
Sbjct: 75 AHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGM 128
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
+L EH ++HR+ + N+LL +V+DFG+A + + + ++A
Sbjct: 129 YYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLT 287
E G T +SDV+SYGV + EL+T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 128
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 129 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 186 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 151
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 152 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 144
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 143
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 18/202 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRK---VAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLLALLG 148
+G G FG V +GV +K VAIK++ Q ++ + E M E +++ +L +PY++ L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
C +LV + G L + L V++ + + + + G+++L E
Sbjct: 404 VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAE------LLHQVSMGMKYLEEK-- 455
Query: 209 PPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQG--YVAPEYAL 265
+HR+ + N+LL +AK+SDFGL+K +G+D + + + R G + APE
Sbjct: 456 -NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS--YYTARSAGKWPLKWYAPECIN 512
Query: 266 TGHLTTKSDVYSYGVVLLELLT 287
+++SDV+SYGV + E L+
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALS 534
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 144
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 147
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 148 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 143
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 144 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 147
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 148 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 144
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
FS +GHG FG VY + N VAIK M +GKQ ++++ EV L +LR P
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 143 LLALLG-YCSDRRKLLVYDYM---ANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
+ G Y + LV +Y A+ L+ H P A + A +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA----------VTHGALQ 126
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
GL +LH H +IHRD K+ NILL + K+ DFG A I + + +GT +
Sbjct: 127 GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYW 177
Query: 259 VAPEYALT---GHLTTKSDVYSYGVVLLELLTGRVPI 292
+APE L G K DV+S G+ +EL + P+
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
E SD+++ G ++ +L+ G P + EG++ +
Sbjct: 204 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF---RAGNEGLIFA 244
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 149
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 150 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 207 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 93 VGHGGFGLVYRGVLSN------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V+ N VA+K + +F+ E ELL L+ +++
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 147 LGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVA----------SKLDWETRLRIALE 195
G C D L +V++YM +G L + L A+G +++ +L L IA +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLR-AHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSD--KAGGHVSTR 251
A G+ +L S +HRD + N L+ N K+ DFG+++ +D + GGH
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
+ ++ PE + TT+SDV+S+GV+L E+ T G+ P
Sbjct: 199 I----RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 100/217 (46%), Gaps = 30/217 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
FS +GHG FG VY + N VAIK M +GKQ ++++ EV L +LR P
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 143 LLALLG-YCSDRRKLLVYDYM---ANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
+ G Y + LV +Y A+ L+ H P A + A +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA----------VTHGALQ 165
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
GL +LH H +IHRD K+ NILL + K+ DFG A I + + +GT +
Sbjct: 166 GLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYW 216
Query: 259 VAPEYALT---GHLTTKSDVYSYGVVLLELLTGRVPI 292
+APE L G K DV+S G+ +EL + P+
Sbjct: 217 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 18/224 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F +V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 147 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
E SD+++ G ++ +L+ G P + EG++ +
Sbjct: 204 ELLTEKSAXKSSDLWALGCIIYQLVAGLPPF---RAGNEGLIFA 244
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 129
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKF 187
Query: 270 TTKSDVYSYGVVLLELLT-GRVPIDVNKPS 298
+ KSDV+++GV+L E+ T G P PS
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 108/225 (48%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGED---EFKMEVELLGRLRS 140
G + + +G G FG V G G KVA+K++++ + D + K E++ L R
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L S +V +Y++ G L +++ + ++ R+ +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSA 123
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H H V+HRD K N+LLD + +AK++DFGL+ + SD G G+ Y
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRTSCGSPNYA 177
Query: 260 APEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
APE ++G L + D++S GV+L LL G +P D
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 15/211 (7%)
Query: 87 FSKSNVVGHGGFGL-VYRGVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPY 142
F ++G G F V L+ R+ AIK++++ E++ E +++ RL P+
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 143 LLALLGYCSDRRKLLV-YDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+ L D KL Y NG L +++ + S + TR A E LE
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYI------RKIGSFDETCTRFYTA-EIVSALE 144
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH +IHRD K NILL+++ H +++DFG AK+ S ++ + +GT YV+P
Sbjct: 145 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E SD+++ G ++ +L+ G P
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED-EFKMEVELLGRLR 139
+ S +G G FG+VY GV K VAIK +++A E EF E ++
Sbjct: 14 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 73
Query: 140 SPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALE 195
+++ LLG S + L++ + M G L+ +L P +N V + +++A E
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGT 255
A G+ +L+ + +HRD + N ++ ++F K+ DFG+ + + + L
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 256 QGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+++PE G TT SDV+S+GVVL E+ T
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 41/237 (17%)
Query: 75 FTFKQLHSATGGFSKS---------NVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAG 121
FTF+ + A F+K V+G G FG V G L K VAIK + +AG
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAG 68
Query: 122 ---KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGS 177
KQ D F E ++G+ P ++ L G + + +++ +YM NG L L +G
Sbjct: 69 YTDKQRRD-FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR 127
Query: 178 NSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA 237
+V + + G+++L + + +HRD + NIL++ N KVSDFG++
Sbjct: 128 FTVIQLVG------MLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMS 178
Query: 238 KIGSDKA-------GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ D GG + R + APE T+ SDV+SYG+V+ E+++
Sbjct: 179 RVLEDDPEAAYTTRGGKIPIR------WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 19/213 (8%)
Query: 87 FSKSNVVGHGGFGLVY--RGVL--SNGRKVAIKLMDQAGKQGEDEF--KMEVELLGRLRS 140
F V+G G FG V+ R V +G A+K++ +A + D KME ++L +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 141 PYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L + ++ + L+ D++ G L L S V + + + +A E A G
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFT-EEDVKFYLA-ELALG 142
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L+ LH S +I+RD K NILLD+ H K++DFGL+K D S GT Y+
Sbjct: 143 LDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEYM 197
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE + +D +SYGV++ E+LTG +P
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 21/216 (9%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGED---EFKMEVELLGRLRS 140
G + + +G G FG V G G KVA+K++++ + D + K E++ L R
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L S +V +Y++ G L +++ + ++ R+ +
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-------RLFQQILSA 123
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H H V+HRD K N+LLD + +AK++DFGL+ + SD G G+ Y
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD---GEFLRDSCGSPNYA 177
Query: 260 APEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
APE ++G L + D++S GV+L LL G +P D
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 85 GGFSKSNVVGHGGFG---LVYRGVLSNGRKVAIKLMDQ---AGKQGEDEFKMEVELLGRL 138
G + +G G FG L Y + G+KVA+K++++ A + + E+ L L
Sbjct: 14 GNYQIVKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 71
Query: 139 RSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
R P+++ L + ++++ A L +++ + K+ + R +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-------KMSEQEARRFFQQIIS 124
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
+E+ H H ++HRD K N+LLD++ + K++DFGL+ I +D G+ G+ Y
Sbjct: 125 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNY 178
Query: 259 VAPEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
APE ++G L + DV+S GV+L +L R+P D
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 84 TGGFSKSNVVGHGGFG---LVYRGVLSNGRKVAIKLMDQ---AGKQGEDEFKMEVELLGR 137
G + +G G FG L Y + G+KVA+K++++ A + + E+ L
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 138 LRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
LR P+++ L + ++++ A L +++ + K+ + R +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-------KMSEQEARRFFQQII 113
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+E+ H H ++HRD K N+LLD++ + K++DFGL+ I +D G+ G+
Sbjct: 114 SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPN 167
Query: 258 YVAPEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
Y APE ++G L + DV+S GV+L +L R+P D
Sbjct: 168 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 132
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKF 190
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 191 SIKSDVWAFGVLLWEIAT 208
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 28/282 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+++ +G G G VY + ++ G++VAI+ M+ + ++ E+ ++ ++P ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y +V +Y+A G L + + + +D + E + LEFLH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEY 263
S VIHRD KS NILL + K++DFG A+I +++ + ++GT ++APE
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEV 187
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP-IDVNKPSGEGVLVSWALPRLTDREKILEI-- 320
K D++S G++ +E++ G P ++ N ++ + P L + EK+ I
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 321 ------MDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
+D +E + S KE++Q + +P + PL+A
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK--IAKPLSSLTPLIA 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 75 FTFKQLHSATGGFSKS---------NVVGHGGFGLVYRGVLS-NGRK---VAIKLMDQ-- 119
FTF+ + A F+K V+G G FG V G L G++ VAIK +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 120 AGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSN 178
KQ D F E ++G+ P ++ L G + +++ ++M NG L L +G
Sbjct: 74 TEKQRRD-FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 132
Query: 179 SVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK 238
+V + LR A G+++L + +HRD + NIL++ N KVSDFGL++
Sbjct: 133 TVIQLVG---MLR---GIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSR 183
Query: 239 IGSDKAGGHVSTRVLGTQ---GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
D T LG + + APE T+ SDV+SYG+V+ E+++
Sbjct: 184 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L + A ++D L+ + KG+E+L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QAHAERIDHIKLLQYTSQICKGMEYL- 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 74 VFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK------VAIKLMDQAGKQGED- 126
V+ + A + S +G G FG+VY GV K VAIK +++A E
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 127 EFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVAS 182
EF E ++ +++ LLG S + L++ + M G L+ +L P +N V +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+++A E A G+ +L+ + +HRD + N + ++F K+ DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ L +++PE G TT SDV+S+GVVL E+ T
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 85 GGFSKSNVVGHGGFG---LVYRGVLSNGRKVAIKLMDQ---AGKQGEDEFKMEVELLGRL 138
G + +G G FG L Y + G+KVA+K++++ A + + E+ L L
Sbjct: 13 GNYQIVKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 70
Query: 139 RSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
R P+++ L + ++++ A L +++ + K+ + R +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-------KMSEQEARRFFQQIIS 123
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
+E+ H H ++HRD K N+LLD++ + K++DFGL+ I +D G+ G+ Y
Sbjct: 124 AVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPNY 177
Query: 259 VAPEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
APE ++G L + DV+S GV+L +L R+P D
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 15/210 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 129
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPESLAYNKF 187
Query: 270 TTKSDVYSYGVVLLELLT-GRVPIDVNKPS 298
+ KSDV+++GV+L E+ T G P PS
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + +G + +F+ E+++L L S +++
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 148 G--YCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G Y R +L LV +Y+ +G L++ L ++LD L + + KG+E+L
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEY 263
S +HRD + NIL++ H K++DFGLAK+ DK V + APE
Sbjct: 129 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ +SDV+S+GVVL EL T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 84 TGGFSKSNVVGHGGFG---LVYRGVLSNGRKVAIKLMDQ---AGKQGEDEFKMEVELLGR 137
G + +G G FG L Y + G+KVA+K++++ A + + E+ L
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHT--TTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 138 LRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
LR P+++ L + ++++ A L +++ + K+ + R +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD-------KMSEQEARRFFQQII 117
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+E+ H H ++HRD K N+LLD++ + K++DFGL+ I +D G+ G+
Sbjct: 118 SAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---GNFLKTSCGSPN 171
Query: 258 YVAPEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
Y APE ++G L + DV+S GV+L +L R+P D
Sbjct: 172 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGEDEFK---MEVEL 134
Q+ F ++G G FG V+ + AIK + + +D+ + +E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 135 LG-RLRSPYLLALLGYCSDRRK---LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRL 190
L P+L + +C+ + K V +Y+ G L H+ K D
Sbjct: 72 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRAT 122
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GL+FLH S +++RD K NILLDK+ H K++DFG+ K + G +
Sbjct: 123 FYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTN 177
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT Y+APE L D +S+GV+L E+L G+ P
Sbjct: 178 EFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 28/282 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+++ +G G G VY + ++ G++VAI+ M+ + ++ E+ ++ ++P ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y +V +Y+A G L + + + +D + E + LEFLH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEY 263
S VIHRD KS NILL + K++DFG A+I +++ + ++GT ++APE
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEV 187
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP-IDVNKPSGEGVLVSWALPRLTDREKILEI-- 320
K D++S G++ +E++ G P ++ N ++ + P L + EK+ I
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 321 ------MDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
+D +E + S KE++Q + +P + PL+A
Sbjct: 248 DFLNRCLDMDVEKRGSAKELLQHQFLK--IAKPLSSLTPLIA 287
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 108/227 (47%), Gaps = 25/227 (11%)
Query: 80 LHSATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRL 138
L G F +VG+G +G VY+G + G+ AIK+MD G + E+E K E+ +L +
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKY 77
Query: 139 R-----SPYLLALLGYCS---DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRL 190
+ Y A + D + LV ++ G + + + N+ + L E
Sbjct: 78 SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI-----KNTKGNTLKEEWIA 132
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
I E +GL LH+H VIHRD K N+LL +N K+ DFG++ D+ G +T
Sbjct: 133 YICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA-QLDRTVGRRNT 188
Query: 251 RVLGTQGYVAPEYALT-----GHLTTKSDVYSYGVVLLELLTGRVPI 292
+GT ++APE KSD++S G+ +E+ G P+
Sbjct: 189 -FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 195 SIKSDVWAFGVLLWEIAT 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 135
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 193
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 194 SIKSDVWAFGVLLWEIAT 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 131
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 SIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 133
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 191
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 144
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 202
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 203 SIKSDVWAFGVLLWEIAT 220
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 28/282 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+++ +G G G VY + ++ G++VAI+ M+ + ++ E+ ++ ++P ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y +V +Y+A G L + + + +D + E + LEFLH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH 134
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEY 263
S VIHRD KS NILL + K++DFG A+I +++ + ++GT ++APE
Sbjct: 135 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEV 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP-IDVNKPSGEGVLVSWALPRLTDREKILEI-- 320
K D++S G++ +E++ G P ++ N ++ + P L + EK+ I
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 321 ------MDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
++ +E + S KE+IQ + +P + PL+A
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK--IAKPLSSLTPLIA 288
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 133
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 191
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 192 SIKSDVWAFGVLLWEIAT 209
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +YM G L ++L N A L L +A + + +E+L +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL-----LYMATQISSAMEYLEKK---N 150
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHRD + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 151 FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNTF 208
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 209 SIKSDVWAFGVLLWEIAT 226
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 91 NVVGHGGFGLVYRGVLSNGRKVAIKLM-DQAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G FG V G G KVA+K + + A Q F E ++ +LR L+ LLG
Sbjct: 199 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 254
Query: 150 CSDRRK--LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ + +V +YMA G L ++L + S L + L+ +L+ + +E+L +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYL-----RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 308
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ ++ AKVSDFGL K S + G + + + APE
Sbjct: 309 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 360
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
+TKSDV+S+G++L E+ + GRVP
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 91 NVVGHGGFGLVYRGVLSNGRKVAIKLM-DQAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G FG V G G KVA+K + + A Q F E ++ +LR L+ LLG
Sbjct: 18 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 73
Query: 150 CSDRRK--LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ + +V +YMA G L ++L + S L + L+ +L+ + +E+L +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYL-----RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 127
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ ++ AKVSDFGL K S + G + + + APE
Sbjct: 128 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 179
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
+TKSDV+S+G++L E+ + GRVP
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + +G + +F+ E+++L L S +++
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 148 G--YCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G Y R+ L LV +Y+ +G L++ L ++LD L + + KG+E+L
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEY 263
S +HRD + NIL++ H K++DFGLAK+ DK V + APE
Sbjct: 133 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ +SDV+S+GVVL EL T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + +G + +F+ E+++L L S +++
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 148 G--YCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G Y R+ L LV +Y+ +G L++ L ++LD L + + KG+E+L
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEY 263
S +HRD + NIL++ H K++DFGLAK+ DK V + APE
Sbjct: 132 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ +SDV+S+GVVL EL T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 22/222 (9%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGEDEFK---MEVEL 134
Q+ F ++G G FG V+ + AIK + + +D+ + +E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 135 LG-RLRSPYLLALLGYCSDRRK---LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRL 190
L P+L + +C+ + K V +Y+ G L H+ K D
Sbjct: 71 LSLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI-------QSCHKFDLSRAT 121
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E GL+FLH S +++RD K NILLDK+ H K++DFG+ K + G +
Sbjct: 122 FYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKTN 176
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT Y+APE L D +S+GV+L E+L G+ P
Sbjct: 177 XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 91 NVVGHGGFGLVYRGVLSNGRKVAIKLM-DQAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G FG V G G KVA+K + + A Q F E ++ +LR L+ LLG
Sbjct: 27 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 82
Query: 150 CSDRRK--LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ + +V +YMA G L ++L + S L + L+ +L+ + +E+L +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYL-----RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 136
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ ++ AKVSDFGL K S + G + + + APE
Sbjct: 137 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 188
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
+TKSDV+S+G++L E+ + GRVP
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 132
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTG 267
IHRD + N L+ +N KV+DFGL+++ + G T G + + APE
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMT----GDTYTAPAGAKFPIKWTAPESLAYN 188
Query: 268 HLTTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT 208
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 23/206 (11%)
Query: 91 NVVGHGGFGLVYRGVLSNGRKVAIKLM-DQAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G FG V G G KVA+K + + A Q F E ++ +LR L+ LLG
Sbjct: 12 QTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 67
Query: 150 CSDRRK--LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ + +V +YMA G L ++L + S L + L+ +L+ + +E+L +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYL-----RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN- 121
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ ++ AKVSDFGL K S + G + + + APE
Sbjct: 122 --NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALRE 173
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
+TKSDV+S+G++L E+ + GRVP
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + +G + +F+ E+++L L S +++
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 148 G--YCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G Y R+ L LV +Y+ +G L++ L ++LD L + + KG+E+L
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFL------QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEY 263
S +HRD + NIL++ H K++DFGLAK+ DK V + APE
Sbjct: 145 ---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ +SDV+S+GVVL EL T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKK---N 133
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAPEYALTG 267
IHRD + N L+ +N KV+DFGL+++ + G T G + + APE
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT----GDTYTAPAGAKFPIKWTAPESLAYN 189
Query: 268 HLTTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVEL--LGRLRS 140
G + +G G FG V +KVA+K + Q K+ + ++E E+ L LR
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P+++ L + +++ A G L +++ ++ + R + +
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK-------KRMTEDEGRRFFQQIICAI 121
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+ H H ++HRD K N+LLD N + K++DFGL+ I +D G+ G+ Y A
Sbjct: 122 EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFLKTSCGSPNYAA 175
Query: 261 PEYALTGHLTT--KSDVYSYGVVLLELLTGRVPID 293
PE + G L + DV+S G+VL +L GR+P D
Sbjct: 176 PE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 28/282 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+++ +G G G VY + ++ G++VAI+ M+ + ++ E+ ++ ++P ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 146 LL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y +V +Y+A G L + + + +D + E + LEFLH
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEY 263
S VIHRD KS NILL + K++DFG A+I +++ + ++GT ++APE
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEV 187
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP-IDVNKPSGEGVLVSWALPRLTDREKILEI-- 320
K D++S G++ +E++ G P ++ N ++ + P L + EK+ I
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 247
Query: 321 ------MDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
++ +E + S KE++Q + +P + PL+A
Sbjct: 248 DFLNRCLEMDVEKRGSAKELLQHQFLK--IAKPLSSLTPLIA 287
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGLA++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 87 FSKSNVVGHGGFG---LVYRGVLSNGRKV-AIKLMDQAGKQGEDEF--KMEVELLGRLRS 140
F V+G G FG LV + S+ R++ A+K++ +A + D KME ++L +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 141 PYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L + ++ + L+ D++ G L L S V + + + +A E A
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFT-EEDVKFYLA-ELALA 138
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L+ LH S +I+RD K NILLD+ H K++DFGL+K D S GT Y+
Sbjct: 139 LDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE T +D +S+GV++ E+LTG +P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 129
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 134
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 135
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +++ G L+E+L ++D L+ + KG+E+L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL------QKHKERIDHIKLLQYTSQICKGMEYL- 133
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 161
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 136
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 137
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + + L SK D +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQRTATY 118
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 171
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 87 FSKSNVVGHGGFG---LVYRGVLSNGRKV-AIKLMDQAGKQGEDEF--KMEVELLGRLRS 140
F V+G G FG LV + S+ R++ A+K++ +A + D KME ++L +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 141 PYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L + ++ + L+ D++ G L L S V + + + +A E A
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFT-EEDVKFYLA-ELALA 139
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L+ LH S +I+RD K NILLD+ H K++DFGL+K D S GT Y+
Sbjct: 140 LDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 194
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE T +D +S+GV++ E+LTG +P
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 19/213 (8%)
Query: 87 FSKSNVVGHGGFG---LVYRGVLSNGRKV-AIKLMDQAGKQGEDEF--KMEVELLGRLRS 140
F V+G G FG LV + S+ R++ A+K++ +A + D KME ++L +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 141 PYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+++ L + ++ + L+ D++ G L L S V + + + +A E A
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL-----SKEVMFT-EEDVKFYLA-ELALA 138
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L+ LH S +I+RD K NILLD+ H K++DFGL+K D S GT Y+
Sbjct: 139 LDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FCGTVEYM 193
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE T +D +S+GV++ E+LTG +P
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 128
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 24/216 (11%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
V+G G FG + G + +K + + ++ + F EV+++ L P +L +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 151 -SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
D+R + +Y+ G L+ + S+ S+ W R+ A + A G+ +LH S
Sbjct: 77 YKDKRLNFITEYIKGGTLRGII------KSMDSQYPWSQRVSFAKDIASGMAYLH---SM 127
Query: 210 PVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR------------VLGTQG 257
+IHRD S N L+ +N + V+DFGLA++ D+ R V+G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
++APE K DV+S+G+VL E++ GRV D
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 131
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 186
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 187 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 243 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 293
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 148
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 203
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 204 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 259
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 260 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 310
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 148
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 107 SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD---RRKLLVYDYM 162
+ G +VA+K L ++G + K E+E+L L ++ G C++ L+ +++
Sbjct: 48 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 163 ANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNIL 222
+G L+E+L P N +K++ + +L+ A++ KG+++L S +HRD + N+L
Sbjct: 108 PSGSLKEYL-PKN-----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 158
Query: 223 LDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVV 281
++ K+ DFGL K I +DK V + APE + SDV+S+GV
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 218
Query: 282 LLELLT 287
L ELLT
Sbjct: 219 LHELLT 224
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 118
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCGTPEYLA 173
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 137/282 (48%), Gaps = 28/282 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
+++ +G G G VY + ++ G++VAI+ M+ + ++ E+ ++ ++P ++
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 146 LL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y +V +Y+A G L + + + +D + E + LEFLH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVV--------TETCMDEGQIAAVCRECLQALEFLH 134
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEY 263
S VIHR+ KS NILL + K++DFG A+I +++ + ++GT ++APE
Sbjct: 135 ---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEV 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP-IDVNKPSGEGVLVSWALPRLTDREKILEI-- 320
K D++S G++ +E++ G P ++ N ++ + P L + EK+ I
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR 248
Query: 321 ------MDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMA 356
++ +E + S KE+IQ + +P + PL+A
Sbjct: 249 DFLNRCLEMDVEKRGSAKELIQHQFLK--IAKPLSSLTPLIA 288
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 123
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 124 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCGTPEYLA 178
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 97/186 (52%), Gaps = 14/186 (7%)
Query: 107 SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD---RRKLLVYDYM 162
+ G +VA+K L ++G + K E+E+L L ++ G C++ L+ +++
Sbjct: 36 NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 163 ANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNIL 222
+G L+E+L P N +K++ + +L+ A++ KG+++L S +HRD + N+L
Sbjct: 96 PSGSLKEYL-PKN-----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 146
Query: 223 LDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVV 281
++ K+ DFGL K I +DK V + APE + SDV+S+GV
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVT 206
Query: 282 LLELLT 287
L ELLT
Sbjct: 207 LHELLT 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 139
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 192
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 118
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCGTPEYLA 173
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 132/310 (42%), Gaps = 56/310 (18%)
Query: 69 DNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE- 127
D V F + AT S VVG G FG V G L K I + + K G E
Sbjct: 28 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 86
Query: 128 ----FKMEVELLGRLRSPYLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVAS 182
F E ++G+ P ++ L G + + ++V +YM NG L L + +V
Sbjct: 87 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 146
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+ LR A G+++L + +HRD + NIL++ N KVSDFGL+++ D
Sbjct: 147 LVG---MLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 197
Query: 243 KA-------GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI-- 292
GG + R + +PE T+ SDV+SYG+VL E+++ G P
Sbjct: 198 DPEAAYTTRGGKIPIR------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 251
Query: 293 ----DVNKPSGEG----------------VLVSWALPRLTDR---EKILEIMDPALEGQY 329
DV K EG +L W R +R E+I+ I+D +
Sbjct: 252 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPG 310
Query: 330 SMKEVIQVAA 339
S+K + AA
Sbjct: 311 SLKIITSAAA 320
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 118
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLA 173
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 118
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCGTPEYLA 173
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 130
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 131 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 183
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 184 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKN--- 338
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHR+ + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 396
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 397 SIKSDVWAFGVLLWEIAT 414
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 182
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 183 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 236
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 132/310 (42%), Gaps = 56/310 (18%)
Query: 69 DNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE- 127
D V F + AT S VVG G FG V G L K I + + K G E
Sbjct: 30 DPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK 88
Query: 128 ----FKMEVELLGRLRSPYLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVAS 182
F E ++G+ P ++ L G + + ++V +YM NG L L + +V
Sbjct: 89 QRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ 148
Query: 183 KLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
+ LR A G+++L + +HRD + NIL++ N KVSDFGL+++ D
Sbjct: 149 LVG---MLR---GIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLED 199
Query: 243 KA-------GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI-- 292
GG + R + +PE T+ SDV+SYG+VL E+++ G P
Sbjct: 200 DPEAAYTTRGGKIPIR------WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253
Query: 293 ----DVNKPSGEG----------------VLVSWALPRLTDR---EKILEIMDPALEGQY 329
DV K EG +L W R +R E+I+ I+D +
Sbjct: 254 MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPG 312
Query: 330 SMKEVIQVAA 339
S+K + AA
Sbjct: 313 SLKIITSAAA 322
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 121
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 122 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLA 176
