Query 016119
Match_columns 395
No_of_seqs 241 out of 1174
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:58:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016119.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016119hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 7.2E-26 1.6E-30 224.0 31.1 293 61-378 23-339 (358)
2 PF06027 DUF914: Eukaryotic pr 99.9 1.2E-25 2.6E-30 218.7 28.0 323 44-392 7-332 (334)
3 TIGR00817 tpt Tpt phosphate/ph 99.9 2.5E-25 5.4E-30 216.0 27.5 274 67-369 18-295 (302)
4 PTZ00343 triose or hexose phos 99.9 2.9E-23 6.3E-28 205.6 30.9 281 64-368 62-349 (350)
5 KOG2765 Predicted membrane pro 99.9 3.5E-23 7.5E-28 197.9 20.8 317 44-377 7-400 (416)
6 PF08449 UAA: UAA transporter 99.9 1.9E-21 4E-26 189.1 29.3 296 54-372 3-302 (303)
7 PRK11272 putative DMT superfam 99.9 2.4E-21 5.2E-26 187.3 29.4 280 49-369 6-287 (292)
8 PRK11453 O-acetylserine/cystei 99.9 3.7E-20 8E-25 179.6 29.6 278 55-370 8-290 (299)
9 PRK10532 threonine and homoser 99.9 5.8E-20 1.3E-24 177.8 27.9 274 57-377 18-291 (293)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 5E-20 1.1E-24 174.4 25.5 256 65-362 3-259 (260)
11 PRK15430 putative chlorampheni 99.9 1.6E-19 3.4E-24 175.0 26.7 284 54-376 11-294 (296)
12 KOG2234 Predicted UDP-galactos 99.8 5.4E-19 1.2E-23 169.4 26.4 302 54-372 18-327 (345)
13 PRK11689 aromatic amino acid e 99.8 9.2E-19 2E-23 169.5 25.3 276 55-369 8-289 (295)
14 KOG1441 Glucose-6-phosphate/ph 99.8 3.3E-20 7E-25 178.7 12.1 298 49-374 14-314 (316)
15 KOG3912 Predicted integral mem 99.8 5.5E-19 1.2E-23 163.0 17.2 301 57-366 9-333 (372)
16 KOG1443 Predicted integral mem 99.8 6.6E-18 1.4E-22 157.9 21.8 232 122-365 79-313 (349)
17 TIGR03340 phn_DUF6 phosphonate 99.8 1.8E-16 3.9E-21 152.4 26.3 220 125-364 61-280 (281)
18 PF04142 Nuc_sug_transp: Nucle 99.7 3.2E-16 6.9E-21 147.4 19.8 221 125-357 15-243 (244)
19 COG0697 RhaT Permeases of the 99.7 1.2E-14 2.5E-19 138.6 28.6 211 133-368 76-288 (292)
20 TIGR00776 RhaT RhaT L-rhamnose 99.7 4.2E-15 9.1E-20 143.6 24.4 269 59-368 9-289 (290)
21 TIGR00688 rarD rarD protein. T 99.7 1E-14 2.2E-19 138.2 23.0 251 54-342 5-255 (256)
22 KOG1442 GDP-fucose transporter 99.6 3.3E-15 7.2E-20 137.8 6.3 244 124-382 99-342 (347)
23 KOG1444 Nucleotide-sugar trans 99.5 1.2E-12 2.7E-17 124.2 22.2 287 61-376 22-309 (314)
24 COG2962 RarD Predicted permeas 99.5 3.6E-11 7.8E-16 112.9 26.6 270 65-376 21-292 (293)
25 PF03151 TPT: Triose-phosphate 99.5 1.2E-12 2.5E-17 114.1 14.9 150 218-367 1-153 (153)
26 KOG1583 UDP-N-acetylglucosamin 99.5 4.1E-13 8.8E-18 124.3 12.3 237 122-367 62-314 (330)
27 COG5006 rhtA Threonine/homoser 99.5 1.9E-11 4.1E-16 112.2 22.2 252 70-369 31-284 (292)
28 KOG1580 UDP-galactose transpor 99.5 3.6E-12 7.8E-17 115.6 17.3 226 128-366 86-312 (337)
29 KOG4314 Predicted carbohydrate 99.4 4.2E-12 9E-17 112.3 10.0 222 130-372 56-281 (290)
30 KOG1582 UDP-galactose transpor 99.4 4.5E-11 9.7E-16 110.6 17.0 291 43-370 35-335 (367)
31 KOG4510 Permease of the drug/m 99.3 1.8E-12 3.9E-17 119.5 6.3 211 142-369 112-327 (346)
32 KOG1581 UDP-galactose transpor 99.3 4.9E-10 1.1E-14 105.6 22.5 236 125-371 81-317 (327)
33 KOG2766 Predicted membrane pro 99.2 4.4E-12 9.5E-17 116.3 3.1 282 45-365 13-297 (336)
34 PF13536 EmrE: Multidrug resis 99.1 1E-09 2.2E-14 91.2 9.6 77 125-202 32-109 (113)
35 PF00892 EamA: EamA-like trans 99.0 8.5E-10 1.8E-14 91.8 8.4 121 63-197 3-124 (126)
36 COG5070 VRG4 Nucleotide-sugar 99.0 2.4E-08 5.3E-13 90.2 17.1 219 141-371 82-300 (309)
37 TIGR00803 nst UDP-galactose tr 98.8 3.6E-08 7.9E-13 91.5 11.3 202 152-365 3-222 (222)
38 COG2510 Predicted membrane pro 98.7 4.1E-08 8.8E-13 81.5 8.3 133 54-198 6-138 (140)
39 PF06800 Sugar_transport: Suga 98.7 1.8E-06 3.8E-11 81.9 20.0 113 124-238 42-159 (269)
40 TIGR00950 2A78 Carboxylate/Ami 98.4 7.1E-06 1.5E-10 77.4 14.8 129 52-194 129-259 (260)
41 PF03151 TPT: Triose-phosphate 98.3 9.8E-06 2.1E-10 70.2 13.0 139 56-196 5-150 (153)
42 PRK15051 4-amino-4-deoxy-L-ara 98.3 5.5E-06 1.2E-10 68.5 9.9 62 137-198 47-108 (111)
43 PF00892 EamA: EamA-like trans 98.3 3.9E-06 8.5E-11 69.4 9.2 123 228-367 2-126 (126)
44 PLN00411 nodulin MtN21 family 98.3 1.3E-05 2.9E-10 79.8 14.5 143 48-200 186-329 (358)
45 COG2510 Predicted membrane pro 98.3 6.6E-06 1.4E-10 68.5 9.7 131 219-365 5-137 (140)
46 PRK11272 putative DMT superfam 98.2 5.1E-05 1.1E-09 73.3 15.4 74 125-198 210-284 (292)
47 PF05653 Mg_trans_NIPA: Magnes 98.2 1.6E-05 3.6E-10 77.2 11.4 64 138-201 61-124 (300)
48 PRK10532 threonine and homoser 98.1 6.1E-05 1.3E-09 72.9 14.9 130 52-197 149-279 (293)
49 PRK11689 aromatic amino acid e 98.1 7.1E-05 1.5E-09 72.5 15.2 73 125-197 213-285 (295)
50 PRK13499 rhamnose-proton sympo 98.0 0.0027 5.9E-08 62.6 23.8 110 124-234 70-191 (345)
51 PRK15430 putative chlorampheni 98.0 0.00022 4.8E-09 69.1 15.5 138 214-366 5-144 (296)
52 TIGR03340 phn_DUF6 phosphonate 98.0 3.2E-05 6.8E-10 74.4 9.5 72 125-196 209-280 (281)
53 TIGR00688 rarD rarD protein. T 97.9 0.00038 8.2E-09 65.8 15.4 138 217-366 2-141 (256)
54 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00042 9.2E-09 67.0 14.1 74 125-198 209-287 (290)
55 TIGR00817 tpt Tpt phosphate/ph 97.7 0.00033 7.2E-09 67.9 12.1 143 54-198 148-292 (302)
56 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00033 7.2E-09 59.5 9.3 66 133-198 53-121 (129)
57 KOG2922 Uncharacterized conser 97.7 0.00019 4.1E-09 68.9 8.6 69 134-202 70-139 (335)
58 PTZ00343 triose or hexose phos 97.6 0.0011 2.4E-08 65.9 14.2 64 134-197 283-346 (350)
59 PRK11453 O-acetylserine/cystei 97.6 0.0019 4.2E-08 62.6 14.7 75 124-198 211-286 (299)
60 PF13536 EmrE: Multidrug resis 97.5 0.0021 4.6E-08 53.0 12.1 50 323-372 62-111 (113)
61 PRK10452 multidrug efflux syst 97.4 0.0011 2.3E-08 55.5 8.8 63 136-198 39-102 (120)
62 PRK10650 multidrug efflux syst 97.4 0.0013 2.9E-08 54.0 9.1 61 137-197 45-106 (109)
63 COG0697 RhaT Permeases of the 97.3 0.0073 1.6E-07 57.1 15.0 75 124-198 211-286 (292)
64 COG2076 EmrE Membrane transpor 97.3 0.0017 3.7E-08 52.8 8.2 60 138-197 41-101 (106)
65 PRK09541 emrE multidrug efflux 97.2 0.0023 5E-08 52.8 8.8 61 138-198 41-102 (110)
66 PRK11431 multidrug efflux syst 97.2 0.0026 5.6E-08 52.0 8.9 60 138-197 40-100 (105)
67 COG4975 GlcU Putative glucose 97.2 0.00022 4.8E-09 66.0 2.7 157 61-238 12-173 (288)
68 PF06800 Sugar_transport: Suga 97.1 0.0077 1.7E-07 57.3 12.1 112 57-187 144-255 (269)
69 COG2962 RarD Predicted permeas 96.8 0.054 1.2E-06 51.7 14.7 139 215-367 5-144 (293)
70 PRK10452 multidrug efflux syst 96.7 0.01 2.2E-07 49.7 8.2 40 330-369 66-105 (120)
71 PF08449 UAA: UAA transporter 96.6 0.043 9.2E-07 53.3 13.3 139 52-197 155-295 (303)
72 PF00893 Multi_Drug_Res: Small 96.5 0.0081 1.8E-07 47.9 6.5 54 137-190 39-93 (93)
73 PRK02971 4-amino-4-deoxy-L-ara 96.5 0.013 2.9E-07 49.7 7.9 69 295-367 52-122 (129)
74 PRK09541 emrE multidrug efflux 96.3 0.044 9.6E-07 45.1 9.9 71 296-369 35-105 (110)
75 PF10639 UPF0546: Uncharacteri 96.2 0.014 3E-07 48.2 6.1 59 138-196 52-111 (113)
76 PRK10650 multidrug efflux syst 96.1 0.12 2.6E-06 42.5 11.3 37 330-366 71-107 (109)
77 COG2076 EmrE Membrane transpor 96.1 0.066 1.4E-06 43.6 9.6 71 295-368 34-104 (106)
78 PRK11431 multidrug efflux syst 96.0 0.096 2.1E-06 42.8 10.3 69 296-367 34-102 (105)
79 PF06027 DUF914: Eukaryotic pr 96.0 0.071 1.5E-06 52.6 11.0 129 61-200 178-306 (334)
80 PRK15051 4-amino-4-deoxy-L-ara 95.9 0.04 8.7E-07 45.5 7.7 36 330-365 72-107 (111)
81 PRK13499 rhamnose-proton sympo 95.9 0.13 2.9E-06 50.8 12.5 77 122-199 255-341 (345)
82 COG5006 rhtA Threonine/homoser 95.4 0.078 1.7E-06 49.7 8.2 72 124-195 206-278 (292)
83 TIGR00803 nst UDP-galactose tr 95.2 0.053 1.1E-06 50.1 6.6 58 138-195 163-220 (222)
84 PF05653 Mg_trans_NIPA: Magnes 94.3 0.22 4.8E-06 48.4 8.8 40 330-369 85-124 (300)
85 PF04142 Nuc_sug_transp: Nucle 94.2 0.13 2.7E-06 48.6 6.6 56 318-373 40-95 (244)
86 PF04657 DUF606: Protein of un 94.1 1.2 2.6E-05 38.2 12.0 104 80-196 29-138 (138)
87 COG5070 VRG4 Nucleotide-sugar 93.3 0.9 1.9E-05 42.0 10.0 128 63-198 167-295 (309)
88 PF04657 DUF606: Protein of un 92.5 5.3 0.00012 34.2 13.5 130 218-364 2-138 (138)
89 KOG1441 Glucose-6-phosphate/ph 92.0 0.35 7.5E-06 47.3 6.2 139 52-197 164-305 (316)
90 KOG4510 Permease of the drug/m 92.0 0.056 1.2E-06 51.0 0.6 46 325-370 127-172 (346)
91 PF07857 DUF1632: CEO family ( 91.7 0.78 1.7E-05 43.5 8.0 25 348-372 115-139 (254)
92 KOG2765 Predicted membrane pro 91.4 0.99 2.2E-05 44.7 8.4 140 50-199 246-390 (416)
93 PF06379 RhaT: L-rhamnose-prot 90.7 5.3 0.00011 39.3 12.7 111 125-236 71-192 (344)
94 PF00893 Multi_Drug_Res: Small 90.6 0.68 1.5E-05 36.8 5.5 29 330-358 65-93 (93)
95 COG4975 GlcU Putative glucose 88.7 0.34 7.5E-06 45.3 2.8 74 125-198 207-284 (288)
96 KOG2234 Predicted UDP-galactos 87.5 20 0.00043 35.5 14.1 52 318-369 115-166 (345)
97 COG3238 Uncharacterized protei 86.8 19 0.0004 31.4 12.1 53 215-273 3-55 (150)
98 KOG1583 UDP-N-acetylglucosamin 85.0 5.5 0.00012 38.1 8.6 151 42-198 155-313 (330)
99 KOG1444 Nucleotide-sugar trans 81.9 11 0.00023 36.8 9.4 114 79-198 186-299 (314)
100 PF10639 UPF0546: Uncharacteri 81.2 3.6 7.8E-05 34.0 5.2 38 327-364 74-111 (113)
101 KOG1580 UDP-galactose transpor 79.2 3.3 7.1E-05 38.7 4.7 64 133-196 247-310 (337)
102 KOG1582 UDP-galactose transpor 78.8 28 0.0006 33.4 10.7 115 73-197 213-330 (367)
103 PF06379 RhaT: L-rhamnose-prot 78.8 26 0.00056 34.6 11.0 23 348-370 134-156 (344)
104 KOG1581 UDP-galactose transpor 71.4 29 0.00063 33.7 9.0 56 317-372 105-160 (327)
105 KOG1623 Multitransmembrane pro 69.6 10 0.00022 35.7 5.4 81 156-241 72-152 (243)
106 KOG4831 Unnamed protein [Funct 68.5 6.7 0.00015 31.9 3.5 56 141-196 66-122 (125)
107 KOG1443 Predicted integral mem 68.4 1.2E+02 0.0027 29.6 12.8 76 122-197 238-313 (349)
108 PRK12405 electron transport co 62.7 1.4E+02 0.0029 28.0 13.1 21 253-273 67-87 (231)
109 COG3169 Uncharacterized protei 55.7 19 0.0004 28.9 3.8 33 333-365 81-113 (116)
110 PF04342 DUF486: Protein of un 53.7 63 0.0014 26.3 6.6 33 332-364 73-105 (108)
111 KOG2922 Uncharacterized conser 52.9 4.8 0.0001 39.2 0.2 45 328-372 97-141 (335)
112 PF07857 DUF1632: CEO family ( 52.1 1.7E+02 0.0038 27.7 10.5 117 126-242 54-208 (254)
113 PF05297 Herpes_LMP1: Herpesvi 49.1 5.7 0.00012 38.0 0.0 47 146-192 42-90 (381)
114 PRK02237 hypothetical protein; 49.0 54 0.0012 26.8 5.6 44 157-200 63-106 (109)
115 PF02694 UPF0060: Uncharacteri 48.4 50 0.0011 26.9 5.3 41 160-200 64-104 (107)
116 COG3238 Uncharacterized protei 45.0 2.1E+02 0.0046 24.9 13.0 108 78-197 31-144 (150)
117 COG4657 RnfA Predicted NADH:ub 44.1 2.3E+02 0.005 25.1 10.1 67 167-243 85-158 (193)
118 PF08507 COPI_assoc: COPI asso 42.5 51 0.0011 27.9 4.9 40 352-391 90-135 (136)
119 PF07330 DUF1467: Protein of u 41.8 37 0.0008 26.6 3.5 24 39-62 45-68 (85)
120 KOG4314 Predicted carbohydrate 41.7 10 0.00022 34.5 0.5 47 323-369 81-127 (290)
121 PF15102 TMEM154: TMEM154 prot 41.5 23 0.00049 30.6 2.5 29 354-382 68-96 (146)
122 PRK13108 prolipoprotein diacyl 41.5 34 0.00073 35.4 4.2 28 347-374 254-281 (460)
123 PF04342 DUF486: Protein of un 41.4 34 0.00074 27.8 3.4 30 167-196 76-105 (108)
124 COG1742 Uncharacterized conser 38.4 1.1E+02 0.0023 25.0 5.7 44 157-200 62-105 (109)
125 KOG1442 GDP-fucose transporter 37.4 41 0.0009 32.3 3.8 115 67-187 201-315 (347)
126 PRK02237 hypothetical protein; 35.2 54 0.0012 26.9 3.6 37 333-369 71-107 (109)
127 PF11139 DUF2910: Protein of u 33.0 3.7E+02 0.0081 24.3 11.0 72 125-197 113-209 (214)
128 COG5454 Predicted secreted pro 32.7 78 0.0017 24.5 3.9 35 13-53 25-59 (89)
129 PF02694 UPF0060: Uncharacteri 32.1 53 0.0012 26.8 3.1 37 333-369 69-105 (107)
130 PF06570 DUF1129: Protein of u 29.0 4.4E+02 0.0094 23.8 11.8 14 167-180 189-202 (206)
131 KOG3912 Predicted integral mem 28.6 50 0.0011 31.9 2.8 37 332-368 123-159 (372)
132 PF05915 DUF872: Eukaryotic pr 28.2 1.1E+02 0.0024 25.4 4.4 50 48-100 40-92 (115)
133 COG3169 Uncharacterized protei 27.7 1.3E+02 0.0028 24.2 4.5 30 168-197 84-113 (116)
134 PF15471 TMEM171: Transmembran 26.8 76 0.0016 30.3 3.6 22 350-371 162-183 (319)
135 PF13347 MFS_2: MFS/sugar tran 25.8 5.9E+02 0.013 25.3 10.3 18 173-190 281-298 (428)
136 PRK12437 prolipoprotein diacyl 25.6 70 0.0015 30.5 3.3 26 346-371 234-259 (269)
137 PRK06638 NADH:ubiquinone oxido 25.5 5.1E+02 0.011 23.4 15.1 27 249-275 53-79 (198)
138 PF11023 DUF2614: Protein of u 24.9 63 0.0014 26.6 2.4 23 176-198 5-27 (114)
139 PTZ00101 rhomboid-1 protease; 24.7 6.3E+02 0.014 24.3 13.1 15 123-137 138-152 (278)
140 PF15108 TMEM37: Voltage-depen 24.3 2.2E+02 0.0049 25.0 5.7 54 211-268 116-169 (184)
141 PF11044 TMEMspv1-c74-12: Plec 23.9 85 0.0018 21.3 2.4 8 360-367 21-28 (49)
142 PRK02935 hypothetical protein; 23.8 50 0.0011 26.8 1.6 54 175-229 5-58 (110)
143 TIGR00544 lgt prolipoprotein d 21.4 90 0.0019 30.0 3.1 25 347-371 246-270 (278)
144 KOG4193 G protein-coupled rece 21.3 1.8E+02 0.0039 31.3 5.7 54 123-176 516-569 (610)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=7.2e-26 Score=224.01 Aligned_cols=293 Identities=16% Similarity=0.162 Sum_probs=204.8
Q ss_pred HHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHH
Q 016119 61 CGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAAD 140 (395)
Q Consensus 61 ~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~ 140 (395)
+++....++.|.+++.|.++..+.++|..++..++++..+..+++ ++. ++ ..+|++......|++.+..
T Consensus 23 ~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~-~~~---------~~-~~~~~~~~l~l~g~~g~~~ 91 (358)
T PLN00411 23 TSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRS-RSL---------PP-LSVSILSKIGLLGFLGSMY 91 (358)
T ss_pred HHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHh-ccc---------Cc-chHHHHHHHHHHHHHHHHH
Confidence 455566678899999999999999999998888877643332211 110 11 3456777777778876556
Q ss_pred HHHHHhhccccChhHHHHHHhhhHHHHHHHHHHH------ccccCChhHHHHHHHHHHHHHhheeccCCC----------
Q 016119 141 CFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFF------NKQTFTPYIINSLVLLTISSALLVFQNDSE---------- 204 (395)
Q Consensus 141 ~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~------~kek~t~~~i~si~l~~~Gv~lv~~~~~~~---------- 204 (395)
+.+++.|++|+|++.++++.+++|+|++++++++ +|||++++++.|++++++|+.++..+++..
T Consensus 92 ~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~ 171 (358)
T PLN00411 92 VITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYL 171 (358)
T ss_pred HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccc
Confidence 6789999999999999999999999999999999 699999999999999999998764322210
Q ss_pred -----CcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH-HHHHhhc-h
Q 016119 205 -----NKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILV-GLFVSRE-W 277 (395)
Q Consensus 205 -----~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li-~l~~~~~-~ 277 (395)
.........+..+|++++++|+++||+|.++.++..+| +++....++|.+.++.+.+.+ .+..+++ .