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL ++ E R R E L
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSAL 118
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S V++RD K N++LDK+ H K++DFGL K G + G GT Y+A
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLA 173
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 130
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHRD + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 118
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 171
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 116
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 169
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 174
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 125/292 (42%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V +YM NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL ++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTELCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 113
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDL 166
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 118
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 171
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN--- 335
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHR+ + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 393
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 394 SIKSDVWAFGVLLWEIAT 411
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 174
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 147
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 148 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 201
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 25 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + A + L +
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL V S E R R E L
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFS----EDRARFYGAEIVSAL 264
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++LH + V++RD K N++LDK+ H K++DFGL K G K G + T GT Y+A
Sbjct: 265 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKT-FCGTPEYLA 320
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 114
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDL 167
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 116
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTL 169
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 174
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL V S E R R E L
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFS----EDRARFYGAEIVSAL 261
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++LH + V++RD K N++LDK+ H K++DFGL K G K G + T GT Y+A
Sbjct: 262 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI-KDGATMKT-FCGTPEYLA 317
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY N + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A + GT
Sbjct: 119 NALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 118
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDL 171
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 22 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 79 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 138
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + + L +
Sbjct: 139 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G +G VY GV VA+K + + + E EF E ++ ++ P L+ LLG C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 152 DRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ ++M G L ++L N A L L +A + + +E+L +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL-----LYMATQISSAMEYLEKKN--- 377
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGS-DKAGGHVSTRVLGTQGYVAPEYALTGHL 269
IHR+ + N L+ +N KV+DFGL+++ + D H + + APE
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 435
Query: 270 TTKSDVYSYGVVLLELLT 287
+ KSDV+++GV+L E+ T
Sbjct: 436 SIKSDVWAFGVLLWEIAT 453
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 25 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + + L +
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 174
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 120
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 121 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 174
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
H + +SD++S G+ L+E+ GR PI
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 25 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + + L +
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 30/210 (14%)
Query: 92 VVGHGGFGLVYRGVLS-NGRK---VAIKLMD--QAGKQGEDEFKMEVELLGRLRSPYLLA 145
V+G G FG V G L G++ VAIK + KQ D F E ++G+ P ++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD-FLGEASIMGQFDHPNIIH 87
Query: 146 LLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + + ++V +YM NG L L +G +V + LR + G+++L
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVG---MLR---GISAGMKYLS 141
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVLGTQG 257
+ +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 142 DMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR------ 192
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ APE T+ SDV+SYG+V+ E+++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 112/225 (49%), Gaps = 20/225 (8%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAG-------RIPEQILGKVSIAVIKGLTYL 139
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG+ S + ++ +GT+ Y++PE
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPER 193
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWAL 308
H + +SD++S G+ L+E+ GR PI SG G + + L
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGRYPIG----SGSGSMAIFEL 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 92 VVGHGGFGLVYRGVLS-NGRK---VAIKLMDQAG---KQGEDEFKMEVELLGRLRSPYLL 144
V+G G FG V G L G++ VAIK + +AG KQ D F E ++G+ P ++
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRD-FLSEASIMGQFDHPNII 78
Query: 145 ALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
L G + + +++ +YM NG L L +G +V + + G+++L
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGIGSGMKYL 132
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVLGTQ 256
+ +HRD + NIL++ N KVSDFG++++ D GG + R
Sbjct: 133 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR----- 184
Query: 257 GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ APE T+ SDV+SYG+V+ E+++
Sbjct: 185 -WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 114
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A T +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SCHAPSSRRTTL 167
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 168 SGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + + L SK D +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-------QKLSKFDEQRTATY 118
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXL 171
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTDLCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 131 EVELLGRLRSPYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
E+++L SPY++ G + SD + ++M G L + L A ++ E
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-------KEAKRIPEEIL 116
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
++++ +GL +L E ++HRD K SNIL++ K+ DFG+ S + ++
Sbjct: 117 GKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMA 170
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+GT+ Y+APE H + +SD++S G+ L+EL GR PI
Sbjct: 171 NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTXLCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 92 VVGHGGFGLVYRGVLSNGRK----VAIKLMDQAG---KQGEDEFKMEVELLGRLRSPYLL 144
V+G G FG V G L K VAIK + +AG KQ D F E ++G+ P ++
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTL-KAGYTDKQRRD-FLSEASIMGQFDHPNII 72
Query: 145 ALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
L G + + +++ +YM NG L L +G +V + + G+++L
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG------MLRGIGSGMKYL 126
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVLGTQ 256
+ +HRD + NIL++ N KVSDFG++++ D GG + R
Sbjct: 127 SDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR----- 178
Query: 257 GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ APE T+ SDV+SYG+V+ E+++
Sbjct: 179 -WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 117
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 118 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLD 170
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V +KL + + + +GL+++H
Sbjct: 85 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 268 -HLTTKSDVYSYGVVLLELLTGR 289
H D++S G ++ ELLTGR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 37/279 (13%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLL 144
F+K +G G FG V++G+ + ++V AIK++D + + ++ + E+ +L + S Y+
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G Y + ++ +Y+ G + L A D + E KGL++L
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLR--------AGPFDEFQIATMLKEILKGLDYL 136
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
H S IHRD K++N+LL + K++DFG+A +D +GT ++APE
Sbjct: 137 H---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEV 191
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDP 323
+K+D++S G+ +EL G P P + V + +P+ P
Sbjct: 192 IQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP----MRVLFLIPKNN---------PP 238
Query: 324 ALEGQY--SMKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
L G + S KE I C+ + +RP ++++
Sbjct: 239 TLVGDFTKSFKEFIDA------CLNKDPSFRPTAKELLK 271
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 122
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 123 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLD 175
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 99 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 152
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 207
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V + M NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV----YRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
+G G FG V Y + N G VA+K + + ++ +F+ E+E+L L+ ++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 148 GYC--SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G C + RR L L+ +Y+ G L+++L ++D L+ + KG+E+L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL------QKHKERIDHIKLLQYTSQICKGMEYL- 131
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI-GSDKAGGHVSTRVLGTQGYVAPEY 263
+ IHR+ + NIL++ K+ DFGL K+ DK V + APE
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 264 ALTGHLTTKSDVYSYGVVLLELLT 287
+ SDV+S+GVVL EL T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNA 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 16/208 (7%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLL 144
F K + +G G G+V++ +G +A KL+ K ++ E+++L SPY++
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G + SD + ++M G L + L A ++ + ++++ KGL +L
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVL-------KKAGRIPEQILGKVSIAVIKGLTYL 123
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
E ++HRD K SNIL++ K+ DFG++ D+ ++ +GT+ Y++PE
Sbjct: 124 REKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPER 177
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVP 291
H + +SD++S G+ L+E+ GR P
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 96 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ +D+ G+V+TR Y APE L
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 96 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ +D+ G+V+TR Y APE L
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 115
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K+++FG S A T +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTL 168
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 96 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ +D+ G+V+TR Y APE L
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V + M NG L L + +V + LR A G+
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 131
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 132 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 186
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 187 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 242
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 243 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 293
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 95 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 97/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 116
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K+++FG S A T +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW----SVHAPSSRRTTL 169
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 115
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXL 168
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 169 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 85 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ G + GG V
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV----K 228
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ G + GG V
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV----K 251
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 115
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A T + GT
Sbjct: 116 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRTTLCGTLD 168
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 109 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 108 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 139
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDL 192
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 193 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 94 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 88 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 141
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 196
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 30/210 (14%)
Query: 92 VVGHGGFGLVYRGVLS-NGRK---VAIKLMD--QAGKQGEDEFKMEVELLGRLRSPYLLA 145
V+G G FG V G L G++ VAIK + KQ D F E ++G+ P ++
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD-FLCEASIMGQFDHPNVVH 108
Query: 146 LLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + + ++V ++M NG L L +G +V + + A G+ +L
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVG------MLRGIAAGMRYLA 162
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-------KAGGHVSTRVLGTQG 257
+ +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 163 DM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR------ 213
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ APE T+ SDV+SYG+V+ E+++
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL V S E R R E L
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFS----EDRARFYGAEIVSAL 123
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++LH + V++RD K N++LDK+ H K++DFGL K G G GT Y+A
Sbjct: 124 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA 179
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 180 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 85 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G V+TR Y APE L
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYRAPEIMLNW 193
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 94 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 91 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 96 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 204
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 95 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL V S E R R E L
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFS----EDRARFYGAEIVSAL 122
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++LH + V++RD K N++LDK+ H K++DFGL K G G GT Y+A
Sbjct: 123 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA 178
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 100 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F+ V+G G FG V ++ AIK++ + +D+ + +E +L L P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 143 LLALLGYCSDR--RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
L L C R V +Y+ G L H+ K + A E + GL
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHI-------QQVGKFKEPQAVFYAAEISIGL 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
FLH+ +I+RD K N++LD H K++DFG+ K G + GT Y+A
Sbjct: 134 FFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
PE D ++YGV+L E+L G+ P D
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 91 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 116
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXL 169
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 100 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 94 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 91 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 86 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 96/223 (43%), Gaps = 19/223 (8%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVE 133
K+ A F +G G FG VY + + A+K++ +A K G E + + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 134 LLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ LR P +L L GY D R L+ +Y G + L SK D +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATY 114
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H S VIHRD K N+LL K++DFG S A +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDTL 167
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
GT Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 168 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 101 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 112 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNW 220
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 109 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 85 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 101 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 87 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 140
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 195
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 87 FSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F ++G G FG ++ + GR A+K++ + +DE E +L R P+
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI-ALEAAKGL 200
L AL + + R V +Y G L HL V S E R R E L
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFS----EDRARFYGAEIVSAL 121
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++LH + V++RD K N++LDK+ H K++DFGL K G G GT Y+A
Sbjct: 122 DYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEGI--KDGATMKXFCGTPEYLA 177
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE D + GVV+ E++ GR+P
Sbjct: 178 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 112 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 220
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 101 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 86 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 108 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
+G G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 94 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 95 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 125/292 (42%), Gaps = 55/292 (18%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
S VVG G FG V G L K I + + K G E F E ++G+ P
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 142 YLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L G + + ++V + M NG L L + +V + LR A G+
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG---MLR---GIASGM 160
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA-------GGHVSTRVL 253
++L + +HRD + NIL++ N KVSDFGL+++ D GG + R
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR-- 215
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPI------DVNKPSGEG----- 301
+ +PE T+ SDV+SYG+VL E+++ G P DV K EG
Sbjct: 216 ----WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
Query: 302 -----------VLVSWALPRLTDR---EKILEIMDPALEGQYSMKEVIQVAA 339
+L W R +R E+I+ I+D + S+K + AA
Sbjct: 272 PMDCPAALYQLMLDCWQKDR-NNRPKFEQIVSILDKLIRNPGSLKIITSAAA 322
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 92 VVGHGGFGLVYRGVLS-NGRK---VAIKLMDQ--AGKQGEDEFKMEVELLGRLRSPYLLA 145
V+G G FG V G L G++ VAIK + KQ D F E ++G+ P ++
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRD-FLSEASIMGQFDHPNVIH 72
Query: 146 LLGYCSDRRK-LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L G + +++ ++M NG L L +G +V + LR A G+++L
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVG---MLR---GIAAGMKYLA 126
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ---GYVAP 261
+ +HR + NIL++ N KVSDFGL++ D T LG + + AP
Sbjct: 127 DM---NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLT 287
E T+ SDV+SYG+V+ E+++
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 95 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 91 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 25 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + + L +
Sbjct: 142 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ +L ++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 211
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 93 VGHGGFGLVYRGVL-SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG V+ G L ++ VA+K + + +F E +L + P ++ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ ++ + + + GG G+ +L +T L++ +AA G+E+L C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD----KAGGHVSTRVLGTQGYVAPEYALT 266
IHRD + N L+ + K+SDFG+++ +D +GG V + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPV----KWTAPEALNY 289
Query: 267 GHLTTKSDVYSYGVVLLELLT 287
G +++SDV+S+G++L E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGE-DEFKMEVELLGRLRSPYLLALLG-Y 149
+G G +G VY+ + G+ VAIK Q + + E E+ ++ + SP+++ G Y
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIK---QVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 150 CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA-KGLEFLHEHCS 208
+ +V +Y G + + + N + + E + L++ KGLE+LH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLT-------EDEIATILQSTLKGLEYLHFMRK 146
Query: 209 PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGH 268
IHRD K+ NILL+ HAK++DFG+A +D V+GT ++APE
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR--NXVIGTPFWMAPEVIQEIG 201
Query: 269 LTTKSDVYSYGVVLLELLTGRVP 291
+D++S G+ +E+ G+ P
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPP 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 93 VGHGGFGLVYRGVL-SNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG V+ G L ++ VA+K + + +F E +L + P ++ L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+ ++ + + + GG G+ +L +T L++ +AA G+E+L C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGA-----RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD----KAGGHVSTRVLGTQGYVAPEYALT 266
IHRD + N L+ + K+SDFG+++ +D +GG V + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPV----KWTAPEALNY 289
Query: 267 GHLTTKSDVYSYGVVLLELLT 287
G +++SDV+S+G++L E +
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ +L ++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 118
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A + GT
Sbjct: 119 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRXXLCGTLD 171
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 121
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRAALCGTLD 174
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 109 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G V+TR Y APE L
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYRAPEIMLNW 217
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 24 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 81 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 140
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HRD + N ++ +F K+ DFG+ + + + L +
Sbjct: 141 GMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLM--DQAGKQG-EDEFKMEVELLGRLR 139
F +G G FG VY L+ R+ +A+K++ Q K G E + + EVE+ LR
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 140 SPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P +L L GY D R L+ +Y G + L S+ D + E A
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTATYITELAN 123
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
L + H S VIHRD K N+LL N K++DFG S A T + GT Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRTTLCGTLDY 176
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
+ PE K D++S GV+ E L G P + +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V S+ + ++ + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGL + D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V + +G K+A+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 118 VFTPATSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 171
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DFGLA+ D+ G+V+TR Y APE L
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 226
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NIL+ KV DFG+A+ +D
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 35/285 (12%)
Query: 92 VVGHGGFGLVYRGVLSNGR-KVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
V+G G +V + + KVAIK ++ + + DE E++ + + P +++
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 150 CSDRRKLLVYDYMANGG----LQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
+ +L + + +GG + +H+ A G + + LD T I E +GLE+LH+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIV-AKGEHK-SGVLDESTIATILREVLEGLEYLHK 139
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI---GSDKAGGHVSTRVLGTQGYVAPE 262
+ IHRD K+ NILL ++ +++DFG++ G D V +GT ++APE
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 263 Y--ALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI 320
+ G+ K+D++S+G+ +EL TG P P +L L+
Sbjct: 197 VMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-------------LQN 242
Query: 321 MDPALEGQYSMKEVIQ-----VAAIAAMCVQPEADYRPLMADVVQ 360
P+LE KE+++ + ++C+Q + + RP A++++
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NI++ KV DFG+A+ +D
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NI++ KV DFG+A+ +D
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ D+GLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NI++ KV DFG+A+ +D
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NI++ KV DFG+A+ +D
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 34/289 (11%)
Query: 92 VVGHGGFGLVYRGVLSN-GRKVAIK-LMDQAGKQGEDEFKM-EVELLGRLRSPYLLALLG 148
+VG G +G+V + + GR VAIK ++ + + M E++LL +LR L+ LL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 149 YCSDRRKL-LVYDYMANGGLQE-HLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
C +++ LV++++ + L + L+P NG LD++ + + G+ F H H
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFP-NG-------LDYQVVQKYLFQIINGIGFCHSH 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+IHRD K NIL+ ++ K+ DFG A+ + A G V + T+ Y APE L
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA--APGEVYDDEVATRWYRAPE-LLV 197
Query: 267 GHLT--TKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPA 324
G + DV++ G ++ E+ G + + + L L R + L +P
Sbjct: 198 GDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257
Query: 325 LEG----QYSMKEVIQ---------VAAIAAMCVQPEADYRPLMADVVQ 360
G + +E ++ V +A C+ + D RP A+++
Sbjct: 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQA-GKQGEDEFKMEVELLGRLR 139
G + +G GGFG V R + + G +VAIK Q + + + +E++++ +L
Sbjct: 12 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 71
Query: 140 SPYLLA-------LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
P +++ L + LL +Y G L+++L N K E +R
Sbjct: 72 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLK---EGPIRT 126
Query: 193 AL-EAAKGLEFLHEHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHV 248
L + + L +LHE+ +IHRD K NI+L + K+ D G AK + G +
Sbjct: 127 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGEL 180
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
T +GT Y+APE T D +S+G + E +TG P N
Sbjct: 181 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM--EVELLGRLRSPYLLALLG 148
++G G FG V + ++ A+K++++A + +D + EVELL +L P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
D + + GG L+ S+ D RI + G+ ++H+H
Sbjct: 89 ILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH-- 140
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HRD K NILL+ K+ K+ DFGL+ + + R+ GT Y+APE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VL 195
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
G K DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 94/218 (43%), Gaps = 19/218 (8%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQG-EDEFKMEVELLGRL 138
A F +G G FG VY + + A+K++ +A K G E + + EVE+ L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 139 RSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
R P +L L GY D R L+ +Y G + L SK D + E A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSKFDEQRTATYITELA 121
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L + H S VIHRD K N+LL K++DFG S A + GT
Sbjct: 122 NALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----SVHAPSSRRDDLCGTLD 174
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+ PE K D++S GV+ E L G+ P + N
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGVLSN-GRKVAIKLMDQA-GKQGEDEFKMEVELLGRLR 139
G + +G GGFG V R + + G +VAIK Q + + + +E++++ +L
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN 70
Query: 140 SPYLLA-------LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
P +++ L + LL +Y G L+++L N K E +R
Sbjct: 71 HPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLK---EGPIRT 125
Query: 193 AL-EAAKGLEFLHEHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHV 248
L + + L +LHE+ +IHRD K NI+L + K+ D G AK + G +
Sbjct: 126 LLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGEL 179
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
T +GT Y+APE T D +S+G + E +TG P N
Sbjct: 180 CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 227
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 210
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLA----KIGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A + + GG V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV----K 211
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 202
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 35/285 (12%)
Query: 92 VVGHGGFGLVYRGVLSNGR-KVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
V+G G +V + + KVAIK ++ + + DE E++ + + P +++
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 150 CSDRRKLLVYDYMANGG----LQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
+ +L + + +GG + +H+ A G + + LD T I E +GLE+LH+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIV-AKGEHK-SGVLDESTIATILREVLEGLEYLHK 134
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI---GSDKAGGHVSTRVLGTQGYVAPE 262
+ IHRD K+ NILL ++ +++DFG++ G D V +GT ++APE
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 263 Y--ALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEI 320
+ G+ K+D++S+G+ +EL TG P P +L L+
Sbjct: 192 VMEQVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT-------------LQN 237
Query: 321 MDPALEGQYSMKEVIQ-----VAAIAAMCVQPEADYRPLMADVVQ 360
P+LE KE+++ + ++C+Q + + RP A++++
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 211
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ + +A + L F H++ +IHRD K +NI++ KV DFG+A+ +D
Sbjct: 136 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 250 TR-VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T V+GT Y++PE A + +SDVYS G VL E+LTG P + P
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 210
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 237
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 217
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM--EVELLGRLRSPYLLALLG 148
++G G FG V + ++ A+K++++A + +D + EVELL +L P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
D + + GG L+ S+ D RI + G+ ++H+H
Sbjct: 89 ILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH-- 140
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HRD K NILL+ K+ K+ DFGL+ + + R+ GT Y+APE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VL 195
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
G K DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQ-AGKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM--EVELLGRLRSPYLLALLG 148
++G G FG V + ++ A+K++++A + +D + EVELL +L P ++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
D + + GG L+ S+ D RI + G+ ++H+H
Sbjct: 89 ILEDSSSFYIVGELYTGG---ELFDEIIKRKRFSEHD---AARIIKQVFSGITYMHKH-- 140
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HRD K NILL+ K+ K+ DFGL+ + + R+ GT Y+APE L
Sbjct: 141 -NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRI-GTAYYIAPE-VL 195
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
G K DV+S GV+L LL+G P
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 33/214 (15%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLALLG-- 148
V G FG V++ L N VA+K+ KQ ++E+ EV L ++ +L +G
Sbjct: 31 VKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAE 87
Query: 149 ---YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
D L+ + G L + L A+ + W IA A+GL +LHE
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSDFLK--------ANVVSWNELCHIAETMARGLAYLHE 139
Query: 206 HC-------SPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
P + HRD KS N+LL N A ++DFGLA K + K+ G +V GT+
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV-GTRR 198
Query: 258 YVAPEYALTGHLT------TKSDVYSYGVVLLEL 285
Y+APE L G + + D+Y+ G+VL EL
Sbjct: 199 YMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 25 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 81
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 82 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 141
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HR+ + N ++ +F K+ DFG+ + + + L +
Sbjct: 142 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 33/288 (11%)
Query: 93 VGHGGFGLV--YRGVLSN---GRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V Y +N G VA+K L G Q +K E+++L L +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 147 LGYCSDRRK---LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G C D+ + LV +Y+ G L+++L S +A L A + +G+ +L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQ------LLLFAQQICEGMAYL 133
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVL----GTQGYV 259
H S IHR+ + N+LLD + K+ DFGLAK + GH RV +
Sbjct: 134 H---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWY 187
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
APE SDV+S+GV L ELLT + P+ L+ A ++T ++ E
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVL-RLTE 245
Query: 320 IMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
+++ K +V + C + EA +RP ++L+P++K
Sbjct: 246 LLERGERLPRPDKCPCEVYHLMKNCWETEASFRP----TFENLIPILK 289
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ DF LA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 20/209 (9%)
Query: 93 VGHGGFGLVYRGVLSNGR---------KVAIKLMDQAGKQGED-EFKMEVELLGRLRSPY 142
+G G FG+VY G N R +VA+K ++++ E EF E ++ +
Sbjct: 26 LGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 82
Query: 143 LLALLGYCSD-RRKLLVYDYMANGGLQEHLY---PANGSNSVASKLDWETRLRIALEAAK 198
++ LLG S + L+V + MA+G L+ +L P +N + +++A E A
Sbjct: 83 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 142
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
G+ +L+ + +HR+ + N ++ +F K+ DFG+ + + + L +
Sbjct: 143 GMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+APE G TT SD++S+GVVL E+ +
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 93 VGHGGFGLVYRGVLS------NGRKVAIKLMDQA-GKQGEDEFKMEVELLGRLRSPYLLA 145
+GHG FG VY G +S + +VA+K + + +Q E +F ME ++ + ++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 146 LLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
+G + ++ + MA G L+ L S S L L +A + A G ++L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAK----IGSDKAGGHVSTRVLGTQG 257
E+ IHRD + N LL AK+ DFG+A+ + GG V
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV----K 225
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++ PE + G T+K+D +S+GV+L E+ +
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 32/224 (14%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRS----- 140
+ +V+G G +V R V + G + A+K+M+ ++ E EV R +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 141 ----PYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVA-SKLDWETRLRIAL 194
P+++ L+ Y S LV+D M G L ++L + VA S+ + + +R L
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-----TEKVALSEKETRSIMRSLL 210