T Consensus 172 ~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~------~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~ 245 (358)
T PLN00411 172 NFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE------YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP 245 (358)
T ss_pred cccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 00000011123679999999999999999998876665 334445666666665544433 2332221 1
Q ss_pred hhhhhhhhhhcchh-HHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHH
Q 016119 278 MGLNREMEAYQLGK-VSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMV 356 (395)
Q Consensus 278 ~~l~~~~~~~~~~~-~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~ 356 (395)
+.. ...+.... ...+..+ .+.+++.+|+.++ ...++..+++...++|+++.++|++++||++++.+++|++
T Consensus 246 ~~~---~~~~~~~~~~i~y~~i-~t~lay~lw~~~v----~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~ 317 (358)
T PLN00411 246 SVW---IIHFDITLITIVTMAI-ITSVYYVIHSWTV----RHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI 317 (358)
T ss_pred ccc---eeccchHHHHHHHHHH-HHHHHHHHHHHHH----hccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 100 00111110 1122222 2444565565543 4567778888899999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccchhhcccc
Q 016119 357 LAIWGFFSFLYQNYLDDYCKSK 378 (395)
Q Consensus 357 lil~G~~~~~~~~~~~~k~~~~ 378 (395)
+++.|+++..+++.||.|.+++
T Consensus 318 LIl~Gv~l~~~~~~~~~~~~~~ 339 (358)
T PLN00411 318 LITLGFYAVMWGKANEEKDQLL 339 (358)
T ss_pred HHHHHHHHHHhhhhhhhhhccc
Confidence 9999999999877776555544
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=1.2e-25 Score=218.68 Aligned_cols=323 Identities=15% Similarity=0.195 Sum_probs=214.6
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCch
Q 016119 44 RNYWRWIRLGIYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSF 123 (395)
Q Consensus 44 ~~~~~~~~~~~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (395)
++|+.|..+...=++.++-.+. .....+.-+.|-|.|.+++........+...+..+.++..++. . + ..
T Consensus 7 ~~~~~~~~~~lgQ~lsl~~~~t-~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~---~------~-~~ 75 (334)
T PF06027_consen 7 FTRRFWIVLLLGQVLSLCITGT-GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKW---L------K-VL 75 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccc---h------h-hc
Confidence 5666666666554444444333 3333333334888899999877655554443333332211110 0 1 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCC
Q 016119 124 FILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDS 203 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~ 203 (395)
++.++.++.++++-...|++.+.|++||+++.++++.++..+|+++++++++|+|+++.++.|+++++.|++++...|..
T Consensus 76 ~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 76 KRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 45667777789988888999999999999999999999999999999999999999999999999999999887665532
Q ss_pred CCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhh
Q 016119 204 ENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNRE 283 (395)
Q Consensus 204 ~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~ 283 (395)
.++++. ...+.+.||+++++||++||++-++.|+..+|. +..++..+.+++++++..+-..+. |++.+.
T Consensus 156 ~~~~~~-~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-------~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~-- 224 (334)
T PF06027_consen 156 SGSDSS-SGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-------PRVEFLGMLGLFGFIISGIQLAIL-ERSGIE-- 224 (334)
T ss_pred ccccCC-CCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-------CHHHHHHHHHHHHHHHHHHHHHhe-ehhhhh--
Confidence 211111 234579999999999999999999988776552 456777888888888776543332 333332
Q ss_pred hhhhcchhHHHHHHHHHHHHH-HHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHH
Q 016119 284 MEAYQLGKVSYVMNLVWTAIC-WQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGF 362 (395)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~i~-~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~ 362 (395)
.+...... ...+++.+++ +..|.+.-. +...+++...++-.....|.+.++++++||+++++..++|.++|+.|+
T Consensus 225 --~~~w~~~~-~~~~v~~~~~lf~~y~l~p~-~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~ 300 (334)
T PF06027_consen 225 --SIHWTSQV-IGLLVGYALCLFLFYSLVPI-VLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGF 300 (334)
T ss_pred --ccCCChhh-HHHHHHHHHHHHHHHHHHHH-HHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHh
Confidence 22111111 1222322332 222222111 234567666666555557889999999999999999999999999999
Q ss_pred HHHHhhccchhhccc--ccCCCCCCCccCCCC
Q 016119 363 FSFLYQNYLDDYCKS--KSNNGEAKQPLQAPS 392 (395)
Q Consensus 363 ~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~ 392 (395)
++|+..+.++.++++ ++++.++++.-++|.
T Consensus 301 vvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (334)
T PF06027_consen 301 VVYNLAESPEEEARRNERKQELEEGQDEDGPD 332 (334)
T ss_pred heEEccCCcccccchhhccccccccccccccc
Confidence 999987765544332 333333333334443
No 3
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.95 E-value=2.5e-25 Score=215.95 Aligned_cols=274 Identities=18% Similarity=0.174 Sum_probs=190.3
Q ss_pred HhhhhheeccCCCccchHhHHHhh-chhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 016119 67 TLLGRQYYDKGGNSNWLATLVQLA-GFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYS 145 (395)
Q Consensus 67 ~ll~r~~~~~g~~~~~~~t~~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~ 145 (395)
.++.|...++ .+.|+..+.++++ +...+.+ ...... ++. ++ ..+|+++..++.|++.+.+..+.|
T Consensus 18 ~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~-~~~~~~--~~~---------~~-~~~~~~~~~~~~g~~~~~~~~~~~ 83 (302)
T TIGR00817 18 NIYNKKLLNV-FPYPYFKTLISLAVGSLYCLL-SWSSGL--PKR---------LK-ISSALLKLLLPVAIVHTIGHVTSN 83 (302)
T ss_pred HHHHHHHHhh-CChhHHHHHHHHHHHHHHHHH-HHHhCC--CCC---------CC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455665543 5667777777764 4444332 211111 110 11 456788889999999888889999
Q ss_pred hhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHHHH
Q 016119 146 IGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTVGA 225 (395)
Q Consensus 146 ~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~A 225 (395)
.|++|+|+++++++.+++|+|+++++++++|||++++++.+++++++|+++.+ ..+ . +.+..|++++++|
T Consensus 84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~-~~~---~------~~~~~G~~~~l~a 153 (302)
T TIGR00817 84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS-DTE---L------SFNWAGFLSAMIS 153 (302)
T ss_pred HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc-CCc---c------cccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998743 211 1 1356799999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhh--cchh-HHHHHHHHHHH
Q 016119 226 SAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAY--QLGK-VSYVMNLVWTA 302 (395)
Q Consensus 226 a~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~--~~~~-~~~~~~l~~~~ 302 (395)
+++|++|.++.++..++ .+ .++++++.|...++.+.+++.....++.+..+.+...+ .... ..+...+....
T Consensus 154 ~~~~a~~~v~~k~~~~~----~~-~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (302)
T TIGR00817 154 NITFVSRNIFSKKAMTI----KS-LDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM 228 (302)
T ss_pred HHHHHHHHHHHHHhhcc----CC-CCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHH
Confidence 99999999888765441 11 25678888988888777766544433222111111111 0010 11111112222
Q ss_pred HHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 303 ICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 303 i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
..+..++.........+++...++...++|++++++|++++||++++.+++|+++++.|+++|...|
T Consensus 229 ~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 229 GFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 2222233211223567899999999999999999999999999999999999999999999987543
No 4
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.93 E-value=2.9e-23 Score=205.57 Aligned_cols=281 Identities=14% Similarity=0.172 Sum_probs=192.0
Q ss_pred hhhHhhhhheeccCCCccchHhHHH-hhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHH
Q 016119 64 AAATLLGRQYYDKGGNSNWLATLVQ-LAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCF 142 (395)
Q Consensus 64 s~~~ll~r~~~~~g~~~~~~~t~~~-~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~ 142 (395)
....+..|...++ .+-|+..+..| ..++.++.+......++.++. + ..++++...++.|++......
T Consensus 62 ~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~----------~-~~~~~~~~llp~gl~~~~~~~ 129 (350)
T PTZ00343 62 VLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRI----------K-SLKLFLKNFLPQGLCHLFVHF 129 (350)
T ss_pred HHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC----------C-CHHHHHHHHHHHHHHHHHHHH
Confidence 4445555766655 44245454444 466665443222211111110 0 134567777888888644455
Q ss_pred HHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHH
Q 016119 143 LYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICT 222 (395)
Q Consensus 143 l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~ 222 (395)
..+.|++++++|.+++++++.|+|+++++++++|||++++++.+++++++|+.+...++ . +.+..|++++
T Consensus 130 ~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~----~------~~~~~G~~~~ 199 (350)
T PTZ00343 130 GAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE----L------HFTWLAFWCA 199 (350)
T ss_pred HHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc----c------hhHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999854221 1 1357899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhh----hhcc-hhHHHHH
Q 016119 223 VGASAGYGFQLSLTQLAFTKVIKR-ETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREME----AYQL-GKVSYVM 296 (395)
Q Consensus 223 L~Aa~~~aly~il~~~~~~k~~~~-~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~----~~~~-~~~~~~~ 296 (395)
++|++++++|.++.++..++.... .. .+..++..++.+++.+++++.....+ ......... .+.. .......
T Consensus 200 l~s~~~~a~~~i~~k~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~lp~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~l~ 277 (350)
T PTZ00343 200 MLSNLGSSLRSIFAKKTMKNKSEIGEN-LTASNIYMLLTLIASLISLPLVLFFE-GKKWVPVWTNYTANMTNYTKGIIIF 277 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccc-CCHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHhhhcccccchHHHHH
Confidence 999999999999998877652100 01 23455556667777777666443221 111111100 1111 0011122
Q ss_pred HHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhh
Q 016119 297 NLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQ 368 (395)
Q Consensus 297 ~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~ 368 (395)
.++.+++.+.+++.........+++...++.+.+++++++++|+++|||++++.+++|.++++.|+++|++.
T Consensus 278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 344566667777754444466889999999999999999999999999999999999999999999999765
No 5
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.91 E-value=3.5e-23 Score=197.87 Aligned_cols=317 Identities=14% Similarity=0.141 Sum_probs=227.9
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhHhhhhheeccCC-CccchHhHHHhhchhHHhhhHhhh-------ccc-CCch---hh
Q 016119 44 RNYWRWIRLGIYALFVICGQAAATLLGRQYYDKGG-NSNWLATLVQLAGFPILLPYYCCI-------NIS-TPFV---QL 111 (395)
Q Consensus 44 ~~~~~~~~~~~~~~~v~~~~s~~~ll~r~~~~~g~-~~~~~~t~~~~~~~~~ll~~~~~~-------~~~-~~~~---~~ 111 (395)
..+.||.++++.+++|.+.|..+.-+.+..|+++. ++|++.||..+..|.++++++.+. .+| +++. ..
T Consensus 7 ~~~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~ 86 (416)
T KOG2765|consen 7 TKRWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIME 86 (416)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhh
Confidence 34556999999999999999999999999998865 789999999999999999976521 111 0000 00
Q ss_pred -------------------------hccc----cCC----------------CC------------CchHHHHHHHHHHH
Q 016119 112 -------------------------QRKI----KIK----------------PP------------NSFFILASVYVGLG 134 (395)
Q Consensus 112 -------------------------~~~~----~~~----------------~~------------~~~~k~~~~~~~~G 134 (395)
..++ ..+ .+ ...++.....+.++
T Consensus 87 e~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc 166 (416)
T KOG2765|consen 87 EADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFC 166 (416)
T ss_pred hhhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHH
Confidence 0000 000 00 01225677777888
Q ss_pred HHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCccccccccc
Q 016119 135 IITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQK 214 (395)
Q Consensus 135 l~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~ 214 (395)
.+|...|+.||.||.|++++..+++.+++-+||..++.++..||+|+.|++++.+.+.|++++..++....++ . ....
T Consensus 167 ~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~-~-~a~~ 244 (416)
T KOG2765|consen 167 PLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD-L-PASR 244 (416)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc-C-Cccc
Confidence 9999999999999999999999999999999999999999999999999999999999999876554322111 1 2235
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH---HHHHHHHHHHHHHHHHhhchhhhhhhhhhhcch-
Q 016119 215 YAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMII---YTAFVASCAILVGLFVSREWMGLNREMEAYQLG- 290 (395)
Q Consensus 215 ~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~---~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~- 290 (395)
..+|+++++++|+.||.|.++.++- ..+++ .-+.++. |.+++..+++.+.+++-+.+. .+.|...
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~----~~~eg--~rvdi~lffGfvGLfnllllwP~l~iL~~~~-----~e~F~lP~ 313 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRK----IGDEG--ERVDIQLFFGFVGLFNLLLLWPPLIILDFFG-----EERFELPS 313 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhh----ccccc--ccccHHHHHHHHHHHHHHHHhHHHHHHHHhc-----cCcccCCC
Confidence 6999999999999999999886532 23331 1233444 444444444444433322111 1233211
Q ss_pred ----hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 291 ----KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 291 ----~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
.......++++.++=.+|..++ ..++++...+..++.+|++.+.++++-|.++++.+++|.+.|++|+++.+
T Consensus 314 ~~q~~~vv~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 314 STQFSLVVFNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred CceeEeeeHhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 1122334566677644555543 25888999999999999999999999999999999999999999999999
Q ss_pred hhccchhhccc
Q 016119 367 YQNYLDDYCKS 377 (395)
Q Consensus 367 ~~~~~~~k~~~ 377 (395)
+....++|+++
T Consensus 390 ~~~~~~~~~~~ 400 (416)
T KOG2765|consen 390 ISSENSKKDPL 400 (416)
T ss_pred ccccccccccc
Confidence 98776665554
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.90 E-value=1.9e-21 Score=189.08 Aligned_cols=296 Identities=18% Similarity=0.174 Sum_probs=207.9
Q ss_pred HHHHHHHHHHhhhHhhhhheeccCCC--ccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDKGGN--SNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYV 131 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~g~~--~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 131 (395)
++...+..+.+..+++......+.+. .+++.+..|.+...+...+.....++ ++ ..++-+..++
T Consensus 3 ~~~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~ 68 (303)
T PF08449_consen 3 ICVAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-PK-------------SRKIPLKKYA 68 (303)
T ss_pred eeHHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-cC-------------CCcChHHHHH
Confidence 34566677777778877555555443 48889998887666654433332210 11 0112244455
Q ss_pred HHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccc
Q 016119 132 GLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLS 211 (395)
Q Consensus 132 ~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~ 211 (395)
+.+++..+.+.+-|.|++|+|.++.++++++.|+++++++++++|||++++++.++++.++|+++.+.++..++......
T Consensus 69 ~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~ 148 (303)
T PF08449_consen 69 ILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSS 148 (303)
T ss_pred HHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccc
Confidence 56777778888999999999999999999999999999999999999999999999999999998766654332211101
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHH--hhchhhhhhhhhhhcc
Q 016119 212 KQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFV--SREWMGLNREMEAYQL 289 (395)
Q Consensus 212 ~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~--~~~~~~l~~~~~~~~~ 289 (395)
......|+++.+.|.++.|++...+|+.++++. .++.++++|.++++.+..++.... .+++... ..+..
T Consensus 149 ~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~-----~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~----~~f~~ 219 (303)
T PF08449_consen 149 SFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG-----KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA----IRFIS 219 (303)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH----HHHHH
Confidence 112345999999999999999999999887741 356889999999988877665555 4433211 11111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 290 GKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 290 ~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
.....+..+..+.+...+........+...+++..+++.+++.++++++++++||+++++.+|+|.++++.|..+|.+.+
T Consensus 220 ~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~ 299 (303)
T PF08449_consen 220 AHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK 299 (303)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence 11111111222222111111112223567899999999999999999999999999999999999999999999999887
Q ss_pred cch
Q 016119 370 YLD 372 (395)
Q Consensus 370 ~~~ 372 (395)
+|+
T Consensus 300 ~k~ 302 (303)
T PF08449_consen 300 KKK 302 (303)
T ss_pred ccC
Confidence 664
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.90 E-value=2.4e-21 Score=187.29 Aligned_cols=280 Identities=11% Similarity=0.004 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHH
Q 016119 49 WIRLGIYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILAS 128 (395)
Q Consensus 49 ~~~~~~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 128 (395)
-.-.....+.+.+.++.+.+..|...+ +-++.++.++|...+..++++.... ++ ++. .++|++.
T Consensus 6 ~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~-~~--~~~------------~~~~~~~ 69 (292)
T PRK11272 6 LLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLL-RG--HPL------------PTLRQWL 69 (292)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH-hC--CCC------------CcHHHHH
Confidence 344556678888889999999998766 6788999999999888887664332 11 111 1235566
Q ss_pred HHHHHHHHH-HHHHHHHHhhc-cccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCc
Q 016119 129 VYVGLGIIT-AADCFLYSIGL-RYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENK 206 (395)
Q Consensus 129 ~~~~~Gl~~-~~~~~l~~~sl-~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~ 206 (395)
.....|++. +....+++.+. +++|++.++++.+++|+|+++++++ +|||++++++.+++++++|+.++..++ + .
T Consensus 70 ~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~-~--~ 145 (292)
T PRK11272 70 NAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGG-N--L 145 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCc-c--c
Confidence 666677764 45567888898 9999999999999999999999986 699999999999999999998863221 1 1
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhh
Q 016119 207 KGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEA 286 (395)
Q Consensus 207 ~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~ 286 (395)
+....|++++++|+++||+|.+..++.. ++ +......|...++.+.+.+.....++......+.+.
T Consensus 146 ------~~~~~G~l~~l~a~~~~a~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (292)
T PRK11272 146 ------SGNPWGAILILIASASWAFGSVWSSRLP----LP----VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSG 211 (292)
T ss_pred ------ccchHHHHHHHHHHHHHHHHHHHHHhcC----CC----cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHH
Confidence 1246799999999999999988765431 11 123344555555554443322222211000000011
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 287 YQLGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 287 ~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
.....+..++.+++.+..|..+. .+.++...++...++|+.+.+++++++||++++.+++|+++++.|+++..
T Consensus 212 ---~~~i~~l~i~~s~~~~~l~~~~~----~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 212 ---FLALGYLAVFGSIIAISAYMYLL----RNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 11233445556666776666554 35667778888999999999999999999999999999999999998876
Q ss_pred hhc
Q 016119 367 YQN 369 (395)
Q Consensus 367 ~~~ 369 (395)
..+
T Consensus 285 ~~~ 287 (292)
T PRK11272 285 LGK 287 (292)
T ss_pred HHH
Confidence 543
No 8
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.88 E-value=3.7e-20 Score=179.61 Aligned_cols=278 Identities=14% Similarity=0.193 Sum_probs=185.2
Q ss_pred HHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHH
Q 016119 55 YALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLG 134 (395)
Q Consensus 55 ~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~G 134 (395)
..++..+.+..+.++.|...+ +.++.++.++|...+...+++ +. . + +|. + ++. ....|
T Consensus 8 ~~l~~~~~Wg~~~~~~k~~~~-~~~p~~~~~~R~~~a~~~l~~-~~-~-~--~~~----------~---~~~---~~~~g 65 (299)
T PRK11453 8 LALLVVVVWGLNFVVIKVGLH-NMPPLMLAGLRFMLVAFPAIF-FV-A-R--PKV----------P---LNL---LLGYG 65 (299)
T ss_pred HHHHHHHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHH-Hh-c-C--CCC----------c---hHH---HHHHH
Confidence 355667778888889998765 578899999998876554433 21 1 1 111 1 121 22234
Q ss_pred HHH-HHHHHHHHhhccc-cChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCccccccc
Q 016119 135 IIT-AADCFLYSIGLRY-LPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSK 212 (395)
Q Consensus 135 l~~-~~~~~l~~~sl~~-~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~ 212 (395)
++. ..+..+++.+++| .|++.++++.+++|+|+.+++++++|||++++++.++++.++|+.++..++.++ .
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~-------~ 138 (299)
T PRK11453 66 LTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG-------Q 138 (299)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC-------c
Confidence 432 3444577789988 699999999999999999999999999999999999999999998864321111 1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH-HHHhhchhhhhhhhhhhcch-
Q 016119 213 QKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVG-LFVSREWMGLNREMEAYQLG- 290 (395)
Q Consensus 213 ~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~-l~~~~~~~~l~~~~~~~~~~- 290 (395)
..+..|++++++|+++|++|.++.++..++. . ......++.+.+.++.+..... ...+++ .........+...
T Consensus 139 ~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 213 (299)
T PRK11453 139 HVAMLGFMLTLAAAFSWACGNIFNKKIMSHS---T-RPAVMSLVVWSALIPIIPFFVASLILDGS-ATMIHSLVTIDMTT 213 (299)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhccc---C-ccchhHHHHHHHHHHHHHHHHHHHHhcCc-hhhhhhhccCCHHH
Confidence 1245799999999999999999988754431 1 1123444555555544333221 122221 1110000011111
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 291 -KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 291 -~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
....++.++.+++.+.+|+.++. ..++...+.+..++|+++.+++++++||+++..+++|+++++.|+++..+.+
T Consensus 214 ~~~l~~l~i~~t~~~~~l~~~~l~----~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 214 ILSLMYLAFVATIVGYGIWGTLLG----RYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 11234455666677777665542 3455567778889999999999999999999999999999999999877655
Q ss_pred c
Q 016119 370 Y 370 (395)
Q Consensus 370 ~ 370 (395)
+
T Consensus 290 ~ 290 (299)
T PRK11453 290 R 290 (299)
T ss_pred h
Confidence 3
No 9
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.87 E-value=5.8e-20 Score=177.75 Aligned_cols=274 Identities=11% Similarity=0.061 Sum_probs=185.0
Q ss_pred HHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHH
Q 016119 57 LFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGII 136 (395)
Q Consensus 57 ~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~ 136 (395)
++-.++.+.+..+.|+.+++ .+...+..+|...+.+++++.. . +++ ++ ..+|++......|+.
T Consensus 18 ~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~-~-~~~-~~-------------~~~~~~~~~~~~g~~ 80 (293)
T PRK10532 18 LIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIF-K-PWR-LR-------------FAKEQRLPLLFYGVS 80 (293)
T ss_pred HHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHH-h-HHh-cc-------------CCHHHHHHHHHHHHH
Confidence 33334444556678988775 7778899999999888776532 1 111 01 123455555566777
Q ss_pred HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccch
Q 016119 137 TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYA 216 (395)
Q Consensus 137 ~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~ 216 (395)
.+..+.+++++++|+|++.++++..++|+|+++++. |++++. .++.++++|+.++...+ .+ . .+.+.
T Consensus 81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~-~~-~-----~~~~~ 147 (293)
T PRK10532 81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLG-QD-V-----SHVDL 147 (293)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecC-CC-c-----ccCCh
Confidence 777788999999999999999999999999998873 555544 45667789987753221 11 1 11346
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHH
Q 016119 217 IGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVM 296 (395)
Q Consensus 217 ~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (395)
.|++++++|+++||+|.++.++..++ . ++..+ .+...++.+.+.+....... ....+...+ ....++
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~~~~----~---~~~~~-~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~---~~~l~l 214 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRAGAE----H---GPATV-AIGSLIAALIFVPIGALQAG--EALWHWSIL---PLGLAV 214 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc----C---CchHH-HHHHHHHHHHHHHHHHHccC--cccCCHHHH---HHHHHH
Confidence 79999999999999999988765433 1 23333 34445555444433222211 000010110 012345
Q ss_pred HHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccchhhcc
Q 016119 297 NLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLDDYCK 376 (395)
Q Consensus 297 ~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~~k~~ 376 (395)
.++.+++.+.+++.+. .+.++...++...++|+++.++|++++||++++.+++|+++++.|.+.+.+.+.++.|-|
T Consensus 215 gv~~t~~~~~l~~~~~----~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~ 290 (293)
T PRK10532 215 AILSTALPYSLEMIAL----TRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIK 290 (293)
T ss_pred HHHHHHHHHHHHHHHH----HhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 6667777777766554 356777889999999999999999999999999999999999999999987765555544
Q ss_pred c
Q 016119 377 S 377 (395)
Q Consensus 377 ~ 377 (395)
|
T Consensus 291 ~ 291 (293)
T PRK10532 291 E 291 (293)
T ss_pred C
Confidence 4
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.87 E-value=5e-20 Score=174.37 Aligned_cols=256 Identities=13% Similarity=0.136 Sum_probs=176.4
Q ss_pred hhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHH-HHHHHHH
Q 016119 65 AATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGII-TAADCFL 143 (395)
Q Consensus 65 ~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~-~~~~~~l 143 (395)
.+.+..|...+++.+.......+..++..++.+ +...+ ++ ++.+......|.+ .+.++.+
T Consensus 3 ~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~-~~~~~---~~---------------~~~~~~~~~~~~~~~~l~~~~ 63 (260)
T TIGR00950 3 TTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLP-LLRRR---PP---------------LKRLLRLLLLGALQIGVFYVL 63 (260)
T ss_pred chHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHhc---cC---------------HhHHHHHHHHHHHHHHHHHHH
Confidence 456677887776666666666666566666554 32211 11 1122233334444 4788889
Q ss_pred HHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHH
Q 016119 144 YSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTV 223 (395)
Q Consensus 144 ~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L 223 (395)
++.|++|+|++.++++.+++|+|+++++++++|||++++++.+++++++|+.++..++ +. +.+..|+++++
T Consensus 64 ~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~-~~--------~~~~~G~~~~l 134 (260)
T TIGR00950 64 YFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDG-NL--------SINPAGLLLGL 134 (260)
T ss_pred HHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCC-cc--------cccHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998864221 11 13578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHHHHHHHHH
Q 016119 224 GASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVMNLVWTAI 303 (395)
Q Consensus 224 ~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~i 303 (395)
.|+++|+.|.++.++..++. + .+...+..+.+.++.+.+++.....++.... + ........+..++.+.+
T Consensus 135 ~a~~~~a~~~~~~k~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 135 GSGISFALGTVLYKRLVKKE----G-PELLQFTGWVLLLGALLLLPFAWFLGPNPQA--L---SLQWGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHHhHHhhcC----C-chHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--c---hHHHHHHHHHHHHHHHH
Confidence 99999999998877655431 1 1223333355666666555443333221110 0 00000122334445556
Q ss_pred HHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHH
Q 016119 304 CWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGF 362 (395)
Q Consensus 304 ~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~ 362 (395)
.+..+..+. ++.++...+++..++|+++.+++++++||+++..+++|.++++.|+
T Consensus 205 ~~~~~~~a~----~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGL----TLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHH----hcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 666665543 4577778889999999999999999999999999999999999886
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.86 E-value=1.6e-19 Score=174.97 Aligned_cols=284 Identities=11% Similarity=0.062 Sum_probs=182.2
Q ss_pred HHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGL 133 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 133 (395)
...++..+.++...+..|.. .+.++..+.++|..++.+++++.....+++ +.. ..+ . .+++.+......
T Consensus 11 ~~~l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~-~~~-~~~---~----~~~~~~~~~~~~ 79 (296)
T PRK15430 11 LLALAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSICRQW-SYL-KTL---I----QTPQKIFMLAVS 79 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHHccH-HHH-HHH---H----cCHHHHHHHHHH
Confidence 34444555667777888875 346778889999999888776544332111 110 000 0 112443333333
Q ss_pred HHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccc
Q 016119 134 GIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQ 213 (395)
Q Consensus 134 Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~ 213 (395)
++..+..+.+|++|++++|++.++++.++.|+|+++++++++|||++++++.++++.++|++++..+ ++
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~-~~---------- 148 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWT-FG---------- 148 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH-cC----------
Confidence 4445778899999999999999999999999999999999999999999999999999999886322 10
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHH
Q 016119 214 KYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVS 293 (395)
Q Consensus 214 ~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~ 293 (395)
+. .+++++|+++||+|.++.++.. ++. .........|..+++.+.... ........... ..+... ..
T Consensus 149 ~~---~~~~l~aa~~~a~~~i~~r~~~----~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~-~~ 215 (296)
T PRK15430 149 SL---PIIALGLAFSFAFYGLVRKKIA----VEA-QTGMLIETMWLLPVAAIYLFA--IADSSTSHMGQ--NPMSLN-LL 215 (296)
T ss_pred Cc---cHHHHHHHHHHHHHHHHHHhcC----CCC-chhHHHHHHHHHHHHHHHHHH--HccCCcccccC--CcHHHH-HH
Confidence 01 1468889999999988765431 111 112233333444443322111 11111000000 000000 11
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccchh
Q 016119 294 YVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLDD 373 (395)
Q Consensus 294 ~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~~ 373 (395)
.+...+.+.+.+.+++.+. .+.++...+....++|+++.++|++++||++++.+++|+++++.|+.+...+.-...
T Consensus 216 ~~~~g~~t~i~~~~~~~a~----~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~~ 291 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAA----TRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYTQ 291 (296)
T ss_pred HHHHHHHHHHHHHHHHHHH----hcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111224445555666543 356777888999999999999999999999999999999999999988877665444
Q ss_pred hcc
Q 016119 374 YCK 376 (395)
Q Consensus 374 k~~ 376 (395)
||+
T Consensus 292 ~~~ 294 (296)
T PRK15430 292 RRK 294 (296)
T ss_pred hhc
Confidence 433
No 12
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=5.4e-19 Score=169.41 Aligned_cols=302 Identities=16% Similarity=0.110 Sum_probs=208.3
Q ss_pred HHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccC----Cchh--hhccccCCCCCchHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINIST----PFVQ--LQRKIKIKPPNSFFILA 127 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~k~~ 127 (395)
+.++.+.+-.++.+++.|+..+.++.++.-.|.+...+...+.+.++...++. ++.. ..+++.. ..++..
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~----~~~~~l 93 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILA----APRETL 93 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHh----ChHHHH
Confidence 34455556677788888999888877777777777788888776655433221 1110 1111111 123567
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcc
Q 016119 128 SVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKK 207 (395)
Q Consensus 128 ~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~ 207 (395)
+..+|..+. +.+|.+++.++.+++++++++..++....|+++++++++||+++++|.++++.++|+.++..+..+..+.
T Consensus 94 k~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 94 KVSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 777776654 6666699999999999999999999999999999999999999999999999999999986333221111
Q ss_pred c-ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhh
Q 016119 208 G-VLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEA 286 (395)
Q Consensus 208 ~-~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~ 286 (395)
. ....++.+.|....+.++++.|+--++.|+.+|. ... ..+-.-..+++++.++.+.+.... |++... +.+
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~----s~~-s~wi~NiqL~~~g~~f~~l~~~~~-d~~~i~--~~g 244 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG----SNV-SLWIRNIQLYFFGILFNLLTILLQ-DGEAIN--EYG 244 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc----CCc-hHHHHHHHHHHHHHHHHHHHHhhc-cccccc--cCC
Confidence 1 1134567999999999999999987666655544 221 222222334556666666555544 444433 122
Q ss_pred hcch-hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 287 YQLG-KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 287 ~~~~-~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
+..| ....|+.++.+++.- +-+.-++++.++.......++.+.++.+.++.+|+-++|....+|..+++..+.+|
T Consensus 245 ff~G~s~~vw~vVl~~a~gG----Llvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 245 FFYGYSSIVWLVVLLNAVGG----LLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLY 320 (345)
T ss_pred ccccccHHHHHHHHHHhccc----hhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHh
Confidence 2222 122333333333332 22223578999999999999999999999999999999999999999999999999
Q ss_pred Hhhccch
Q 016119 366 LYQNYLD 372 (395)
Q Consensus 366 ~~~~~~~ 372 (395)
...+++|
T Consensus 321 ~~~P~~~ 327 (345)
T KOG2234|consen 321 SLYPARD 327 (345)
T ss_pred hcCCccc
Confidence 9777776
No 13
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.84 E-value=9.2e-19 Score=169.54 Aligned_cols=276 Identities=10% Similarity=0.030 Sum_probs=177.6
Q ss_pred HHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHH
Q 016119 55 YALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLG 134 (395)
Q Consensus 55 ~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~G 134 (395)
+.++..+.+..+-+..|...+ +.++.++..+|...+.+++++. . ++++.++ ..++.. ...+
T Consensus 8 ~~l~a~~~Wg~~~~~~k~~~~-~~~P~~~~~~R~~~a~l~l~~~-~--~~~~~~~------------~~~~~~---~~~~ 68 (295)
T PRK11689 8 IGLIAILLWSTMVGLIRGVSE-SLGPVGGAAMIYSVSGLLLLLT-V--GFPRLRQ------------FPKRYL---LAGG 68 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-cCChHHHHHHHHHHHHHHHHHH-c--ccccccc------------ccHHHH---HHHh
Confidence 355666777888888897543 4788888999988887776542 1 1111110 112222 2223
Q ss_pred HHHHHHHHHHHhhcc----ccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccc-
Q 016119 135 IITAADCFLYSIGLR----YLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGV- 209 (395)
Q Consensus 135 l~~~~~~~l~~~sl~----~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~- 209 (395)
+..+.+..+++.+++ .++++.++++.+++|+|+.+++++++|||++++++.+++++++|++++..++.+.+..+.
T Consensus 69 l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 148 (295)
T PRK11689 69 LLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELI 148 (295)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhh
Confidence 334566666666665 468888999999999999999999999999999999999999999886433211100000
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcc
Q 016119 210 LSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQL 289 (395)
Q Consensus 210 ~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~ 289 (395)
....+...|++++++|+++||+|.++.++..++ + ++..... ..+.+.+.+.....++. .. .+..
T Consensus 149 ~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~------~-~~~~~~~---~~~~~~l~~~~~~~~~~-~~-----~~~~ 212 (295)
T PRK11689 149 NNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG------K-NGITLFF---ILTALALWIKYFLSPQP-AM-----VFSL 212 (295)
T ss_pred hccccChHHHHHHHHHHHHHHHHHHHHhhccCC------C-CchhHHH---HHHHHHHHHHHHHhcCc-cc-----cCCH
Confidence 001124579999999999999999988765332 1 2333221 12222222222222211 10 1111
Q ss_pred hhHHHHH-HHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhh
Q 016119 290 GKVSYVM-NLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQ 368 (395)
Q Consensus 290 ~~~~~~~-~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~ 368 (395)
..+.+.. ..+.+++++.+|+.++ ++.++...+....++|+++.+++++++||+++..+++|+++++.|+++....
T Consensus 213 ~~~~~l~~~~~~t~~~~~l~~~al----~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 213 PAIIKLLLAAAAMGFGYAAWNVGI----LHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 1111111 1123555566666554 3567778899999999999999999999999999999999999999887643
Q ss_pred c
Q 016119 369 N 369 (395)
Q Consensus 369 ~ 369 (395)
+
T Consensus 289 ~ 289 (295)
T PRK11689 289 T 289 (295)
T ss_pred H
Confidence 3
No 14
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.83 E-value=3.3e-20 Score=178.73 Aligned_cols=298 Identities=17% Similarity=0.180 Sum_probs=210.7
Q ss_pred HHHHHHHHHHHHHHHhhhHhhh-hheecc-CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHH
Q 016119 49 WIRLGIYALFVICGQAAATLLG-RQYYDK-GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFIL 126 (395)
Q Consensus 49 ~~~~~~~~~~v~~~~s~~~ll~-r~~~~~-g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 126 (395)
+.+...-...++...+...++. |...+. |++-|+..|..+.+...+........+.++++. . ..+..
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~----------~-~~~~~ 82 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSK----------I-SSKLP 82 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCc----------c-ccccc
Confidence 3444444455555555555544 444443 778888888886644433332222212111111 0 12234
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCc
Q 016119 127 ASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENK 206 (395)
Q Consensus 127 ~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~ 206 (395)
+...+++|++.+...++-|.|+.|.|+|++++++++.|+|+.++++++.+|+.++..+.+++....|+.+-...+
T Consensus 83 ~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e----- 157 (316)
T KOG1441|consen 83 LRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE----- 157 (316)
T ss_pred hHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-----
Confidence 566678888888888999999999999999999999999999999999999999999999999999998743321
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH-HHHHHhhchhhhhhhhh
Q 016119 207 KGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAIL-VGLFVSREWMGLNREME 285 (395)
Q Consensus 207 ~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~l-i~l~~~~~~~~l~~~~~ 285 (395)
.+.+..|++.++.|.+.++++.++.++.+++ ++++ .+.++...|+++++.+.++ +................
T Consensus 158 -----~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~--~~~~-~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~ 229 (316)
T KOG1441|consen 158 -----LSFNLFGFISAMISNLAFALRNILSKKLLTS--KGES-LNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA 229 (316)
T ss_pred -----ccccHHHHHHHHHHHHHHHHHHHHHHHhhhc--cccc-cCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc
Confidence 2358999999999999999999999988764 2333 4788999999998887776 32222111000000001
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 286 AYQLGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 286 ~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
.|.. .++..+... +....+++...-+...+++++.++.+.++..++++.++++|+|++++.+.+|+++.+.|+..|
T Consensus 230 ~~~~---~~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 230 PWFV---TFLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred ccch---hhHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 1221 222222233 555556666666777899999999999999999999999999999999999999999999999
Q ss_pred Hhhccchhh
Q 016119 366 LYQNYLDDY 374 (395)
Q Consensus 366 ~~~~~~~~k 374 (395)
++.|.++++
T Consensus 306 ~~~k~~~~~ 314 (316)
T KOG1441|consen 306 SRAKLKEKK 314 (316)
T ss_pred HHHhhhhhc
Confidence 877765543
No 15
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.82 E-value=5.5e-19 Score=163.03 Aligned_cols=301 Identities=15% Similarity=0.158 Sum_probs=215.5
Q ss_pred HHHHHHHhhhHhhhhheecc------CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhh---ccccC--CCCCchHH
Q 016119 57 LFVICGQAAATLLGRQYYDK------GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQ---RKIKI--KPPNSFFI 125 (395)
Q Consensus 57 ~~v~~~~s~~~ll~r~~~~~------g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~k 125 (395)
++++..++..+++.|.+.+. |.++|++++..++.|...++..|.+.+++..++..+ +++.+ .+| ...+
T Consensus 9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~p-f~p~ 87 (372)
T KOG3912|consen 9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSP-FNPV 87 (372)
T ss_pred hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCC-CCcc
Confidence 45667779999999987553 468999999999988877666565544432111110 11111 123 3335
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCC
Q 016119 126 LASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSEN 205 (395)
Q Consensus 126 ~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~ 205 (395)
.++...++.+ +++. +.|.++.++++|.+++++..-.+||.+|+.-+++++++.++|.|+....+|.++++..|-...
T Consensus 88 lfl~Pal~Di--~gss-lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~ 164 (372)
T KOG3912|consen 88 LFLPPALCDI--AGSS-LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV 164 (372)
T ss_pred eecChHHHHH--hhhH-HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence 5566666776 3444 555999999999999999999999999999999999999999999999999998876542211
Q ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH-HHH----Hhh-chhh
Q 016119 206 KKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILV-GLF----VSR-EWMG 279 (395)
Q Consensus 206 ~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li-~l~----~~~-~~~~ 279 (395)
++.....+..+.|+++.+.|.+.-|+.+++.|+..+|. -.+|++...|.+++|.+.+.+ .+. ..+ .++.
T Consensus 165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~-----nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~ 239 (372)
T KOG3912|consen 165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS-----NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC 239 (372)
T ss_pred cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc-----cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence 11110123468999999999999999999999887773 247888889999888544322 111 111 1111
Q ss_pred hhhh-h----hhhc--chhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHH
Q 016119 280 LNRE-M----EAYQ--LGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKV 352 (395)
Q Consensus 280 l~~~-~----~~~~--~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~ 352 (395)
-++. . +.|. .......+++.++.++...+|..-..+.++.|+....++..++..+.++++....+|.+...|+
T Consensus 240 ~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqi 319 (372)
T KOG3912|consen 240 NPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQI 319 (372)
T ss_pred CCCcchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHH
Confidence 1110 0 1111 1123445666677776666666555678889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 016119 353 IAMVLAIWGFFSFL 366 (395)
Q Consensus 353 iG~~lil~G~~~~~ 366 (395)
.|+++.+.|+++|+
T Consensus 320 lGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 320 LGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999998
No 16
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.80 E-value=6.6e-18 Score=157.91 Aligned_cols=232 Identities=20% Similarity=0.256 Sum_probs=172.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheecc
Q 016119 122 SFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQN 201 (395)
Q Consensus 122 ~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~ 201 (395)
.++..+....++|+..+.|..+.|+|++|+|+|.||+.+++.++|+.+|+.+|.-||+++.-...+.+...|+++....+
T Consensus 79 sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 79 SWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred cHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 44556667779999999999999999999999999999999999999999999999999999999999999988854331
Q ss_pred CCCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHH-HHHHhhchhhh
Q 016119 202 DSENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILV-GLFVSREWMGL 280 (395)
Q Consensus 202 ~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li-~l~~~~~~~~l 280 (395)
.+.++.|+.+.++|+++.|+.+.+.|...+|. +...++|+.+....++...+.+++ ++.++|.....
T Consensus 159 ----------Tqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~--~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~ 226 (349)
T KOG1443|consen 159 ----------TQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQ--PSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLIT 226 (349)
T ss_pred ----------cceeehhHHHHHHHHHhhhhhHHHHHHHHhcC--ccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccch
Confidence 23579999999999999999999999999884 222357888888888775544443 55666642221
Q ss_pred hhh-hhhhcchhHHHHHHHHH-HHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHH
Q 016119 281 NRE-MEAYQLGKVSYVMNLVW-TAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLA 358 (395)
Q Consensus 281 ~~~-~~~~~~~~~~~~~~l~~-~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~li 358 (395)
..+ ...+..+.....+..+. -+..-.+......-+...++.++.++.+-++.....++|.++.+|.++..+|+|..++
T Consensus 227 ~s~~f~~~d~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~ 306 (349)
T KOG1443|consen 227 SSSIFRFQDTGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAIC 306 (349)
T ss_pred hhhHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHH
Confidence 111 11111221111111111 1111111122223345678888899999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 016119 359 IWGFFSF 365 (395)
Q Consensus 359 l~G~~~~ 365 (395)
+.|+..+
T Consensus 307 ~agi~~~ 313 (349)
T KOG1443|consen 307 LAGILLH 313 (349)
T ss_pred HHHHHHh
Confidence 9999998
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.77 E-value=1.8e-16 Score=152.40 Aligned_cols=220 Identities=10% Similarity=0.048 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCC
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSE 204 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~ 204 (395)
+.+...+..|+.......+++.++++.|++.++.+.+++|+++++++++++|||++++++.|+.+.+.|+.++..++. .
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~-~ 139 (281)
T TIGR03340 61 TFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRF-A 139 (281)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccc-c
Confidence 344444555555677788999999999999999999999999999999999999999999999999999988643221 1
Q ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhh
Q 016119 205 NKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREM 284 (395)
Q Consensus 205 ~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~ 284 (395)
..+..|+.++++++++|++|.++.++..++. ++. ......+.+........+.......++ .....