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLG 254
EA + FLH + ++HRD K NILLD N ++SDFG + G + G
Sbjct: 211 EA---VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS---CHLEPGEKLRELCG 261
Query: 255 TQGYVAPEYALTGHLTT------KSDVYSYGVVLLELLTGRVPI 292
T GY+APE T + D+++ GV+L LL G P
Sbjct: 262 TPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 28/268 (10%)
Query: 108 NGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL---LVYDYMA 163
G VA+K L AG Q +K E+++L L +++ G C D LV +Y+
Sbjct: 59 TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVP 118
Query: 164 NGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILL 223
G L+++L S +A L A + +G+ +LH + IHRD + N+LL
Sbjct: 119 LGSLRDYL--PRHSIGLAQ------LLLFAQQICEGMAYLH---AQHYIHRDLAARNVLL 167
Query: 224 DKNFHAKVSDFGLAKIGSDKAGGHVSTRVL----GTQGYVAPEYALTGHLTTKSDVYSYG 279
D + K+ DFGLAK + GH RV + APE SDV+S+G
Sbjct: 168 DNDRLVKIGDFGLAKAVPE---GHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFG 224
Query: 280 VVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAA 339
V L ELLT + P+ L+ A ++T ++ E+++ K +V
Sbjct: 225 VTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVL-RLTELLERGERLPRPDKCPAEVYH 282
Query: 340 IAAMCVQPEADYRPLMADVVQSLVPLVK 367
+ C + EA +RP ++L+P++K
Sbjct: 283 LMKNCWETEASFRP----TFENLIPILK 306
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 24/227 (10%)
Query: 93 VGHGGFGLVY--RGVLSNGRKVAIKLMDQAGKQGED---EFKMEVELLGRLRSPYLLALL 147
+G GG VY + N KVAIK + ++ E+ F+ EV +L +++++
Sbjct: 19 LGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 148 GYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
D LV +Y+ L E++ ++G SV + +++ ++ ++ A +
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAHDMR----- 131
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
++HRD K NIL+D N K+ DFG+AK S+ + + VLGT Y +PE A
Sbjct: 132 ----IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKG 186
Query: 267 GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTD 313
+D+YS G+VL E+L G P + GE VS A+ + D
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFN-----GETA-VSIAIKHIQD 227
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 87 FSKSNVVGHGGFGLVYRG-VLSNGRKVAIKLMDQAGKQ---GEDEFKMEVELLGRLRSPY 142
F + V+G GGFG V V + G+ A K +++ + GE E ++L ++ S +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++L Y + LV M G L+ H+Y + ++ + A E GLE
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA-----VFYAAEICCGLE 300
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
LH +++RD K NILLD + H ++SD GLA + G + RV GT GY+AP
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGYMAP 354
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
E T D ++ G +L E++ G+ P K
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 16/215 (7%)
Query: 87 FSKSNVVGHGGFGLVYRG-VLSNGRKVAIKLMDQAGKQ---GEDEFKMEVELLGRLRSPY 142
F + V+G GGFG V V + G+ A K +++ + GE E ++L ++ S +
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 143 LLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++L Y + LV M G L+ H+Y + ++ + A E GLE
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA-----VFYAAEICCGLE 300
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
LH +++RD K NILLD + H ++SD GLA + G + RV GT GY+AP
Sbjct: 301 DLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE--GQTIKGRV-GTVGYMAP 354
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
E T D ++ G +L E++ G+ P K
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 95/217 (43%), Gaps = 25/217 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLM--DQAGKQG-EDEFKMEVELLGRLR 139
F +G G FG VY L+ R+ +A+K++ Q K G E + + EVE+ LR
Sbjct: 14 FDIGRPLGKGKFGNVY---LARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 140 SPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P +L L GY D R L+ +Y G + L S+ D + E A
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL-------QKLSRFDEQRTATYITELAN 123
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
L + H S VIHRD K N+LL N K++DFG S A + GT Y
Sbjct: 124 ALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW----SVHAPSSRRDTLCGTLDY 176
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
+ PE K D++S GV+ E L G P + +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ FGLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 34/235 (14%)
Query: 92 VVGHGGFGLVYR----GVLSNGR--KVAIKLMDQAGKQGEDEFKM-EVELLGRLRS-PYL 143
V+G G FG V G+ G +VA+K++ + E E M E++++ +L S +
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 144 LALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV----------------ASKLDW 186
+ LLG C+ + L+++Y G L +L S + L +
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 187 ETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGG 246
E L A + AKG+EFL +HRD + N+L+ K+ DFGLA+ +
Sbjct: 172 EDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 247 HVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT------GRVPIDVN 295
V ++APE G T KSDV+SYG++L E+ + +P+D N
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 283
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 22/231 (9%)
Query: 70 NGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRG-VLSNGRKVAIKLMDQAGKQGEDEF 128
NG+ V + +L F V+G G FG V V G A+K++ + +D+
Sbjct: 10 NGIGVNSSNRL--GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDV 67
Query: 129 KM---EVELLGRLRSPYLLALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASK 183
+ E +L R+ L L C + R V +++ G L H+ + +
Sbjct: 68 ECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-------QKSRR 120
Query: 184 LDWETRLRI-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD 242
D E R R A E L FLH+ +I+RD K N+LLD H K++DFG+ K G
Sbjct: 121 FD-EARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI- 175
Query: 243 KAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
G + GT Y+APE D ++ GV+L E+L G P +
Sbjct: 176 -CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSPYLLAL 146
++G G G V G L + + + +A K G E F E ++G+ P ++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 147 LGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
G + R ++V +YM NG L L +G ++ + + G+ +L +
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG------MLRGVGAGMRYLSD 169
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-------KAGGHVSTRVLGTQGY 258
+HRD + N+L+D N KVSDFGL+++ D GG + R +
Sbjct: 170 LG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR------W 220
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELL 286
APE ++ SDV+S+GVV+ E+L
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ D GLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 28/208 (13%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSPYLLAL 146
++G G G V G L + + + +A K G E F E ++G+ P ++ L
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 147 LGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
G + R ++V +YM NG L L +G ++ + + G+ +L +
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVG------MLRGVGAGMRYLSD 169
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSD-------KAGGHVSTRVLGTQGY 258
+HRD + N+L+D N KVSDFGL+++ D GG + R +
Sbjct: 170 LG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR------W 220
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELL 286
APE ++ SDV+S+GVV+ E+L
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVL 248
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 36/216 (16%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPYLLALLGY 149
VG G +G V+RG L +G VA+K+ + E + E E+ LR +L +
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 150 CSDRRK-----LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
R L+ Y +G L + L +A LR+A+ AA GL LH
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA--------LRLAVSAACGLAHLH 122
Query: 205 -----EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI---GSDKAGGHVSTRVLGTQ 256
P + HRDFKS N+L+ N ++D GLA + GSD + RV GT+
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTK 181
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + T +D++++G+VL E+
Sbjct: 182 RYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 33/288 (11%)
Query: 93 VGHGGFGLV--YRGVLSN---GRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G FG V Y +N G VA+K L G Q +K E+++L L +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 147 LGYCSDRRK---LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
G C D+ + LV +Y+ G L+++L S +A L A + +G+ +L
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIGLAQ------LLLFAQQICEGMAYL 133
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVL----GTQGYV 259
H + IHR+ + N+LLD + K+ DFGLAK + GH RV +
Sbjct: 134 H---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWY 187
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILE 319
APE SDV+S+GV L ELLT + P+ L+ A ++T ++ E
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVL-RLTE 245
Query: 320 IMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
+++ K +V + C + EA +RP ++L+P++K
Sbjct: 246 LLERGERLPRPDKCPCEVYHLMKNCWETEASFRP----TFENLIPILK 289
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ D GLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 37/292 (12%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 56 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGLQEHL---------YPANGSNSVASKLDWETRLR 191
++ LLG C+ +LV +Y G L L Y N S++ +L L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR 251
+ + A+G+ FL S IHRD + N+LL AK+ DFGLA+ + + V
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVPIDVNKPSGEGVLVSWALPR 310
++APE T +SDV+SYG++L E+ + G P G+LV+ +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY-------PGILVNSKFYK 280
Query: 311 LTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSL 362
L + ++ PA + + +I C E +RP + L
Sbjct: 281 LV--KDGYQMAQPAFAPK-------NIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V G +VA+K + Q+ + ++ E+ LL ++ ++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV-ASKLDWETRLRIALEAAKGLEFLHEHC 207
+ R L ++ + L HL A+ +N V KL + + + +GL+++H
Sbjct: 89 VFTPARSLEEFN---DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
S +IHRD K SN+ ++++ K+ D GLA+ D+ G+V+TR Y APE L
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 268 -HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ ELLTGR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 92 VVGHGGFGLVYRGVLSNGRKV-AIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
V+G G FG V + RKV A+KL+ + + F E +++ SP+++ L
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 148 -GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ DR +V +YM G L + + A + + +AL+A + F
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLALDAIHSMGF---- 189
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
IHRD K N+LLDK+ H K++DFG + +K G +GT Y++PE +
Sbjct: 190 -----IHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 267 ----GHLTTKSDVYSYGVVLLELLTGRVPI 292
G+ + D +S GV L E+L G P
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 92 VVGHGGFGLVYRGVLSNGRKV-AIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
V+G G FG V + RKV A+KL+ + + F E +++ SP+++ L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 148 -GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ DR +V +YM G L + + V K W R A E L+ +H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLM----SNYDVPEK--W-ARFYTA-EVVLALDAIH-- 190
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S IHRD K N+LLDK+ H K++DFG + +K G +GT Y++PE +
Sbjct: 191 -SMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 267 ----GHLTTKSDVYSYGVVLLELLTGRVPI 292
G+ + D +S GV L E+L G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 197
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 92 VVGHGGFGLVYRGVLSNGRKV-AIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
V+G G FG V + RKV A+KL+ + + F E +++ SP+++ L
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 148 -GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ DR +V +YM G L + + A + + +AL+A + F
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF--YTAEVVLALDAIHSMGF---- 194
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
IHRD K N+LLDK+ H K++DFG + +K G +GT Y++PE +
Sbjct: 195 -----IHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 267 ----GHLTTKSDVYSYGVVLLELLTGRVPI 292
G+ + D +S GV L E+L G P
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 26/220 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQA------GKQGEDEFKMEVELLGRLR 139
+ V+G G F +V R + G++ A+K++D A G ED K E + L+
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED-LKREASICHMLK 84
Query: 140 SPYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P+++ LL Y SD +V+++M L + + V S+ +R LEA
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA-- 142
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLA-KIGSDK--AGGHVSTRV 252
L + H++ +IHRD K N+LL + + K+ DFG+A ++G AGG V
Sbjct: 143 -LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV---- 194
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT ++APE DV+ GV+L LL+G +P
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 72 LQVFTFKQLHSATGG---FSKSNVVGHGGFGLVYRGVL-SNGRKVAIKLMDQA------G 121
L+ +K L + G F V+G GGFG V+ + + G+ A K +++ G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
QG +E ++L ++ S ++++L + L LV M G ++ H+Y + N
Sbjct: 229 YQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA--- 237
+ + + GLE LH+ +I+RD K N+LLD + + ++SD GLA
Sbjct: 286 FQE---PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 238 KIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
K G K G+ GT G++APE L D ++ GV L E++ R P
Sbjct: 340 KAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 142 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 193
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 204
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 72 LQVFTFKQLHSATGG---FSKSNVVGHGGFGLVYRGVL-SNGRKVAIKLMDQA------G 121
L+ +K L + G F V+G GGFG V+ + + G+ A K +++ G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
QG +E ++L ++ S ++++L + L LV M G ++ H+Y + N
Sbjct: 229 YQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA--- 237
+ + + GLE LH+ +I+RD K N+LLD + + ++SD GLA
Sbjct: 286 FQE---PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 238 KIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
K G K G+ GT G++APE L D ++ GV L E++ R P
Sbjct: 340 KAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 204
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 73 QVFTFKQLHSA--TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGED--EF 128
++ + +LH TGGF+K + H + G VAIK+MD+ G D
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACH----------ILTGEMVAIKIMDK-NTLGSDLPRI 55
Query: 129 KMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWE 187
K E+E L LR ++ L K+ +V +Y G L +++ + +L E
Sbjct: 56 KTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD-------RLSEE 108
Query: 188 TRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGH 247
+ + + ++H S HRD K N+L D+ K+ DFGL H
Sbjct: 109 ETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165
Query: 248 VSTRVLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPID 293
+ T G+ Y APE +L +++DV+S G++L L+ G +P D
Sbjct: 166 LQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 72 LQVFTFKQLHSATGG---FSKSNVVGHGGFGLVYRGVL-SNGRKVAIKLMDQA------G 121
L+ +K L + G F V+G GGFG V+ + + G+ A K +++ G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
QG +E ++L ++ S ++++L + L LV M G ++ H+Y + N
Sbjct: 229 YQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA--- 237
+ + + GLE LH+ +I+RD K N+LLD + + ++SD GLA
Sbjct: 286 FQE---PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 238 KIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
K G K G+ GT G++APE L D ++ GV L E++ R P
Sbjct: 340 KAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 22/230 (9%)
Query: 70 NGLQVFTFKQLHSATGGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGE 125
N + T +Q H G + +G G F V R VL+ GR+VA+K++D Q
Sbjct: 2 NSITSATDEQPH--IGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSL 58
Query: 126 DEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKL 184
+ EV ++ L P ++ L + L LV +Y + G + ++L A+G
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK----- 112
Query: 185 DWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA 244
+ E R + + +++ H+ ++HRD K+ N+LLD + + K++DFG + ++
Sbjct: 113 EKEARAKFR-QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS---NEFT 165
Query: 245 GGHVSTRVLGTQGYVAPE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
G+ G+ Y APE + + + DV+S GV+L L++G +P D
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Query: 72 LQVFTFKQLHSATGG---FSKSNVVGHGGFGLVYRGVL-SNGRKVAIKLMDQA------G 121
L+ +K L + G F V+G GGFG V+ + + G+ A K +++ G
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
QG +E ++L ++ S ++++L + L LV M G ++ H+Y + N
Sbjct: 229 YQGA---MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG 285
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA--- 237
+ + + GLE LH+ +I+RD K N+LLD + + ++SD GLA
Sbjct: 286 FQE---PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 238 KIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
K G K G+ GT G++APE L D ++ GV L E++ R P
Sbjct: 340 KAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 145 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 196
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLM--DQAGKQG-EDEFKMEVELLGRLRSPY 142
F +G G FG VY + + A+K++ Q K+G E + + E+E+ LR P
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+L + Y DR+++ L+ ++ G L + L + D + E A L
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL-------QKHGRFDEQRSATFMEELADALH 129
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ HE VIHRD K N+L+ K++DFG S A + GT Y+ P
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPP 182
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E K D++ GV+ E L G P D
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLM--DQAGKQG-EDEFKMEVELLGRLRSPY 142
F +G G FG VY + + A+K++ Q K+G E + + E+E+ LR P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+L + Y DR+++ L+ ++ G L + L + D + E A L
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL-------QKHGRFDEQRSATFMEELADALH 128
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ HE VIHRD K N+L+ K++DFG S A + GT Y+ P
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPP 181
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E K D++ GV+ E L G P D
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEES- 146
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 95 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEES- 146
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 147 --NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 138 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 189
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 141 PYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+L+ L + ++ R V +Y+ G L H+ KL E + E +
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-------QRQRKLPEEHARFYSAEISLA 133
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L +LHE +I+RD K N+LLD H K++D+G+ K G G ++ GT Y+
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYI 188
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDV 294
APE D ++ GV++ E++ GR P D+
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 129
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ GR+VAIK++D Q + EV ++ L
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 70
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L L+ +Y + G + ++L A+G + + ++ R +
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGR---MKEKEARSKFR---QIVSA 123
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + GG + T G+ Y
Sbjct: 124 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDT-FCGSPPYA 177
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 178 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 19/212 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLM--DQAGKQG-EDEFKMEVELLGRLRSPY 142
F +G G FG VY + + A+K++ Q K+G E + + E+E+ LR P
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+L + Y DR+++ L+ ++ G L + L + D + E A L
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKEL-------QKHGRFDEQRSATFMEELADALH 128
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ HE VIHRD K N+L+ K++DFG S A + GT Y+ P
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGW----SVHAPSLRRRXMCGTLDYLPP 181
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E K D++ GV+ E L G P D
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L + N S++ +L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 204
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 141 PYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+L+ L + ++ R V +Y+ G L H+ KL E + E +
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-------QRQRKLPEEHARFYSAEISLA 122
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L +LHE +I+RD K N+LLD H K++D+G+ K G G ++ GT Y+
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYI 177
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDV 294
APE D ++ GV++ E++ GR P D+
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 141 PYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+L+ L + ++ R V +Y+ G L H+ KL E + E +
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-------QRQRKLPEEHARFYSAEISLA 165
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L +LHE +I+RD K N+LLD H K++D+G+ K G G ++ GT Y+
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG--LRPGDTTSTFCGTPNYI 220
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDV 294
APE D ++ GV++ E++ GR P D+
Sbjct: 221 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 93 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 143
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 144 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 204
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKL--MDQAGKQGEDEFKMEVELLGRLRSPYLL 144
+ K VG G +G+VY+ S GR VA+K +D + E+ LL L P ++
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 145 ALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
+L+ R L LV+++M ++ L N + +++++I L + +G+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAH 134
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
H+H ++HRD K N+L++ + K++DFGLA+ + T + T Y AP+
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 263 YAL-TGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRL 311
+ + +T D++S G + E++TG KP GV LP++
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITG-------KPLFPGVTDDDQLPKI 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 39/223 (17%)
Query: 93 VGHGGFGLVYRGVLSNG-----------RKVAIKLM-DQAGKQGEDEFKMEVELLGRL-R 139
+G G FG V VL+ KVA+K++ A ++ + E+E++ + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETR 189
++ LLG C+ L ++ +Y + G L+E+L Y N S++ +L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
+ A + A+G+E+L S IHRD + N+L+ ++ K++DFGLA + H+
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA-----RDIHHID 245
Query: 250 TRVLGTQG-----YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
T G ++APE T +SDV+S+GV+L E+ T
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 141 PYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P+L+ L + ++ R V +Y+ G L H+ KL E + E +
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-------QRQRKLPEEHARFYSAEISLA 118
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L +LHE +I+RD K N+LLD H K++D+G+ K G G ++ GT Y+
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL--RPGDTTSXFCGTPNYI 173
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDV 294
APE D ++ GV++ E++ GR P D+
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 85 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 135
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 136 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKL--MDQAGKQGEDEFKMEVELLGRLRSPYLL 144
+ K VG G +G+VY+ S GR VA+K +D + E+ LL L P ++
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 145 ALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLEF 202
+L+ R L LV+++M ++ L N + +++++I L + +G+
Sbjct: 83 SLIDVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAH 134
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
H+H ++HRD K N+L++ + K++DFGLA+ + T + T Y AP+
Sbjct: 135 CHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPD 189
Query: 263 YAL-TGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRL 311
+ + +T D++S G + E++TG KP GV LP++
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITG-------KPLFPGVTDDDQLPKI 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 93 VGHGGFGLVY--RGVLSNGRKVAIKLMD-QAGKQGEDEFKM-EVELLGRLRS---PYLLA 145
+G G +G V+ R + + GR VA+K + Q G++G + EV +L L + P ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 146 LLGYCSDRRK------LLVYDYMANGGLQEHL--YPANGSNSVASKLDWETRLRIALEAA 197
L C+ R LV++++ + L +L P G + ET + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT-------ETIKDMMFQLL 130
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+FLH H V+HRD K NIL+ + K++DFGLA+I S + T V+ T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLW 184
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELL 286
Y APE L T D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 93 VGHGGFGLVY--RGVLSNGRKVAIKLMD-QAGKQGEDEFKM-EVELLGRLRS---PYLLA 145
+G G +G V+ R + + GR VA+K + Q G++G + EV +L L + P ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 146 LLGYCSDRRK------LLVYDYMANGGLQEHL--YPANGSNSVASKLDWETRLRIALEAA 197
L C+ R LV++++ + L +L P G + ET + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT-------ETIKDMMFQLL 130
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+FLH H V+HRD K NIL+ + K++DFGLA+I S + T V+ T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLW 184
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELL 286
Y APE L T D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 29/209 (13%)
Query: 93 VGHGGFGLVY--RGVLSNGRKVAIKLMD-QAGKQGEDEFKM-EVELLGRLRS---PYLLA 145
+G G +G V+ R + + GR VA+K + Q G++G + EV +L L + P ++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 146 LLGYCSDRRK------LLVYDYMANGGLQEHL--YPANGSNSVASKLDWETRLRIALEAA 197
L C+ R LV++++ + L +L P G + ET + +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPT-------ETIKDMMFQLL 130
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+FLH H V+HRD K NIL+ + K++DFGLA+I S + T V+ T
Sbjct: 131 RGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLW 184
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELL 286
Y APE L T D++S G + E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 75 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 125
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 79 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 129
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 73 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEE-- 123
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 124 -SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 24/217 (11%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 56 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGLQEHLY---------PANG-SNSVASKLDWETRL 190
++ LLG C+ +LV +Y G L L PA +NS AS D L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD---LL 167
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+ + A+G+ FL S IHRD + N+LL AK+ DFGLA+ + + V
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVA----IKLMDQA-GKQGEDEFKM-EVELLGRLRS 140
+ K + +G G F VY+ N ++ IKL ++ K G + + E++LL L
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ LL + + LV+D+M E + N S + L +G
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIK-----AYMLMTLQG 124
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGS-DKAGGHVSTRVLGTQG 257
LE+LH+H ++HRD K +N+LLD+N K++DFGLAK GS ++A H T+
Sbjct: 125 LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV----TRW 177
Query: 258 YVAPEYALTGHLT-TKSDVYSYGVVLLELLTGRVPI 292
Y APE + D+++ G +L ELL RVP
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM----EVELLGR 137
AT + +G G +G VY+ +G VA+K + GE+ + EV LL R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRV--PNGEEGLPISTVREVALLRR 59
Query: 138 LRS---PYLLALLGYCSDRRK------LLVYDYMANGGLQEHLYPANGSNSVASKLDWET 188
L + P ++ L+ C+ R LV++++ + L+ +L + L ET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLPAET 113
Query: 189 RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +GL+FLH +C ++HRD K NIL+ K++DFGLA+I S +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--- 167
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
V+ T Y APE L T D++S G + E+
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 93 VGHGGFG-LVYRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G FG + +GR+ IK ++ + + +E + EV +L ++ P ++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 150 CSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASK-LDWETRLRIALEAAKGLEFLHEHC 207
+ L +V DY G L + + G + LDW ++ +AL+ H H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK--------HVH- 142
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
++HRD KS NI L K+ ++ DFG+A++ + ++ +GT Y++PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--ELARACIGTPYYLSPEICENK 200
Query: 268 HLTTKSDVYSYGVVLLELLT 287
KSD+++ G VL EL T
Sbjct: 201 PYNNKSDIWALGCVLYELCT 220
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 437 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEESN 489
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 61/327 (18%)
Query: 72 LQVFTFKQLHSATGGFSKSNVV-----GHGGFGLVYRGVLSN--GR----KVAIKLMDQA 120
L V FK L F + N+V G G FG V + + GR VA+K++ +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 121 GKQGE-DEFKMEVELLGRLRSPYLLALLGYCS-DRRKLLVYDYMANGGLQEHL------- 171
E + E +L ++ P+++ L G CS D LL+ +Y G L+ L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 172 --YPANGSNSVASKLDWETR--------LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNI 221
Y +G + +S LD + A + ++G+++L E ++HRD + NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNI 181
Query: 222 LLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY----ALTGHL-TTKSDVY 276
L+ + K+SDFGL++ ++ + V +QG + ++ +L H+ TT+SDV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEE-----DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 277 SYGVVLLELLT-GRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVI 335
S+GV+L E++T G P P L L +E D E Y +
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPE--------RLFNLLKTGHRMERPDNCSEEMYRL---- 284
Query: 336 QVAAIAAMCVQPEADYRPLMADVVQSL 362
C + E D RP+ AD+ + L
Sbjct: 285 -----MLQCWKQEPDKRPVFADISKDL 306
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 100/206 (48%), Gaps = 17/206 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIK----LMDQAGKQG-EDEFKMEVELLGRLRSPYLLALL 147
+G G FG V +G + V L ++A +DE E ++ +L +PY++ ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 148 GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
G C +LV + G L ++L + V K + + + + G+++L E
Sbjct: 438 GICEAESWMLVMEMAELGPLNKYL---QQNRHVKDK----NIIELVHQVSMGMKYLEESN 490
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+LL +AK+SDFGL+K + +D+ T + APE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 267 GHLTTKSDVYSYGVVLLELLT-GRVP 291
++KSDV+S+GV++ E + G+ P
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +YM G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +YM G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 81 HSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLM--DQAGKQG-EDEFKMEVE 133
H F +G G FG VY L+ +K VA+K++ Q K+G E + + E+E
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVY---LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 134 LLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+ L P +L L Y DRR++ L+ +Y G L + L + D + I
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-------QKSCTFDEQRTATI 128
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
E A L + H VIHRD K N+LL K++DFG S A +
Sbjct: 129 MEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGW----SVHAPSLRRKTM 181
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
GT Y+ PE K D++ GV+ ELL G P +
Sbjct: 182 CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 87 FSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
++ + +G G +G+V Y V N +VAIK + Q + + E+++L R R
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASK-LDWETRLRIALEAAKGLE 201
++ + +D + + M + L HL A+ + ++ L + + +GL+
Sbjct: 103 IIGI----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYV 259
++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYR 214
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
APE L TKS D++S G +L E+L+ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 92 VVGHGGFGLVYRGVLSNGRKV-AIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALL 147
V+G G FG V +KV A+KL+ + + F E +++ SP+++ L
Sbjct: 82 VIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 141
Query: 148 -GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ D+ +V +YM G L + + V K W + A E L+ +H
Sbjct: 142 CAFQDDKYLYMVMEYMPGGDLVNLM----SNYDVPEK--W-AKFYTA-EVVLALDAIH-- 191
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K N+LLDK+ H K++DFG + H T V GT Y++PE +
Sbjct: 192 -SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLKS 249
Query: 267 ----GHLTTKSDVYSYGVVLLELLTGRVPI 292
G+ + D +S GV L E+L G P
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM----EVELLGR 137
AT + +G G +G VY+ +G VA+K + GE+ + EV LL R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRR 59
Query: 138 LRS---PYLLALLGYCSDRRK------LLVYDYMANGGLQEHLYPANGSNSVASKLDWET 188
L + P ++ L+ C+ R LV++++ + L+ +L + L ET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLPAET 113
Query: 189 RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +GL+FLH +C ++HRD K NIL+ K++DFGLA+I S +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--- 167
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
V+ T Y APE L T D++S G + E+
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 102/218 (46%), Gaps = 28/218 (12%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM----EVELLGR 137
AT + +G G +G VY+ +G VA+K + GE+ + EV LL R
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRR 59
Query: 138 LRS---PYLLALLGYCSDRRK------LLVYDYMANGGLQEHLYPANGSNSVASKLDWET 188
L + P ++ L+ C+ R LV++++ + L+ +L + L ET
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLPAET 113
Query: 189 RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +GL+FLH +C ++HRD K NIL+ K++DFGLA+I S +
Sbjct: 114 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--- 167
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
V+ T Y APE L T D++S G + E+
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 61/327 (18%)
Query: 72 LQVFTFKQLHSATGGFSKSNVV-----GHGGFGLVYRGVLSN--GR----KVAIKLMDQA 120
L V FK L F + N+V G G FG V + + GR VA+K++ +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 121 GKQGE-DEFKMEVELLGRLRSPYLLALLGYCS-DRRKLLVYDYMANGGLQEHL------- 171
E + E +L ++ P+++ L G CS D LL+ +Y G L+ L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 172 --YPANGSNSVASKLDWETR--------LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNI 221
Y +G + +S LD + A + ++G+++L E ++HRD + NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181
Query: 222 LLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY----ALTGHL-TTKSDVY 276
L+ + K+SDFGL++ ++ + V +QG + ++ +L H+ TT+SDV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEE-----DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 277 SYGVVLLELLT-GRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVI 335
S+GV+L E++T G P P L L +E D E Y +
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPE--------RLFNLLKTGHRMERPDNCSEEMYRL---- 284
Query: 336 QVAAIAAMCVQPEADYRPLMADVVQSL 362
C + E D RP+ AD+ + L
Sbjct: 285 -----MLQCWKQEPDKRPVFADISKDL 306
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ GR+VAIK++D Q + EV ++ L
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L L+ +Y + G + ++L A+G + + ++ R +
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV-AHGR---MKEKEARSKFR---QIVSA 126
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + GG + G Y
Sbjct: 127 VQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFS--NEFTVGGKLDA-FCGAPPYA 180
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 99
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 100 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 158
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 159 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G T + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 209 AK----RVKGATWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