T Consensus 140 --------~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-- 205 (281)
T TIGR03340 140 --------QHRRKAYAWALAAALGTAIYSLSDKAAALGV-PAF--YSALGYLGIGFLAMGWPFLLLYLKRHG-RSMFP-- 205 (281)
T ss_pred --------ccchhHHHHHHHHHHHHHHhhhhccccccch-hcc--cccHHHHHHHHHHHHHHHHHHHHHHhc-cchhh--
Confidence 1234688899999999999988765432211 000 111111122221111111111111111 10000
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 016119 285 EAYQLGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFS 364 (395)
Q Consensus 285 ~~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~ 364 (395)
..... ....+...+.+++.+..+..+.. ..++...+....++|+++.+++++++||+++..+++|+++++.|+++
T Consensus 206 ~~~~~-~~~~~~~~~~s~l~~~l~~~al~----~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 206 YARQI-LPSATLGGLMIGGAYALVLWAMT----RLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hHHHH-HHHHHHHHHHHHHHHHHHHHHHh----hCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 00000 01123344455566666655443 23333445556677889999999999999999999999999999875
No 18
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.73 E-value=3.2e-16 Score=147.43 Aligned_cols=221 Identities=15% Similarity=0.167 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCC
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSE 204 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~ 204 (395)
|+.+.+..=+++++..|.+.+.+++++++++++++.++..++|++++++++|||+++++|.|+++.++|++++..++...
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 44444444466677888888899999999999999999999999999999999999999999999999999876544322
Q ss_pred C---cccc----cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhch
Q 016119 205 N---KKGV----LSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREW 277 (395)
Q Consensus 205 ~---~~~~----~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~ 277 (395)
. +++. ........|+++.+.++++.|+-.+..|+.+|+. + .+......+.++++.+..++..... ++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~--~---~s~~~~N~qL~~~gi~~~~~~~~~~-~~ 168 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS--N---VSLWIQNMQLYLFGILFNLLALLLS-DG 168 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc--c---hhHHHHHHHHHHHHHHHHHHHHhcc-cc
Confidence 1 0000 0123468999999999999999999988887762 2 2333334444555555554443332 23
Q ss_pred hhhhhhhhhhcchh-HHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHH
Q 016119 278 MGLNREMEAYQLGK-VSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMV 356 (395)
Q Consensus 278 ~~l~~~~~~~~~~~-~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~ 356 (395)
..+.+ +.+..|. ...|..++..++. ++.+..+.++.++...++...+...++.++++++|+.+++....+|..
T Consensus 169 ~~~~~--~g~f~G~~~~~~~~i~~~a~g----Gllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~ 242 (244)
T PF04142_consen 169 SAISE--SGFFHGYSWWVWIVIFLQAIG----GLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA 242 (244)
T ss_pred ccccc--CCchhhcchHHHHHHHHHHHh----hHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence 32221 1222221 1222333333332 233334578999999999999999999999999999999999999876
Q ss_pred H
Q 016119 357 L 357 (395)
Q Consensus 357 l 357 (395)
+
T Consensus 243 ~ 243 (244)
T PF04142_consen 243 L 243 (244)
T ss_pred c
Confidence 5
No 19
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.71 E-value=1.2e-14 Score=138.63 Aligned_cols=211 Identities=10% Similarity=0.155 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHH-HHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccc
Q 016119 133 LGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSF-FFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLS 211 (395)
Q Consensus 133 ~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~-i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~ 211 (395)
.++.......+|+.++++++++.++++.+++|+|+.++++ +++|||++++++.++++.+.|+.++...+..+ .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~------~ 149 (292)
T COG0697 76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG------G 149 (292)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc------h
Confidence 3444577788999999999999999999999999999997 77799999999999999999999875332211 0
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH-HHHHHHHHHHHHHHHHhhchhhhhhhhhhhcch
Q 016119 212 KQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMII-YTAFVASCAILVGLFVSREWMGLNREMEAYQLG 290 (395)
Q Consensus 212 ~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~-~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~ 290 (395)
.. +..|+++++++++++++|.+..++.. +. ++..... +... +....... ....+.+ .+.. +...
T Consensus 150 ~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-------~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~~---~~~~ 214 (292)
T COG0697 150 IL-SLLGLLLALAAALLWALYTALVKRLS-RL-------GPVTLALLLQLL-LALLLLLL-FFLSGFG-APIL---SRAW 214 (292)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-------ChHHHHHHHHHH-HHHHHHHH-HHhcccc-ccCC---HHHH
Confidence 01 47899999999999999988876554 21 2222222 2222 11111111 1111111 0000 0111
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhh
Q 016119 291 KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQ 368 (395)
Q Consensus 291 ~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~ 368 (395)
....+..++..++++..+..+. ...++...+.....+++.+.+++++++||+++..+++|+.+++.|+.+.+..
T Consensus 215 ~~~~~~g~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 215 LLLLYLGVFSTGLAYLLWYYAL----RLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 1122233334444444444333 2344444555556777778888999999999999999999999999998765
No 20
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.70 E-value=4.2e-15 Score=143.65 Aligned_cols=269 Identities=14% Similarity=0.095 Sum_probs=176.0
Q ss_pred HHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHH
Q 016119 59 VICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITA 138 (395)
Q Consensus 59 v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~ 138 (395)
-.+++-..++..|... |....|+. +...+..++.....+.+. ++. ..++.+...+..|++++
T Consensus 9 a~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~--~~~------------~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 9 PALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL--PEF------------WALSIFLVGLLSGAFWA 70 (290)
T ss_pred HHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC--Ccc------------cccHHHHHHHHHHHHHH
Confidence 3344445566667655 65666654 455555554443333221 110 11367777888899999
Q ss_pred HHHHHHHhhccccChhHHHHHHh-hhHHHHHHHHHHHccccCChhH----HHHHHHHHHHHHhheeccCCCCcccccccc
Q 016119 139 ADCFLYSIGLRYLPVSTYSIICA-SQLAFNSFFSFFFNKQTFTPYI----INSLVLLTISSALLVFQNDSENKKGVLSKQ 213 (395)
Q Consensus 139 ~~~~l~~~sl~~~s~s~atvl~~-~~pift~l~s~i~~kek~t~~~----i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~ 213 (395)
..|.+|+.+.+++.++.+..+.+ ++++++.+++.+++|||.++++ +.|++++++|+++++..++++... + +..
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~-~-~~~ 148 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI-K-SEF 148 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccc-c-ccc
Confidence 99999999999999999999988 9999999999999999999999 999999999998875543221110 0 002
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHH---HHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcch
Q 016119 214 KYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDM---IIYTAFVASCAILVGLFVSREWMGLNREMEAYQLG 290 (395)
Q Consensus 214 ~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~---~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~ 290 (395)
+...|+++++.|+++|++|.+..+.. + + ++.+. +.+-.+++..+........+++ ..+ ...
T Consensus 149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~--~------~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~--~~~-- 212 (290)
T TIGR00776 149 NFKKGILLLLMSTIGYLVYVVVAKAF--G------V-DGLSVLLPQAIGMVIGGIIFNLGHILAKPL---KKY--AIL-- 212 (290)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHc--C------C-CcceehhHHHHHHHHHHHHHHHHHhcccch---HHH--HHH--
Confidence 23679999999999999999887642 1 1 33444 2222222332222111000111 000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHH----HHHHHHHHHHHHHH
Q 016119 291 KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKV----IAMVLAIWGFFSFL 366 (395)
Q Consensus 291 ~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~----iG~~lil~G~~~~~ 366 (395)
......++ ..+.+..|..+.. .+..+..+++++..+++++.+.+++++||+.+..++ +|+++++.|..+..
T Consensus 213 -~~~~~Gi~-~~ia~~~y~~~~~---~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 213 -LNILPGLM-WGIGNFFYLFSAQ---PKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHH-HHHHHHHHHHHcc---cccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 01112222 2444555555443 145566788899999889999999999999999999 99999999998765
Q ss_pred hh
Q 016119 367 YQ 368 (395)
Q Consensus 367 ~~ 368 (395)
..
T Consensus 288 ~~ 289 (290)
T TIGR00776 288 IG 289 (290)
T ss_pred cc
Confidence 44
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.68 E-value=1e-14 Score=138.21 Aligned_cols=251 Identities=8% Similarity=0.037 Sum_probs=154.4
Q ss_pred HHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGL 133 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 133 (395)
.+.++..+.++...++.|.. .+.++.++..+|...+.+++++.....+++ ++. ..+ .+++ ..++++......
T Consensus 5 ~~~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~-~~~-~~~---~~~~-~~~~~~~~~~~~ 76 (256)
T TIGR00688 5 IVSLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLFRQW-AAL-IER---LKRI-QKRPLILSLLLC 76 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHHcch-HHH-HHH---HhCc-ccchHHHHHHHH
Confidence 44555666778888999973 347888899999999888766533332211 110 000 0000 112334455567
Q ss_pred HHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccc
Q 016119 134 GIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQ 213 (395)
Q Consensus 134 Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~ 213 (395)
|++.+.+..+|++|++++|++.++++.++.|+|+++++++++|||++++++.++++.++|++++..++ + +
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~--~----~---- 146 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK--G----S---- 146 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc--C----C----
Confidence 77778888999999999999999999999999999999999999999999999999999998763221 0 0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHH
Q 016119 214 KYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVS 293 (395)
Q Consensus 214 ~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~ 293 (395)
.. +++++|+++|++|.+..++..++ + . .....+ .+............ .++..... .+........
T Consensus 147 ~~----~~~l~aa~~~a~~~i~~~~~~~~----~---~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l 211 (256)
T TIGR00688 147 LP----WEALVLAFSFTAYGLIRKALKNT----D---L-AGFCLE-TLSLMPVAIYYLLQ-TDFATVQQ-TNPFPIWLLL 211 (256)
T ss_pred ch----HHHHHHHHHHHHHHHHHhhcCCC----C---c-chHHHH-HHHHHHHHHHHHHH-hccCcccc-cCchhHHHHH
Confidence 11 35788999999998887653211 1 1 111111 11111111111111 11111000 0000011112
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhh
Q 016119 294 YVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVF 342 (395)
Q Consensus 294 ~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~ 342 (395)
....++ +.+++.+++.+. ++.++...+....++|+++.++++++
T Consensus 212 ~~~g~~-t~i~~~l~~~a~----~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 212 VLAGLI-TGTPLLAFVIAA----NRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHH-HHHHHHHHHHHH----HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 222222 445555555543 46677788889999999999988764
No 22
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.56 E-value=3.3e-15 Score=137.83 Aligned_cols=244 Identities=16% Similarity=0.164 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCC
Q 016119 124 FILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDS 203 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~ 203 (395)
.+......++.+...+-...-|..++|.+++++.+=++...+|+.++++.++|||-+..-..+..+.+.|-.+ +++..+
T Consensus 99 l~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l-GvdqE~ 177 (347)
T KOG1442|consen 99 LATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL-GVDQEG 177 (347)
T ss_pred HHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee-cccccc
Confidence 3444444444444434445567899999999999999999999999999999999999998888888777654 443211
Q ss_pred CCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhh
Q 016119 204 ENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNRE 283 (395)
Q Consensus 204 ~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~ 283 (395)
. .+.....|.+++..|+++-|+..+..++ +..+.. .-...++.|.+..+.+++++.+++.+|++.+..-
T Consensus 178 --~----~~~ls~~GvifGVlaSl~vAlnaiytkk----~l~~v~-~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~ 246 (347)
T KOG1442|consen 178 --S----TGTLSWIGVIFGVLASLAVALNAIYTKK----VLPPVG-DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGF 246 (347)
T ss_pred --c----cCccchhhhHHHHHHHHHHHHHHHhhhe----eccccc-CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCc
Confidence 1 2235789999999999999998777653 332221 2456788999999999999988888887654321
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHH
Q 016119 284 MEAYQLGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFF 363 (395)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~ 363 (395)
. ..+.+.+|..+...++.-...+....--++.+|+++.++-.+.+.....++++.+++|..+...|-|-.+++.|-.
T Consensus 247 ~---~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~ 323 (347)
T KOG1442|consen 247 P---HLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSL 323 (347)
T ss_pred c---cchHHHHHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence 0 1223445555555555433333333334788999999999999999999999999999999999999999999999
Q ss_pred HHHhhccchhhcccccCCC
Q 016119 364 SFLYQNYLDDYCKSKSNNG 382 (395)
Q Consensus 364 ~~~~~~~~~~k~~~~~~~~ 382 (395)
.|.+.|..+++|+.+++.+
T Consensus 324 ~YT~vk~~em~~~~~~~s~ 342 (347)
T KOG1442|consen 324 AYTLVKEHEMRKASAQRSP 342 (347)
T ss_pred HHHHHHHHHHHhhccCCCc
Confidence 9999998888777554433
No 23
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.55 E-value=1.2e-12 Score=124.17 Aligned_cols=287 Identities=12% Similarity=0.131 Sum_probs=190.0
Q ss_pred HHHhhhHhhhhheecc-CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHH
Q 016119 61 CGQAAATLLGRQYYDK-GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAA 139 (395)
Q Consensus 61 ~~~s~~~ll~r~~~~~-g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~ 139 (395)
+..+...++.|+.-.+ +++...+.-..|.....+.+. .+.+. +=. .-+| .++++.+..+|..+++.+
T Consensus 22 ~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~--~lk~~--~lv-------~~~~-l~~~~~kk~~P~~~lf~~ 89 (314)
T KOG1444|consen 22 LSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVL--VLKRL--GLV-------NFRP-LDLRTAKKWFPVSLLFVG 89 (314)
T ss_pred HHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH--HHHHh--cee-------ecCC-cChHHHHHHccHHHHHHH
Confidence 3444455555665544 455544444455544444222 22111 111 1133 566777777888888777
Q ss_pred HHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhH
Q 016119 140 DCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGF 219 (395)
Q Consensus 140 ~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ 219 (395)
....-..+++|++++.++++++..|+++++.+..++|.++++..+.++.++.+|....+..+. ..+..|.
T Consensus 90 ~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----------sf~~~gY 159 (314)
T KOG1444|consen 90 MLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL----------SFNLRGY 159 (314)
T ss_pred HHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc----------eecchhH
Confidence 677777899999999999999999999999999999999999999999999999877543322 1356699
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHHHHH
Q 016119 220 ICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVMNLV 299 (395)
Q Consensus 220 ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 299 (395)
..++...++-+.+....++.. +.... +...+++|-++++.....+..++.+|++++..+.+.+.. ...+..+.
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~v----d~~~l-~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~--~~~~~~~~ 232 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSV----DSANL-NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD--SSVLVVML 232 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhh----ccccc-cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc--hhHHHHHH
Confidence 999999999999887765433 32222 445677898998887777766777877633322222221 12233333
Q ss_pred HHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccchhhcc
Q 016119 300 WTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLDDYCK 376 (395)
Q Consensus 300 ~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~~k~~ 376 (395)
.+++.-+..+....--+...+++..++++..-.-...+..++++++++++.+.+|..+.+.|-+.|.|.+++++|.+
T Consensus 233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 33333222222222223456777778888333445666677777888999999999999999999999887654443
No 24
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.49 E-value=3.6e-11 Score=112.92 Aligned_cols=270 Identities=11% Similarity=0.088 Sum_probs=172.1
Q ss_pred hhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 016119 65 AATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLY 144 (395)
Q Consensus 65 ~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~ 144 (395)
..++..|+. +..+...+.+.|....+|+.+......+.. +.. .+ ..++| |.+..+...+++.+.+-+.|
T Consensus 21 ~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r~~-~~~---~~-~~~~p----~~~~~~~l~a~li~~nW~lf 89 (293)
T COG2962 21 LLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLRQW-REL---KQ-LLKQP----KTLLMLALTALLIGLNWWLF 89 (293)
T ss_pred HHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHhhh-HHH---HH-HHhCc----HHHHHHHHHHHHHHHHHHHh
Confidence 445555554 344556889999999999888765554321 111 00 01233 67778888899888888899
Q ss_pred HhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHHH
Q 016119 145 SIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTVG 224 (395)
Q Consensus 145 ~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~ 224 (395)
-++.+.=.+--+++=+..+|.+..+++++++|||+++.++++++++.+||....+..++ ..+. ++.
T Consensus 90 iWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~----------lpwv----al~ 155 (293)
T COG2962 90 IWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS----------LPWV----ALA 155 (293)
T ss_pred heecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC----------CcHH----HHH
Confidence 99999988888999999999999999999999999999999999999999876554322 2333 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHHHH--HHHH
Q 016119 225 ASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVMNL--VWTA 302 (395)
Q Consensus 225 Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~~~ 302 (395)
=|+.|++|..+ ||..+ .+..+-.....+.-.+.+++.++..++-..+.. ........++.. ..++
T Consensus 156 la~sf~~Ygl~-----RK~~~----v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~----~~~~~~~~LLv~aG~vTa 222 (293)
T COG2962 156 LALSFGLYGLL-----RKKLK----VDALTGLTLETLLLLPVALIYLLFLADSGQFLQ----QNANSLWLLLVLAGLVTA 222 (293)
T ss_pred HHHHHHHHHHH-----HHhcC----CchHHhHHHHHHHHhHHHHHHHHHHhcCchhhh----cCCchHHHHHHHhhHHHH
Confidence 56789998543 33222 122222222223222333332333222111000 001111112211 2344
Q ss_pred HHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccchhhcc
Q 016119 303 ICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLDDYCK 376 (395)
Q Consensus 303 i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~~k~~ 376 (395)
+...++..+... ..=..-+++...+|.+--++|++++||+++..+.++++++-.|+++|.+....+.+|+
T Consensus 223 vpL~lf~~aa~~----lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~ 292 (293)
T COG2962 223 VPLLLFAAAAKR----LPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKK 292 (293)
T ss_pred HHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 444444444322 2222346677788888889999999999999999999999999999998776554443
No 25
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.48 E-value=1.2e-12 Score=114.07 Aligned_cols=150 Identities=22% Similarity=0.297 Sum_probs=117.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhc--ch-hHHH
Q 016119 218 GFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQ--LG-KVSY 294 (395)
Q Consensus 218 G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~--~~-~~~~ 294 (395)
|+++++.|+++.|+|.++.|+.+++..++....++++++.|+++.+.+.+++..++.++.+......+... .. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78999999999999999999988874212223588999999999998888776666554332221111111 01 2245
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh
Q 016119 295 VMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 295 ~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~ 367 (395)
+..++.+++.+..++.....+++.++++..++++.++.++.+++++++|||+++..+++|+++.+.|++.|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5666677777777888888889999999999999999999999999999999999999999999999999976
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.47 E-value=4.1e-13 Score=124.31 Aligned_cols=237 Identities=16% Similarity=0.192 Sum_probs=168.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhccc-cChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 122 SFFILASVYVGLGIITAADCFLYSIGLRY-LPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 122 ~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~-~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
...|+....+ .+ +...|.+.|+++++ +|.....++++..++-+++.+|+++|+|.+.+|+.++++.++|+++-...
T Consensus 62 iplk~Y~i~V--~m-FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~ 138 (330)
T KOG1583|consen 62 IPLKDYAITV--AM-FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLF 138 (330)
T ss_pred Cchhhhheeh--he-eeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEee
Confidence 3345555444 22 23557888999998 89999999999999999999999999999999999999999999874433
Q ss_pred cCCCCc-------cccc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHH-
Q 016119 201 NDSENK-------KGVL--SKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVG- 270 (395)
Q Consensus 201 ~~~~~~-------~~~~--~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~- 270 (395)
++.+.. .+.. ....+.+|+.+...|-+..|...+.+|...+|+.| ++-|..+|..+.+...++..
T Consensus 139 s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGK-----h~~EalFytH~LsLP~Flf~~ 213 (330)
T KOG1583|consen 139 SSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGK-----HWKEALFYTHFLSLPLFLFMG 213 (330)
T ss_pred cCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ChHHHHHHHHHhccchHHHhc
Confidence 221110 0100 11124689888888999999888889999998644 44578899988766554321
Q ss_pred HHHhhchhhhhhhhhhhc---ch--hHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccc
Q 016119 271 LFVSREWMGLNREMEAYQ---LG--KVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRD 345 (395)
Q Consensus 271 l~~~~~~~~l~~~~~~~~---~~--~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E 345 (395)
-=+..+|..... .+.+. .| ....|.-++.+.+.-..|.-|+.-+...+++++.+++.+++--++.+++++.|++
T Consensus 214 ~div~~~~~~~~-se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~N 292 (330)
T KOG1583|consen 214 DDIVSHWRLAFK-SESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFEN 292 (330)
T ss_pred chHHHHHHHHhc-CcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecC
Confidence 000111221111 11111 01 1234455666667655555555555668899999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHh
Q 016119 346 KMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 346 ~lt~~~~iG~~lil~G~~~~~~ 367 (395)
++++..|+|..++..|-++|.-
T Consensus 293 pft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 293 PFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998864
No 27
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.46 E-value=1.9e-11 Score=112.15 Aligned_cols=252 Identities=11% Similarity=0.065 Sum_probs=155.3
Q ss_pred hhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 016119 70 GRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYSIGLR 149 (395)
Q Consensus 70 ~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~sl~ 149 (395)
.|-.|..-|. .-++++|..++..+++.. ++.++ +| .+++++......|...+.-|.++|.|++
T Consensus 31 Ak~LFP~vG~-~g~t~lRl~~aaLIll~l--~RPwr-~r-------------~~~~~~~~~~~yGvsLg~MNl~FY~si~ 93 (292)
T COG5006 31 AKSLFPLVGA-AGVTALRLAIAALILLAL--FRPWR-RR-------------LSKPQRLALLAYGVSLGGMNLLFYLSIE 93 (292)
T ss_pred HHHHccccCh-hhHHHHHHHHHHHHHHHH--hhHHH-hc-------------cChhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444332 334677777777765542 22221 12 3345666677788888888999999999
Q ss_pred ccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHHHHHHHH
Q 016119 150 YLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTVGASAGY 229 (395)
Q Consensus 150 ~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~ 229 (395)
.+|.+++..+-.+.|+-+++++- +|..-. .-+.+++.|..++. .++.+ ..+.+..|..++++|+.+|
T Consensus 94 riPlGiAVAiEF~GPL~vA~~~s----Rr~~d~--vwvaLAvlGi~lL~-p~~~~------~~~lDp~Gv~~Al~AG~~W 160 (292)
T COG5006 94 RIPLGIAVAIEFTGPLAVALLSS----RRLRDF--VWVALAVLGIWLLL-PLGQS------VWSLDPVGVALALGAGACW 160 (292)
T ss_pred hccchhhhhhhhccHHHHHHHhc----cchhhH--HHHHHHHHHHHhhe-eccCC------cCcCCHHHHHHHHHHhHHH
Confidence 99999999999999999887663 443333 44556777877653 22211 1224689999999999999
Q ss_pred HHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchh--HHHHHHHHHHHHHHHH
Q 016119 230 GFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGK--VSYVMNLVWTAICWQI 307 (395)
Q Consensus 230 aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~--~~~~~~l~~~~i~~~~ 307 (395)
++|++..|+..+.. +.. .-+.+-..++.++.++.-.... ...-|.+.. ......++.+++-|.+
T Consensus 161 a~YIv~G~r~g~~~-~g~------~g~a~gm~vAaviv~Pig~~~a-------g~~l~~p~ll~laLgvavlSSalPYsL 226 (292)
T COG5006 161 ALYIVLGQRAGRAE-HGT------AGVAVGMLVAALIVLPIGAAQA-------GPALFSPSLLPLALGVAVLSSALPYSL 226 (292)
T ss_pred HHHHHHcchhcccC-CCc------hHHHHHHHHHHHHHhhhhhhhc-------chhhcChHHHHHHHHHHHHhcccchHH
Confidence 99999988765421 111 1112233444444433212111 001122211 1122333444444443
Q ss_pred HHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 308 FSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 308 ~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
=.+.+. ....-.-+++.++||.++.+.+++++||++++.||.|+.+++.+..-..+..
T Consensus 227 EmiAL~----rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 227 EMIALR----RLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred HHHHHh----hCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 222222 2233344677889999999999999999999999999999999877554433
No 28
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.46 E-value=3.6e-12 Score=115.55 Aligned_cols=226 Identities=13% Similarity=0.177 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcc
Q 016119 128 SVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKK 207 (395)
Q Consensus 128 ~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~ 207 (395)
+.++.+.+-+-+.....|.+++|.|-.++.+-++..|+=++++++++.|++.+|++..++++..+|+++..........
T Consensus 86 ~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g- 164 (337)
T KOG1580|consen 86 KMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGG- 164 (337)
T ss_pred hHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCC-
Confidence 4455555555555667789999999999999999999999999999999999999999999999999986544221111
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhh
Q 016119 208 GVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAY 287 (395)
Q Consensus 208 ~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~ 287 (395)
. +++...+|-++.++|-..=++--..+++..+.. . +..-.|++|+++++++.+-+++++.+|..++..-.++.
T Consensus 165 -~-e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q----~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~Rh 237 (337)
T KOG1580|consen 165 -A-EDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-Q----RTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRH 237 (337)
T ss_pred -C-cccccchHHHHHHHHHHhcccchhHHHHHHHhh-c----cCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhc
Confidence 1 233567899999999888888777777765442 2 23346889999999999888888888643222111111
Q ss_pred cchhHHHHHHHHH-HHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 288 QLGKVSYVMNLVW-TAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 288 ~~~~~~~~~~l~~-~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
....+-+.++. ....-|.+..- .+.+-+++.-+++.+-+--.+++.++++|+++++..||+|.++++.|...=.
T Consensus 238 --P~~~~~l~l~ai~s~LGQ~fIF~---tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~ 312 (337)
T KOG1580|consen 238 --PYVFWDLTLLAIASCLGQWFIFK---TVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADV 312 (337)
T ss_pred --cHHHHHHHHHHHHHHhhhHHHHH---HHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHh
Confidence 11111122221 11112222111 1235677888888888889999999999999999999999999999876543
No 29
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.35 E-value=4.2e-12 Score=112.34 Aligned_cols=222 Identities=17% Similarity=0.236 Sum_probs=152.7
Q ss_pred HHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccc
Q 016119 130 YVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGV 209 (395)
Q Consensus 130 ~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~ 209 (395)
..++.+++.+.|++|-.+++.++++.++.+...+-.|+.+++++.+++++...|+.+.++++.|+++++..|.
T Consensus 56 taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN------- 128 (290)
T KOG4314|consen 56 TAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN------- 128 (290)
T ss_pred ecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc-------
Confidence 3477888889999999999999999999999999999999999999999999999999999999988764432
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH-HH--HHHHhhchhhhhhhhhh
Q 016119 210 LSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAI-LV--GLFVSREWMGLNREMEA 286 (395)
Q Consensus 210 ~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~-li--~l~~~~~~~~l~~~~~~ 286 (395)
...+.+.|..++.+|++..|+| +.++|..+....+-+.-..+-..+++..++. .+ .+.+++- +. ++.
T Consensus 129 -~~a~e~iGi~~AV~SA~~aAlY----KV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V-E~----~qs 198 (290)
T KOG4314|consen 129 -EHADEIIGIACAVGSAFMAALY----KVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGV-EH----LQS 198 (290)
T ss_pred -hhhhhhhhHHHHHHHHHHHHHH----HHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch-HH----HHH
Confidence 1224799999999999999999 5555665544333222222211222222111 11 1122221 00 111
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHhh-hhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 287 YQLGKVSYVMNLVWTAICWQIFSIGS-VGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 287 ~~~~~~~~~~~l~~~~i~~~~~~~~~-~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
|.. ..|-.+++.+..|..++..+ +|+. .+.++.-++...+..|.....+.++=+-..+.....|..++..|+++.
T Consensus 199 FA~---~PWG~l~G~A~L~lAFN~~iN~Gia-L~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 199 FAA---APWGCLCGAAGLSLAFNFLINFGIA-LLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred Hhh---CCchhhhhHHHHHHHHhhheeehhh-hhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 111 12334555555555554322 2322 466777777788889999999988777778889999999999999988
Q ss_pred Hhhccch
Q 016119 366 LYQNYLD 372 (395)
Q Consensus 366 ~~~~~~~ 372 (395)
.....+|
T Consensus 275 iiP~d~~ 281 (290)
T KOG4314|consen 275 IIPEDKD 281 (290)
T ss_pred ecccchh
Confidence 7655443
No 30
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.35 E-value=4.5e-11 Score=110.57 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=206.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHhhhHhhhhheecc-CCC-ccchHhHHHhhchhHHhhhHhhhcc---c-CCchhhhcccc
Q 016119 43 SRNYWRWIRLGIYALFVICGQAAATLLGRQYYDK-GGN-SNWLATLVQLAGFPILLPYYCCINI---S-TPFVQLQRKIK 116 (395)
Q Consensus 43 ~~~~~~~~~~~~~~~~v~~~~s~~~ll~r~~~~~-g~~-~~~~~t~~~~~~~~~ll~~~~~~~~---~-~~~~~~~~~~~ 116 (395)
.-++.+|....+|...+++++-.++.+..+.|+. |.+ --|..|++|+.--.. +.+..+ + +++.
T Consensus 35 ls~kpkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg----~glie~~~~~~k~r~------- 103 (367)
T KOG1582|consen 35 LSDKPKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSG----FGLIELQLIQTKRRV------- 103 (367)
T ss_pred cccCchhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHh----hhheEEEeeccccee-------
Confidence 4467789999999999999999999999888876 555 379999988533221 111111 1 1111
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 117 IKPPNSFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 117 ~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
..+|. ++.+..+..++..+.+-|+.|+.-.+..+.+++..+=+++.+.++-++|..+....+..++.+|.++
T Consensus 104 -----iP~rt---Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~ 175 (367)
T KOG1582|consen 104 -----IPWRT---YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIW 175 (367)
T ss_pred -----cchhH---hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHh
Confidence 12343 3333334445566788999999999999999999999999999999999999999999999999998
Q ss_pred heeccCCCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 016119 197 LVFQNDSENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSRE 276 (395)
Q Consensus 197 v~~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~ 276 (395)
....|....| +.+..|..+.-+|-++=|..-=++|+.+++. + ....+|.+|...++.+.++..+..+++
T Consensus 176 FTLADs~~sP------NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~--~---~ss~EmvfySy~iG~vflf~~mvlTge 244 (367)
T KOG1582|consen 176 FTLADSQTSP------NFNLIGVMMISGALLADAVIGNVQEKAMKMN--P---ASSSEMVFYSYGIGFVFLFAPMVLTGE 244 (367)
T ss_pred hhhcccccCC------CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC--C---CCcceEEEeeecccHHHHHHHHHhccc
Confidence 7666543322 3678999999999888888777778777763 2 133678888888888888777777775
Q ss_pred h-hhhhhhhhhhcchhH-HHHHHHHHHHHHH--HHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHH
Q 016119 277 W-MGLNREMEAYQLGKV-SYVMNLVWTAICW--QIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKV 352 (395)
Q Consensus 277 ~-~~l~~~~~~~~~~~~-~~~~~l~~~~i~~--~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~ 352 (395)
. +.++. .....+ .|...++.+...+ +...++ +++.-++..+..+.+.+-.++++++.++|..++|....
T Consensus 245 ~f~a~~f----caehp~~tyGy~~~~s~~gylG~~~VLa---lI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~ 317 (367)
T KOG1582|consen 245 LFSAWTF----CAEHPVRTYGYAFLFSLAGYLGIVFVLA---LIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYV 317 (367)
T ss_pred chhhhHH----HHhCcHhHHHHHHHHHHHhHhhHHHHHH---HHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHh
Confidence 2 21111 111111 2222222222221 222222 23445556677788888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 016119 353 IAMVLAIWGFFSFLYQNY 370 (395)
Q Consensus 353 iG~~lil~G~~~~~~~~~ 370 (395)
-|..+++.|+++-.|++.
T Consensus 318 ~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 318 WSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred hhhHHHHHHHHhhcccCC
Confidence 999999999999999883
No 31
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.32 E-value=1.8e-12 Score=119.51 Aligned_cols=211 Identities=14% Similarity=0.129 Sum_probs=135.1
Q ss_pred HHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccC--CCCccccc-cc-ccchh
Q 016119 142 FLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQND--SENKKGVL-SK-QKYAI 217 (395)
Q Consensus 142 ~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~--~~~~~~~~-~~-~~~~~ 217 (395)
.+.|+|+.|.|.+-|+++..++|.||.+++|+++||++|+...++..+.+.|++++.-.++ .++..+.. +. ..+..
T Consensus 112 mlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~ 191 (346)
T KOG4510|consen 112 MLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIP 191 (346)
T ss_pred HHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCC
Confidence 4556899999999999999999999999999999999999999999999999998743332 11111110 11 23578
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHHH
Q 016119 218 GFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVMN 297 (395)
Q Consensus 218 G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~~ 297 (395)
|.+.++.++++-|--.++.++..|++ .+ .+. ..|.++++++..+++....++++ +|+....+ .....
T Consensus 192 gt~aai~s~lf~asvyIilR~iGk~~----h~--~ms-vsyf~~i~lV~s~I~~~~ig~~~-lP~cgkdr-----~l~~~ 258 (346)
T KOG4510|consen 192 GTVAAISSVLFGASVYIILRYIGKNA----HA--IMS-VSYFSLITLVVSLIGCASIGAVQ-LPHCGKDR-----WLFVN 258 (346)
T ss_pred chHHHHHhHhhhhhHHHHHHHhhccc----cE--EEE-ehHHHHHHHHHHHHHHhhcccee-cCccccce-----EEEEE
Confidence 88888888777666555555544442 12 122 24667777777776655444443 23221111 11112
Q ss_pred HHHHHHHHHHH-HHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 298 LVWTAICWQIF-SIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 298 l~~~~i~~~~~-~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
+..++...|+. .+++. .-.. .-.++....-.+.+.+..+++|||..|++.|+|+++++...+.....|
T Consensus 259 lGvfgfigQIllTm~lQ--iErA--Gpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 259 LGVFGFIGQILLTMGLQ--IERA--GPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred ehhhhhHHHHHHHHHhh--hhcc--CCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 22333334432 23321 1111 223344444456688899999999999999999999988777665444
No 32
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.32 E-value=4.9e-10 Score=105.55 Aligned_cols=236 Identities=11% Similarity=0.125 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCC
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSE 204 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~ 204 (395)
+.+..+..+++......++-+.||+|++-.+.++-++...+=+++...++.|+|++.++.....+...|+.+....+.++
T Consensus 81 apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 81 APLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred CchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 34566666777777778899999999999999999999999999999999999999999999999999997765543333
Q ss_pred CcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchh-hhhhh
Q 016119 205 NKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWM-GLNRE 283 (395)
Q Consensus 205 ~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~-~l~~~ 283 (395)
.+... .+.+.++|+.+..+.-++=|+-...+..++++ +. .....|+++++++.++.....++..+.+. .+.
T Consensus 161 s~~~~-g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~----~k-~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~-- 232 (327)
T KOG1581|consen 161 SSSKS-GRENSPIGILLLFGYLLFDGFTNATQDSLFKK----YK-VSSLHMMFGVNLFSAILNGTYLILQGHLLPAVS-- 232 (327)
T ss_pred Ccccc-CCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc----CC-ccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHH--
Confidence 22110 12357899999988877766666666666654 22 46788999999999888877766555422 110
Q ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHH
Q 016119 284 MEAYQLGKVSYVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFF 363 (395)
Q Consensus 284 ~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~ 363 (395)
.-.-.+..+...+.....+..-|.+.... +..-+++.-..+.+.+..++++++.+.||.++++.||+|..+++.|+.
T Consensus 233 F~~~hp~~~~Di~l~s~~gavGQ~FI~~T---I~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~ 309 (327)
T KOG1581|consen 233 FIKEHPDVAFDILLYSTCGAVGQLFIFYT---IERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIF 309 (327)
T ss_pred HHHcChhHHHHHHHHHHhhhhhhheehhh---HhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHH
Confidence 00001111122222222222334322111 112344566667788889999999999999999999999999999998
Q ss_pred HHHhhccc
Q 016119 364 SFLYQNYL 371 (395)
Q Consensus 364 ~~~~~~~~ 371 (395)
.=.+-+.+
T Consensus 310 l~~~~k~~ 317 (327)
T KOG1581|consen 310 LEILLKKK 317 (327)
T ss_pred HHHHHHHh
Confidence 87776655
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.23 E-value=4.4e-12 Score=116.31 Aligned_cols=282 Identities=12% Similarity=0.166 Sum_probs=172.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchH
Q 016119 45 NYWRWIRLGIYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFF 124 (395)
Q Consensus 45 ~~~~~~~~~~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (395)
.+|-|+-..+.=.+-++.. +........-..|-|-|-.+++....-..+..-+...+++ + ..+
T Consensus 13 tkk~li~~~LGQiLSL~~t-~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~-------------~~~ 75 (336)
T KOG2766|consen 13 TKKTLIGLGLGQILSLLIT-STAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR---K-------------YIK 75 (336)
T ss_pred chhhhheeeHHHHHHHHHH-cchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh---H-------------HHH
Confidence 5666665554444333332 2223333333356788888887765444443334444322 1 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCC-
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDS- 203 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~- 203 (395)
-.+.-++++++.=.-.|++---+++|++.....++-+-...-+.+++|+++|-|..+.|+.|+++++.|++++...|-.
T Consensus 76 ~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~a 155 (336)
T KOG2766|consen 76 AKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHA 155 (336)
T ss_pred HHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeecc
Confidence 1222355556553344656668999999999999999999999999999999999999999999999999886544321
Q ss_pred CCcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhh-chhhhhh
Q 016119 204 ENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSR-EWMGLNR 282 (395)
Q Consensus 204 ~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~-~~~~l~~ 282 (395)
++.+ ...+...||++.+++|-+||.--+..|...|| .+..+++.+.+++|+++..+=.+.+. +...+..
T Consensus 156 gd~a---ggsnp~~GD~lvi~GATlYaVSNv~EEflvkn-------~d~~elm~~lgLfGaIIsaIQ~i~~~~~~~tl~w 225 (336)
T KOG2766|consen 156 GDRA---GGSNPVKGDFLVIAGATLYAVSNVSEEFLVKN-------ADRVELMGFLGLFGAIISAIQFIFERHHVSTLHW 225 (336)
T ss_pred cccc---CCCCCccCcEEEEecceeeeeccccHHHHHhc-------CcHHHHHHHHHHHHHHHHHHHHhhhccceeeEee
Confidence 1111 12357899999999999999988887777666 25567788889998888766433322 1111111
Q ss_pred hhhhhcchhHHHHHHHHHHHHH-HHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHH
Q 016119 283 EMEAYQLGKVSYVMNLVWTAIC-WQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWG 361 (395)
Q Consensus 283 ~~~~~~~~~~~~~~~l~~~~i~-~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G 361 (395)
+ + .....+. .++. +.+|.+.-. +.+..++..-|+-..-...-+.+ +-.||-+++|...+.+..+..|
T Consensus 226 ~------~--~i~~yl~-f~L~MFllYsl~pi-l~k~~~aT~~nlslLTsDmwsl~--i~~FgYhv~wLY~laF~~i~~G 293 (336)
T KOG2766|consen 226 D------S--AIFLYLR-FALTMFLLYSLAPI-LIKTNSATMFNLSLLTSDMWSLL--IRTFGYHVDWLYFLAFATIATG 293 (336)
T ss_pred h------H--HHHHHHH-HHHHHHHHHHhhHH-heecCCceEEEhhHhHHHHHHHH--HHHHhcchhhhhHHHHHHHHHh
Confidence 1 0 1111112 3332 334443221 23444443333211111111222 2567888999999999999999
Q ss_pred HHHH
Q 016119 362 FFSF 365 (395)
Q Consensus 362 ~~~~ 365 (395)
+++|
T Consensus 294 liiY 297 (336)
T KOG2766|consen 294 LIIY 297 (336)
T ss_pred hEEe
Confidence 9998
No 34
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.06 E-value=1e-09 Score=91.16 Aligned_cols=77 Identities=18% Similarity=0.309 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccC
Q 016119 125 ILASVYVGLGIITA-ADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQND 202 (395)
Q Consensus 125 k~~~~~~~~Gl~~~-~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~ 202 (395)
|.+......|++.. .++.+|++|+++.| +..+++.+++|+|+++++++++|||++++++.+++++++|++++..++.
T Consensus 32 ~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 32 KPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 33445555566653 77889999999999 5888999999999999999999999999999999999999999876543
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.03 E-value=8.5e-10 Score=91.75 Aligned_cols=121 Identities=18% Similarity=0.131 Sum_probs=92.3
Q ss_pred HhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHH-HHHHH
Q 016119 63 QAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGII-TAADC 141 (395)
Q Consensus 63 ~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~-~~~~~ 141 (395)
++.+.++.|...++ .++.....++...+.+ +++...+..++..+ + ...+.+......|++ .+..+
T Consensus 3 ~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFK-----------N-LSPRQWLWLLFLGLLGTALAY 68 (126)
T ss_pred eeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhcccccc-----------C-CChhhhhhhhHhhccceehHH
Confidence 34566677766655 6778888888888877 55434333221101 0 223455555556666 47788
Q ss_pred HHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 142 FLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 142 ~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
.+++.++++++++.++++.+++|+++.+++++++||+++++++.|+++.+.|++++
T Consensus 69 ~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 69 LLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999875
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.01 E-value=2.4e-08 Score=90.23 Aligned_cols=219 Identities=17% Similarity=0.251 Sum_probs=138.4
Q ss_pred HHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHH
Q 016119 141 CFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFI 220 (395)
Q Consensus 141 ~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~l 220 (395)
.+.-.-+++|++++.+++.++++.+.++.....+++.|.+-....+-+++++..+.-.++|..... . ..+.--.|.+
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~--~-~~~~lN~GY~ 158 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASA--F-KAQILNPGYL 158 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHH--H-HhcccCCceE
Confidence 444567999999999999999999999999999999999999999999998887764444321110 0 0112235666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHHHHHH
Q 016119 221 CTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVMNLVW 300 (395)
Q Consensus 221 l~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 300 (395)
....-++..+.|...++ |.++-..+.+ .+-++|..+.+..+++..-+..+||+.-. -+..+.... .+.++.