Query: 297 P 297
P
Sbjct: 264 P 264
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA+K++D Q + EV ++ L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA+K++D Q + EV ++ L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 26/212 (12%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLMDQAG-KQGEDEFKM--EVELLGRLRSPYLL 144
V+G G FG V +L G++ A+K++ + KQ D+ + EV+LL +L P ++
Sbjct: 39 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L + D+ + + GG L+ S S++D RI + G+ ++H
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGG---ELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 149
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
++ ++HRD K N+LL+ K+ + ++ DFGL+ +A + ++ GT Y+AP
Sbjct: 150 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI-GTAYYIAP 203
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E L G K DV+S GV+L LL+G P +
Sbjct: 204 E-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 144/327 (44%), Gaps = 61/327 (18%)
Query: 72 LQVFTFKQLHSATGGFSKSNVV-----GHGGFGLVYRGVLSN--GR----KVAIKLMDQA 120
L V FK L F + N+V G G FG V + + GR VA+K++ +
Sbjct: 5 LSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN 64
Query: 121 GKQGE-DEFKMEVELLGRLRSPYLLALLGYCS-DRRKLLVYDYMANGGLQEHL------- 171
E + E +L ++ P+++ L G CS D LL+ +Y G L+ L
Sbjct: 65 ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVG 124
Query: 172 --YPANGSNSVASKLDWETR--------LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNI 221
Y +G + +S LD + A + ++G+++L E ++HRD + NI
Sbjct: 125 PGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI 181
Query: 222 LLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY----ALTGHL-TTKSDVY 276
L+ + K+SDFGL++ ++ + V +QG + ++ +L H+ TT+SDV+
Sbjct: 182 LVAEGRKMKISDFGLSRDVYEE-----DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 277 SYGVVLLELLT-GRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVI 335
S+GV+L E++T G P P L L +E D E Y +
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPE--------RLFNLLKTGHRMERPDNCSEEMYRL---- 284
Query: 336 QVAAIAAMCVQPEADYRPLMADVVQSL 362
C + E D RP+ AD+ + L
Sbjct: 285 -----MLQCWKQEPDKRPVFADISKDL 306
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 90 SNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQ-----GEDEFKMEVELLGRLRSPYLL 144
+ ++G G FG VY GV +N + I + + K+ +++F E ++ L P+++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L+G + ++ + G L +L S V T + +L+ K + +L
Sbjct: 73 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL------TLVLYSLQICKAMAYLE 126
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYA 264
S +HRD NIL+ K+ DFGL++ D+ S L + +++PE
Sbjct: 127 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESI 182
Query: 265 LTGHLTTKSDVYSYGVVLLELLT-GRVPI 292
TT SDV+ + V + E+L+ G+ P
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 16 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 65
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 66 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 124
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 125 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGF 174
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 175 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 229
Query: 297 P 297
P
Sbjct: 230 P 230
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 90 SNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQ-----GEDEFKMEVELLGRLRSPYLL 144
+ ++G G FG VY GV +N + I + + K+ +++F E ++ L P+++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L+G + ++ + G L +L S V T + +L+ K + +L
Sbjct: 89 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL------TLVLYSLQICKAMAYLE 142
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYA 264
S +HRD NIL+ K+ DFGL++ D+ S L + +++PE
Sbjct: 143 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESI 198
Query: 265 LTGHLTTKSDVYSYGVVLLELLT-GRVPI 292
TT SDV+ + V + E+L+ G+ P
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 90 SNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQ-----GEDEFKMEVELLGRLRSPYLL 144
+ ++G G FG VY GV +N + I + + K+ +++F E ++ L P+++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L+G + ++ + G L +L S V T + +L+ K + +L
Sbjct: 77 KLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL------TLVLYSLQICKAMAYLE 130
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYA 264
S +HRD NIL+ K+ DFGL++ D+ S L + +++PE
Sbjct: 131 ---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPESI 186
Query: 265 LTGHLTTKSDVYSYGVVLLELLT-GRVPI 292
TT SDV+ + V + E+L+ G+ P
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA+K++D Q + EV ++ L
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 66 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGWMK-----EKEARAKFR-QIVSA 118
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G+ Y
Sbjct: 119 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYA 172
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 173 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA++++D Q + EV ++ L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDEFCGSPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 30 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 79
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 80 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 138
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 139 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 189 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 243
Query: 297 P 297
P
Sbjct: 244 P 244
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLY---PANGSNSV------ASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L P S ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA+K++D Q + EV ++ L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDAFCGAPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 48/278 (17%)
Query: 108 NGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRK---LLVYDYMA 163
G VA+K L + G Q ++ E+E+L L +++ G C D+ + LV +Y+
Sbjct: 37 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 96
Query: 164 NGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILL 223
G L+++L P + L A + +G+ +LH + IHR + N+LL
Sbjct: 97 LGSLRDYL-PRHCVGLAQL-------LLFAQQICEGMAYLH---AQHYIHRALAARNVLL 145
Query: 224 DKNFHAKVSDFGLAKIGSDKAGGHVSTRVL----GTQGYVAPEYALTGHLTTKSDVYSYG 279
D + K+ DFGLAK + GH RV + APE SDV+S+G
Sbjct: 146 DNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 202
Query: 280 VVLLELLTGRVPIDVNKP----------SGEGVLVSWALPRLTDREKILEIMDPALEGQY 329
V L ELLT D N+ +G + L L +R + L D
Sbjct: 203 VTLYELLTY---CDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPD------- 252
Query: 330 SMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
+ ++ + C + EA +RP Q+LVP+++
Sbjct: 253 --RCPCEIYHLMKNCWETEASFRP----TFQNLVPILQ 284
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 120/278 (43%), Gaps = 48/278 (17%)
Query: 108 NGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRK---LLVYDYMA 163
G VA+K L + G Q ++ E+E+L L +++ G C D+ + LV +Y+
Sbjct: 36 TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVP 95
Query: 164 NGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILL 223
G L+++L P + L A + +G+ +LH + IHR + N+LL
Sbjct: 96 LGSLRDYL-PRHCVGLAQL-------LLFAQQICEGMAYLH---AQHYIHRALAARNVLL 144
Query: 224 DKNFHAKVSDFGLAKIGSDKAGGHVSTRVL----GTQGYVAPEYALTGHLTTKSDVYSYG 279
D + K+ DFGLAK + GH RV + APE SDV+S+G
Sbjct: 145 DNDRLVKIGDFGLAKAVPE---GHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFG 201
Query: 280 VVLLELLTGRVPIDVNKP----------SGEGVLVSWALPRLTDREKILEIMDPALEGQY 329
V L ELLT D N+ +G + L L +R + L D
Sbjct: 202 VTLYELLTY---CDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPD------- 251
Query: 330 SMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVK 367
+ ++ + C + EA +RP Q+LVP+++
Sbjct: 252 --RCPCEIYHLMKNCWETEASFRP----TFQNLVPILQ 283
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 24 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 73
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 74 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 132
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 133 FXEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 182
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 183 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 237
Query: 297 P 297
P
Sbjct: 238 P 238
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 56 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGLQEHLY---------PANG-SNSVASKLDWETRL 190
++ LLG C+ +LV +Y G L L PA +NS S D L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD---LL 167
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+ + A+G+ FL S IHRD + N+LL AK+ DFGLA+ + + V
Sbjct: 168 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 224
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG++L E+ +
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 56 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGLQEHL---YPANGSNSVASKLDWETRLRIALEAA 197
++ LLG C+ +LV +Y G L L A+ L+ L + + A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+G+ FL S IHRD + N+LL AK+ DFGLA+ + + V
Sbjct: 171 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG++L E+ +
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 26/212 (12%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLMDQAG-KQGEDEFKM--EVELLGRLRSPYLL 144
V+G G FG V +L G++ A+K++ + KQ D+ + EV+LL +L P ++
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L + D+ + + GG L+ S S++D RI + G+ ++H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGG---ELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 143
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
++ ++HRD K N+LL+ K+ + ++ DFGL+ +A + ++ GT Y+AP
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI-GTAYYIAP 197
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E L G K DV+S GV+L LL+G P +
Sbjct: 198 E-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADE 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 108/215 (50%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ +Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N +++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA++++D Q + EV ++ L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV-AHGRMK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G+ Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 14/210 (6%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 48 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 102
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGLQEHL---YPANGSNSVASKLDWETRLRIALEAA 197
++ LLG C+ +LV +Y G L L A+ L+ L + + A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+G+ FL S IHRD + N+LL AK+ DFGLA+ + + V
Sbjct: 163 QGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG++L E+ +
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 27/219 (12%)
Query: 83 ATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGED-----EFKMEVELLG 136
AT + +G G +G VY+ +G VA+K + G EV LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 137 RLRS---PYLLALLGYCSDRRK------LLVYDYMANGGLQEHLYPANGSNSVASKLDWE 187
RL + P ++ L+ C+ R LV++++ + L+ +L + L E
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-----DKAPPPGLPAE 120
Query: 188 TRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGH 247
T + + +GL+FLH +C ++HRD K NIL+ K++DFGLA+I S +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-- 175
Query: 248 VSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
T V+ T Y APE L T D++S G + E+
Sbjct: 176 -LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 267
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 324 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 380
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFL----AKAGPPASIVPLMRQNRT 422
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FXEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FXEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPYLLALLG 148
VG G +G V + +G KVAIK + + Q E K E+ LL ++ ++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 149 YCSDRRKLL-VYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ L YD Y+ +Q L G K+ + + + KGL+++H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH-- 161
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S V+HRD K N+ ++++ K+ DFGLA+ + G+V TR Y APE L+
Sbjct: 162 -SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 215
Query: 267 G-HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ E+LTG+
Sbjct: 216 WMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FXEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 36/215 (16%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALL-- 147
+G G +G V+ G G KVA+K+ ++A E E V +R +L +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTV----LMRHENILGFIAA 99
Query: 148 ---GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
G S + L+ DY NG L ++L ++ LD ++ L++A + GL LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYLK--------STTLDAKSMLKLAYSSVSGLCHLH 151
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHV--STRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA K SD + +TRV GT+
Sbjct: 152 TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTK 210
Query: 257 GYVAPEY---ALT-GHLTT--KSDVYSYGVVLLEL 285
Y+ PE +L H + +D+YS+G++L E+
Sbjct: 211 RYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 50 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 99
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 100 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----- 153
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ + R A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 154 -RRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 209 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 263
Query: 297 P 297
P
Sbjct: 264 P 264
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----- 132
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ + R A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 133 -RRIGRFAEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 53 VDREEKGESGKLEVTTDNGLQVF-TFKQLHSATGGFSKSNVVGH---------GGFGLVY 102
VD + K GK V+++ VF +KQ + +V+ H G FG+V+
Sbjct: 115 VDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVH 174
Query: 103 RGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYCSDRRKLLVYD 160
R + G A K + + ++ + E++ + LR P L+ L + D +++Y+
Sbjct: 175 RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234
Query: 161 YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSN 220
+M+ G L E + A+ N K+ + + + KGL +HE+ +H D K N
Sbjct: 235 FMSGGELFEKV--ADEHN----KMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPEN 285
Query: 221 ILL--DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSY 278
I+ ++ K+ DFGL K V+T GT + APE A + +D++S
Sbjct: 286 IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSV 342
Query: 279 GVVLLELLTGRVPI 292
GV+ LL+G P
Sbjct: 343 GVLSYILLSGLSPF 356
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 93 VGHGGFGLVYR----GVLSNGRK----VAIKLM-DQAGKQGEDEFKMEVELLGRL-RSPY 142
+G G FG V G+ + K VA+K++ D A ++ + E+E++ + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ L ++ Y + G L+E+L Y + + ++ ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
+ A+G+E+L S IHRD + N+L+ +N K++DFGLA+ ++ +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+S+GV++ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 24/216 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV----AIKLMDQAGKQGEDEFK---MEVELLGRLR 139
F+ V+G G FG V +LS + A+K++ + +D+ + +E +L
Sbjct: 22 FNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 140 SPYLLALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P L L C + R V +Y+ G L H+ + + A E A
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI-------QQVGRFKEPHAVFYAAEIA 131
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
GL FL S +I+RD K N++LD H K++DFG+ K + G + GT
Sbjct: 132 IGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPD 186
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
Y+APE D +++GV+L E+L G+ P +
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 43/224 (19%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-------MEVELLGRLRSPYLL 144
++G G +G VY+G L + R VA+K+ A +Q K ME + + R +++
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIAR----FIV 74
Query: 145 ALLGYCSDRRK--LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+D R LLV +Y NG L ++L S+ + DW + R+A +GL +
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL-------SLHTS-DWVSSCRLAHSVTRGLAY 126
Query: 203 LH------EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA------KIGSDKAGGHVST 250
LH +H P + HRD S N+L+ + +SDFGL+ ++ + +
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 251 RVLGTQGYVAPEYALTGHLTTKS--------DVYSYGVVLLELL 286
+GT Y+APE L G + + D+Y+ G++ E+
Sbjct: 187 SEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+A G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 24/211 (11%)
Query: 92 VVGHGGFGLVYRGVLSNGRKV----AIKLMDQAGKQGEDEFK---MEVELLGRLRSPYLL 144
V+G G FG V +LS + A+K++ + +D+ + +E +L P L
Sbjct: 348 VLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 145 ALLGYC--SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
L C + R V +Y+ G L H+ + + A E A GL F
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHI-------QQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
L S +I+RD K N++LD H K++DFG+ K + G + GT Y+APE
Sbjct: 458 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPE 512
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
D +++GV+L E+L G+ P +
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 87
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 88 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 140
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G T + GT Y+A
Sbjct: 141 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWT-LCGTPEYLA 192
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 193 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 26/212 (12%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLMDQAG-KQGEDEFKM--EVELLGRLRSPYLL 144
V+G G FG V +L G++ A+K++ + KQ D+ + EV+LL +L P ++
Sbjct: 56 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L + D+ + + GG L+ S S++D RI + G+ ++H
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGG---ELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 166
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
++ ++HRD K N+LL+ K+ + ++ DFGL+ +A + ++ GT Y+AP
Sbjct: 167 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI-GTAYYIAP 220
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E L G K DV+S GV+L LL+G P +
Sbjct: 221 E-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 190
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 246
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 247 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 303
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFLAK----AGPPASIVPLMRQNRT 345
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G FG VY+ G A K+++ ++ +++ +E+E+L PY++ LLG Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLHEH 206
D + ++ ++ G + +++ +LD E ++++ + + L FLH
Sbjct: 87 HDGKLWIMIEFCPGGAV----------DAIMLELDRGLTEPQIQVVCRQMLEALNFLH-- 134
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K+ N+L+ +++DFG++ + +GT ++APE +
Sbjct: 135 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 267 GHLTT-----KSDVYSYGVVLLEL 285
+ K+D++S G+ L+E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 26/254 (10%)
Query: 53 VDREEKGESGKLEVTTDNGLQVF-TFKQLHSATGGFSKSNVVGH---------GGFGLVY 102
VD + K GK V+++ VF +KQ + +V+ H G FG+V+
Sbjct: 9 VDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVH 68
Query: 103 RGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYCSDRRKLLVYD 160
R + G A K + + ++ + E++ + LR P L+ L + D +++Y+
Sbjct: 69 RVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 128
Query: 161 YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSN 220
+M+ G L E + A+ N K+ + + + KGL +HE+ +H D K N
Sbjct: 129 FMSGGELFEKV--ADEHN----KMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPEN 179
Query: 221 ILL--DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSY 278
I+ ++ K+ DFGL K V+T GT + APE A + +D++S
Sbjct: 180 IMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSV 236
Query: 279 GVVLLELLTGRVPI 292
GV+ LL+G P
Sbjct: 237 GVLSYILLSGLSPF 250
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 97/222 (43%), Gaps = 26/222 (11%)
Query: 81 HSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAG--KQGEDEFKMEVE- 133
H+ F V+G G FG V +L+ + A+K++ + K+ E++ M
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKV---LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 134 -LLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
LL ++ P+L+ L + + + V DY+ G L HL + E R R
Sbjct: 91 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQ--------RERCFLEPRAR 142
Query: 192 I-ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
A E A L +LH S +++RD K NILLD H ++DFGL K + ++
Sbjct: 143 FYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTS 197
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT Y+APE D + G VL E+L G P
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPYLLALLG 148
VG G +G V + +G KVAIK + + Q E K E+ LL ++ ++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 149 YCSDRRKLL-VYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ L YD Y+ +Q L G K+ + + + KGL+++H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S V+HRD K N+ ++++ K+ DFGLA+ + G+V TR Y APE L+
Sbjct: 144 -SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVILS 197
Query: 267 G-HLTTKSDVYSYGVVLLELLTGRV 290
H D++S G ++ E+LTG+
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 26/212 (12%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLMDQAG-KQGEDEFKM--EVELLGRLRSPYLL 144
V+G G FG V +L G++ A+K++ + KQ D+ + EV+LL +L P ++
Sbjct: 57 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L + D+ + + GG L+ S S++D RI + G+ ++H
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGG---ELFDEIISRKRFSEVD---AARIIRQVLSGITYMH 167
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
++ ++HRD K N+LL+ K+ + ++ DFGL+ +A + ++ GT Y+AP
Sbjct: 168 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST--HFEASKKMKDKI-GTAYYIAP 221
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E L G K DV+S GV+L LL+G P +
Sbjct: 222 E-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 101/204 (49%), Gaps = 26/204 (12%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G FG VY+ G A K+++ ++ +++ +E+E+L PY++ LLG Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLHEH 206
D + ++ ++ G + +++ +LD E ++++ + + L FLH
Sbjct: 79 HDGKLWIMIEFCPGGAV----------DAIMLELDRGLTEPQIQVVCRQMLEALNFLH-- 126
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K+ N+L+ +++DFG++ + +GT ++APE +
Sbjct: 127 -SKRIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 267 GHLTT-----KSDVYSYGVVLLEL 285
+ K+D++S G+ L+E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G T + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWT-LCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLR 139
S++ F + +G+G + VY+G+ + G VA+K + ++G + E+ L+ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
++ L KL LV+++M N L++++ N+ L+ + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDND-LKKYMDSRTVGNT-PRGLELNLVKYFQWQLLQ 119
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
GL F HE+ ++HRD K N+L++K K+ DFGLA+ S V T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWY 174
Query: 259 VAPEYALTGHLT--TKSDVYSYGVVLLELLTGR 289
AP+ L G T T D++S G +L E++TG+
Sbjct: 175 RAPD-VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE L+ D ++ GV++ ++ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 21/226 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAGKQGEDEFK---MEVELLGRLRSPY 142
F +G G FG V ++ +K+ A+K M++ +E + E++++ L P+
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
L+ L D + +V D + G L+ HL +V K ET E L+
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-----QQNVHFKE--ETVKLFICELVMALD 129
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+L +IHRD K NILLD++ H ++DF +A + + T + GT+ Y+AP
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ---ITTMAGTKPYMAP 183
Query: 262 EYALT---GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLV 304
E + + D +S GV ELL GR P + + +V
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 40/227 (17%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGED------EFKMEVELLGRLRSPYLLA 145
+G G +G+V++ + G VA+K + A + D E + EL G LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
+L +DR LV+DYM + L+ +N L+ + + + K +++LH
Sbjct: 77 VLRADNDRDVYLVFDYM-----ETDLHAVIRANI----LEPVHKQYVVYQLIKVIKYLH- 126
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSDKAGGHVS-------------- 249
S ++HRD K SNILL+ H KV+DFGL++ + + ++
Sbjct: 127 --SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 250 ---TRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPI 292
T + T+ Y APE L TK D++S G +L E+L G+ PI
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PI 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+I L K L L E+ +IHRD K SNILLD++ + K+ DFG++ D T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA---KT 183
Query: 251 RVLGTQGYVAPE----YALTGHLTTKSDVYSYGVVLLELLTGRVP 291
R G + Y+APE A +SDV+S G+ L EL TGR P
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKM------EVELLGRLR 139
+ K +G G +G+V++ G+ VAIK + ED+ + E+ +L +L+
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRMLKQLK 60
Query: 140 SPYLLALLGYCSDRRKL-LVYDYMANGGLQE-HLYPANGSNSVASKLDWETRLRIALEAA 197
P L+ LL +R+L LV++Y + L E Y + + W+T
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------L 112
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI---GSDKAGGHVSTRVLG 254
+ + F H+H IHRD K NIL+ K+ K+ DFG A++ SD V+TR
Sbjct: 113 QAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR--- 166
Query: 255 TQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y +PE + DV++ G V ELL+G VP+
Sbjct: 167 --WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPL 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSN----GRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + VAIK ++F E + + P+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 133 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-WMAPESINF 186
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 147
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 203
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 204 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 260
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFLAK----AGPPASIVPLMRQNRT 302
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 145
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 201
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 202 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 258
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFLAK----AGPPASIVPLMRQNRT 300
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+++D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+APE ++ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG--KQGEDEFKM-EVELLGRLRSPY 142
F + +G G FG V + G A+K++D+ K E E + E +L + P+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
L+ L D L +V +Y G + HL + ++ A + E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFE 155
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH S +I+RD K N+++D+ + KV+DFGLAK + G + + GT Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGR-TWXLCGTPEYLAP 207
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
E L+ D ++ GV++ E+ G P ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 136
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 192
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 193 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 249
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK----AGPPASIVPLMRQNRT 291
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 128/286 (44%), Gaps = 29/286 (10%)
Query: 93 VGHGGFGLV-YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V V S+G+ VA+K MD +Q + EV ++ + ++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L LH
Sbjct: 92 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIAAVCLAVLQALSVLHAQG--- 140
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCA----QVSKEVPRRKXLVGTPYWMAPELISRLP 196
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREKILEIMDPALEG- 327
+ D++S G++++E++ G P P ++ LP R K L + P+L+G
Sbjct: 197 YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGF 253
Query: 328 --QYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNRS 371
+ +++ Q A A + P A S+VPL++ NR+
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFLAK----AGPPASIVPLMRQNRT 295
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 85 GGFSKSNVVGHGGFGLV--YRGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRS 140
G + +G G F V R +L+ G++VA+K++D Q + EV + L
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 141 PYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
P ++ L + L LV +Y + G + ++L A+G + E R + +
Sbjct: 73 PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLV-AHGRXK-----EKEARAKFR-QIVSA 125
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
+++ H+ ++HRD K+ N+LLD + + K++DFG + ++ G+ G Y
Sbjct: 126 VQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS---NEFTFGNKLDAFCGAPPYA 179
Query: 260 APE-YALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
APE + + + DV+S GV+L L++G +P D
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+IA+ K LE LH S VIHRD K SN+L++ K+ DFG++ D +
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 251 RVLGTQGYVAPEYALTGHL-----TTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
G + Y+APE + L + KSD++S G+ ++EL R P D S
Sbjct: 215 ---GCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------S 259
Query: 306 WALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
W P ++++E P L E + + C++ + RP +++Q
Sbjct: 260 WGTP-FQQLKQVVEEPSPQLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQ 310
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK--VAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYL 143
+++ +G G +G+V + RK VAIK + Q + + E+++L R R +
Sbjct: 45 YTQLQYIGEGAYGMV-SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 144 LALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+ + + D Y+ ++ LY S +++ + + +GL++
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN----DHICYFLYQILRGLKY 159
Query: 203 LHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVA 260
+H S V+HRD K SN+L++ K+ DFGLA+I +D H T + T+ Y A
Sbjct: 160 IH---SANVLHRDLKPSNLLINTTCDLKICDFGLARI-ADPEHDHTGFLTEXVATRWYRA 215
Query: 261 PEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
PE L TKS D++S G +L E+L+ R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 98/226 (43%), Gaps = 22/226 (9%)
Query: 78 KQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQGEDE-FKMEVE 133
KQ+ F V+G G FG V L N KV A+K++++ K+ E F+ E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 134 LLGRLRSPYLLAL-LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
+L S ++ L + D LV DY G L L + + I
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVI 186
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFG-LAKIGSDKAGGHVSTR 251
A+++ L + +HRD K NIL+D N H +++DFG K+ D G S+
Sbjct: 187 AIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMED--GTVQSSV 235
Query: 252 VLGTQGYVAPEYALT-----GHLTTKSDVYSYGVVLLELLTGRVPI 292
+GT Y++PE G + D +S GV + E+L G P
Sbjct: 236 AVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVEL 134
Q+ ++ + +G G +G+V Y V N +VAIK + Q + + E+++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKI 74
Query: 135 LGRLRSPYLLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L R R ++ + + D Y+ ++ LY + +++ +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFL 130
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TR 251
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTE 186
Query: 252 VLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 93 VGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQ-GEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG V+ S+G + IK +++ Q ++ + E+E+L L P ++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
D + +V + G L E + A S+ ++ + A L + H S
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA---LAYFH---SQ 143
Query: 210 PVIHRDFKSSNILL-DKNFHA--KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
V+H+D K NIL D + H+ K+ DFGLA++ K+ H ST GT Y+APE
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEH-STNAAGTALYMAPE-VFK 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRVPI 292
+T K D++S GVV+ LLTG +P
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPYLLALLGY 149
VG G +G V+RG G VA+K+ + E + E EL LR +L +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 150 -----CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
S + L+ Y G L ++L + LD + LRI L A GL LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ--------LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 205 -----EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAG----GHVSTRVLGT 255
P + HRD KS NIL+ KN ++D GLA + S G+ + RV GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRV-GT 180
Query: 256 QGYVAPEYALTGHLTT-------KSDVYSYGVVLLEL 285
+ Y+APE L + + D++++G+VL E+
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVEL 134
Q+ ++ + +G G +G+V Y V N +VAIK + Q + + E+++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKI 74
Query: 135 LGRLRSPYLLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L R R ++ + + D Y+ ++ LY + +++ +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFL 130
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TR 251
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE 186
Query: 252 VLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 144
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 87 FSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
++ + +G G +G+V Y V N +VAIK + Q + + E+++L R R
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 143 LLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ + + D Y+ ++ LY + +++ + + +GL+
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLK 140
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYV 259
++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y
Sbjct: 141 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYR 196
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
APE L TKS D++S G +L E+L+ R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPYLLALLGY 149
VG G +G V+RG G VA+K+ + E + E EL LR +L +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 150 -----CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
S + L+ Y G L ++L + LD + LRI L A GL LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ--------LTTLDTVSCLRIVLSIASGLAHLH 122
Query: 205 -----EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAG----GHVSTRVLGT 255
P + HRD KS NIL+ KN ++D GLA + S G+ + RV GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRV-GT 180
Query: 256 QGYVAPEYALTGHLTT-------KSDVYSYGVVLLEL 285
+ Y+APE L + + D++++G+VL E+
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 87 FSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
++ + +G G +G+V Y V N +VAIK + Q + + E+++L R R
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 143 LLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ + + D Y+ ++ LY + +++ + + +GL+
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLK 146
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYV 259
++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y
Sbjct: 147 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYR 202
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
APE L TKS D++S G +L E+L+ R
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 87 FSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
++ + +G G +G+V Y V N +VAIK + Q + + E+++L R R
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 143 LLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ + + D Y+ ++ LY + +++ + + +GL+
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLK 138
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYV 259
++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y
Sbjct: 139 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYR 194
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