T Consensus 159 Wm~~NclssaafVL~mr----kri~ltNf~d-~dtmfYnNllslPiL~~~s~~~edws~~n-~annl~~d~---l~am~I 229 (309)
T COG5070 159 WMFTNCLSSAAFVLIMR----KRIKLTNFKD-FDTMFYNNLLSLPILLSFSFLFEDWSPGN-LANNLSVDS---LMAMFI 229 (309)
T ss_pred EEehhhHhHHHHHHHHH----Hhhcccccch-hhHHHHhhhHHHHHHHHHHHHhccCCcch-hhcCCChHH---HHHHHH
Confidence 66667777777766554 3333232333 56678999888777665445555665210 012233222 122222
Q ss_pred HHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccc
Q 016119 301 TAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYL 371 (395)
Q Consensus 301 ~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~ 371 (395)
+++..........--+..+++..-+.++.+---...+.|.++|+|+.+...+..+.+-...-++|.+.+.+
T Consensus 230 Sgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 230 SGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred HHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211000000000133566666777777765556778999999999999999888877666777665544
No 37
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.81 E-value=3.6e-08 Score=91.46 Aligned_cols=202 Identities=12% Similarity=0.114 Sum_probs=111.8
Q ss_pred ChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccC-----------------CCCccccccccc
Q 016119 152 PVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQND-----------------SENKKGVLSKQK 214 (395)
Q Consensus 152 s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~-----------------~~~~~~~~~~~~ 214 (395)
++...+..++.+++++++..+.+.+||.+..|+.+.++.+.|++.....+. ++..+.....++
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 444566667777777777777777777777777777777777653211111 000000001124
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchh-HH
Q 016119 215 YAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGK-VS 293 (395)
Q Consensus 215 ~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~-~~ 293 (395)
.+.|..+.+.++++-++-.+..|+..|+ ++ ...........+++.+....+.... +...... ..+..+. ..
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~---~~--~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 154 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKD---GD--TMFWSRNLQLPLFGLFSTFSVLLWS-DGTLISN--FGFFIGYPTA 154 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccC---CC--CchHHHHHHHHHHHHHHHHHHHhhc-ccchhhc--cCcccCCchH
Confidence 5777777777777777766666654332 11 1111111112222222212222211 1111111 1111111 12
Q ss_pred HHHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 294 YVMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 294 ~~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
.+..++..++..+ .+..+.++.++...++..++++.++.++++++|||+++..+++|..+++.|+.+|
T Consensus 155 ~~~~~~~~a~~~~----~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 155 VWIVGLLNVGGGL----CIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHhcCc----eeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2222222333222 1334567888889999999999999999999999999999999999999987654
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.75 E-value=4.1e-08 Score=81.46 Aligned_cols=133 Identities=15% Similarity=0.086 Sum_probs=97.7
Q ss_pred HHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGL 133 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 133 (395)
++.++....++..+++.|.--+ |-|+ .++|.+.+......+..+.+...+.... .. ...|.+...+..
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~-~vdp-~~At~IRtiVi~~~l~~v~~~~g~~~~~---------~~-~~~k~~lflilS 73 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLE-GVDP-DFATTIRTIVILIFLLIVLLVTGNWQAG---------GE-IGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccCc-cHHHHHHHHHHHHHHHHHHHhcCceecc---------cc-cCcceehhhhHH
Confidence 3445556677888899887532 3344 4466555544444443344432211110 01 345778888888
Q ss_pred HHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 134 GIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 134 Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
|+..+..-.+||.+++.=++|...-+..++|++++++++++++||+|.++++|+++..+|+++++
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 98888888999999999999999999999999999999999999999999999999999998864
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.73 E-value=1.8e-06 Score=81.85 Aligned_cols=113 Identities=20% Similarity=0.127 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHH-hhhHHHHHHHHHHHccccCChhHHH----HHHHHHHHHHhhe
Q 016119 124 FILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIIC-ASQLAFNSFFSFFFNKQTFTPYIIN----SLVLLTISSALLV 198 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~-~~~pift~l~s~i~~kek~t~~~i~----si~l~~~Gv~lv~ 198 (395)
.+.+...+..|++++..+...+.|+++..+|.+-=+. ..|.+.+.++++++++|.-+...+. ++++.++|+.+-+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 4788999999999999999999999998888775443 7888999999999999998877655 7788899998866
Q ss_pred eccCCCCcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 016119 199 FQNDSENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQL 238 (395)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~ 238 (395)
..+.+++..+ ++++...|.+..+.+++.|..|.++.+.
T Consensus 122 ~~~~~~~~~~--~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 122 YQDKKSDKSS--SKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred cccccccccc--cccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5543322110 2234577999999999999999887543
No 40
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.41 E-value=7.1e-06 Score=77.41 Aligned_cols=129 Identities=19% Similarity=0.173 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHhhhHhhhhheeccCC-CccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHH
Q 016119 52 LGIYALFVICGQAAATLLGRQYYDKGG-NSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVY 130 (395)
Q Consensus 52 ~~~~~~~v~~~~s~~~ll~r~~~~~g~-~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ 130 (395)
.....+.-.++++.+.+..|...++.. +...+..++...+.+++++..... .+ .. + .+.+.+...
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~--~~----------~-~~~~~~~~~ 194 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GP--NP----------Q-ALSLQWGAL 194 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CC--CC----------C-cchHHHHHH
Confidence 444555666677777778877654322 222333355666666666543332 11 10 1 122444444
Q ss_pred HHHHHHH-HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHH
Q 016119 131 VGLGIIT-AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISS 194 (395)
Q Consensus 131 ~~~Gl~~-~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv 194 (395)
...|++. .....+|+.++++++++.++++.++.|++++++++++++|++++.++.|+++.+.|+
T Consensus 195 ~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 195 LYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 4455553 566789999999999999999999999999999999999999999999999999886
No 41
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.35 E-value=9.8e-06 Score=70.23 Aligned_cols=139 Identities=19% Similarity=0.100 Sum_probs=102.3
Q ss_pred HHHHHHHHhhhHhhhhheecc------CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCC-chHHHHH
Q 016119 56 ALFVICGQAAATLLGRQYYDK------GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPN-SFFILAS 128 (395)
Q Consensus 56 ~~~v~~~~s~~~ll~r~~~~~------g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~ 128 (395)
.+.-.+..+...++.|..+.+ ..++..+..+....++++++++.++........ ...+. ...+. ...+.+.
T Consensus 5 ~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~-~~~~~-~~~~~~~~~~~~~ 82 (153)
T PF03151_consen 5 ALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSS-FFSEI-FGEELSSDPNFIF 82 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-HHHHh-hhhhhcchHHHHH
Confidence 344445566666777665554 557788888888899999888766643321110 00000 00000 1335666
Q ss_pred HHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 129 VYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 129 ~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
..+..|++....|+..+..++++++-+.+++....-+.+.++++++++|++|..++.|++++++|+.+
T Consensus 83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 67777888888899999999999999999999999999999999999999999999999999999875
No 42
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.31 E-value=5.5e-06 Score=68.54 Aligned_cols=62 Identities=10% Similarity=0.122 Sum_probs=58.4
Q ss_pred HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 137 TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 137 ~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
++....++..+++..|+|.+..+-++.++++++++++++|||+|++++.|+.+.++|+++++
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 46677899999999999999999999999999999999999999999999999999999875
No 43
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.31 E-value=3.9e-06 Score=69.44 Aligned_cols=123 Identities=12% Similarity=0.201 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhH--HHHHHHHHHHHHH
Q 016119 228 GYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKV--SYVMNLVWTAICW 305 (395)
Q Consensus 228 ~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~--~~~~~l~~~~i~~ 305 (395)
+||.+.++.++..++ .++..+.++...++.+ +++.....+..+ ...+..... .....++..++.+
T Consensus 2 ~~a~~~~~~k~~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 68 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK-------ISPLSITFWRFLIAGI-LLILLLILGRKP-----FKNLSPRQWLWLLFLGLLGTALAY 68 (126)
T ss_pred eeeeHHHHHHHHhcc-------CCHHHHHHHHHHHHHH-HHHHHHhhcccc-----ccCCChhhhhhhhHhhccceehHH
Confidence 567777776665554 2567788888888776 444333333211 011111111 1122223334445
Q ss_pred HHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh
Q 016119 306 QIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 306 ~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~ 367 (395)
..+..+. ++.+....+.+..++|+++.++++++++|++++.+++|+++++.|+++.+|
T Consensus 69 ~~~~~a~----~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~~ 126 (126)
T PF00892_consen 69 LLYFYAL----KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIST 126 (126)
T ss_pred HHHHHHH----HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHC
Confidence 5555443 345666777888888999999999999999999999999999999988754
No 44
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.31 E-value=1.3e-05 Score=79.75 Aligned_cols=143 Identities=12% Similarity=0.043 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhh-chhHHhhhHhhhcccCCchhhhccccCCCCCchHHH
Q 016119 48 RWIRLGIYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLA-GFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFIL 126 (395)
Q Consensus 48 ~~~~~~~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~-~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 126 (395)
.|.+.....+.-.++++.+.++.|-.-.+-.......++...+ +.+..++ .........+. .. .. .....
T Consensus 186 ~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~-~l~~~~~~~~~--~~-----~~-~~~~~ 256 (358)
T PLN00411 186 DWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMI-GLVVEKNNPSV--WI-----IH-FDITL 256 (358)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHH-HHHHccCCccc--ce-----ec-cchHH
Confidence 4556666666667777888887764322211222333343333 3333332 22221110000 00 00 11122
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 127 ASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 127 ~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
+. .+..|+..+....+|++++++.+++.+++..+++|+|++++++++++|+++..+++|.++.+.|+.++...
T Consensus 257 ~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 257 IT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 22 22244444555678999999999999999999999999999999999999999999999999999886543
No 45
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.28 E-value=6.6e-06 Score=68.50 Aligned_cols=131 Identities=14% Similarity=0.213 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHH-HHH
Q 016119 219 FICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSY-VMN 297 (395)
Q Consensus 219 ~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~-~~~ 297 (395)
.+.+++||+++++--++.+...|++ |+..-++.-..+..+.+....+..++++... + ..+..+.| .+.
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~v-------dp~~At~IRtiVi~~~l~~v~~~~g~~~~~~-~---~~~k~~lflilS 73 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGV-------DPDFATTIRTIVILIFLLIVLLVTGNWQAGG-E---IGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccc-------CccHHHHHHHHHHHHHHHHHHHhcCceeccc-c---cCcceehhhhHH
Confidence 4688999999999888776665542 3333334444444444444455566554321 1 11111111 112
Q ss_pred HHHHHHHHHHHHHhhh-hheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 298 LVWTAICWQIFSIGSV-GLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 298 l~~~~i~~~~~~~~~~-g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
-+..+++|++|...+. |-...+-+ ++...+.+++++++++++|+++..+|+|+++|.+|.++.
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvP-----ldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVP-----LDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEE-----cccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 2345556888775542 11111111 233456789999999999999999999999999998654
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.19 E-value=5.1e-05 Score=73.35 Aligned_cols=74 Identities=11% Similarity=0.016 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 125 ILASVYVGLGII-TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 125 k~~~~~~~~Gl~-~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
+.+......|++ ......+|+.++++.+++.++++..+.|++.+++++++++|+++..++.|.++.+.|+.++.
T Consensus 210 ~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 210 SGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 444444455665 35667899999999999999999999999999999999999999999999999999998763
No 47
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.16 E-value=1.6e-05 Score=77.16 Aligned_cols=64 Identities=25% Similarity=0.320 Sum_probs=57.8
Q ss_pred HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheecc
Q 016119 138 AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQN 201 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~ 201 (395)
+....+.+.|+.+.|++.-+-+...+.+|+++++..++|||++++.+.|+.+++.|++++....
T Consensus 61 ~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 61 VLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred hcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 4556788899999999999999999999999999999999999999999999999998765443
No 48
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.14 E-value=6.1e-05 Score=72.87 Aligned_cols=130 Identities=17% Similarity=0.089 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHH
Q 016119 52 LGIYALFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYV 131 (395)
Q Consensus 52 ~~~~~~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 131 (395)
.....+...++++.+.++.|.+.+ ..+ +...++.+..+..++++ +...... .. . .+...+...+
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~-~~~-~~~~~~~~~~~~~~l~~-~~~~~~~--~~----------~-~~~~~~~~~l 212 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGA-EHG-PATVAIGSLIAALIFVP-IGALQAG--EA----------L-WHWSILPLGL 212 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-cCC-chHHHHHHHHHHHHHHH-HHHHccC--cc----------c-CCHHHHHHHH
Confidence 333444445666677777776532 223 33345555555555444 3222110 10 0 1122333334
Q ss_pred HHHHHH-HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 132 GLGIIT-AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 132 ~~Gl~~-~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
..|++. .....+|+.++++.+++.++++.+++|++..++++++++|+++..+++|.++.+.|++..
T Consensus 213 ~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~ 279 (293)
T PRK10532 213 AVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGS 279 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 456663 455679999999999999999999999999999999999999999999999999999775
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.13 E-value=7.1e-05 Score=72.51 Aligned_cols=73 Identities=5% Similarity=-0.012 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
+.+...+..|+..+....+|+.+++++|++.++++.+..|++..++++++++|+++..+++|.++.+.|+.+.
T Consensus 213 ~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 213 PAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 4444444455545667789999999999999999999999999999999999999999999999999999775
No 50
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.02 E-value=0.0027 Score=62.62 Aligned_cols=110 Identities=14% Similarity=0.051 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccChhHHH-HHHhhhHHHHHHHHHHHccccC---C----hhHHHHHHHHHHHHH
Q 016119 124 FILASVYVGLGIITAADCFLYSIGLRYLPVSTYS-IICASQLAFNSFFSFFFNKQTF---T----PYIINSLVLLTISSA 195 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~at-vl~~~~pift~l~s~i~~kek~---t----~~~i~si~l~~~Gv~ 195 (395)
.+.+...+..|++++.-|..+..+++|+.+|... +-..+|.+++.++..++++|-. + ..-..|+++.++|++
T Consensus 70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~ 149 (345)
T PRK13499 70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA 149 (345)
T ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence 4778888899999999999999999999888874 4457888999999999988654 2 345678889999998
Q ss_pred hhee----ccCCCCcccccccccchhhHHHHHHHHHHHHHHHH
Q 016119 196 LLVF----QNDSENKKGVLSKQKYAIGFICTVGASAGYGFQLS 234 (395)
Q Consensus 196 lv~~----~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~i 234 (395)
+.+. .+.+++.++. .+++.-.|+++++.|++.|+.|..
T Consensus 150 l~s~Ag~~k~~~~~~~~~-~~~~~~KGi~ialisgi~~~~f~~ 191 (345)
T PRK13499 150 IVGRAGQLKERKMGIKKA-EEFNLKKGLILAVMSGIFSACFSF 191 (345)
T ss_pred HHHHhhhhcccccccccc-cccchHhHHHHHHHHHHHHHHHHH
Confidence 8765 2211110000 223467899999999999999984
No 51
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=97.99 E-value=0.00022 Score=69.10 Aligned_cols=138 Identities=17% Similarity=0.238 Sum_probs=89.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHH
Q 016119 214 KYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVS 293 (395)
Q Consensus 214 ~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~ 293 (395)
+...|.++.+.+++.||...+..+.. .+ .++.++.++-..++.+.+++.+...++.+.... .++.....
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-------~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~---~~~~~~~~ 73 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-------VPADEILTHRVIWSFFFMVVLMSICRQWSYLKT---LIQTPQKI 73 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-------CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH---HHcCHHHH
Confidence 46789999999999999987776432 21 357788888888877655443333332211111 11111111
Q ss_pred HH--HHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 294 YV--MNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 294 ~~--~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
.. ...+..++.+..+..+. .+++...++++....|..+.++++++++|+++..+++|+++.+.|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~----~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 74 FMLAVSAVLIGGNWLLFIWAV----NNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----hcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 11 22222333344444443 35666677888888888899999999999999999999999999998765
No 52
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=97.99 E-value=3.2e-05 Score=74.36 Aligned_cols=72 Identities=11% Similarity=0.188 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
+.+......++..+....+|+.++++.|++.++.+.+++|++..++++++++|++++.+++|..+.++|+.+
T Consensus 209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 333333444444566778999999999999999999999999999999999999999999999999999876
No 53
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.92 E-value=0.00038 Score=65.81 Aligned_cols=138 Identities=20% Similarity=0.291 Sum_probs=85.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHH
Q 016119 217 IGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVM 296 (395)
Q Consensus 217 ~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~ 296 (395)
.|.++.+.|+++|+.-.++.+. ... .++.++.++-++++.+.+++.....++.+.........+........
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-------~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-------LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSL 73 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-------CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHH
Confidence 4889999999999998777654 222 36788889999888766544333333221110110101111111111
Q ss_pred HHHH--HHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 297 NLVW--TAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 297 ~l~~--~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
.+.+ .++.+..+..+. .+++...++++....|..+.++++++++|+++..+++|.++.+.|+.+..
T Consensus 74 ~~~g~~~~~~~~~~~~a~----~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 74 LLCGLLIGFNWWLFIWAV----NNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHHH----HcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 1111 222233333332 24555667777777788899999999999999999999999999988654
No 54
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.82 E-value=0.00042 Score=67.03 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc-ccChhHHHHHHhhhHHHHHHHHHHHccccCChhHH----HHHHHHHHHHHhhe
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLR-YLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYII----NSLVLLTISSALLV 198 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~-~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i----~si~l~~~Gv~lv~ 198 (395)
+..+..+..|++++..+.+|+.+.+ +.+++.++++.+..|+...+++++++||+.+++++ +|.++.+.|+.+++
T Consensus 209 ~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 209 YAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 3444555589998888899999999 99999999999999999999999999999999999 99999999998865
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.75 E-value=0.00033 Score=67.93 Aligned_cols=143 Identities=9% Similarity=-0.030 Sum_probs=88.4
Q ss_pred HHHHHHHHHHhhhHhhhhheecc-CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHH
Q 016119 54 IYALFVICGQAAATLLGRQYYDK-GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVG 132 (395)
Q Consensus 54 ~~~~~v~~~~s~~~ll~r~~~~~-g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 132 (395)
+..+...++++.+.++.|...++ +.++..+..+.+..+...++|..+.............+ ..... .....+...+.
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 225 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQ-AISGV-NVTKIYTVSLV 225 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHH-hhccc-CchHHHHHHHH
Confidence 33444455566666677654332 44555666676667777777654432210000000000 00000 00111221222
Q ss_pred HHH-HHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 133 LGI-ITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 133 ~Gl-~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
.++ .....|.+++.++++++++++++.....|++++++++++++|++|..++.|.++.+.|+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 332 223345677889999999999999999999999999999999999999999999999998753
No 56
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.66 E-value=0.00033 Score=59.49 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=57.8
Q ss_pred HHHH-HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHH--HccccCChhHHHHHHHHHHHHHhhe
Q 016119 133 LGII-TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFF--FNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 133 ~Gl~-~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i--~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
.|+. ++....+|+.+++..|+|.+.-+.+..++++.+.++. +++|++|+.++.|+++.++|+.++.
T Consensus 53 lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 53 LGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3444 3566789999999999999999989988888888885 8999999999999999999999875
No 57
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.66 E-value=0.00019 Score=68.89 Aligned_cols=69 Identities=17% Similarity=0.239 Sum_probs=61.0
Q ss_pred HHH-HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccC
Q 016119 134 GII-TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQND 202 (395)
Q Consensus 134 Gl~-~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~ 202 (395)
|++ ++.-....+.|+.|-|++.-+-+.+++.++.++++..++|||++..-.+|.+++++|..++..+..
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP 139 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP 139 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence 555 356677888999999999999999999999999999999999999999999999999977655543
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.64 E-value=0.0011 Score=65.93 Aligned_cols=64 Identities=9% Similarity=-0.069 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 134 GIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 134 Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
|+...+.|.+-+.+++.+++.++++..+..|+++.++++++++|++|..+++|.++++.|+.+.
T Consensus 283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 3333444444457999999999999999999999999999999999999999999999999874
No 59
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.58 E-value=0.0019 Score=62.59 Aligned_cols=75 Identities=8% Similarity=-0.040 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 124 FILASVYVGLGIIT-AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~-~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
.+.+...+.+|++. +....+|+.++++.+++.++++..+.|++..++++++++|+++..+++|.++.++|+.+..
T Consensus 211 ~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 211 MTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHh
Confidence 35555555667663 5667799999999999999999999999999999999999999999999999999998753
No 60
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.52 E-value=0.0021 Score=53.00 Aligned_cols=50 Identities=16% Similarity=0.351 Sum_probs=42.4
Q ss_pred hhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccch
Q 016119 323 FSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLD 372 (395)
Q Consensus 323 ~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~ 372 (395)
....+..+.|+++.++++++|+|+++..+++|.++++.|+++..+++...
T Consensus 62 ~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 62 LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence 44456666777899999999999999999999999999999998876543
No 61
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.40 E-value=0.0011 Score=55.53 Aligned_cols=63 Identities=13% Similarity=0.238 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhhccccChhHHHHH-HhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 136 ITAADCFLYSIGLRYLPVSTYSII-CASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 136 ~~~~~~~l~~~sl~~~s~s~atvl-~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
+++...+++..+++++|.+++-.+ .....+.+++.++++++|++|+.++.++.+.++|++++-
T Consensus 39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhh
Confidence 345667888999999999998655 578999999999999999999999999999999998864
No 62
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.38 E-value=0.0013 Score=54.01 Aligned_cols=61 Identities=15% Similarity=0.051 Sum_probs=53.0
Q ss_pred HHHHHHHHHhhccccChhHH-HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 137 TAADCFLYSIGLRYLPVSTY-SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 137 ~~~~~~l~~~sl~~~s~s~a-tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
++...++...+++.+|++++ ++-.....+.+++.++++++|++++.++.++.+.+.|++.+
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 35556778899999999987 55566778889999999999999999999999999999875
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.33 E-value=0.0073 Score=57.14 Aligned_cols=75 Identities=15% Similarity=0.237 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 124 FILASVYVGLGIITA-ADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~~-~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
.+.+......|++.. ....+|+.+++..+++..+.+..+.|++..++++++++|+++.+++.|+.+.+.|+.+..