APE L TKS D++S G +L E+L+ R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 81 HSATGGFSKSNVVGHGGFGLVYRG-VLSNGRKVAIK---LMDQAGKQGEDEFKMEVELLG 136
++ F +G G F VYR L +G VA+K + D + + E++LL
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLK 87
Query: 137 RLRSPYLLALLGYCSDRRKLLVYDYMANGG----LQEHLYPANGSNSVASKLDWETRLRI 192
+L P ++ + +L + +A+ G + +H + + W+ +++
Sbjct: 88 QLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHF--KKQKRLIPERTVWKYFVQL 145
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRV 252
LE +H S V+HRD K +N+ + K+ D GL + S K S +
Sbjct: 146 C----SALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--L 196
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLT 312
+GT Y++PE KSD++S G +L E+ + P +K + +
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC--------- 247
Query: 313 DREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRP 353
+KI + P L + +E+ Q + MC+ P+ + RP
Sbjct: 248 --KKIEQCDYPPLPSDHYSEELRQ---LVNMCINPDPEKRP 283
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVEL 134
Q+ ++ + +G G +G+V Y V N +VAIK + Q + + E+++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKI 74
Query: 135 LGRLRSPYLLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L R R ++ + + D Y+ ++ LY + +++ +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFL 130
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TR 251
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTE 186
Query: 252 VLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT Y+AP L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 38/217 (17%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPYLLALLGY 149
VG G +G V+RG G VA+K+ + E + E EL LR +L +
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 150 -----CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
S + L+ Y G L ++L + LD + LRI L A GL LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ--------LTTLDTVSCLRIVLSIASGLAHLH 151
Query: 205 -----EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAG----GHVSTRVLGT 255
P + HRD KS NIL+ KN ++D GLA + S G+ + RV GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGN-NPRV-GT 209
Query: 256 QGYVAPEYALTGHLTT-------KSDVYSYGVVLLEL 285
+ Y+APE L + + D++++G+VL E+
Sbjct: 210 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 123/252 (48%), Gaps = 38/252 (15%)
Query: 69 DNGLQVFTFK-QLHSA--TG--------GFSKSNVVGHGGFGLVY--RGVLSN--GRKVA 113
D G Q+ T K +L +A TG F V+G G +G V+ R + + G+ A
Sbjct: 27 DGGEQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYA 86
Query: 114 IKLMDQAG----KQGEDEFKMEVELLGRLR-SPYLLAL-LGYCSDRRKLLVYDYMANGGL 167
+K++ +A + + + E ++L +R SP+L+ L + ++ + L+ DY+ G L
Sbjct: 87 MKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL 146
Query: 168 QEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNF 227
HL + + E ++ + E LE LH+ +I+RD K NILLD N
Sbjct: 147 FTHL------SQRERFTEHEVQIYVG-EIVLALEHLHK---LGIIYRDIKLENILLDSNG 196
Query: 228 HAKVSDFGLAK-IGSDKAGGHVSTRVLGTQGYVAPEYAL---TGHLTTKSDVYSYGVVLL 283
H ++DFGL+K +D+ + GT Y+AP+ +GH D +S GV++
Sbjct: 197 HVVLTDFGLSKEFVADET--ERAYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMY 253
Query: 284 ELLTGRVPIDVN 295
ELLTG P V+
Sbjct: 254 ELLTGASPFTVD 265
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 23/216 (10%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLM--DQAGKQGEDEFKMEVELLGRLRSPYLLA 145
++G G FG V G L KVA+K M D + ++ +EF E + P ++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 146 LLGYCSDR------RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
LLG C + + +++ +M G L +L + + +T L+ ++ A G
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG-PKHIPLQTLLKFMVDIALG 159
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTRVLGTQ 256
+E+L +HRD + N +L + V+DFGL+K G G ++ +
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPV--- 213
Query: 257 GYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
++A E T+KSDV+++GV + E+ T G P
Sbjct: 214 KWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 87 FSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
++ + +G G +G+V Y V N +VAIK + Q + + E+++L R R
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 143 LLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ + + D Y+ ++ LY + +++ + + +GL+
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLK 158
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYV 259
++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y
Sbjct: 159 YIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYR 214
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
APE L TKS D++S G +L E+L+ R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+IA+ K LE LH S VIHRD K SN+L++ K+ DFG++ D +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 251 RVLGTQGYVAPEYALTGHL-----TTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
G + Y+APE + L + KSD++S G+ ++EL R P D S
Sbjct: 171 ---GCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----------S 215
Query: 306 WALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
W P ++++E P L E + + C++ + RP +++Q
Sbjct: 216 WGTP-FQQLKQVVEEPSPQLPADKFSAEFVD---FTSQCLKKNSKERPTYPELMQ 266
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 14/217 (6%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLG 136
Q+ ++ + +G G +G+V + N +VAIK + Q + + E+++L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 137 RLRSPYLLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALE 195
R R ++ + + D Y+ ++ LY + +++ + +
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQ 130
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVL 253
+GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T +
Sbjct: 131 ILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYV 186
Query: 254 GTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 18/219 (8%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLV---YRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVEL 134
Q+ ++ + +G G +G+V Y V N +VAIK + Q + + E+++
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKI 74
Query: 135 LGRLRSPYLLALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L R R ++ + + D Y+ ++ LY + +++ +
Sbjct: 75 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFL 130
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TR 251
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 131 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTE 186
Query: 252 VLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 138
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 139 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 194
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 144
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 145
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 146 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 201
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 146
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 147 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 202
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 137
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 138 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 193
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 144
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T+ Y AP
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAP 200
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSN----GRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + VAIK ++F E + + P+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 133 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 186
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 129
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 130 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 183
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPY 142
G + G FG V++ L N VA+K+ KQ ++ E E+ ++
Sbjct: 15 GSLQLLEIKARGRFGCVWKAQLMNDF-VAVKIFPLQDKQS---WQSEREIFSTPGMKHEN 70
Query: 143 LLALL-----GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
LL + G + L+ + G L ++L + + W +A +
Sbjct: 71 LLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLK--------GNIITWNELCHVAETMS 122
Query: 198 KGLEFLHE---HC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHV 248
+GL +LHE C P + HRDFKS N+LL + A ++DFGLA + K G
Sbjct: 123 RGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDT 182
Query: 249 STRVLGTQGYVAPEYALTGHLT------TKSDVYSYGVVLLELLT 287
+V GT+ Y+APE L G + + D+Y+ G+VL EL++
Sbjct: 183 HGQV-GTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 79 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 134
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 135 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 188
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 133 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 186
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 80 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 135
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 136 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 189
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG--KQGEDEFKM-EVELLGRLRSPY 142
F + +G G FG V + G A+K++D+ K E E + E +L + P+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
L+ L D L +V +Y G + HL + ++ A + E
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTFE 155
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+LH S +I+RD K N+++D+ + +V+DFGLAK + G + + GT Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGR-TWXLCGTPEYLAP 207
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
E L+ D ++ GV++ E+ G P ++P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 37/202 (18%)
Query: 107 SNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANG 165
SN K++IK D+FK E++++ +++ Y L G ++ ++ ++Y+YM N
Sbjct: 76 SNNDKISIK-------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND 128
Query: 166 GL---QEHLYPANGSNSVASKLDWETRLRIALEAAKGL------EFLHEHCSPPVIHRDF 216
+ E+ + LD I ++ K + F + H + HRD
Sbjct: 129 SILKFDEYFFV----------LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 217 KSSNILLDKNFHAKVSDFGLAKIGSDK--AGGHVSTRVLGTQGYVAPEYAL--TGHLTTK 272
K SNIL+DKN K+SDFG ++ DK G GT ++ PE+ + + K
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSR------GTYEFMPPEFFSNESSYNGAK 232
Query: 273 SDVYSYGVVLLELLTGRVPIDV 294
D++S G+ L + VP +
Sbjct: 233 VDIWSLGICLYVMFYNVVPFSL 254
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + V+G G FG V + + + R AIK + ++ EV LL L Y++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 146 LLGYCSDRRKL--------------LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+RR + +Y NG L + ++ N + + ++ R
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ---RDEYWRLFR 123
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA----------KIGS 241
LEA L ++H S +IHRD K NI +D++ + K+ DFGLA K+ S
Sbjct: 124 QILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 242 DKAGGHVS--TRVLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELL 286
G T +GT YVA E TGH K D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 32/218 (14%)
Query: 93 VGHGGFGLVYRGVLSNGR-KVAIKLMDQA----GKQGED---------EFKMEVELLGRL 138
+G G +G V NG + AIK++ ++ G+ +D E E+ LL L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 139 RSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P ++ L D++ LV ++ G L E + + K D I +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-------KFDECDAANIMKQIL 156
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILL-DKN--FHAKVSDFGLAKIGSDKAGGHVSTRVLG 254
G+ +LH+H ++HRD K NILL +KN + K+ DFGL+ S + LG
Sbjct: 157 SGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLG 210
Query: 255 TQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
T Y+APE L K DV+S GV++ LL G P
Sbjct: 211 TAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRV 252
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEY 191
Query: 253 LGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 105 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 160
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 161 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 214
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG-----EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + A+ + + K ++F E + + P+++ L
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 82 IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF---- 137
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 138 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 191
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + + R A +
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARF-YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSN----GRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + VAIK ++F E + + P+++ L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 512
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ N K+ DFGL++ D S L + ++APE
Sbjct: 513 -----VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 566
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL + + R A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFXEPHARF-YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y+ G + HL ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRV 252
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEY 191
Query: 253 LGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 93 VGHGGFG--LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM--EVELLGRLRSPYLLALLG 148
+G G +G L+ R +++ + AIK++ + K+ EV +L L P ++ L
Sbjct: 45 LGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 149 YCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ D+R LV + G L + + N V + + I + G+ +LH+H
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV-------IIKQVLSGVTYLHKH- 155
Query: 208 SPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYA 264
++HRD K N+LL+ K+ K+ DFGL+ + ++ + R LGT Y+APE
Sbjct: 156 --NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK--KMKER-LGTAYYIAPE-V 209
Query: 265 LTGHLTTKSDVYSYGVVLLELLTGRVPI 292
L K DV+S GV+L LL G P
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRV 252
+ +GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEY 189
Query: 253 LGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ T+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 190 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E + N Q+ F ++ + TG F + +V H +G A+K++D+
Sbjct: 29 KWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHK----------ESGNHYAMKILDKQK 78
Query: 122 ----KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANG 176
KQ E E +L + P+L+ L D L +V +Y+A G + HL
Sbjct: 79 VVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR 137
Query: 177 SNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGL 236
+ ++ A + E+LH S +I+RD K N+L+D+ + +V+DFG
Sbjct: 138 FSEPHARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 237 AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNK 296
AK + G + + GT +APE L+ D ++ GV++ E+ G P ++
Sbjct: 188 AK----RVKGR-TWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242
Query: 297 P 297
P
Sbjct: 243 P 243
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 26/212 (12%)
Query: 92 VVGHGGFGLVYRGVLS----NGRKVAIKLMDQAG-KQGEDEFKM--EVELLGRLRSPYLL 144
V+G G FG V +L G++ A+K++ + KQ D+ + EV+LL +L P +
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L + D+ + + GG L+ S S++D RI + G+ + H
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGG---ELFDEIISRKRFSEVD---AARIIRQVLSGITYXH 143
Query: 205 EHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
++ ++HRD K N+LL+ K+ + ++ DFGL+ + +GT Y+AP
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIAP 197
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPID 293
E L G K DV+S GV+L LL+G P +
Sbjct: 198 E-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y G + HL + + R A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFXEPHARF-YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L L D L +V +Y G + HL + ++ A +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-TWXLCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAGKQG-EDEFKME 131
+KQ + +V+G G F V +L+ ++ VAIK + + +G E + E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+ +L +++ P ++AL L + + +GG L+ ++ D R
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERD---ASR 120
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNIL---LDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +++LH+ ++HRD K N+L LD++ +SDFGL+K+ + G V
Sbjct: 121 LIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ GT GYVAPE + D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 95/220 (43%), Gaps = 23/220 (10%)
Query: 82 SATGGFSKSNV-VGHGGFGLVYRGVLSNGR-KVA-IKLMDQAGKQGEDE-FKMEVELLGR 137
S G F K ++ +G G F VY+G+ + +VA +L D+ + E + FK E E L
Sbjct: 22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKG 81
Query: 138 LRSPYLLALLGYCSDRRK-----LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRI 192
L+ P ++ K +LV + +G L+ +L + W
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSW------ 134
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLD-KNFHAKVSDFGLAKIGSDKAGGHVSTR 251
+ KGL+FLH +PP+IHRD K NI + K+ D GLA + +
Sbjct: 135 CRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKA 189
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVP 291
V+GT + APE DVY++G LE T P
Sbjct: 190 VIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQA------GKQGEDEFKMEVELLGRLR 139
+ V+G G F +V R + G++ A+K++D A G ED K E + L+
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED-LKREASICHMLK 86
Query: 140 SPYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P+++ LL Y SD +V+++M L + + V S+ +R LEA
Sbjct: 87 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA-- 144
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLA-KIGSDK--AGGHVSTRV 252
L + H++ +IHRD K +LL + + K+ FG+A ++G AGG V
Sbjct: 145 -LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV---- 196
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT ++APE DV+ GV+L LL+G +P
Sbjct: 197 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L L D L +V +Y G + HL + ++ A +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-TWXLCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 65
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 117
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 176
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 177 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQA------GKQGEDEFKMEVELLGRLR 139
+ V+G G F +V R + G++ A+K++D A G ED K E + L+
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED-LKREASICHMLK 84
Query: 140 SPYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK 198
P+++ LL Y SD +V+++M L + + V S+ +R LEA
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA-- 142
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLA-KIGSDK--AGGHVSTRV 252
L + H++ +IHRD K +LL + + K+ FG+A ++G AGG V
Sbjct: 143 -LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV---- 194
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT ++APE DV+ GV+L LL+G +P
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 66
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 118
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 177
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 178 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH- 73
Query: 151 SDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 122
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 267 GHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 71
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 123
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 182
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 183 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+++H S +IHRD K SN+ ++++ ++ DFGLA+ ++ G+V+TR
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 258 YVAPEYALTG-HLTTKSDVYSYGVVLLELLTGR 289
Y APE L H D++S G ++ ELL G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAGKQG-EDEFKME 131
+KQ + +V+G G F V +L+ ++ VAIK + + +G E + E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+ +L +++ P ++AL L + + +GG L+ ++ D R
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERD---ASR 120
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNIL---LDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +++LH+ ++HRD K N+L LD++ +SDFGL+K+ + G V
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ GT GYVAPE + D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 104
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 105 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 156
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 215
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 216 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGT 255
+GL+++H S V+HRD K SN+LL+ K+ DFGLA++ +D H T + T
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVAT 192
Query: 256 QGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ Y APE L TKS D++S G +L E+L+ R
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 68
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 120
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 179
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 180 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 87 FSKSNVVGHGGFGLVY--RGVL--SNGRKVAIKLMDQA----GKQGEDEFKMEVELLGRL 138
F V+G GG+G V+ R V + G+ A+K++ +A + K E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 139 RSPYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
+ P+++ L+ + + + L+ +Y++ G L L +T E +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-------EREGIFMEDTACFYLAEIS 131
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L LH+ +I+RD K NI+L+ H K++DFGL K G V+ GT
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIE 186
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + D +S G ++ ++LTG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAGKQG-EDEFKME 131
+KQ + +V+G G F V +L+ ++ VAIK + + +G E + E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 132 VELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+ +L +++ P ++AL L + + +GG L+ ++ D R
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERD---ASR 120
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNIL---LDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +++LH+ ++HRD K N+L LD++ +SDFGL+K+ + G V
Sbjct: 121 LIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ GT GYVAPE + D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 12 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 72 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 120
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K +VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRK----VAIKLMDQAGKQG-EDEFKME 131
+KQ + +V+G G F V +L+ ++ VAIK + + +G E + E
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 132 VELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+ +L +++ P ++AL L + + +GG L+ ++ D R
Sbjct: 67 IAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGG---ELFDRIVEKGFYTERD---ASR 120
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNIL---LDKNFHAKVSDFGLAKIGSDKAGGHV 248
+ + +++LH+ ++HRD K N+L LD++ +SDFGL+K+ + G V
Sbjct: 121 LIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSV 174
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ GT GYVAPE + D +S GV+ LL G P
Sbjct: 175 LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 87 FSKSNVVGHGGFGLVY--RGVL--SNGRKVAIKLMDQA----GKQGEDEFKMEVELLGRL 138
F V+G GG+G V+ R V + G+ A+K++ +A + K E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 139 RSPYLLALL-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
+ P+++ L+ + + + L+ +Y++ G L L +T E +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-------EREGIFMEDTACFYLAEIS 131
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
L LH+ +I+RD K NI+L+ H K++DFGL K G V+ GT
Sbjct: 132 MALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIE 186
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + D +S G ++ ++LTG P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 102
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L L D L +V +Y G + HL + + R A +
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFXEPHARF-YAAQIVLTF 155
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + KV+DFG AK + G + + GT Y+A
Sbjct: 156 EYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGR-TWXLCGTPEYLA 207
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73
Query: 151 SDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 --RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 122
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 267 GHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 22/217 (10%)
Query: 87 FSKSNVVGHGGFGLVYR-GVLSNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRLRSP 141
F + +G G FG V + G A+K++D+ KQ E E +L + P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVNFP 101
Query: 142 YLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
+L+ L D L +V +Y G + HL + ++ A +
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-------YAAQIVLTF 154
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
E+LH S +I+RD K N+++D+ + +V+DFG AK + G + + GT Y+A
Sbjct: 155 EYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPEYLA 206
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
PE L+ D ++ GV++ E+ G P ++P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 151 SDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 121
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 267 GHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 151 SDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 121
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 267 GHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLLALLGYCS 151
+G G FG V+RG G +VA+K+ + ++ F+ E+ LR +L + +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIF--SSREERSWFREAEIYQTVMLRHENILGFIA--A 91
Query: 152 DRRK-------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
D + LV DY +G L ++L N + E +++AL A GL LH
Sbjct: 92 DNKDNGTWTQLWLVSDYHEHGSLFDYL------NRYTVTV--EGMIKLALSTASGLAHLH 143
Query: 205 EHC-----SPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS---TRVLGTQ 256
P + HRD KS NIL+ KN ++D GLA + D A + +GT+
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 202
Query: 257 GYVAPEYALTGHLTTK-------SDVYSYGVVLLEL 285
Y+APE L + K +D+Y+ G+V E+
Sbjct: 203 RYMAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 48/232 (20%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + ++G GGFG V++ +G+ I+ + ++ E EV+ L +L ++
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIVH 69
Query: 146 LLGYCSDRRKLLVYDY---MANGGLQEHLY-PANGSNSVASKL----------------D 185
G C D +DY ++ L+ Y P N NS SK
Sbjct: 70 YNG-CWDG-----FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQ 123
Query: 186 WETRLR-------IALE----AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDF 234
W + R +ALE KG++++H S +IHRD K SNI L K+ DF
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 235 GLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
GL + S K G TR GT Y++PE + + D+Y+ G++L ELL
Sbjct: 181 GL--VTSLKNDGK-RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+++H S +IHRD K SN+ ++++ ++ DFGLA+ ++ G+V+TR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 258 YVAPEYALTG-HLTTKSDVYSYGVVLLELLTGR 289
Y APE L H D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 22 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 75
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y+ G + HL +
Sbjct: 76 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 134
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG AK
Sbjct: 135 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 182
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 183 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 83
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y+ G + HL +
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG AK
Sbjct: 143 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 191 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 83
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y G + HL +
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP 142
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+++D+ + KV+DFG AK
Sbjct: 143 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-- 190
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 191 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 83
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y+ G + HL +
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG AK
Sbjct: 143 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 191 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
+GL+++H S +IHRD K SN+ ++++ ++ DFGLA+ ++ G+V+TR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 258 YVAPEYALTG-HLTTKSDVYSYGVVLLELLTGR 289
Y APE L H D++S G ++ ELL G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGVL----SNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRL 138
F + +G G FG R +L G A+K++D+ KQ E E +L +
Sbjct: 43 FERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAV 98
Query: 139 RSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIV 151
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPE 203
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 30 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 83
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y+ G + HL +
Sbjct: 84 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 142
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG AK
Sbjct: 143 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 190
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 191 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGVL----SNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRL 138
F + +G G FG R +L G A+K++D+ KQ E E +L +
Sbjct: 43 FERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAV 98
Query: 139 RSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIV 151
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPE 203
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGVL----SNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRL 138
F + +G G FG R +L G A+K++D+ KQ E E +L +
Sbjct: 43 FERIKTLGTGSFG---RVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAV 98
Query: 139 RSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P+L+ L D L +V +Y+ G + HL + ++ A +
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-------YAAQIV 151
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT
Sbjct: 152 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPE 203
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 50 KWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKL----- 103
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
KQ E E +L + P+L+ L D L +V +Y+ G + HL +
Sbjct: 104 KQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP 162
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + +V+DFG AK
Sbjct: 163 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-- 210
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 211 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 94
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL-------YPANGSNSVASKLDWETRLRI 192
++ LLG C+ +++ ++ G L +L P + L E +
Sbjct: 95 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTR 251
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 211 RLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 72
Query: 151 SDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 --RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH-- 121
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 -GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 267 GHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 144
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H + T+ Y AP
Sbjct: 145 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 200
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
++ + +G G +G+V + N +VAIK + Q + + E+++L R R ++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 145 ALLGYCSDRRKLLVYD-YMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
+ + D Y+ ++ LY + +++ + + +GL+++
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN----DHICYFLYQILRGLKYI 145
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--TRVLGTQGYVAP 261
H S V+HRD K SN+LL+ K+ DFGLA++ +D H + T+ Y AP
Sbjct: 146 H---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWYRAP 201
Query: 262 EYALTGHLTTKS-DVYSYGVVLLELLTGR 289
E L TKS D++S G +L E+L+ R
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 74 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 122
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 84 TGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRL-RSP 141
G F K VV FGL G KVA+K++ E E M E++++ L +
Sbjct: 41 AGAFGK--VVEATAFGL---GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 95
Query: 142 YLLALLGYCSDRRKLLVY-DYMANGGL--------QEHLYPANGSNSVASKLDWET---- 188
++ LLG C+ +LV +Y G L + L P+ LD E
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 189 ----RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKA 244
L + + A+G+ FL S IHRD + N+LL AK+ DFGLA+ + +
Sbjct: 156 ELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 245 GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
V ++APE T +SDV+SYG++L E+ +
Sbjct: 213 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 92 VVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPYLLALL 147
+G G +G + S+G+ + K +D G E E +M EV LL L+ P ++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 148 GYCSDRRKLLVY---DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
DR +Y +Y G L + LD E LR+ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECH 128
Query: 205 EHCS--PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
V+HRD K +N+ LD + K+ DFGLA+I + + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKTFVGTPYYMSPE 186
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
KSD++S G +L EL P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGVL----SNGRKVAIKLMDQAG----KQGEDEFKMEVELLGRL 138
F + +G G FG R +L G A+K++D+ KQ E E +L +
Sbjct: 36 FERIKTLGTGSFG---RVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAV 91
Query: 139 RSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
P+L+ L D L +V +Y+ G + HL ++ A +
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-------YAAQIV 144
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
E+LH S +I+RD K N+L+D+ + +V+DFG AK + G + + GT
Sbjct: 145 LTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGR-TWXLCGTPE 196
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G +G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 131 EVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
EV +L +L P ++ L + D+R LV + G L + + + V + +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----- 108
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGG 246
I + G +LH+H ++HRD K N+LL+ ++ K+ DFGL+ + GG
Sbjct: 109 --IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGG 161
Query: 247 HVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ R LGT Y+APE L K DV+S GV+L LL G P
Sbjct: 162 KMKER-LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 131 EVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETR 189
EV +L +L P ++ L + D+R LV + G L + + + V + +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV----- 125
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGG 246
I + G +LH+H ++HRD K N+LL+ ++ K+ DFGL+ + GG
Sbjct: 126 --IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGG 178
Query: 247 HVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ R LGT Y+APE L K DV+S GV+L LL G P
Sbjct: 179 KMKER-LGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 92 VVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPYLLALL 147
+G G +G + S+G+ + K +D G E E +M EV LL L+ P ++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 148 GYCSDRRKLLVY---DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
DR +Y +Y G L + LD E LR+ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECH 128
Query: 205 EHCS--PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
V+HRD K +N+ LD + K+ DFGLA+I + + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS--FAKAFVGTPYYMSPE 186
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
KSD++S G +L EL P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 22/235 (9%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG-YC 150