T Consensus 211 ~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 211 SRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 456667777777754 467899999999999999999999999999999999999999999999999999998753
No 64
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.26 E-value=0.0017 Score=52.80 Aligned_cols=60 Identities=13% Similarity=0.223 Sum_probs=52.7
Q ss_pred HHHHHHHHhhccccChhHH-HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 138 AADCFLYSIGLRYLPVSTY-SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~a-tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
.....+...+++++|++++ ++-...-.+-+++.++++++|+++..+++++.+.++|++.+
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 4555677899999999987 66667777889999999999999999999999999999875
No 65
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.22 E-value=0.0023 Score=52.76 Aligned_cols=61 Identities=20% Similarity=0.272 Sum_probs=53.4
Q ss_pred HHHHHHHHhhccccChhHHHHH-HhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 138 AADCFLYSIGLRYLPVSTYSII-CASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~atvl-~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
+....++..+++.+|++++--+ .....+.+++.++++++|++++.++.++.+.++|++++-
T Consensus 41 ~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 41 CASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4556677899999999998655 557888899999999999999999999999999999863
No 66
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.21 E-value=0.0026 Score=52.00 Aligned_cols=60 Identities=17% Similarity=0.151 Sum_probs=52.5
Q ss_pred HHHHHHHHhhccccChhHH-HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 138 AADCFLYSIGLRYLPVSTY-SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~a-tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
+...++...+++.+|++++ ++-.....+.+.+.++++++|++++.++.++.+.+.|++.+
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 4556777899999999987 55556888889999999999999999999999999999875
No 67
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.19 E-value=0.00022 Score=65.96 Aligned_cols=157 Identities=21% Similarity=0.166 Sum_probs=107.3
Q ss_pred HHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHH
Q 016119 61 CGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAAD 140 (395)
Q Consensus 61 ~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~ 140 (395)
++|-+.+++.+. -||. |.-++.-.+.|..+..+..+++.. |..+.+.+...+..|++++.-
T Consensus 12 l~WGsip~v~~k---~GG~-p~qQ~lGtT~GALifaiiv~~~~~---------------p~~T~~~~iv~~isG~~Ws~G 72 (288)
T COG4975 12 LGWGSIPLVANK---FGGK-PYQQTLGTTLGALIFAIIVFLFVS---------------PELTLTIFIVGFISGAFWSFG 72 (288)
T ss_pred HHhcccceeeee---cCCC-hhHhhhhccHHHHHHHHHHheeec---------------CccchhhHHHHHHhhhHhhhh
Confidence 445555555432 2444 444777777777766555554321 115567888888999999888
Q ss_pred HHHHHhhccccChhHHHHH-HhhhHHHHHHHHHHHccccCChhHH----HHHHHHHHHHHhheeccCCCCcccccccccc
Q 016119 141 CFLYSIGLRYLPVSTYSII-CASQLAFNSFFSFFFNKQTFTPYII----NSLVLLTISSALLVFQNDSENKKGVLSKQKY 215 (395)
Q Consensus 141 ~~l~~~sl~~~s~s~atvl-~~~~pift~l~s~i~~kek~t~~~i----~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~ 215 (395)
+..-+-|.++..+|.+.=+ ..+|.+=+.+++++.++|..+..+. .++++.++|+.+-+..+..+... + +.++.
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~-~-~~~n~ 150 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE-E-NPSNL 150 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc-c-ChHhh
Confidence 8888899999988887543 4578888999999999999988765 46667777877644333211111 1 22345
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 016119 216 AIGFICTVGASAGYGFQLSLTQL 238 (395)
Q Consensus 216 ~~G~ll~L~Aa~~~aly~il~~~ 238 (395)
-.|+...+.|.+.|-.|.++.|.
T Consensus 151 kkgi~~L~iSt~GYv~yvvl~~~ 173 (288)
T COG4975 151 KKGIVILLISTLGYVGYVVLFQL 173 (288)
T ss_pred hhheeeeeeeccceeeeEeeecc
Confidence 68999999999999999877654
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.10 E-value=0.0077 Score=57.32 Aligned_cols=112 Identities=16% Similarity=0.086 Sum_probs=78.3
Q ss_pred HHHHHHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHH
Q 016119 57 LFVICGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGII 136 (395)
Q Consensus 57 ~~v~~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~ 136 (395)
+.--+++..+..+-|+...+ +|-..+-|..|..+-...+.+... +. ...|..+.-+..|++
T Consensus 144 l~stigy~~Y~~~~~~~~~~----~~~~~lPqaiGm~i~a~i~~~~~~---~~------------~~~k~~~~nil~G~~ 204 (269)
T PF06800_consen 144 LISTIGYWIYSVIPKAFHVS----GWSAFLPQAIGMLIGAFIFNLFSK---KP------------FFEKKSWKNILTGLI 204 (269)
T ss_pred HHHHHHHHHHHHHHHhcCCC----hhHhHHHHHHHHHHHHHHHhhccc---cc------------ccccchHHhhHHHHH
Confidence 33356666677777764332 344555666666554433333221 10 111233455668999
Q ss_pred HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHH
Q 016119 137 TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSL 187 (395)
Q Consensus 137 ~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si 187 (395)
++..|.+|..|.+..-++++-.+.++.++...+.+.+++||+=+++++...
T Consensus 205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~ 255 (269)
T PF06800_consen 205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT 255 (269)
T ss_pred HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence 999999999999999999999999999999999999999999999876543
No 69
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.77 E-value=0.054 Score=51.70 Aligned_cols=139 Identities=17% Similarity=0.188 Sum_probs=79.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHH
Q 016119 215 YAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSY 294 (395)
Q Consensus 215 ~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~ 294 (395)
...|++++++|.+.||+.-.+.+. .++ .+..++..+-..++.+..++.+...+.++.+.+ ..+......
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kl-l~~-------~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~---~~~~p~~~~ 73 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKL-LEP-------LPATEILAHRVIWSFPFMLALLFLLRQWRELKQ---LLKQPKTLL 73 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHH-Hcc-------CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---HHhCcHHHH
Confidence 456999999999999986544432 222 245566666666666555554555555554432 222222222
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhh-HHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh
Q 016119 295 VMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLP-VVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 295 ~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~p-va~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~ 367 (395)
...+....++.+. .+-+.. +.....+-++ ++..-.| +.+++|.++|+|+++..|+++.++..+|+..-.+
T Consensus 74 ~~~l~a~li~~nW-~lfiWA-vn~g~~leaS-LGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 74 MLALTALLIGLNW-WLFIWA-VNNGHVLEAS-LGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHH-HHhhee-cCCCchhHHH-hHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 2222222222221 111111 1111111222 2333345 5778999999999999999999999999987664
No 70
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.68 E-value=0.01 Score=49.71 Aligned_cols=40 Identities=13% Similarity=0.368 Sum_probs=34.4
Q ss_pred hhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 330 VGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 330 ~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
+....+.+.++++|||++++.+++|+.+++.|++..+...
T Consensus 66 iG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 66 IGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 4455678899999999999999999999999999886544
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.58 E-value=0.043 Score=53.32 Aligned_cols=139 Identities=15% Similarity=0.139 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhhhHhhhhheec-cCCCccchHhHHHhhchhHHhhhHhhhc-ccCCchhhhccccCCCCCchHHHHHH
Q 016119 52 LGIYALFVICGQAAATLLGRQYYD-KGGNSNWLATLVQLAGFPILLPYYCCIN-ISTPFVQLQRKIKIKPPNSFFILASV 129 (395)
Q Consensus 52 ~~~~~~~v~~~~s~~~ll~r~~~~-~g~~~~~~~t~~~~~~~~~ll~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~ 129 (395)
+...+++-++..+......+..++ .+-+...+..+.+..+.|+.++...... .+.++. . + ...++| .....+..
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-~-~-f~~~~p-~~~~~l~~ 230 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSA-I-R-FISAHP-SVLLYLLL 230 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHH-H-H-HHHHhH-HHHHHHHH
Confidence 444455555666666666654444 4556667777888888888776554411 110110 0 0 001122 12222233
Q ss_pred HHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 130 YVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 130 ~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
...++. .-+...+.-.+..++-+.+++..+.-+++.+++++++++++++.+|.|+++.+.|..+-
T Consensus 231 ~s~~~~---~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 231 FSLTGA---LGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHH---HHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 333333 33344455678888888999999999999999999999999999999999999999773
No 72
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.54 E-value=0.0081 Score=47.93 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhccccChhHH-HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHH
Q 016119 137 TAADCFLYSIGLRYLPVSTY-SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLL 190 (395)
Q Consensus 137 ~~~~~~l~~~sl~~~s~s~a-tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~ 190 (395)
++....++..+++++|.+++ .+......+.+.+.++++++|++|..++.++.+.
T Consensus 39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 35666889999999999998 5556789999999999999999999999998763
No 73
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=96.50 E-value=0.013 Score=49.70 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHH--hhccccchhHHHHHHHHHHHHHHHHHh
Q 016119 295 VMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAV--VFFRDKMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 295 ~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~sv--i~f~E~lt~~~~iG~~lil~G~~~~~~ 367 (395)
+..++..++++..|...+..... + .-..+. +.......+.++ ++|||++++.+++|+++|+.|+++...
T Consensus 52 ~lgl~~~~la~~~w~~aL~~~~l--s-~Ayp~~-sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~ 122 (129)
T PRK02971 52 LLGLAGYALSMLCWLKALRYLPL--S-RAYPLL-SLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINL 122 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCc--H-HHHHHH-HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 45555666666665554432211 1 111111 222234455555 489999999999999999999999764
No 74
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.34 E-value=0.044 Score=45.15 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 296 MNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 296 ~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
..++..++++..+...+..+. .+ .-..+-+.+....+.+.++++|+|++++.+++|+.+++.|++..+...
T Consensus 35 ~~~~~~~~sf~~l~~al~~ip--l~-iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIP--TG-IAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCC--ch-hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 344455555554444443321 11 112233334556678899999999999999999999999999986443
No 75
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.17 E-value=0.014 Score=48.20 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=52.8
Q ss_pred HHHHHHHHhhccccChhHHHHHH-hhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 138 AADCFLYSIGLRYLPVSTYSIIC-ASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~atvl~-~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
-..+..|++.+...|.|.+.-+. +++.+||++.++++.+|..+++.+.|+++.+.|+.+
T Consensus 52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34467888999999999998885 899999999999999999999999999999999865
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=96.12 E-value=0.12 Score=42.54 Aligned_cols=37 Identities=16% Similarity=0.315 Sum_probs=32.3
Q ss_pred hhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHH
Q 016119 330 VGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFL 366 (395)
Q Consensus 330 ~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~ 366 (395)
+....+.+.++++|||++++.+++|+.+++.|++..+
T Consensus 71 iG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 71 FGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4445678899999999999999999999999998764
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.11 E-value=0.066 Score=43.60 Aligned_cols=71 Identities=11% Similarity=0.279 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhh
Q 016119 295 VMNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQ 368 (395)
Q Consensus 295 ~~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~ 368 (395)
...++...+++.+....+..+. .+ .-..+-+-.....+.+.++++|+|++++.+++|+.+++.|++..+..
T Consensus 34 il~~v~~~~sf~~Ls~alk~ip--vg-vAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIP--LG-VAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCc--hH-HHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 3444555555544444443321 11 11233344555678889999999999999999999999999987654
No 78
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.02 E-value=0.096 Score=42.78 Aligned_cols=69 Identities=7% Similarity=0.165 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHhhhhheeeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHh
Q 016119 296 MNLVWTAICWQIFSIGSVGLISETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLY 367 (395)
Q Consensus 296 ~~l~~~~i~~~~~~~~~~g~~~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~ 367 (395)
..++..++++.+....+..+. .+ .-..+-..+....+.+.++++|+|++++.+++|+.+++.|++..+.
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip--~g-vaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLP--VG-TAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCC--cH-hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 334455555555454443321 11 1223334455567888999999999999999999999999998754
No 79
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=95.96 E-value=0.071 Score=52.58 Aligned_cols=129 Identities=15% Similarity=0.090 Sum_probs=87.1
Q ss_pred HHHhhhHhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHH
Q 016119 61 CGQAAATLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAAD 140 (395)
Q Consensus 61 ~~~s~~~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~ 140 (395)
+.++.+.++.+.... ..++..+......+|+++..+...+..++ ..+. -+ .+.+.....+...+.....
T Consensus 178 ~lya~~nV~~E~~v~-~~~~~~~lg~~Glfg~ii~~iq~~ile~~--~i~~-------~~-w~~~~~~~~v~~~~~lf~~ 246 (334)
T PF06027_consen 178 ILYAVSNVLEEKLVK-KAPRVEFLGMLGLFGFIISGIQLAILERS--GIES-------IH-WTSQVIGLLVGYALCLFLF 246 (334)
T ss_pred HHHHHHHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHHheehh--hhhc-------cC-CChhhHHHHHHHHHHHHHH
Confidence 334444455544333 34566777777778888877655554321 1100 01 2234444444444443444
Q ss_pred HHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 141 CFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 141 ~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
..+....+++.++....+=..+..++.++++++++++++++..+.|.++.++|.++....
T Consensus 247 y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 247 YSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 456677889999999988888999999999999999999999999999999999885443
No 80
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.89 E-value=0.04 Score=45.46 Aligned_cols=36 Identities=14% Similarity=0.206 Sum_probs=32.1
Q ss_pred hhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 330 VGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 330 ~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
+.+..+.+.|+++|||++++.+++|..+++.|++..
T Consensus 72 l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 72 LNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 455668889999999999999999999999998765
No 81
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.87 E-value=0.13 Score=50.80 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=60.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHH---HH-hhhHHHHHHHHHHHccccCC------hhHHHHHHHHH
Q 016119 122 SFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSI---IC-ASQLAFNSFFSFFFNKQTFT------PYIINSLVLLT 191 (395)
Q Consensus 122 ~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atv---l~-~~~pift~l~s~i~~kek~t------~~~i~si~l~~ 191 (395)
...|....+++.|+++...+.+|..|-...+++.+.+ ++ ++..++..+.+. ++||+=+ +..+.++++.+
T Consensus 255 ~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI 333 (345)
T PRK13499 255 LLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVII 333 (345)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHH
Confidence 3457778888999999999999999998887666655 77 666677777777 5999887 66678888888
Q ss_pred HHHHhhee
Q 016119 192 ISSALLVF 199 (395)
Q Consensus 192 ~Gv~lv~~ 199 (395)
+|.++++.
T Consensus 334 ~g~~lig~ 341 (345)
T PRK13499 334 LAANIVGL 341 (345)
T ss_pred HHHHHHhh
Confidence 88887754
No 82
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.38 E-value=0.078 Score=49.67 Aligned_cols=72 Identities=22% Similarity=0.284 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHH
Q 016119 124 FILASVYVGLGIIT-AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSA 195 (395)
Q Consensus 124 ~k~~~~~~~~Gl~~-~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~ 195 (395)
...+......|++. +.-..+-..+++.+|..++.++.+.-|++-++.++++++|++|..+|.++...+.+.+
T Consensus 206 p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 206 PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 35666666777774 3334566889999999999999999999999999999999999999999998876654
No 83
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.17 E-value=0.053 Score=50.08 Aligned_cols=58 Identities=12% Similarity=0.124 Sum_probs=51.9
Q ss_pred HHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHH
Q 016119 138 AADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSA 195 (395)
Q Consensus 138 ~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~ 195 (395)
+....+-++.++|.+..+-++...+.++++.++++++++++++..++.|+.+.+.|+.
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~ 220 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeE
Confidence 3445667889999999999999999999999999999999999999999999988764
No 84
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=94.30 E-value=0.22 Score=48.44 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.0
Q ss_pred hhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 330 VGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 330 ~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
+..+...+++..+++|+++...++|+.+++.|..+.....
T Consensus 85 ~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 85 LSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred hhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 4456788999999999999999999999999998765433
No 85
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=94.16 E-value=0.13 Score=48.62 Aligned_cols=56 Identities=9% Similarity=0.137 Sum_probs=48.2
Q ss_pred eechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccchh
Q 016119 318 ETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLDD 373 (395)
Q Consensus 318 ~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~~ 373 (395)
+.++..-.++...+++.++++++++++.+++..||++..+...|+.+..+....+.
T Consensus 40 ~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~ 95 (244)
T PF04142_consen 40 YLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS 95 (244)
T ss_pred hCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence 45666667777888999999999999999999999999999999999877666553
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.12 E-value=1.2 Score=38.20 Aligned_cols=104 Identities=21% Similarity=0.203 Sum_probs=65.5
Q ss_pred ccchHhHHHh-hchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHH
Q 016119 80 SNWLATLVQL-AGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSI 158 (395)
Q Consensus 80 ~~~~~t~~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atv 158 (395)
+++.+++..+ .|+..+....++.+++ +.+. ..+.| +.... -|++.+....+...+...+.++..++
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~----~~~~p----~w~~l---GG~lG~~~V~~~~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRP--SLAS----LSSVP----WWAYL---GGLLGVFFVLSNIILVPRLGAALTTI 95 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccc--ccch----hccCC----hHHhc---cHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 3555555555 7777776655554332 1100 01122 22222 35554455556667888888777755
Q ss_pred H-HhhhHHHHHHHHHH----HccccCChhHHHHHHHHHHHHHh
Q 016119 159 I-CASQLAFNSFFSFF----FNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 159 l-~~~~pift~l~s~i----~~kek~t~~~i~si~l~~~Gv~l 196 (395)
+ ..-|.+...+++.+ .-|++++++|+.|++++++|+.+
T Consensus 96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 4 45677778888886 57899999999999999999864
No 87
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=93.27 E-value=0.9 Score=41.96 Aligned_cols=128 Identities=18% Similarity=0.083 Sum_probs=82.0
Q ss_pred HhhhHhhhhheecc-CCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHH
Q 016119 63 QAAATLLGRQYYDK-GGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADC 141 (395)
Q Consensus 63 ~s~~~ll~r~~~~~-g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~ 141 (395)
.+..++.+|.--+. .........|-+..+.|+++..-+++..+.+.. . . .. ...+.+...+..|+...+..
T Consensus 167 saafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n-~-a-----nn-l~~d~l~am~ISgl~svgiS 238 (309)
T COG5070 167 SAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN-L-A-----NN-LSVDSLMAMFISGLCSVGIS 238 (309)
T ss_pred HHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch-h-h-----cC-CChHHHHHHHHHHHHHhhhh
Confidence 33444444433222 334455667777789998877555543332221 0 0 11 22344455556777766778
Q ss_pred HHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 142 FLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 142 ~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
++..|.++-++.++++++..++-.-.++-+.+++.++.++.++.++++.++.+++-+
T Consensus 239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999888877777777777777777777777776666555433
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=92.54 E-value=5.3 Score=34.17 Aligned_cols=130 Identities=12% Similarity=0.076 Sum_probs=66.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhhhcchhHHHHH-
Q 016119 218 GFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFVSREWMGLNREMEAYQLGKVSYVM- 296 (395)
Q Consensus 218 G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~~~~~~~l~~~~~~~~~~~~~~~~- 296 (395)
..++++.++++-++...+..++.++. .+++.-.+.....+++...+..++.++. .. +....-.+++++
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~----~~~~~~p~w~~lG 70 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKAL------GSPLVASFISFGVGFILLLIILLITGRP-SL----ASLSSVPWWAYLG 70 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh------CccHHHHHHHHHHHHHHHHHHHHHhccc-cc----chhccCChHHhcc
Confidence 35677888888888877777776663 2345555555566776666555554432 11 122221222222
Q ss_pred HHHHHHHH-HHHHHHhhhhheeeechhhhhhhhhhhhh-HHHHHHHh-hc---cccchhHHHHHHHHHHHHHHH
Q 016119 297 NLVWTAIC-WQIFSIGSVGLISETSSLFSNAISVVGLP-VVPVLAVV-FF---RDKMHGLKVIAMVLAIWGFFS 364 (395)
Q Consensus 297 ~l~~~~i~-~~~~~~~~~g~~~~~ssl~~sv~~~~~~p-va~i~svi-~f---~E~lt~~~~iG~~lil~G~~~ 364 (395)
.+++.... ...+... ..+......+...... .+.+++.+ .| +.++++.+++|.++++.|+.+
T Consensus 71 G~lG~~~V~~~~~~vp------~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 71 GLLGVFFVLSNIILVP------RLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHhh------hhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 12221111 1111111 1222222222222222 34445554 22 477999999999999999863
No 89
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=92.04 E-value=0.35 Score=47.34 Aligned_cols=139 Identities=15% Similarity=0.046 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHhhhHhhhhheec-cCC--CccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHH
Q 016119 52 LGIYALFVICGQAAATLLGRQYYD-KGG--NSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILAS 128 (395)
Q Consensus 52 ~~~~~~~v~~~~s~~~ll~r~~~~-~g~--~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 128 (395)
..++...-.++.+...++.+.... +|. |+.-+.-+.--.....+++|+.......... - ....+ .....+.
T Consensus 164 G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~-~----~~~~~-~~~~~~~ 237 (316)
T KOG1441|consen 164 GFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFV-G----FLTAP-WFVTFLI 237 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhccccee-e----eeccc-cchhhHH
Confidence 445555556666677777765543 333 3333333333345555553554322111110 0 01112 1122222
Q ss_pred HHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 129 VYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 129 ~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
. ....++..+.|..-++.+..+++-++++.....-+++...++++++++.|+.+..|..++++|+.+-
T Consensus 238 ~-~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 238 L-LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLY 305 (316)
T ss_pred H-HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHH
Confidence 2 2233554566888889999999999999999999999999999999999999999999999999874
No 90
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=92.00 E-value=0.056 Score=50.97 Aligned_cols=46 Identities=9% Similarity=0.273 Sum_probs=38.2
Q ss_pred hhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhcc
Q 016119 325 NAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNY 370 (395)
Q Consensus 325 sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~ 370 (395)
.++....|.++++++|++++|+.+....+|..+.+.|+++......