+G G G+V + G++VA+K MD +Q + EV ++ ++ + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
+V +++ G L + + ++++ E + L + L +LH
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--------THTRMNEEQIATVCLSVLRALSYLHNQG--- 161
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYALTGH 268
VIHRD KS +ILL + K+SDFG + V R ++GT ++APE
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCA----QVSKEVPKRKXLVGTPYWMAPEVISRLP 217
Query: 269 LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGV--LVSWALPRLTDREKILEIM 321
T+ D++S G++++E++ G P N+P + + + PR+ D K+ ++
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPY-FNEPPLQAMRRIRDSLPPRVKDLHKVSSVL 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 92 VVGHGGFGLVYR-GVLSNGRKVAIKLMDQAGKQGEDEFKM---EVELLGRLRSPYLLALL 147
+G G +G + S+G+ + K +D G E E +M EV LL L+ P ++
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 148 GYCSDRRKLLVY---DYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
DR +Y +Y G L + LD E LR+ + L+ H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY---LDEEFVLRVMTQLTLALKECH 128
Query: 205 EHCS--PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
V+HRD K +N+ LD + K+ DFGLA+I + + +GT Y++PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPE 186
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
KSD++S G +L EL P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 17/208 (8%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYC 150
+G G G+V + GR+VA+K+MD +Q + EV ++ + ++ + Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
++ +++ G L + + +L+ E + + L +LH
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQV--------RLNEEQIATVCEAVLQALAYLHAQG--- 161
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGL-AKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHL 269
VIHRD KS +ILL + K+SDFG A+I D ++GT ++APE
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK---RKXLVGTPYWMAPEVISRSLY 218
Query: 270 TTKSDVYSYGVVLLELLTGRVPIDVNKP 297
T+ D++S G++++E++ G P + P
Sbjct: 219 ATEVDIWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSN----GRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + VAIK ++F E + + P+++ L
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 132
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ K+ DFGL++ D S L + ++APE
Sbjct: 133 -----VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 186
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 92
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 93 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 209 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 26/175 (14%)
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+IA+ K LE LH S VIHRD K SN+L++ K DFG++ D +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 251 RVLGTQGYVAPEYALTGHL-----TTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
G + Y APE + L + KSD++S G+ +EL R P D S
Sbjct: 198 ---GCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYD-----------S 242
Query: 306 WALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQ 360
W P ++++E P L E + + C++ + RP ++ Q
Sbjct: 243 WGTP-FQQLKQVVEEPSPQLPADKFSAEFVD---FTSQCLKKNSKERPTYPELXQ 293
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
V+G G +G+VY G LSN ++AIK + + + E+ L L+ ++ LG
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
S+ + ++ GG L + K + +T + +GL++LH++
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 211 VIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVL-GTQGYVAPEYALTGH 268
++HRD K N+L++ K+SDFG +K AG + T GT Y+APE G
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 269 --LTTKSDVYSYGVVLLELLTGRVPI 292
+D++S G ++E+ TG+ P
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 102/237 (43%), Gaps = 24/237 (10%)
Query: 63 KLEVTTDNGLQVFTFKQLHS-ATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAG 121
K E N + F+++ + TG F + +V H G Y + + +KV +KL
Sbjct: 30 KWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEH 88
Query: 122 KQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSV 180
E + V P+L+ L D L +V +Y G + HL +
Sbjct: 89 TLNEKRIQQAVNF------PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP 142
Query: 181 ASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIG 240
++ A + E+LH S +I+RD K N+L+D+ + KV+DFG AK
Sbjct: 143 HARF-------YAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-- 190
Query: 241 SDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKP 297
+ G + + GT Y+APE L+ D ++ GV++ E+ G P ++P
Sbjct: 191 --RVKGR-TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Query: 213 HRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTK 272
HRD K NIL+ + A + DFG+A +D+ + V GT Y APE H T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 273 SDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPR 310
+D+Y+ VL E LTG P ++ S G ++ A+PR
Sbjct: 216 ADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPR 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSDKAGGHVSTRVLGT 255
+GL+++H S VIHRD K SN+L+++N K+ DFG+A+ S + T + T
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 256 QGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ Y APE L+ H T++ D++S G + E+L R
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 89 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 198
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 83
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 84 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 200 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 100 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 209
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 93 VGHGGFGLVYRGVL-SNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRS---PYLLALLG 148
+G G G V++ G +A+K M ++G + E++ ++ ++L L+S PY++ G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKSHDCPYIVQCFG 91
Query: 149 -YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
+ ++ + + M G E L + + ++ + K L +L E
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKL-----KKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
VIHRD K SNILLD+ K+ DFG++ ++ DKA R G Y+APE
Sbjct: 145 G--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA----KDRSAGCAAYMAPERIDP 198
Query: 267 GHLT-----TKSDVYSYGVVLLELLTGRVP 291
T ++DV+S G+ L+EL TG+ P
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 93 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 202
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 115/260 (44%), Gaps = 54/260 (20%)
Query: 92 VVGHGGFGLVYRGVLSNGRK-VAIKLMDQAGKQGEDEFKM--EVELLGRLRSPYLLALLG 148
++G G +G VY N K VAIK +++ + D ++ E+ +L RL+S Y++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL-- 90
Query: 149 YCSDRRKLLVYDYMANGGLQ--EHLYPA-NGSNSVASKLDWETRLRIALEAAK------- 198
YD + L + LY ++S KL ++T + + E K
Sbjct: 91 ----------YDLIIPDDLLKFDELYIVLEIADSDLKKL-FKTPIFLTEEHIKTILYNLL 139
Query: 199 -GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS------- 249
G F+HE +IHRD K +N LL+++ KV DFGLA+ I S+K V+
Sbjct: 140 LGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 250 ------------TRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNK 296
T + T+ Y APE L TKS D++S G + ELL + +N
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL-NMLQSHIND 255
Query: 297 PSGEGVLV--SWALPRLTDR 314
P+ L S P DR
Sbjct: 256 PTNRFPLFPGSSCFPLSPDR 275
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 92 VVGHGGFGLVYRGVLSN----GRKVAIKLMDQAGKQG-EDEFKMEVELLGRLRSPYLLAL 146
+G G FG V++G+ + VAIK ++F E + + P+++ L
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+G ++ ++ + G L+ L S +AS + + +L AL + F
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF---- 512
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
+HRD + N+L+ K+ DFGL++ D S L + ++APE
Sbjct: 513 -----VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK-WMAPESINF 566
Query: 267 GHLTTKSDVYSYGVVLLELL 286
T+ SDV+ +GV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK--IGSDKAGGHVSTRVLGT 255
+GL+++H S VIHRD K SN+L+++N K+ DFG+A+ S + T + T
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 256 QGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+ Y APE L+ H T++ D++S G + E+L R
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 82 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 191
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-----KVAIKLMDQAGKQGEDEFKMEVELLGRLRSP 141
+ + +G GGF Y + + KV K M Q E + E+ + L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHKSLDNP 102
Query: 142 YLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++ G+ D + V + + L + ++ + +R + +G++
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMR---QTIQGVQ 156
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
+LH + VIHRD K N+ L+ + K+ DFGLA KI D G + GT Y+A
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKXLCGTPNYIA 210
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
PE + + D++S G +L LL G+ P + +
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 94 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 203
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 204 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-----KVAIKLMDQAGKQGEDEFKMEVELLGRLRSP 141
+ + +G GGF Y + + KV K M Q E + E+ + L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHKSLDNP 102
Query: 142 YLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++ G+ D + V + + L + ++ + +R + +G++
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMR---QTIQGVQ 156
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
+LH + VIHRD K N+ L+ + K+ DFGLA KI D G + GT Y+A
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKTLCGTPNYIA 210
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
PE + + D++S G +L LL G+ P + +
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 83
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 84 -VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 200 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + V+G G FG V + + + R AIK + ++ EV LL L Y++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVVR 66
Query: 146 LLGYCSDRRKL--------------LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLR 191
+RR + +Y N L + ++ N + + ++ R
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ---RDEYWRLFR 123
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA----------KIGS 241
LEA L ++H S +IHRD K NI +D++ + K+ DFGLA K+ S
Sbjct: 124 QILEA---LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 242 DKAGGHVS--TRVLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELL 286
G T +GT YVA E TGH K D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 176
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 93 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 202
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 85 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 194
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMD-QAGKQGEDEFKMEVELLGRLRSPYLLALLGY 149
+G G G V V VA+K++D + + K E+ + L ++ G+
Sbjct: 13 TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 150 CSDRR----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
RR + L +Y + G L + + P G ++ R + G+ +LH
Sbjct: 73 ---RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ-------RFFHQLMAGVVYLH- 121
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
+ HRD K N+LLD+ + K+SDFGLA + + ++ GT YVAPE
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPID 293
+ DV+S G+VL +L G +P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-----KVAIKLMDQAGKQGEDEFKMEVELLGRLRSP 141
+ + +G GGF Y + + KV K M Q E + E+ + L +P
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHKSLDNP 86
Query: 142 YLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++ G+ D + V + + L + ++ + +R + +G++
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMR---QTIQGVQ 140
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
+LH + VIHRD K N+ L+ + K+ DFGLA KI D G + GT Y+A
Sbjct: 141 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKDLCGTPNYIA 194
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
PE + + D++S G +L LL G+ P + +
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLS 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 14/206 (6%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
V+G G +G+VY G LSN ++AIK + + + E+ L L+ ++ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPP 210
S+ + ++ GG L S K + +T + +GL++LH++
Sbjct: 75 SENGFIKIFMEQVPGGSLSALL---RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 211 VIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVL-GTQGYVAPEYALTGH 268
++HRD K N+L++ K+SDFG +K AG + T GT Y+APE G
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 269 --LTTKSDVYSYGVVLLELLTGRVPI 292
+D++S G ++E+ TG+ P
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 92
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 93 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 209 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 26/222 (11%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSP--- 141
F +G GGFG+V+ + AIK + ++ E M EV+ L +L P
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 142 -YLLALLGYCSDRR------KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL 194
Y A L + + K+ +Y M + NG ++ + + L I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER-ERSVCLHIFL 125
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRV- 252
+ A+ +EFLH S ++HRD K SNI + KV DFGL + D+ V T +
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 253 --------LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
+GT+ Y++PE + K D++S G++L ELL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 171
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-----KVAIKLMDQAGKQGEDEFKMEVELLGRLRSP 141
+ + +G GGF Y + + KV K M Q E + E+ + L +P
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-KMSTEIAIHKSLDNP 102
Query: 142 YLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
+++ G+ D + V + + L + ++ + +R + +G++
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICR---RRSLLELHKRRKAVTEPEARYFMR---QTIQGVQ 156
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
+LH + VIHRD K N+ L+ + K+ DFGLA KI D G + GT Y+A
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD---GERKKDLCGTPNYIA 210
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
PE + + D++S G +L LL G+ P + +
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 171
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 115 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 224
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 115 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 224
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 173
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 124
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 179
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 22/221 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR----KVAIKLM--DQAGKQGEDEFKMEVELLGRLRS 140
F+ ++G G FG V L KVA+K++ D +EF E +
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 141 PYLLALLGYCSDRRK-------LLVYDYMANGGLQEHLYPAN-GSNSVASKLDWETRLRI 192
P++ L+G R +++ +M +G L L + G N L +T +R
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF--NLPLQTLVRF 142
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTR 251
++ A G+E+L S IHRD + N +L ++ V+DFGL+ KI S
Sbjct: 143 MVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT-GRVP 291
L + ++A E T SDV+++GV + E++T G+ P
Sbjct: 200 KLPVK-WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 117 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 226
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 124
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 179
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV+++++ L++ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD-LKDFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 86 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 195
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 109 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 218
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKDFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 27/242 (11%)
Query: 55 REEKGESGKLEVTTDNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAI 114
RE S + ++ ++F FK+ TG FS+ +V + G+ A+
Sbjct: 4 RENGESSSSWKKQAEDIKKIFEFKET-LGTGAFSE----------VVLAEEKATGKLFAV 52
Query: 115 KLMDQAGKQG-EDEFKMEVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYP 173
K + + +G E + E+ +L +++ ++AL L + + +GG L+
Sbjct: 53 KCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGG---ELFD 109
Query: 174 ANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAK 230
++ D T +R L+A + +LH ++HRD K N+L D+
Sbjct: 110 RIVEKGFYTEKDASTLIRQVLDA---VYYLHRM---GIVHRDLKPENLLYYSQDEESKIM 163
Query: 231 VSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRV 290
+SDFGL+K+ + G V + GT GYVAPE + D +S GV+ LL G
Sbjct: 164 ISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 220
Query: 291 PI 292
P
Sbjct: 221 PF 222
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV+++++ L++ + S + + + +GL
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMD-LKDFM-----DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 119 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 228
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 171
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 92
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 93 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 209 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 116/294 (39%), Gaps = 43/294 (14%)
Query: 92 VVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE---FKMEVELLGRLRSPYLLALLG 148
++G G FG VY G +VAI+L+D + ED+ FK EV + R ++ +G
Sbjct: 40 LIGKGRFGQVYHGRWHG--EVAIRLID-IERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
C L + + G LY + LD +IA E KG+ +LH +
Sbjct: 97 ACMSPPHLAIITSLCKG---RTLYSVVRDAKIV--LDVNKTRQIAQEIVKGMGYLH---A 148
Query: 209 PPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGY---VAPEYAL 265
++H+D KS N+ D N ++DFGL I G ++ G+ +APE
Sbjct: 149 KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR 207
Query: 266 TGHLTTK---------SDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVSWALPRLTDREK 316
T+ SDV++ G + EL P + W +
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA----IIWQMG------- 256
Query: 317 ILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKYNR 370
M P L Q M + +++ I C E + RP ++ L L K NR
Sbjct: 257 --TGMKPNL-SQIGMGK--EISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 174
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV+++++ L++ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD-LKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 176
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 187 ETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGG 246
E + + + A+G+EFL S IHRD + NILL +N K+ DFGLA+ D
Sbjct: 199 EDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLAR---DIYKN 252
Query: 247 HVSTRVLGTQ---GYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
R T+ ++APE +TKSDV+SYGV+L E+ +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 129
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 130 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 189 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 246 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV+++++ L++ + S + + + +GL
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMD-LKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 173
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L +A K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L D+ K E + +++ +R Y
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 160 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 269
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLR-SPYLLALL 147
S ++G G + V V L NG++ A+K++++ EVE L + + + +L L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 148 GYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+ D R LV++ + G + H+ N + R+ + A L+FLH
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREAS-------RVVRDVAAALDFLH-- 128
Query: 207 CSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAK-IGSDKAGGHVSTRVL----GTQGY 258
+ + HRD K NIL +K K+ DF L + + + ++T L G+ Y
Sbjct: 129 -TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 259 VAPEY--ALTGHLT---TKSDVYSYGVVLLELLTGRVPI 292
+APE T T + D++S GVVL +L+G P
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L +A K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + E +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSYICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 93 VGHGGFGLVYRGVLS-NGRKVAIKLM---DQAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
VG G +G V V G KVAIK + Q+ + ++ E+ LL +R ++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGLLD 91
Query: 149 YCSDRRKL-------LVYDYMAN--GGLQEHLYPANGSNSVASKLDWETRLRIALEAAKG 199
+ L LV +M G L +H KL + + + KG
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-----------EKLGEDRIQFLVYQMLKG 140
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYV 259
L ++H + +IHRD K N+ ++++ K+ DFGLA+ + G V TR Y
Sbjct: 141 LRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYR 192
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGRV 290
APE L T++ D++S G ++ E++TG+
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 88 SKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLAL 146
SK+ ++G G FG V++ + G K+A K++ G + ++E K E+ ++ +L L+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 147 L-GYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
+ S +LV +Y+ G L + + + + ++LD + + +G+ +H+
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYN---LTELD---TILFMKQICEGIRHMHQ 205
Query: 206 HCSPPVIHRDFKSSNIL-LDKNF-HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
++H D K NIL ++++ K+ DFGLA+ + V+ GT ++APE
Sbjct: 206 MY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEV 259
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
++ +D++S GV+ LL+G P
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 83
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 84 -VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 200 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 83
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 84 -VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 143 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 200 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 30/218 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 94
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL---------YPANGSNSVASKLDWETRL 190
++ LLG C+ +++ ++ G L +L Y + L E +
Sbjct: 95 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVS 249
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 154 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 211 DARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L+ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--------TRVLGTQGYVAPE 262
VIHRD K SN+L++ N KV DFGLA+I + A + T + T+ Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 263 YALTGHLTTKS-DVYSYGVVLLELLTGR 289
LT +++ DV+S G +L EL R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL------E 195
++ LL KL LV+ EH++ + AS L T + + L +
Sbjct: 63 IVKLLDVIHTENKLYLVF---------EHVHQDLKTFMDASAL---TGIPLPLIKSYLFQ 110
Query: 196 AAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGT 255
+GL F H H V+HRD K N+L++ K++DFGLA+ + T + T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVT 165
Query: 256 QGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
Y APE L + +T D++S G + E++T R
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 9/88 (10%)
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS--------TRVLGTQGYVAPE 262
VIHRD K SN+L++ N KV DFGLA+I + A + T + T+ Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 263 YALTGHLTTKS-DVYSYGVVLLELLTGR 289
LT +++ DV+S G +L EL R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
F K +G G +G+VY+ G VA+K +D + E+ LL L P
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 67 IVKLLDVIHTENKLYLVFEHV-DQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + V T Y AP
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAP 175
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 93
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHL-------YPANGSNSVASK-LDWETRLR 191
++ LLG C+ +++ ++ G L +L P + L E +
Sbjct: 94 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVST 250
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 210 ARLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVY--RGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
F K +G G +G+VY R L+ K+ +G + E+ LL L P
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 172
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 86 GFSKSNVVGHGGFGLVY--RGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY 142
F K +G G +G+VY R L+ K+ +G + E+ LL L P
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 143 LLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
++ LL KL LV++++ + L++ + S + + + +GL
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-----DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
F H H V+HRD K N+L++ K++DFGLA+ + T + T Y AP
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAP 171
Query: 262 EYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
E L + +T D++S G + E++T R
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQGEDE-FKMEVEL 134
QLH F V+G G FG V + N ++ A+K++++ K+ E F+ E ++
Sbjct: 70 QLHRE--DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 135 LGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L ++ AL D L LV DY G L L + + +A
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA 187
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVL 253
+++ L + +HRD K N+LLD N H +++DFG + + + G S+ +
Sbjct: 188 IDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAV 237
Query: 254 GTQGYVAPEYALT-----GHLTTKSDVYSYGVVLLELLTGRVPI 292
GT Y++PE G + D +S GV + E+L G P
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)
Query: 76 TFKQLHSATGGFSKSNVVGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEF 128
TFKQ + +G G F +V + S G + A K + +A ++G +E
Sbjct: 4 TFKQ-QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 129 KMEVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWET 188
+ EV +L ++ P ++ L +R +++ + +GG L+ S+ + +
Sbjct: 63 EREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATS 119
Query: 189 RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKA 244
++ L+ G+ +LH + + H D K NI LLDKN H K+ DFGLA D
Sbjct: 120 FIKQILD---GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED-- 171
Query: 245 GGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
G + GT +VAPE L ++D++S GV+ LL+G P
Sbjct: 172 -GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 92
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHLYPANGS-----NSVASKLDWETRLRIAL 194
++ LLG C+ +++ ++ G L +L + L E + +
Sbjct: 93 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVL 253
+ AKG+EFL S IHRD + NILL + K+ DFGLA+ I D L
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ ++APE T +SDV+S+GV+L E+ +
Sbjct: 209 PLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 133 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPN 186
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 22/224 (9%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKV-AIKLMDQAG--KQGEDE-FKMEVEL 134
QLH F V+G G FG V + N ++ A+K++++ K+ E F+ E ++
Sbjct: 86 QLHRE--DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 135 LGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIA 193
L ++ AL D L LV DY G L L + KL +
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL------SKFEDKLPEDMARFYI 197
Query: 194 LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVL 253
E ++ +H+ +HRD K N+LLD N H +++DFG + + + G S+ +
Sbjct: 198 GEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAV 253
Query: 254 GTQGYVAPEYALT-----GHLTTKSDVYSYGVVLLELLTGRVPI 292
GT Y++PE G + D +S GV + E+L G P
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPN 182
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 23/213 (10%)
Query: 90 SNVVGHGGFGLVYRGVL-SNGRKVAIKLMDQAGKQGED---EFKMEVELLGRLRS-PYLL 144
S +G G F +V + + S G++ A K + + ++G+D E E+ +L +S P ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKR-RRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 145 ALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
L Y + +L+ +Y A G + P +A + +R+ + +G+ +L
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFSLCLP-----ELAEMVSENDVIRLIKQILEGVYYL 147
Query: 204 HEHCSPPVIHRDFKSSNILLDKNF---HAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYV 259
H++ ++H D K NILL + K+ DFG+++ K G R ++GT Y+
Sbjct: 148 HQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYL 200
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE +TT +D+++ G++ LLT P
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 97/229 (42%), Gaps = 40/229 (17%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + V+G G FG V + + + R AIK + ++ EV LL L Y++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVXLLASLNHQYVVR 66
Query: 146 LLGYCSDRRKL--------------LVYDYMANGGLQEHLYPANGSNSVASKLDWETRL- 190
+RR + +Y N L + ++ N + + D RL
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSEN----LNQQRDEYWRLF 122
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA----------KIG 240
R LEA L ++H S +IHR+ K NI +D++ + K+ DFGLA K+
Sbjct: 123 RQILEA---LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLD 176
Query: 241 SDKAGGHVS--TRVLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELL 286
S G T +GT YVA E TGH K D YS G++ E +
Sbjct: 177 SQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S GV++ E++ G V
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 129 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKTLCGTPN 182
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S GV++ E++ G V
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKGGV 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 93 VGHGGFGLVYRG------VLSNGRKVAIKLMDQAGKQGE-----DEFKMEVELLGRLRSP 141
+G G FG V + R VA+K++ + E E K+ + + L
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN-- 92
Query: 142 YLLALLGYCSDR--RKLLVYDYMANGGLQEHLYPANGS-----NSVASKLDWETRLRIAL 194
++ LLG C+ +++ ++ G L +L + L E + +
Sbjct: 93 -VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTRVL 253
+ AKG+EFL S IHRD + NILL + K+ DFGLA+ I D L
Sbjct: 152 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
+ ++APE T +SDV+S+GV+L E+ +
Sbjct: 209 PLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 35/219 (15%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + ++G GGFG V++ +G+ IK + ++ E EV+ L +L ++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIVH 68
Query: 146 LLGYCSD--------------RRK----LLVYDYMANGGLQEHLYPANGSNSVASKLDWE 187
G C D R K + ++ G L++ + G KLD
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-----KLDKV 122
Query: 188 TRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGH 247
L + + KG++++H S +I+RD K SNI L K+ DFGL + S K G
Sbjct: 123 LALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGK 177
Query: 248 VSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
R GT Y++PE + + D+Y+ G++L ELL
Sbjct: 178 -RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAI-KLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYC 150
+G G FG VY+ +A K++D ++ +++ +E+++L P ++ LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLHEH 206
+ ++ ++ A G + ++V +L+ E+++++ + L +LH++
Sbjct: 105 YENNLWILIEFCAGGAV----------DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYA 264
+IHRD K+ NIL + K++DFG+ S K + R +GT ++APE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDSFIGTPYWMAPEVV 207
Query: 265 LTGH-----LTTKSDVYSYGVVLLEL 285
+ K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAI-KLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYC 150
+G G FG VY+ +A K++D ++ +++ +E+++L P ++ LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLHEH 206
+ ++ ++ A G + ++V +L+ E+++++ + L +LH++
Sbjct: 105 YENNLWILIEFCAGGAV----------DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYA 264
+IHRD K+ NIL + K++DFG+ S K + R +GT ++APE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRTIQRRDSFIGTPYWMAPEVV 207
Query: 265 LTGH-----LTTKSDVYSYGVVLLEL 285
+ K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 151 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPN 204
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAI-KLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYC 150
+G G FG VY+ +A K++D ++ +++ +E+++L P ++ LL +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 151 SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLHEH 206
+ ++ ++ A G + ++V +L+ E+++++ + L +LH++
Sbjct: 105 YENNLWILIEFCAGGAV----------DAVMLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR--VLGTQGYVAPEYA 264
+IHRD K+ NIL + K++DFG+ S K + R +GT ++APE
Sbjct: 155 ---KIIHRDLKAGNILFTLDGDIKLADFGV----SAKNTRXIQRRDXFIGTPYWMAPEVV 207
Query: 265 LTGH-----LTTKSDVYSYGVVLLEL 285
+ K+DV+S G+ L+E+
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 153 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPN 206
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 199 GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA-KIGSDKAGGHVSTRVLGTQG 257
G ++LH + VIHRD K N+ L+++ K+ DFGLA K+ D G + GT
Sbjct: 127 GCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPN 180
Query: 258 YVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVN 295
Y+APE + + DV+S G ++ LL G+ P + +
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 86 GFSKSNVVGHGGFG-LVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLL 144
F +V+GHG G +VYRG+ N R VA+K + D EV+LL R +
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFADR---EVQLL-RESDEHPN 79
Query: 145 ALLGYCS--DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEF 202
+ +C+ DR+ + + LQE++ + ++ L E + + + GL
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAH-----LGLEP-ITLLQQTTSGLAH 133
Query: 203 LHEHCSPPVIHRDFKSSNILLD-KNFHAK----VSDFGLAKIGSDKAGGHVSTR---VLG 254
LH S ++HRD K NIL+ N H K +SDFGL K + G H +R V G
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA--VGRHSFSRRSGVPG 188
Query: 255 TQGYVAPEYA---LTGHLTTKSDVYSYGVVLLELLT 287
T+G++APE + T D++S G V +++
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 211 VIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAG------GHVSTRV--LGTQGYVAPE 262
VIHRD K SN+L++ N KV DFGLA+I + A G S V + T+ Y APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 263 YALTGHLTTKS-DVYSYGVVLLELLTGR 289
LT +++ DV+S G +L EL R
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSN-GRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPY 142
++ + V+G+G FG+VY+ L + G VAIK L +A K E + +++ +R Y
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL-EAAKGLE 201
Y S +K VY + + +Y S A + +++ + + + L
Sbjct: 81 FF----YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
++H + HRD K N+LLD + K+ DFG AK G + + ++ Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK---QLVRGEPNVSXICSRYYRA 190
Query: 261 PEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
PE T+ DV+S G VL ELL G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 119
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 120 ---LEAVR-------HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 165
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 225
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 226 RVSXECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 122
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 123 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 168
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 169 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 228
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 229 RVSSECQHLIRWCLALRPSDRPTFEEIQN 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 124
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 125 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 170
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 230
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFK-MEVELLGRLRSPYLL 144
++ V+G+G FG+V++ L +VAIK + Q + FK E++++ ++ P ++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVV 95
Query: 145 AL--LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL---EAAKG 199
L Y + +K V+ + + E +Y A S A L I L + +
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA--SRHYAKLKQTMPMLLIKLYMYQLLRS 153
Query: 200 LEFLHEHCSPPVIHRDFKSSNILLDKNFHA-KVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
L ++H S + HRD K N+LLD K+ DFG AKI G + + ++ Y
Sbjct: 154 LAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI---LIAGEPNVSXICSRYY 207
Query: 259 VAPEYAL-TGHLTTKSDVYSYGVVLLELLTGR 289
APE + TT D++S G V+ EL+ G+
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 123
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 124 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 169
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 229
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V + VL G VA+K + Q + ++ E+ LL + +++L
Sbjct: 30 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISL 86
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 87 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 141
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ S + T + T+ Y APE L
Sbjct: 142 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS---TNFMMTPYVVTRYYRAPEVILG 197
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ EL+ G V
Sbjct: 198 MGYKENVDIWSVGCIMGELVKGSV 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 123
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 124 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 169
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 229
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 230 RVSSECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 124
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 125 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 170
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 230
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 139
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 140 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 185
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 245
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 246 RVSSECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 138
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 139 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 184
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 244
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 245 RVSSECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 119
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 120 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 165
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 225
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 226 RVSSECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 124
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 125 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 170
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 230
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 231 RVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY- 142
G F K VV +GL+ VA+K++ + E E M E+++L L +
Sbjct: 50 GAFGK--VVEATAYGLIKSDA---AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 143 LLALLGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD------------WETR 189
++ LLG C+ L++ +Y G L L S + SK E
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-FICSKTSPAIMEDDELALDLEDL 163
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
L + + AKG+ FL S IHRD + NILL K+ DFGLA+ + + V
Sbjct: 164 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG+ L EL +
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 139
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 140 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 185
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 245
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 246 RVSXECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 138
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 139 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 184
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 244
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 245 RVSXECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 99/246 (40%), Gaps = 49/246 (19%)
Query: 93 VGHGGFGLVYRGVLSNGRKV-AIKLMD-----QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G +G+V + + R + AIK+M+ Q + + K EV L+ +L P + L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 147 LGYCSDRRKLLVYDYMANGG---------------------LQEHLYPANGSNSVA---- 181
D + + + + +GG ++ + P N A
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 182 -----SKLDWETRLR----IALEAAKGLEFLHEHCSPPVIHRDFKSSNILL--DKNFHAK 230
LD+ R + I + L +LH + HRD K N L +K+F K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 231 VSDFGLAKIGSDKAGGHV--STRVLGTQGYVAPEYALTGHLT--TKSDVYSYGVVLLELL 286
+ DFGL+K G T GT +VAPE T + + K D +S GV+L LL
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 287 TGRVPI 292
G VP
Sbjct: 271 MGAVPF 276
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 151
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 152 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 197
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 257
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 258 RVSSECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 166
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 167 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 212
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 272
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 273 RVSSECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 119
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 120 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 165
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G + A K+++ D K+E E + +L+ P ++ L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 150 CSDRR-KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
+ LV+D + G L E + + S+ D ++ LE+ + + H S
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILES---IAYCH---S 146
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HR+ K N+LL K K++DFGLA +D H GT GY++PE
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 203
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D+++ GV+L LL G P
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G + A K+++ D K+E E + +L+ P ++ L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 150 CSDRR-KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
+ LV+D + G L E + + S+ D ++ LE+ + + H S
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILES---IAYCH---S 122
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HR+ K N+LL K K++DFGLA +D H GT GY++PE
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 179
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D+++ GV+L LL G P
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 166
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 167 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 212
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 272
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 273 RVSXECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY- 142
G F K VV +GL+ VA+K++ + E E M E+++L L +
Sbjct: 52 GAFGK--VVEATAYGLIKSDA---AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 143 LLALLGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD------------WETR 189
++ LLG C+ L++ +Y G L L S + SK E
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-FICSKTSPAIMEDDELALDLEDL 165
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
L + + AKG+ FL S IHRD + NILL K+ DFGLA+ + + V
Sbjct: 166 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG+ L EL +
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 158
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 159 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 204
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 264
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQN 293
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G + A K+++ D K+E E + +L+ P ++ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 150 CSDRR-KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
+ LV+D + G L E + + S+ D ++ LE+ + + H S
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILES---IAYCH---S 123
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HR+ K N+LL K K++DFGLA +D H GT GY++PE
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 180
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D+++ GV+L LL G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 152
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 153 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 198
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G + A K+++ D K+E E + +L+ P ++ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 150 CSDRR-KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
+ LV+D + G L E + + S+ D ++ LE+ + + H S
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILES---IAYCH---S 123
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HR+ K N+LL K K++DFGLA +D H GT GY++PE
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLK 180
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D+++ GV+L LL G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 146
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 147 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 192
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 252
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 253 RVSXECQHLIRWCLALRPSDRPTFEEIQN 281
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY- 142
G F K VV +GL+ VA+K++ + E E M E+++L L +
Sbjct: 57 GAFGK--VVEATAYGLIKSDA---AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 143 LLALLGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD------------WETR 189
++ LLG C+ L++ +Y G L L S + SK E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-FICSKTSPAIMEDDELALDLEDL 170
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
L + + AKG+ FL S IHRD + NILL K+ DFGLA+ + + V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG+ L EL +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY- 142
G F K VV +GL+ VA+K++ + E E M E+++L L +
Sbjct: 57 GAFGK--VVEATAYGLIKSDA---AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 143 LLALLGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD------------WETR 189
++ LLG C+ L++ +Y G L L S + SK E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-FICSKTSPAIMEDDELALDLEDL 170
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
L + + AKG+ FL S IHRD + NILL K+ DFGLA+ + + V
Sbjct: 171 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG+ L EL +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 13/107 (12%)
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHV 248
L I ++ A+ +EFLH S ++HRD K SNI + KV DFGL + D+ V
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 249 STRV---------LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELL 286
T + +GT+ Y++PE + + K D++S G++L ELL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 139
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 140 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 185
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 116/269 (43%), Gaps = 63/269 (23%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 171
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 172 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 217
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPIDVNKPSGEGV----- 302
T GT+ Y PE+ +S V+S G++L +++ G +P + ++ G
Sbjct: 218 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 277
Query: 303 --------LVSWALP-RLTDREKILEIMD 322
L+ W L R +DR EI +
Sbjct: 278 RVSXECQHLIRWCLALRPSDRPTFEEIQN 306
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 152
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 153 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 198
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 151
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 152 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 197
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 152
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 153 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 198
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAIK++ + + ++ + +E +E+L +L
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 74 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 126
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 127 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 180
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 152
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 153 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 198
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 151
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 152 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 197
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAIK++ + + ++ + +E +E+L +L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 75 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 127
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 181
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAIK++ + + ++ + +E +E+L +L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 75 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 127
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 181
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLM--DQAGKQGE----DEFKMEVELLGRLRSPY-- 142
++G GGFG VY G+ +S+ VAIK + D+ GE MEV LL ++ S +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 143 LLALLGYCSDRRKLLV-----------YDYMAN-GGLQEHLYPANGSNSVASKLDWETRL 190
++ LL + ++ +D++ G LQE L A W+
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL---------ARSFFWQV-- 151
Query: 191 RIALEAAKGLEFLHEHC-SPPVIHRDFKSSNILLDKNF-HAKVSDFGLAKIGSDKAGGHV 248
LEA + HC + V+HRD K NIL+D N K+ DFG + D V
Sbjct: 152 ---LEAVR-------HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----V 197
Query: 249 STRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRVPID 293
T GT+ Y PE+ +S V+S G++L +++ G +P +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 95/218 (43%), Gaps = 24/218 (11%)
Query: 85 GGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPY- 142
G F K VV +GL+ VA+K++ + E E M E+++L L +
Sbjct: 34 GAFGK--VVEATAYGLIKSDA---AMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 143 LLALLGYCS-DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD------------WETR 189
++ LLG C+ L++ +Y G L L S + SK E
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDS-FICSKTSPAIMEDDELALDLEDL 147
Query: 190 LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVS 249
L + + AKG+ FL S IHRD + NILL K+ DFGLA+ + + V
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 250 TRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
++APE T +SDV+SYG+ L EL +
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAIK++ + + ++ + +E +E+L +L
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 75 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 127
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 181
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Query: 92 VVGHGGFGLVY--RGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG- 148
V+G G F V+ + L+ G+ A+K + ++ + + E+ +L +++ ++ L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
Y S LV ++ G L + + V ++ D ++ L A K +LHE+
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVK---YLHEN-- 125
Query: 209 PPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
++HRD K N+L ++N ++DFGL+K+ + G +ST GT GYVAPE
Sbjct: 126 -GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMST-ACGTPGYVAPEVLA 180
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D +S GV+ LL G P
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 110/249 (44%), Gaps = 49/249 (19%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLSNGRK-VAIKLMDQAGKQGEDEFKM--EVELLGRLRSPY 142
+ +++G G +G VY N K VAIK +++ + D ++ E+ +L RL+S Y
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 143 LLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAK---- 198
++ L LL +D E ++S KL ++T + + + K
Sbjct: 89 IIRLHDLIIPE-DLLKFD--------ELYIVLEIADSDLKKL-FKTPIFLTEQHVKTILY 138
Query: 199 ----GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDK---------- 243
G +F+HE +IHRD K +N LL+++ K+ DFGLA+ I SDK
Sbjct: 139 NLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 244 ------AGGHVS------TRVLGTQGYVAPEYALTGHLTTKS-DVYSYGVVLLELLTGRV 290
G H T + T+ Y APE L T S D++S G + ELL +
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL-NMM 254
Query: 291 PIDVNKPSG 299
+N P+
Sbjct: 255 KSHINNPTN 263
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN S + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V + VL G VA+K + Q + ++ E+ LL + +++L
Sbjct: 32 IGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---CTNFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ EL+ G V
Sbjct: 200 MGYAANVDIWSVGCIMGELVKGCV 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAIK++ + + ++ + +E +E+L +L
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 81 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 133
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 134 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 187
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 82 LNVFTPQKTL---EEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH-- 136
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 192
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 90 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 144
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 200
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 31 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 87
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 88 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 142
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 143 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 198
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 199 MGYKENVDIWSVGCIMGEMVRHKI 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 81
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 82 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 136
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 137 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 192
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 193 MGYKENVDIWSVGCIMGEMVRHKI 216
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 83 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 137
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 193
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 81 HSATG---GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAG---------KQGEDE 127
HS G + ++G G +V R + ++ A+K++D G ++ +
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 128 FKMEVELLGRLR-SPYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD 185
EV++L ++ P ++ L Y ++ LV+D M G L ++L +++ K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK-- 124
Query: 186 WETR--LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDK 243
ETR +R LE L L+ ++HRD K NILLD + + K++DFG +
Sbjct: 125 -ETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS---CQL 174
Query: 244 AGGHVSTRVLGTQGYVAPEYALTGH------LTTKSDVYSYGVVLLELLTGRVPI 292
G V GT Y+APE + D++S GV++ LL G P
Sbjct: 175 DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 32 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVRHKI 223
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 33 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 89
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 90 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 144
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 200
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 201 MGYKENVDIWSVGCIMGEMVRHKI 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 127 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 181
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 237
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 70 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 126
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 127 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 181
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 182 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 237
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 238 MGYKENVDIWSVGCIMGEMVRHKI 261
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
+ K +G G +G V++ N I + + +DE E+ LL L+
Sbjct: 4 YEKLEKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 142 YLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L SD++ LV+++ + L+++ NG LD E + KGL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGL 114
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
F H S V+HRD K N+L+++N K++DFGLA+ + + V T Y
Sbjct: 115 GFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRP 169
Query: 261 PEYALTGHL-TTKSDVYSYGVVLLELLTGRVPI 292
P+ L +T D++S G + EL P+
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y VL R VAIK + Q + ++ E+ L+ + +++L
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISL 82
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + L L AN + +LD E + + G++ LH
Sbjct: 83 LNVFTPQKTL---EEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 137
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 193
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 194 MGYKENVDIWSVGCIMGEMVRHKI 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 90 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 144
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 200
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKGGV 224
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRL 138
S T + +G G F +V R V L G + A K+++ D K+E E + L
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 139 RSPYLLALLGYCSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
+ ++ L S+ LV+D + G L E + + S+ D ++ LEA
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV----AREYYSEADASHCIQQILEAV 116
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLD---KNFHAKVSDFGLA-KIGSDKAGGHVSTRVL 253
LH H V+HRD K N+LL K K++DFGLA ++ D+
Sbjct: 117 -----LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWF---GFA 167
Query: 254 GTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT GY++PE D+++ GV+L LL G P
Sbjct: 168 GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 81 HSATG---GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAG---------KQGEDE 127
HS G + ++G G +V R + ++ A+K++D G ++ +
Sbjct: 10 HSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 69
Query: 128 FKMEVELLGRLR-SPYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD 185
EV++L ++ P ++ L Y ++ LV+D M G L ++L +++ K
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK-- 124
Query: 186 WETR--LRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDK 243
ETR +R LE L L+ ++HRD K NILLD + + K++DFG +
Sbjct: 125 -ETRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS---CQL 174
Query: 244 AGGHVSTRVLGTQGYVAPEYALTGH------LTTKSDVYSYGVVLLELLTGRVPI 292
G V GT Y+APE + D++S GV++ LL G P
Sbjct: 175 DPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 101/206 (49%), Gaps = 26/206 (12%)
Query: 92 VVGH-GGFGLVYRGVLSNGRKVAI-KLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-G 148
++G G FG VY+ +A K++D ++ +++ +E+++L P ++ LL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 149 YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD---WETRLRIAL-EAAKGLEFLH 204
+ + ++ ++ A G + ++V +L+ E+++++ + L +LH
Sbjct: 76 FYYENNLWILIEFCAGGAV----------DAVMLELERPLTESQIQVVCKQTLDALNYLH 125
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYA 264
++ +IHRD K+ NIL + K++DFG++ + + +GT ++APE
Sbjct: 126 DN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT-RTXIQRRDSFIGTPYWMAPEVV 181
Query: 265 LTGH-----LTTKSDVYSYGVVLLEL 285
+ K+DV+S G+ L+E+
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-KVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
++ N +G G +G V V R + A K + + + D FK E+E++ L P ++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L D + + + GG L+ V + D RI + + + H+
Sbjct: 71 LYETFEDNTDIYLVMELCTGG---ELFERVVHKRVFRESD---AARIMKDVLSAVAYCHK 124
Query: 206 HCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
V HRD K N L + K+ DFGLA K G + T+V GT YV+P+
Sbjct: 125 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKV-GTPYYVSPQ 178
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
L G + D +S GV++ LL G P
Sbjct: 179 -VLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAI+++ + + ++ + +E +E+L +L
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 200 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 252
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 253 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 306
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 101/227 (44%), Gaps = 35/227 (15%)
Query: 86 GFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAG---------KQGEDEFKMEVELL 135
+ ++G G +V R + ++ A+K++D G ++ + EV++L
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 136 GRLRS-PYLLALLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETR--LR 191
++ P ++ L Y ++ LV+D M G L ++L +++ K ETR +R
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEK---ETRKIMR 118
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTR 251
LE L L+ ++HRD K NILLD + + K++DFG + G
Sbjct: 119 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLRE 169
Query: 252 VLGTQGYVAPEYALTGH------LTTKSDVYSYGVVLLELLTGRVPI 292
V GT Y+APE + D++S GV++ LL G P
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPEVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKGGV 223
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 90 SNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQ------AGKQGEDEFKME--VELLGRLRS 140
S +G G G V +KVAI+++ + + ++ + +E +E+L +L
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 141 PYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
P ++ + + +V + M G L + + KL + L +
Sbjct: 214 PCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 266
Query: 201 EFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
++LHE+ +IHRD K N+LL +++ K++DFG +KI + + + + GT
Sbjct: 267 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS---LMRTLCGTPT 320
Query: 258 YVAPEYAL---TGHLTTKSDVYSYGVVLLELLTGRVPI 292
Y+APE + T D +S GV+L L+G P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGR-KVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
++ N +G G +G V V R + A K + + + D FK E+E++ L P ++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L D + + + GG L+ V + D RI + + + H+
Sbjct: 88 LYETFEDNTDIYLVMELCTGG---ELFERVVHKRVFRESD---AARIMKDVLSAVAYCHK 141
Query: 206 HCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
V HRD K N L + K+ DFGLA K G + T+V GT YV+P+
Sbjct: 142 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLA--ARFKPGKMMRTKV-GTPYYVSPQ 195
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
L G + D +S GV++ LL G P
Sbjct: 196 -VLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 123 QGEDEFKMEVELLGRLRSPYLLALLG--YCSDRRKLLVYDYMANGGLQEHLYPANGSNSV 180
GE K E++LL RLR ++ L+ Y +++K+ + G+QE L +SV
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML------DSV 101
Query: 181 ASKLDWETRLRIA------LEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDF 234
K R + + GLE+LH S ++H+D K N+LL K+S
Sbjct: 102 PEK-----RFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISAL 153
Query: 235 GLAKIGSDKAGGHVSTRVLGTQGYVAPEYA--LTGHLTTKSDVYSYGVVLLELLTGRVPI 292
G+A+ A G+ + PE A L K D++S GV L + TG P
Sbjct: 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 293 D 293
+
Sbjct: 214 E 214
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTR 251
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 261 RLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTR 251
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 263 RLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTR 251
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 256 RLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 193 ALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK-IGSDKAGGHVSTR 251
+ + AKG+EFL S IHRD + NILL + K+ DFGLA+ I D
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 252 VLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLT 287
L + ++APE T +SDV+S+GV+L E+ +
Sbjct: 254 RLPLK-WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRL 138
S T + +G G F +V R + + G++ A K+++ D K+E E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 139 RSPYLLALLGYCSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
+ P ++ L S+ LV+D + G L E + + S+ D ++ LE+
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV----AREYYSEADASHCIQQILESV 116
Query: 198 KGLEFLHEHCS-PPVIHRDFKSSNILL---DKNFHAKVSDFGLA-KIGSDKAGGHVSTRV 252
HC ++HRD K N+LL K K++DFGLA ++ D+
Sbjct: 117 N-------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GF 166
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT GY++PE D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 23/220 (10%)
Query: 82 SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRL 138
S T + +G G F +V R + + G++ A K+++ D K+E E + L
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 139 RSPYLLALLGYCSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAA 197
+ P ++ L S+ LV+D + G L E + + S+ D ++ LE+
Sbjct: 61 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV----AREYYSEADASHCIQQILESV 116
Query: 198 KGLEFLHEHCS-PPVIHRDFKSSNILL---DKNFHAKVSDFGLA-KIGSDKAGGHVSTRV 252
HC ++HRD K N+LL K K++DFGLA ++ D+
Sbjct: 117 N-------HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWF---GF 166
Query: 253 LGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
GT GY++PE D+++ GV+L LL G P
Sbjct: 167 AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 91 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 145
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + + T+ Y APE L
Sbjct: 146 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMVPFVVTRYYRAPEVILG 201
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ G V
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKGGV 225
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 31/225 (13%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLM---DQAGKQGEDEFKMEVE 133
FKQL+ T + G +++G G + +K++ D + ++ D F E
Sbjct: 9 FKQLNFLTK-------LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRD-FNEECP 59
Query: 134 LLGRLRSPYLLALLGYCSDR---RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRL 190
L P +L +LG C L+ +M G L L+ G+N V +D +
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH--EGTNFV---VDQSQAV 114
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+ AL+ A+G+ FLH P + S ++++D++ A++S +D S
Sbjct: 115 KFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARIS-------MADVKFSFQSP 166
Query: 251 RVLGTQGYVAPEYALTGHLTTK---SDVYSYGVVLLELLTGRVPI 292
+ +VAPE T +D++S+ V+L EL+T VP
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 78 KQLH----SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEV 132
+QLH T G+ +G G + + R + + + A+K++D++ + +E ++
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI-- 68
Query: 133 ELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGG--LQEHLYPANGSNSVASKLDWETRL 190
LL + P ++ L D + + V + GG L + L S AS
Sbjct: 69 -LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASA------- 120
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNIL-LDKNFHA---KVSDFGLAKIGSDKAGG 246
+ K +E+LH + V+HRD K SNIL +D++ + ++ DFG AK +A
Sbjct: 121 -VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAEN 174
Query: 247 HVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ T +VAPE D++S GV+L +LTG P
Sbjct: 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 76 TFKQLHSATGGFSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQ----AGKQG--EDEF 128
TF+Q + +G G F +V + G++ A K + + + ++G +E
Sbjct: 4 TFRQ-EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 129 KMEVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWET 188
+ EV +L +R P ++ L ++ +++ + +GG L+ ++ +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQ 119
Query: 189 RLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDK 243
L+ L+ G+ +LH S + H D K NI LLDKN K+ DFG+A KI
Sbjct: 120 FLKQILD---GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---- 169
Query: 244 AGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
G+ + GT +VAPE L ++D++S GV+ LL+G P
Sbjct: 170 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 82
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 83 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 137
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 138 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 193
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 194 MGYKENVDLWSVGCIMGEMVCHKI 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 93 VGHGGFGLVYRGVLS-NGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + G++ A K + + + ++G +E + EV +L +R P ++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L ++ +++ + +GG L+ ++ + L+ L+ G+ +LH
Sbjct: 73 LHDIFENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQFLKQILD---GVHYLH- 125
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
S + H D K NI LLDKN K+ DFG+A KI G+ + GT +VA
Sbjct: 126 --SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGTPEFVA 179
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE L ++D++S GV+ LL+G P
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSPYLLALL 147
+G G +G+VY+ + G A+K + + EDE E+ +L L+ ++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 148 GYCSDRRKL-LVYDYMANGGLQEHLYPANGS-NSVASKLDWETRLRIALEAAKGLEFLHE 205
+++L LV++++ + L++ L G SV +K L+ G+ + H+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCHD 118
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
V+HRD K N+L+++ K++DFGLA+ + T + T Y AP+ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLM 173
Query: 266 -TGHLTTKSDVYSYGVVLLELLTG 288
+ +T D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 93
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 94 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 148
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + T + T+ Y APE L
Sbjct: 149 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMTPYVVTRYYRAPEVILG 204
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 205 MGYKENVDLWSVGCIMGEMVCHKI 228
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 132
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + +V + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + +A ++G +E + EV +L ++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L +R +++ + +GG L+ S+ + + ++ L+ G+ +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILD---GVNYLH- 132
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ + H D K NI LLDKN H K+ DFGLA D G + GT +VAP
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAP 187
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E L ++D++S GV+ LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + +A ++G +E + EV +L ++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L +R +++ + +GG L+ S+ + + ++ L+ G+ +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILD---GVNYLH- 132
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ + H D K NI LLDKN H K+ DFGLA D G + GT +VAP
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAP 187
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E L ++D++S GV+ LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + +A ++G +E + EV +L ++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L +R +++ + +GG L+ S+ + + ++ L+ G+ +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILD---GVNYLH- 132
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ + H D K NI LLDKN H K+ DFGLA D G + GT +VAP
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAP 187
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E L ++D++S GV+ LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G++ A K+++ D K+E E + L+ P ++ L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 150 CSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
S+ L++D + G L E + + S+ D ++ LEA LH H
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIV----AREYYSEADASHCIQQILEAV-----LHCH-Q 139
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLA--KIGSDKAGGHVSTRVLGTQGYVAPEY 263
V+HRD K N+LL K K++DFGLA G +A + GT GY++PE
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA----GTPGYLSPEV 195
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
D+++ GV+L LL G P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSPYLLALL 147
+G G +G+VY+ + G A+K + + EDE E+ +L L+ ++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 148 GYCSDRRKL-LVYDYMANGGLQEHLYPANGS-NSVASKLDWETRLRIALEAAKGLEFLHE 205
+++L LV++++ + L++ L G SV +K L+ G+ + H+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCHD 118
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
V+HRD K N+L+++ K++DFGLA+ + T + T Y AP+ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLM 173
Query: 266 -TGHLTTKSDVYSYGVVLLELLTG 288
+ +T D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 25/212 (11%)
Query: 93 VGHGGFGLVYRGVLS-NGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + G++ A K + + + ++G +E + EV +L +R P ++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L ++ +++ + +GG L+ ++ + L+ L+ G+ +LH
Sbjct: 94 LHDIFENKTDVVLILELVSGG---ELFDFLAEKESLTEDEATQFLKQILD---GVHYLH- 146
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYVA 260
S + H D K NI LLDKN K+ DFG+A KI G+ + GT +VA
Sbjct: 147 --SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI----EAGNEFKNIFGTPEFVA 200
Query: 261 PEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
PE L ++D++S GV+ LL+G P
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + +A ++G +E + EV +L ++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L +R +++ + +GG L+ S+ + + ++ L+ G+ +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILD---GVNYLH- 132
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ + H D K NI LLDKN H K+ DFGLA D G + GT +VAP
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAP 187
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E L ++D++S GV+ LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 98/204 (48%), Gaps = 24/204 (11%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSPYLLALL 147
+G G +G+VY+ + G A+K + + EDE E+ +L L+ ++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK---KIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 148 GYCSDRRKL-LVYDYMANGGLQEHLYPANGS-NSVASKLDWETRLRIALEAAKGLEFLHE 205
+++L LV++++ + L++ L G SV +K L+ G+ + H+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAK-------SFLLQLLNGIAYCHD 118
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
V+HRD K N+L+++ K++DFGLA+ + T + T Y AP+ +
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLM 173
Query: 266 -TGHLTTKSDVYSYGVVLLELLTG 288
+ +T D++S G + E++ G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLM----DQAGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + +A ++G +E + EV +L ++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L +R +++ + +GG L+ S+ + + ++ L+ G+ +LH
Sbjct: 80 LHDVYENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILD---GVNYLH- 132
Query: 206 HCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAP 261
+ + H D K NI LLDKN H K+ DFGLA D G + GT +VAP
Sbjct: 133 --TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAP 187
Query: 262 EYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
E L ++D++S GV+ LL+G P
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 21/213 (9%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDE-----FKMEVELLGRLRSP 141
+ K +G G +G V++ N I + + +DE E+ LL L+
Sbjct: 4 YEKLEKIGEGTYGTVFKA--KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 142 YLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGL 200
++ L SD++ LV+++ + L+++ NG LD E + KGL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD------LDPEIVKSFLFQLLKGL 114
Query: 201 EFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVA 260
F H S V+HRD K N+L+++N K+++FGLA+ + + V T Y
Sbjct: 115 GFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRP 169
Query: 261 PEYALTGHL-TTKSDVYSYGVVLLELLTGRVPI 292
P+ L +T D++S G + EL P+
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 128
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + +V + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 27/226 (11%)
Query: 78 KQLH----SATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEV 132
+QLH T G+ +G G + + R + + + A+K++D++ + +E ++
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI-- 68
Query: 133 ELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGG--LQEHLYPANGSNSVASKLDWETRL 190
LL + P ++ L D + + V + GG L + L S AS
Sbjct: 69 -LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASA------- 120
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNIL-LDKNFHA---KVSDFGLAKIGSDKAGG 246
+ K +E+LH + V+HRD K SNIL +D++ + ++ DFG AK +A
Sbjct: 121 -VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAEN 174
Query: 247 HVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ T +VAPE D++S GV+L LTG P
Sbjct: 175 GLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 128
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + +V + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 138
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + +V + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 80 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 132
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + +V + APE
Sbjct: 133 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 10/99 (10%)
Query: 198 KGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQG 257
KG+E+LH +IHRD K SN+L+ ++ H K++DFG++ K + + +GT
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSDALLSNTVGTPA 202
Query: 258 YVAPEYALTGHLTTKS----DVYSYGVVLLELLTGRVPI 292
++APE +L+ S DV++ GV L + G+ P
Sbjct: 203 FMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G FG V+R G + A+K + + E E+ L SP ++ L G
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 136
Query: 152 DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + ++ + GG L G L + L +A +GLE+LH S +
Sbjct: 137 EGPWVNIFMELLEGGSLGQLVKEQGC------LPEDRALYYLGQALEGLEYLH---SRRI 187
Query: 212 IHRDFKSSNILLDKN-FHAKVSDFGLA-KIGSDKAGGHVST--RVLGTQGYVAPEYALTG 267
+H D K+ N+LL + HA + DFG A + D G + T + GT+ ++APE L
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 268 HLTTKSDVYSYGVVLLELLTGRVP 291
K DV+S ++L +L G P
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G GG GLV+ V ++ ++VAIK + Q E++++ RL ++ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 152 DRRKLLVYDYMANGGLQE----HLYPANGSNSVASKLD----WETRLRIAL-EAAKGLEF 202
L D G L E ++ +A+ L+ E R+ + + +GL++
Sbjct: 79 PSGSQLTDDV---GSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKY 135
Query: 203 LHEHCSPPVIHRDFKSSNILLD-KNFHAKVSDFGLAKIGSDKAG--GHVSTRVLGTQGYV 259
+H S V+HRD K +N+ ++ ++ K+ DFGLA+I GH+S ++ T+ Y
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYR 191
Query: 260 APEYALTGHLTTKS-DVYSYGVVLLELLTGR 289
+P L+ + TK+ D+++ G + E+LTG+
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCS 151
+G G FG V+R G + A+K + + E E+ L SP ++ L G
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAGLTSPRIVPLYGAVR 155
Query: 152 DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
+ + ++ + GG L G L + L +A +GLE+LH S +
Sbjct: 156 EGPWVNIFMELLEGGSLGQLVKEQGC------LPEDRALYYLGQALEGLEYLH---SRRI 206
Query: 212 IHRDFKSSNILLDKN-FHAKVSDFGLA-KIGSDKAGGHVST--RVLGTQGYVAPEYALTG 267
+H D K+ N+LL + HA + DFG A + D G + T + GT+ ++APE L
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 268 HLTTKSDVYSYGVVLLELLTGRVP 291
K DV+S ++L +L G P
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 93 VGHGGFGLVYRGVLSN-GRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V ++ A K+++ D K+E E + L+ P ++ L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 150 CSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
S+ LV+D + G L E + + S+ D + LE+ + +H+H
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIV----AREYYSEADASHCIHQILES---VNHIHQH-- 149
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLA--KIGSDKAGGHVSTRVLGTQGYVAPEY 263
++HRD K N+LL K K++DFGLA G +A + GT GY++PE
Sbjct: 150 -DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA----GTPGYLSPEV 204
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
D+++ GV+L LL G P
Sbjct: 205 LRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 76 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 128
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + V + APE
Sbjct: 129 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 17/203 (8%)
Query: 93 VGHGGFGLVYRGVLS--NGR--KVAIKLMDQ---AGKQGEDEFKMEVELLGRLRSPYLLA 145
+G G FG+V RG +G+ VA+K + + + D+F EV + L L+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L G +V + G L + L G + T R A++ A+G+ +L
Sbjct: 86 LYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLG------TLSRYAVQVAEGMGYLE- 138
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYA 264
S IHRD + N+LL K+ DFGL + V + APE
Sbjct: 139 --SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 265 LTGHLTTKSDVYSYGVVLLELLT 287
T + SD + +GV L E+ T
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDIWSVGCIMGEMVCHKI 223
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPAFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 93 VGHGGFGLV---YRGVLSNGRKVAIKLMD---QAGKQGEDEFKMEVELLGRLRSPYLLAL 146
+G G G+V Y +L R VAIK + Q + ++ E+ L+ + ++ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 147 LGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
L + ++ L + + + L AN + +LD E + + G++ LH
Sbjct: 89 LNVFTPQKSL---EEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH-- 143
Query: 207 CSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALT 266
S +IHRD K SNI++ + K+ DFGLA+ + + T+ Y APE L
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---GTSFMMEPEVVTRYYRAPEVILG 199
Query: 267 GHLTTKSDVYSYGVVLLELLTGRV 290
D++S G ++ E++ ++
Sbjct: 200 MGYKENVDLWSVGCIMGEMVCHKI 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 32/234 (13%)
Query: 93 VGHGGFGLV--YRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G GGF V G L +G A+K + +Q +E + E ++ P +L L+ YC
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 151 SDRR-----KLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
R L+ + G L + + ++ + L + L +GLE +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE---DQILWLLLGICRGLEAIH- 151
Query: 206 HCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHV--STRVLGTQ------- 256
+ HRD K +NILL + D G ++A HV S + L Q
Sbjct: 152 --AKGYAHRDLKPTNILLGDEGQPVLMDLG----SMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 257 --GYVAPE-YALTGH--LTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGVLVS 305
Y APE +++ H + ++DV+S G VL ++ G P D+ G+ V ++
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA 259
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID----FGNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 130
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 183
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 130
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 131 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 183
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 184 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 87 FSKSNVVGHGGFGLVYRGVLSNGRK-VAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLA 145
F + +G G +VYR +K A+K++ + + + E+ +L RL P ++
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIK 112
Query: 146 LLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHE 205
L ++ + + GG L+ S+ D ++ LEA + +LHE
Sbjct: 113 LKEIFETPTEISLVLELVTGG---ELFDRIVEKGYYSERDAADAVKQILEA---VAYLHE 166
Query: 206 HCSPPVIHRDFKSSNILLDK---NFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPE 262
+ ++HRD K N+L + K++DFGL+KI + + V GT GY APE
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---LMKTVCGTPGYCAPE 220
Query: 263 YALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
+ D++S G++ LL G P
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 28/208 (13%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRS-PYLLALLGYC 150
+G G + V+ + ++N KV +K++ K ++ K E+++L LR P ++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKK---NKIKREIKILENLRGGPNIITLADIV 101
Query: 151 SD---RRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHC 207
D R LV++++ N ++ LY + D++ R + E K L++ H
Sbjct: 102 KDPVSRTPALVFEHVNNTDFKQ-LY--------QTLTDYDIRFYM-YEILKALDYCH--- 148
Query: 208 SPPVIHRDFKSSNILLDKNFHAKVS--DFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYAL 265
S ++HRD K N+++D H K+ D+GLA+ G + RV ++ + PE +
Sbjct: 149 SMGIMHRDVKPHNVMIDHE-HRKLRLIDWGLAEFYH--PGQEYNVRV-ASRYFKGPELLV 204
Query: 266 TGHLTTKS-DVYSYGVVLLELLTGRVPI 292
+ S D++S G +L ++ + P
Sbjct: 205 DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 86 GFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLL 144
G+ +G G + R V + + A+K++D++ + +E ++ LL + P ++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNII 84
Query: 145 ALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEA-AKGLEF 202
L D + + LV + M G L + + + K E L K +E+
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKI--------LRQKFFSEREASFVLHTIGKTVEY 136
Query: 203 LHEHCSPPVIHRDFKSSNIL-LDKNFHA---KVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
LH S V+HRD K SNIL +D++ + ++ DFG AK +A + T +
Sbjct: 137 LH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANF 191
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPS 298
VAPE D++S G++L +L G P N PS
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPS 230
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVE--LLGRLRSPYLLALLGY 149
+G G F +V R V + G++ A +++ D K+E E + L+ P ++ L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 150 CSDR-RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCS 208
S+ L++D + G L E + + S+ D ++ LEA LH H
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIV----AREYYSEADASHCIQQILEAV-----LHCH-Q 128
Query: 209 PPVIHRDFKSSNILLD---KNFHAKVSDFGLA--KIGSDKAGGHVSTRVLGTQGYVAPEY 263
V+HR+ K N+LL K K++DFGLA G +A + GT GY++PE
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA----GTPGYLSPEV 184
Query: 264 ALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
D+++ GV+L LL G P
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYL 143
+ K +G G FG V++ G+KVA+K LM+ + E+++L L+ +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 LALLGYCSDRRK---------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL 194
+ L+ C + LV+D+ EH SN V K R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC------EHDLAGLLSN-VLVKFTLSEIKRVMQ 132
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTR 251
GL ++H + ++HRD K++N+L+ ++ K++DFGLA+ + + R
Sbjct: 133 MLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 252 VLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPI 292
V+ T Y PE L D++ G ++ E+ T R PI
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 24/220 (10%)
Query: 86 GFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLL 144
G+ +G G + R V + + A+K++D++ + +E ++ LL + P ++
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHPNII 84
Query: 145 ALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEA-AKGLEF 202
L D + + LV + M G L + + + K E L K +E+
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKI--------LRQKFFSEREASFVLHTIGKTVEY 136
Query: 203 LHEHCSPPVIHRDFKSSNIL-LDKNFHA---KVSDFGLAKIGSDKAGGHVSTRVLGTQGY 258
LH S V+HRD K SNIL +D++ + ++ DFG AK +A + T +
Sbjct: 137 LH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANF 191
Query: 259 VAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPS 298
VAPE D++S G++L +L G P N PS
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPS 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 16/207 (7%)
Query: 87 FSKSNVVGHGGFGLVYRGVLS-NGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLL 144
+ K + +G G + VY+G VA+K + ++G + EV LL L+ ++
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 145 ALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFL 203
L + L LV++Y+ + L+++L + + ++ + +GL +
Sbjct: 64 TLHDIIHTEKSLTLVFEYL-DKDLKQYL------DDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 204 HEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEY 263
H V+HRD K N+L+++ K++DFGLA+ S + + V T Y P+
Sbjct: 117 HRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDI 171
Query: 264 AL-TGHLTTKSDVYSYGVVLLELLTGR 289
L + +T+ D++ G + E+ TGR
Sbjct: 172 LLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYL 143
+ K +G G FG V++ G+KVA+K LM+ + E+++L L+ +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 LALLGYCSDRRK---------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL 194
+ L+ C + LV+D+ EH SN V K R+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFC------EHDLAGLLSN-VLVKFTLSEIKRVMQ 132
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTR 251
GL ++H + ++HRD K++N+L+ ++ K++DFGLA+ + + R
Sbjct: 133 MLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 252 VLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPI 292
V+ T Y PE L D++ G ++ E+ T R PI
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYL 143
+ K +G G FG V++ G+KVA+K LM+ + E+++L L+ +
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 144 LALLGYCSDRRK---------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL 194
+ L+ C + LV+D+ EH SN V K R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFC------EHDLAGLLSN-VLVKFTLSEIKRVMQ 132
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTR 251
GL ++H + ++HRD K++N+L+ ++ K++DFGLA+ + + R
Sbjct: 133 MLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 252 VLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPI 292
V+ T Y PE L D++ G ++ E+ T R PI
Sbjct: 190 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 27/213 (12%)
Query: 93 VGHGGFGLVYRG-VLSNGRKVAIKLMDQ----AGKQG--EDEFKMEVELLGRLRSPYLLA 145
+G G F +V + S G + A K + + + ++G ++ + EV +L ++ P ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 146 LLG-YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
L Y + +L+ + +A G L + L + L E + G+ +LH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL-------AEKESLTEEEATEFLKQILNGVYYLH 131
Query: 205 EHCSPPVIHRDFKSSNI-LLDKNF---HAKVSDFGLA-KIGSDKAGGHVSTRVLGTQGYV 259
S + H D K NI LLD+N K+ DFGLA KI G+ + GT +V
Sbjct: 132 ---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF----GNEFKNIFGTPEFV 184
Query: 260 APEYALTGHLTTKSDVYSYGVVLLELLTGRVPI 292
APE L ++D++S GV+ LL+G P
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 87 FSKSNVVGHGGFGLVYRGV-LSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYL 143
+ K +G G FG V++ G+KVA+K LM+ + E+++L L+ +
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 144 LALLGYCSDRRK---------LLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIAL 194
+ L+ C + LV+D+ EH SN V K R+
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFC------EHDLAGLLSN-VLVKFTLSEIKRVMQ 131
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAK---IGSDKAGGHVSTR 251
GL ++H + ++HRD K++N+L+ ++ K++DFGLA+ + + R
Sbjct: 132 MLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 252 VLGTQGYVAPEYAL-TGHLTTKSDVYSYGVVLLELLTGRVPI 292
V+ T Y PE L D++ G ++ E+ T R PI
Sbjct: 189 VV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 15/156 (9%)
Query: 92 VVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRS-PYLLALLGY 149
V+ GGF VY + +GR+ A+K + ++ EV + +L P ++
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 150 CS--------DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLE 201
S + + L+ + G L E L L +T L+I + + ++
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP----LSCDTVLKIFYQTCRAVQ 150
Query: 202 FLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLA 237
+H PP+IHRD K N+LL K+ DFG A
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 90/229 (39%), Gaps = 35/229 (15%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG------EDEFKM-- 130
+LH+ ++ + G +G V GV S G VAIK + G D F
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 131 ---EVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWE 187
E+ LL P +L L R + V+ + + + +++ +
Sbjct: 76 VLREIRLLNHFHHPNILGL-------RDIFVH--FEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 188 TRLRIALEAAK--------GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI 239
R+ I+ + + GL LHE V+HRD NILL N + DF LA+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 240 GSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTK-SDVYSYGVVLLELLT 287
+ A T + + Y APE + TK D++S G V+ E+
Sbjct: 184 DTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 35/231 (15%)
Query: 79 QLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQG------EDEFKM-- 130
+LH+ ++ + G +G V GV S G VAIK + G D F
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 131 ---EVELLGRLRSPYLLALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWE 187
E+ LL P +L L R + V+ + + + +++ +
Sbjct: 76 VLREIRLLNHFHHPNILGL-------RDIFVH--FEEPAMHKLYLVTELMRTDLAQVIHD 126
Query: 188 TRLRIALEAAK--------GLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKI 239
R+ I+ + + GL LHE V+HRD NILL N + DF LA+
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLARE 183
Query: 240 GSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTK-SDVYSYGVVLLELLTGR 289
+ A T + + Y APE + TK D++S G V+ E+ +
Sbjct: 184 DTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R SN VA+K +++ G++ ++ K E+ LR P ++
Sbjct: 26 IGSGNFGVARLMRDKQSN-ELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVI 83
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L +V +Y + G L E + A + ++ ++ + G+ + H +
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-------QLISGVSYCH---AM 133
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALT 266
V HRD K N LLD + K+ DFG +K + H + +GT Y+APE L
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLK 189
Query: 267 GHLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 89 KSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRL---RSPYLL 144
+ +V+G G V + L ++ A+K++++ EVE+L + R+ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
DR LV++ M G + H++ N + + + + + A L+FLH
Sbjct: 77 IEFFEEEDRF-YLVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLH 128
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHA---KVSDFGLAK-IGSDKAGGHVSTRVL----GTQ 256
+ + HRD K NIL + K+ DFGL I + +ST L G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 257 GYVAPEY--ALTGHLTT---KSDVYSYGVVLLELLTGRVPI 292
Y+APE A + + + D++S GV+L LL+G P
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 20/237 (8%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALL-GYCS 151
+G G FG+V+R V ++ +K + + + K E+ +L R +L L + S
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 152 DRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPV 211
++++++++ + E + N+ A +L+ + + + L+FLH H +
Sbjct: 73 MEELVMIFEFISGLDIFERI------NTSAFELNEREIVSYVHQVCEALQFLHSH---NI 123
Query: 212 IHRDFKSSNILLD--KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQ-GYVAPEYALTGH 268
H D + NI+ ++ K+ +FG A+ K G + R+L T Y APE
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQAR--QLKPGDNF--RLLFTAPEYYAPEVHQHDV 179
Query: 269 LTTKSDVYSYGVVLLELLTGRVPI--DVNKPSGEGVL-VSWALPRLTDREKILEIMD 322
++T +D++S G ++ LL+G P + N+ E ++ + +E +E MD
Sbjct: 180 VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 126/303 (41%), Gaps = 49/303 (16%)
Query: 76 TFKQLHSATGGFSKSNVVGHGGFGLVYRGVLS--------NGRKVAIKLMDQAGKQGEDE 127
F ++ + F++S +G G F +++GV + +V +K++D+A + +
Sbjct: 1 VFHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 128 FKMEVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDW 186
F ++ +L +L+ G C +LV +++ G L +L N + W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL----KKNKNCINILW 114
Query: 187 ETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGG 246
+L +A + A + FL E+ +IH + + NILL + K + K+ SD
Sbjct: 115 --KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL-SDPG-- 166
Query: 247 HVSTRVLGTQ------GYVAPEYALT-GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSG 299
+S VL +V PE +L +D +S+G L E+ +G +KP
Sbjct: 167 -ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG-----DKP-- 218
Query: 300 EGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADVV 359
L L + K+ D Q + ++A + C+ E D+RP ++
Sbjct: 219 --------LSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAII 267
Query: 360 QSL 362
+ L
Sbjct: 268 RDL 270
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 128/304 (42%), Gaps = 51/304 (16%)
Query: 76 TFKQLHSATGGFSKSNVVGHGGFGLVYRGVLS--------NGRKVAIKLMDQAGKQGEDE 127
F ++ + F++S +G G F +++GV + +V +K++D+A + +
Sbjct: 1 VFHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES 58
Query: 128 FKMEVELLGRLRSPYLLALLG--YCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLD 185
F ++ +L +L+ G +C D +LV +++ G L +L N +
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGD-ENILVQEFVKFGSLDTYL----KKNKNCINIL 113
Query: 186 WETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAG 245
W +L +A + A + FL E+ +IH + + NILL + K + K+ SD
Sbjct: 114 W--KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL-SDPG- 166
Query: 246 GHVSTRVLGTQ------GYVAPEYALT-GHLTTKSDVYSYGVVLLELLTGRVPIDVNKPS 298
+S VL +V PE +L +D +S+G L E+ +G +KP
Sbjct: 167 --ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGG-----DKP- 218
Query: 299 GEGVLVSWALPRLTDREKILEIMDPALEGQYSMKEVIQVAAIAAMCVQPEADYRPLMADV 358
L L + K+ D Q + ++A + C+ E D+RP +
Sbjct: 219 ---------LSALDSQRKLQFYED---RHQLPAPKAAELANLINNCMDYEPDHRPSFRAI 266
Query: 359 VQSL 362
++ L
Sbjct: 267 IRDL 270
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 93 VGHGGFGLVYRGVLSNGRKVAIKLMDQAGKQGEDEFKM-EVELLGRLRSPYLLALLGYC- 150
VG G +G VY+ +G+ + Q G E+ LL L+ P +++L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 151 --SDRRKLLVYDYMANGGLQE--HLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
+DR+ L++DY A L + A+ +N +L + + G+ +LH +
Sbjct: 89 SHADRKVWLLFDY-AEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 207 CSPPVIHRDFKSSNILL----DKNFHAKVSDFGLAKIGSDKAGGHVS-TRVLGTQGYVAP 261
V+HRD K +NIL+ + K++D G A++ + V+ T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 262 EYALTG-HLTTKSDVYSYGVVLLELLTG 288
E L H T D+++ G + ELLT
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R +N VA+K +++ G++ ++ K E+ LR P ++
Sbjct: 27 IGAGNFGVARLMRDKQAN-ELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L +V +Y + G L E + A + ++ ++ + G+ + H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI-------SGVSYAH---AM 134
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
V HRD K N LLD + K++DFG +K + +GT Y+APE L
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKK 191
Query: 268 HLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R L+ VA+K +++ G ++ + E+ LR P ++
Sbjct: 28 IGSGNFGVARLMRDKLTK-ELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L ++ +Y + G L E + A + ++ ++ L G+ + H S
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCH---SM 135
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALT 266
+ HRD K N LLD + K+ DFG +K + H + +GT Y+APE L
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 267 GHLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGR--LRSPYLLALLGY 149
VG G FG V+R G + A+K K + F++E EL+ L SP ++ L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVE-ELVACAGLSSPRIVPLYGA 134
Query: 150 CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ + ++ + GG L G L + L +A +GLE+LH +
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLIKQMGC------LPEDRALYYLGQALEGLEYLH---TR 185
Query: 210 PVIHRDFKSSNILLDKN-FHAKVSDFGLA-KIGSDKAGGHVST--RVLGTQGYVAPEYAL 265
++H D K+ N+LL + A + DFG A + D G + T + GT+ ++APE +
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVP 291
K D++S ++L +L G P
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 93 VGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKME--VELLGRLRSPYLLALLGY 149
VG G FG V+R G + A+K K + F++E V G L SP ++ L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVACAG-LSSPRIVPLYGA 118
Query: 150 CSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
+ + ++ + GG L G L + L +A +GLE+LH +
Sbjct: 119 VREGPWVNIFMELLEGGSLGQLIKQMGC------LPEDRALYYLGQALEGLEYLH---TR 169
Query: 210 PVIHRDFKSSNILLDKN-FHAKVSDFGLA-KIGSDKAGGHVST--RVLGTQGYVAPEYAL 265
++H D K+ N+LL + A + DFG A + D G + T + GT+ ++APE +
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 266 TGHLTTKSDVYSYGVVLLELLTGRVP 291
K D++S ++L +L G P
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 77 FKQLHSATGGFSKSNVVGHGGFGLVYRGVLSNGRKVAIKLM---DQAGKQGEDEFKMEVE 133
FKQL+ T + G +++G G + +K++ D + ++ D F E
Sbjct: 9 FKQLNFLTK-------LNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRD-FNEECP 59
Query: 134 LLGRLRSPYLLALLGYCSDR---RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRL 190
L P +L +LG C L+ + G L L+ G+N V +D +
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLH--EGTNFV---VDQSQAV 114
Query: 191 RIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLDKNFHAKVSDFGLAKIGSDKAGGHVST 250
+ AL+ A+G FLH P + S ++ +D++ A++S +D S
Sbjct: 115 KFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARIS-------XADVKFSFQSP 166
Query: 251 RVLGTQGYVAPEYALTGHLTTK---SDVYSYGVVLLELLTGRVPI 292
+VAPE T +D +S+ V+L EL+T VP
Sbjct: 167 GRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF 211
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 92 VVGHGGFG-LVYRGVLSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
++G+G G +V++G GR VA+K L+D D ME++LL + +
Sbjct: 40 ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFC-----DIALMEIKLLTE-SDDHPNVIRY 92
Query: 149 YCSDR--RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
YCS+ R L + + N LQ+ + N S+ + + + A G+ LH
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 207 CSPPVIHRDFKSSNILLD-------------KNFHAKVSDFGLA-KIGSDKAGGHVS-TR 251
S +IHRD K NIL+ +N +SDFGL K+ S + +
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 252 VLGTQGYVAPEY---ALTGHLTTKSDVYSYGVVLLELLT-GRVPI 292
GT G+ APE + LT D++S G V +L+ G+ P
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R SN VA+K +++ G++ K E+ LR P ++
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVI 84
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L +V +Y + G L E + A + ++ ++ + G+ + H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-------QLISGVSYCH---AM 134
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALT 266
V HRD K N LLD + K+ DFG +K + H + +GT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 267 GHLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 92 VVGHGGFG-LVYRGVLSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
++G+G G +V++G GR VA+K L+D D ME++LL + +
Sbjct: 40 ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFC-----DIALMEIKLLTE-SDDHPNVIRY 92
Query: 149 YCSDR--RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
YCS+ R L + + N LQ+ + N S+ + + + A G+ LH
Sbjct: 93 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 150
Query: 207 CSPPVIHRDFKSSNILLD-------------KNFHAKVSDFGLA-KIGSDKAGGHVS-TR 251
S +IHRD K NIL+ +N +SDFGL K+ S + +
Sbjct: 151 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNN 209
Query: 252 VLGTQGYVAPEY---ALTGHLTTKSDVYSYGVVLLELLT-GRVPI 292
GT G+ APE + LT D++S G V +L+ G+ P
Sbjct: 210 PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 98/230 (42%), Gaps = 40/230 (17%)
Query: 92 VVGHGGFG-LVYRGVLSNGRKVAIK--LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLG 148
++G+G G +V++G GR VA+K L+D D ME++LL + +
Sbjct: 22 ILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFC-----DIALMEIKLLTE-SDDHPNVIRY 74
Query: 149 YCSDR--RKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEH 206
YCS+ R L + + N LQ+ + N S+ + + + A G+ LH
Sbjct: 75 YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH-- 132
Query: 207 CSPPVIHRDFKSSNILLD-------------KNFHAKVSDFGLAKIGSDKAGGHVSTRV- 252
S +IHRD K NIL+ +N +SDFGL K D T +
Sbjct: 133 -SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK-KLDSGQSSFRTNLN 190
Query: 253 --LGTQGYVAPEYALTGH-------LTTKSDVYSYGVVLLELLT-GRVPI 292
GT G+ APE + LT D++S G V +L+ G+ P
Sbjct: 191 NPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 89 KSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRL---RSPYLL 144
+ +V+G G V + L ++ A+K++++ EVE+L + R+ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 145 ALLGYCSDRRKLLVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLH 204
DR LV++ M G + H++ N + + + + + A L+FLH
Sbjct: 77 IEFFEEEDRF-YLVFEKMRGGSILSHIHKRRHFNELEASV-------VVQDVASALDFLH 128
Query: 205 EHCSPPVIHRDFKSSNILLDKNFHA---KVSDFGLAK-IGSDKAGGHVSTRVL----GTQ 256
+ + HRD K NIL + K+ DF L I + +ST L G+
Sbjct: 129 ---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSA 185
Query: 257 GYVAPEY--ALTGHLTT---KSDVYSYGVVLLELLTGRVPI 292
Y+APE A + + + D++S GV+L LL+G P
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 195 EAAKGLEFLHEHCSPPVIHRDFKSSNILLDKN-FHAKVSDFGLA-KIGSDKAGGHVST-- 250
+A +GLE+LH + ++H D K+ N+LL + A + DFG A + D G + T
Sbjct: 172 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 251 RVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVP 291
+ GT+ ++APE + K D++S ++L +L G P
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R SN VA+K +++ G++ ++ K E+ LR P ++
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L +V +Y + G L E + A + ++ ++ + G+ + H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-------QLISGVSYCH---AM 134
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALT 266
V HRD K N LLD + K+ FG +K + H + +GT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKDTVGTPAYIAPEVLLK 190
Query: 267 GHLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHV 248
I + ++FLH H + HRD K N+L +K+ K++DFG AK + A +
Sbjct: 114 IMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---L 167
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGV 302
T T YVAPE D++S GV++ LL G P N +G+ +
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN--TGQAI 218
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 93 VGHGGFGL--VYRGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC 150
+G G FG+ + R SN VA+K +++ G++ ++ K E+ LR P ++
Sbjct: 27 IGSGNFGVARLMRDKQSN-ELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVI 84
Query: 151 SDRRKL-LVYDYMANGGLQEHLYPANGSNSVASKLDWETRLRIALEAAKGLEFLHEHCSP 209
L +V +Y + G L E + A + ++ ++ + G+ + H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ-------QLISGVSYCH---AM 134
Query: 210 PVIHRDFKSSNILLDKN--FHAKVSDFGLAKIGSDKAGGHVSTR-VLGTQGYVAPEYALT 266
V HRD K N LLD + K+ FG +K + H + +GT Y+APE L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK----SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 267 GHLTTK-SDVYSYGVVLLELLTGRVPID 293
K +DV+S GV L +L G P +
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 192 IALEAAKGLEFLHEHCSPPVIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHV 248
I + ++FLH H + HRD K N+L +K+ K++DFG AK + A +
Sbjct: 133 IMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA---L 186
Query: 249 STRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPIDVNKPSGEGV 302
T T YVAPE D++S GV++ LL G P N +G+ +
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN--TGQAI 237
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 99/250 (39%), Gaps = 39/250 (15%)
Query: 69 DNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGV-LSNGRKVAIKLMDQAGKQGEDE 127
D+ + F++K+ F +G G FG V + N + A+K++ K
Sbjct: 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 128 FKMEVELLGRLRSPYLLALLGYCSDRRKLLVYDYMA--NGGLQEHLYPANGSNSVASKLD 185
K+E ++L ++++ + K + YD+M L LY N+
Sbjct: 79 -KIEADILKKIQNDDINNNNI-VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHI 136
Query: 186 WETRLRIALEAAKGLEFLHEHCSPPVIHRDFKSSNILLD--------------------- 224
+ +L +E K L +L + + H D K NILLD
Sbjct: 137 EDIKLY-CIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ 192
Query: 225 ----KNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGV 280
K+ K+ DFG A SD G ++ T+ Y APE L SD++S+G
Sbjct: 193 IYRTKSTGIKLIDFGCATFKSDYHGS-----IINTRQYRAPEVILNLGWDVSSDMWSFGC 247
Query: 281 VLLELLTGRV 290
VL EL TG +
Sbjct: 248 VLAELYTGSL 257
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 211 VIHRDFKSSNILL---DKNFHAKVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTG 267
V+HRD K N+L + N K+ DFG A++ T Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP--PDNQPLKTPCFTLHYAAPELLNQN 184
Query: 268 HLTTKSDVYSYGVVLLELLTGRVPI 292
D++S GV+L +L+G+VP
Sbjct: 185 GYDESCDLWSLGVILYTMLSGQVPF 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,977,879
Number of Sequences: 62578
Number of extensions: 455978
Number of successful extensions: 3345
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 225
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 1118
length of query: 395
length of database: 14,973,337
effective HSP length: 101
effective length of query: 294
effective length of database: 8,652,959
effective search space: 2543969946
effective search space used: 2543969946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)