T Consensus 127 ~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpF 172 (346)
T KOG4510|consen 127 VVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPF 172 (346)
T ss_pred EEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCc
Confidence 3444555667999999999999999999999999999988765443
No 91
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.74 E-value=0.78 Score=43.50 Aligned_cols=25 Identities=16% Similarity=0.141 Sum_probs=21.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccch
Q 016119 348 HGLKVIAMVLAIWGFFSFLYQNYLD 372 (395)
Q Consensus 348 t~~~~iG~~lil~G~~~~~~~~~~~ 372 (395)
.+.+.+|.+++++|..++..-|.+.
T Consensus 115 ~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 115 PWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hHHHHHHHHHHHHHHHheeeecCCC
Confidence 4789999999999999998866554
No 92
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=91.35 E-value=0.99 Score=44.72 Aligned_cols=140 Identities=13% Similarity=0.122 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhheeccCC---CccchHhHHHhhchhHHhhhHhhhcc-cCCchhhhccccCCCCCchHH
Q 016119 50 IRLGIYALFVICGQAAATLLGRQYYDKGG---NSNWLATLVQLAGFPILLPYYCCINI-STPFVQLQRKIKIKPPNSFFI 125 (395)
Q Consensus 50 ~~~~~~~~~v~~~~s~~~ll~r~~~~~g~---~~~~~~t~~~~~~~~~ll~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k 125 (395)
.++-+..++-...++.+..+.|.--++.| +-+.+-.++..+.+.++||++++... +..+-+. ++. .
T Consensus 246 llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~l-----P~~-----~ 315 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL-----PSS-----T 315 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC-----CCC-----c
Confidence 55666666666777777777765544443 33555666666777777876654322 1111101 111 1
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhee
Q 016119 126 LASVYVGLGII-TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVF 199 (395)
Q Consensus 126 ~~~~~~~~Gl~-~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~ 199 (395)
.+...+..|++ ....-++|.+|.-.+++-++++=.+.+....++...++.++++|+..++|-+..++|-+++..
T Consensus 316 q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 316 QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNI 390 (416)
T ss_pred eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheec
Confidence 22222333444 256678999999999999999999999999999999999999999999999999999887643
No 93
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=90.69 E-value=5.3 Score=39.34 Aligned_cols=111 Identities=14% Similarity=0.093 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHH-HHHHhhhHHHHHHHHHHHcc-------ccCChhHHHHHHHHHHHHHh
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTY-SIICASQLAFNSFFSFFFNK-------QTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~a-tvl~~~~pift~l~s~i~~k-------ek~t~~~i~si~l~~~Gv~l 196 (395)
+.+...+..|++++.-+..|-.+++|+-+|.- ++...+..++..++--++.+ ++-....+.+++++++|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 56777788999999999999999999877765 33346666666666555543 23345788999999999998
Q ss_pred heeccC---CCCcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 016119 197 LVFQND---SENKKGVLSKQKYAIGFICTVGASAGYGFQLSLT 236 (395)
Q Consensus 197 v~~~~~---~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~ 236 (395)
.+.... .+...+. ++.+.-.|.++++.|++..|.+.+-.
T Consensus 151 ~g~AG~~Ke~~~~~~~-~efn~~kGl~iAv~sGv~Sa~fn~g~ 192 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEA-KEFNFKKGLIIAVLSGVMSACFNFGL 192 (344)
T ss_pred HhHHHHhhhhhhccch-hhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 754321 1111111 22234689999999999998876543
No 94
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=90.59 E-value=0.68 Score=36.79 Aligned_cols=29 Identities=24% Similarity=0.408 Sum_probs=16.7
Q ss_pred hhhhHHHHHHHhhccccchhHHHHHHHHH
Q 016119 330 VGLPVVPVLAVVFFRDKMHGLKVIAMVLA 358 (395)
Q Consensus 330 ~~~pva~i~svi~f~E~lt~~~~iG~~li 358 (395)
+....+.+.++++|||++++.+++|+.+|
T Consensus 65 ~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 65 LGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 44556788999999999999999998875
No 95
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=88.74 E-value=0.34 Score=45.28 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHH----HHHHHHHHHHhhe
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIIN----SLVLLTISSALLV 198 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~----si~l~~~Gv~lv~ 198 (395)
|..++-...|++++..|..+..|-+...++++=-+.++..+...+-+.+++|||=|++++. ++++.++|.++++
T Consensus 207 K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 207 KYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 3444445579999999999989988888877777788888888999999999999999865 4445566665543
No 96
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=87.47 E-value=20 Score=35.47 Aligned_cols=52 Identities=15% Similarity=0.216 Sum_probs=45.0
Q ss_pred eechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 318 ETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 318 ~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
+.++.+-.+..-+++..++++.+++++++++..||...++...|+.+..++.
T Consensus 115 ~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~ 166 (345)
T KOG2234|consen 115 NLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPS 166 (345)
T ss_pred cCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccC
Confidence 4566677777888888999999999999999999999999999999987433
No 97
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.78 E-value=19 Score=31.37 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=32.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHH
Q 016119 215 YAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAILVGLFV 273 (395)
Q Consensus 215 ~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~li~l~~ 273 (395)
..+..++++.|+++-.+...+..++.+.. .+++--.+....++++.+.+..++
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~------~spl~As~isf~vGt~~L~~l~l~ 55 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYL------GSPLLASLISFLVGTVLLLILLLI 55 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHc------CChHHHHHHHHHHHHHHHHHHHHH
Confidence 35667778888888777776666655442 234444455556677666554444
No 98
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=85.00 E-value=5.5 Score=38.09 Aligned_cols=151 Identities=12% Similarity=0.166 Sum_probs=85.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhHhhh-hheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCch--h-hhccccC
Q 016119 42 RSRNYWRWIRLGIYALFVICGQAAATLLG-RQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFV--Q-LQRKIKI 117 (395)
Q Consensus 42 ~~~~~~~~~~~~~~~~~v~~~~s~~~ll~-r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~--~-~~~~~~~ 117 (395)
..+...||...+..+.+.++..+..++.. +.|...|-.......+..+...|..++ ..+.-+.. . ..++...
T Consensus 155 ~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf----~~~div~~~~~~~~se~~~ 230 (330)
T KOG1583|consen 155 AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLF----MGDDIVSHWRLAFKSESYL 230 (330)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHH----hcchHHHHHHHHhcCccee
Confidence 34567899998888888888888877766 555556777778888888777776332 11100000 0 0000000
Q ss_pred CCC--CchHHHHHHHHHHHHH--HHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHH
Q 016119 118 KPP--NSFFILASVYVGLGII--TAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTIS 193 (395)
Q Consensus 118 ~~~--~~~~k~~~~~~~~Gl~--~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~G 193 (395)
-+. ......+ .+.+.-++ ++..-..|..+-+..+.. .++....--.+..++|.+.++..+|++.|+|..+.+.|
T Consensus 231 ~p~~g~~vP~~~-~yLl~n~L~Qy~CikgVy~L~te~~sLT-VTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~G 308 (330)
T KOG1583|consen 231 IPLLGFKVPSMW-VYLLFNVLTQYFCIKGVYILTTETSSLT-VTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFG 308 (330)
T ss_pred ccccCccccHHH-HHHHHHHHHHHHHHHhhhhhhceecceE-EEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHH
Confidence 000 0111222 22211221 112222333333322222 23344666777889999999999999999999999999
Q ss_pred HHhhe
Q 016119 194 SALLV 198 (395)
Q Consensus 194 v~lv~ 198 (395)
..+.+
T Consensus 309 t~~fa 313 (330)
T KOG1583|consen 309 TLLFA 313 (330)
T ss_pred HHHHH
Confidence 98754
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=81.88 E-value=11 Score=36.76 Aligned_cols=114 Identities=16% Similarity=0.053 Sum_probs=73.7
Q ss_pred CccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHH
Q 016119 79 NSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSI 158 (395)
Q Consensus 79 ~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atv 158 (395)
|+..+..+-.....|.+....+++.... ..+.+. ++......+....+.|++..+.+++-++..+..|+.+.++
T Consensus 186 ~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~-----~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~ti 259 (314)
T KOG1444|consen 186 NKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNF-----DNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTI 259 (314)
T ss_pred cceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhc-----ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceee
Confidence 5555666666666666655444432211 110000 0001112333334445554566788889999999999999
Q ss_pred HHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhhe
Q 016119 159 ICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 159 l~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
.-.-+-.-+.+...++.++++++....|+.+.++|.++-.
T Consensus 260 vG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 260 VGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS 299 (314)
T ss_pred hhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence 9877777788999999999999999999999998887643
No 100
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=81.24 E-value=3.6 Score=34.01 Aligned_cols=38 Identities=8% Similarity=0.085 Sum_probs=30.5
Q ss_pred hhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 016119 327 ISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFS 364 (395)
Q Consensus 327 ~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~ 364 (395)
..++.-..+.+.++++.+|..+...++|+++++.|+.+
T Consensus 74 ~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 74 ANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34455567888898888888888899999999999754
No 101
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=79.24 E-value=3.3 Score=38.67 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 133 LGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 133 ~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
+++..++.+++-+.-..+-.+=+-+++..+--.||.+.|++++...++.++|.|-++.+.|..+
T Consensus 247 ~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 247 LAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 3444445566666777776666666777888999999999999999999999999999988765
No 102
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=78.78 E-value=28 Score=33.44 Aligned_cols=115 Identities=14% Similarity=0.063 Sum_probs=72.3
Q ss_pred eeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHH---HHHHHHHHHHHHHHhhcc
Q 016119 73 YYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYV---GLGIITAADCFLYSIGLR 149 (395)
Q Consensus 73 ~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~Gl~~~~~~~l~~~sl~ 149 (395)
.-.++.++..+..+....|+|+++.+..++-.-.+.... ...+| .|.....+ ..|.+ +....+--. +
T Consensus 213 m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~f----caehp---~~tyGy~~~~s~~gyl-G~~~VLalI--~ 282 (367)
T KOG1582|consen 213 MKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTF----CAEHP---VRTYGYAFLFSLAGYL-GIVFVLALI--K 282 (367)
T ss_pred HhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHH----HHhCc---HhHHHHHHHHHHHhHh-hHHHHHHHH--H
Confidence 333566778888888889999998877664221111000 01133 23333333 22332 221222211 2
Q ss_pred ccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 150 YLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 150 ~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
--.+.++..+...--..|.++|++++.+++|....-+..+...|+.+=
T Consensus 283 ~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 283 LFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLN 330 (367)
T ss_pred HhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhh
Confidence 235666677777788899999999999999999999999999999884
No 103
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=78.76 E-value=26 Score=34.62 Aligned_cols=23 Identities=4% Similarity=0.050 Sum_probs=17.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcc
Q 016119 348 HGLKVIAMVLAIWGFFSFLYQNY 370 (395)
Q Consensus 348 t~~~~iG~~lil~G~~~~~~~~~ 370 (395)
...-.+|.+++++|+.+.-+.-.
T Consensus 134 g~~vL~Gv~v~LiGIai~g~AG~ 156 (344)
T PF06379_consen 134 GQIVLLGVAVCLIGIAICGKAGS 156 (344)
T ss_pred chhhhhHHHHHHHHHHHHhHHHH
Confidence 44677899999999998866443
No 104
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=71.38 E-value=29 Score=33.70 Aligned_cols=56 Identities=13% Similarity=0.080 Sum_probs=47.2
Q ss_pred eeechhhhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccch
Q 016119 317 SETSSLFSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLD 372 (395)
Q Consensus 317 ~~~ssl~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~ 372 (395)
++++-..-.+.-+++..-+.+++.++.+.+.++.+.+-..+|-.|+.++.+.+..+
T Consensus 105 KyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 105 KYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 46665555666778877788999999999999999999999999999998887666
No 105
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=69.62 E-value=10 Score=35.72 Aligned_cols=81 Identities=20% Similarity=0.243 Sum_probs=46.5
Q ss_pred HHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHHHHHHHHHHHHHH
Q 016119 156 YSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTVGASAGYGFQLSL 235 (395)
Q Consensus 156 atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il 235 (395)
..+=...+.+++.++-+.--||| +......+.+...|+.++......+++ .++...+|.+++...-..||-=+..
T Consensus 72 N~~G~~ie~~Yi~~f~~ya~~k~-~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~lG~vc~~~nI~~~~sPL~~ 146 (243)
T KOG1623|consen 72 NGIGLVIETVYISIFLYYAPKKK-TVKIVLALVLGVIGLIILLTLLLFHDP----ERRVSVLGIVCAVFNISMFAAPLSV 146 (243)
T ss_pred ehhcHHHHHHHHHHHheecCchh-eeEeeehHHHHHHHHHHHHHHHhcCCc----ceeeeeeehhhhhhhHHhhhccHHh
Confidence 33333445555666666666666 555555666666666443222111111 2235789999999999999876655
Q ss_pred HHHHHH
Q 016119 236 TQLAFT 241 (395)
Q Consensus 236 ~~~~~~ 241 (395)
.+++.|
T Consensus 147 m~~VIk 152 (243)
T KOG1623|consen 147 IRKVIK 152 (243)
T ss_pred hhhhee
Confidence 554443
No 106
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=68.45 E-value=6.7 Score=31.88 Aligned_cols=56 Identities=20% Similarity=0.228 Sum_probs=47.3
Q ss_pred HHHHHhhccccChhHHHHH-HhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 141 CFLYSIGLRYLPVSTYSII-CASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 141 ~~l~~~sl~~~s~s~atvl-~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
+.+|++-++..|.+.+.=+ .++..+||++++..+--|..-++.+.|..+..+|+.+
T Consensus 66 Saly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 66 SALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred HHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 5788899999988887644 4568899999999998888889999999999988865
No 107
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=68.41 E-value=1.2e+02 Score=29.62 Aligned_cols=76 Identities=12% Similarity=-0.016 Sum_probs=57.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 122 SFFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 122 ~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
...+.+....+.|++..+.-..-+.=+..+|.=+-++..-..-+-+.+++.++++++++-..|.|+.++..|+.+=
T Consensus 238 ~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 238 LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 3445566666667764444445556666777766677667777889999999999999999999999999999873
No 108
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=62.71 E-value=1.4e+02 Score=28.04 Aligned_cols=21 Identities=24% Similarity=0.477 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 016119 253 LDMIIYTAFVASCAILVGLFV 273 (395)
Q Consensus 253 l~~~~~~~~~a~i~~li~l~~ 273 (395)
+++..|...+++++.++-++.
T Consensus 67 lRi~v~IlvIA~~V~~v~~~L 87 (231)
T PRK12405 67 IRIPIFVMIIASFVTVVQLLM 87 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666655544333
No 109
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.71 E-value=19 Score=28.93 Aligned_cols=33 Identities=9% Similarity=0.248 Sum_probs=28.0
Q ss_pred hHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q 016119 333 PVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSF 365 (395)
Q Consensus 333 pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~ 365 (395)
.+-+.++++.++|++.+..+.|..+++.|++..
T Consensus 81 ~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 81 AIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 345568999999999999999999999887654
No 110
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=53.66 E-value=63 Score=26.34 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=27.2
Q ss_pred hhHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q 016119 332 LPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFS 364 (395)
Q Consensus 332 ~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~ 364 (395)
..+-+.+++++++|++++....|.++++.+++.
T Consensus 73 L~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 73 LVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred hheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 344567889999999999999999999887643
No 111
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.93 E-value=4.8 Score=39.22 Aligned_cols=45 Identities=18% Similarity=0.375 Sum_probs=37.1
Q ss_pred hhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhccch
Q 016119 328 SVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQNYLD 372 (395)
Q Consensus 328 ~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~~~~ 372 (395)
+.+..+.+++++..+++|++++.-.+|++++++|-........++
T Consensus 97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 445567889999999999999999999999999987766554443
No 112
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=52.15 E-value=1.7e+02 Score=27.72 Aligned_cols=117 Identities=15% Similarity=0.070 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhh-hHHHHHHHHHH-Hc---cccC--ChhHHHHHHHHHHHHHhhe
Q 016119 126 LASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICAS-QLAFNSFFSFF-FN---KQTF--TPYIINSLVLLTISSALLV 198 (395)
Q Consensus 126 ~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~-~pift~l~s~i-~~---kek~--t~~~i~si~l~~~Gv~lv~ 198 (395)
...+.++-|.+++..|.+---.++.+-.+....+-++ +.+..-..+++ ++ +|.+ .+...+|++++++|.++..
T Consensus 54 f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~ 133 (254)
T PF07857_consen 54 FYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS 133 (254)
T ss_pred ceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence 3456666678887777777777888888887777665 33333333333 22 3333 4556677778888887654
Q ss_pred eccCCC-------C-------------cc-----ccc------ccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 016119 199 FQNDSE-------N-------------KK-----GVL------SKQKYAIGFICTVGASAGYGFQLSLTQLAFTK 242 (395)
Q Consensus 199 ~~~~~~-------~-------------~~-----~~~------~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k 242 (395)
.-+.+. + .+ +.+ ..++.+.|.++++.+++.||.-++=.+...++
T Consensus 134 fik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 134 FIKSEEKEPKKSSEETPLSIEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred eecCCCCCccccccccccccccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 311100 0 00 000 01246899999999999999977766655444
No 113
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=49.12 E-value=5.7 Score=37.99 Aligned_cols=47 Identities=13% Similarity=0.243 Sum_probs=0.0
Q ss_pred hhccccChhHHHHHHhhhHHHHHHHH-HHHcccc-CChhHHHHHHHHHH
Q 016119 146 IGLRYLPVSTYSIICASQLAFNSFFS-FFFNKQT-FTPYIINSLVLLTI 192 (395)
Q Consensus 146 ~sl~~~s~s~atvl~~~~pift~l~s-~i~~kek-~t~~~i~si~l~~~ 192 (395)
+-++-.+-+..+++.++..+.+.|+- .+++|+| +-+.-.+++++.++
T Consensus 42 iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi 90 (381)
T PF05297_consen 42 IIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMI 90 (381)
T ss_dssp -------------------------------------------------
T ss_pred HHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHH
Confidence 45555667777888887777744433 3334444 34445555555543
No 114
>PRK02237 hypothetical protein; Provisional
Probab=49.01 E-value=54 Score=26.82 Aligned_cols=44 Identities=5% Similarity=0.046 Sum_probs=34.4
Q ss_pred HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 157 SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 157 tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
..--....+...+..+.+.++|++++-++|..++++|+.++...
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 33334444556688999999999999999999999999876443
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=48.39 E-value=50 Score=26.93 Aligned_cols=41 Identities=5% Similarity=0.122 Sum_probs=33.6
Q ss_pred HhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 160 CASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 160 ~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
-....+...+..+.+.+++++++.+++..++++|+.++...
T Consensus 64 GGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 64 GGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 34445556788999999999999999999999999886443
No 116
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.97 E-value=2.1e+02 Score=24.90 Aligned_cols=108 Identities=21% Similarity=0.183 Sum_probs=60.4
Q ss_pred CCccchHhHHHh-hchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcccc-ChhH
Q 016119 78 GNSNWLATLVQL-AGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYSIGLRYL-PVST 155 (395)
Q Consensus 78 ~~~~~~~t~~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~-s~s~ 155 (395)
.+++...+...+ .|...+.....+ ..+.+..+. . .+.| +..+..-.+|.++...+. ....-+ .+.+
T Consensus 31 ~~spl~As~isf~vGt~~L~~l~l~-~~~~~~~a~-~---~~~p----wW~~~GG~lGa~~vt~s~---~l~p~lGa~~t 98 (150)
T COG3238 31 LGSPLLASLISFLVGTVLLLILLLI-KQGHPGLAA-V---ASAP----WWAWIGGLLGAIFVTSSI---LLAPRLGAATT 98 (150)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHH-hcCCCchhh-c---cCCc----hHHHHccchhhhhhhhhH---HhccchhHHHH
Confidence 356666776666 666666654444 322122110 0 1122 222222245554433332 222333 3344
Q ss_pred HHHHHhhhHHHHHHHHHHHc----cccCChhHHHHHHHHHHHHHhh
Q 016119 156 YSIICASQLAFNSFFSFFFN----KQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 156 atvl~~~~pift~l~s~i~~----kek~t~~~i~si~l~~~Gv~lv 197 (395)
..++...|.+..+++..+=+ ++++++.++.++++..+|+.++
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 45566788888887776644 5999999999999999996553
No 117
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=44.07 E-value=2.3e+02 Score=25.08 Aligned_cols=67 Identities=18% Similarity=0.298 Sum_probs=49.0
Q ss_pred HHHHHHHHccccCChhHHHHHHH-------HHHHHHhheeccCCCCcccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 016119 167 NSFFSFFFNKQTFTPYIINSLVL-------LTISSALLVFQNDSENKKGVLSKQKYAIGFICTVGASAGYGFQLSLTQLA 239 (395)
Q Consensus 167 t~l~s~i~~kek~t~~~i~si~l-------~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~aly~il~~~~ 239 (395)
+=.-..++.|..++..+..|+.+ +..|++++-.+. +++..-..+.+++|++.|++-+++..-.
T Consensus 85 VQf~Em~v~KtsP~LYr~LGIfLPLITTNCaVLgvaLln~~~----------~~~f~qsv~~gf~a~lGfslvmvlfA~i 154 (193)
T COG4657 85 VQFTEMVVRKTSPTLYRLLGIFLPLITTNCAVLGVALLNINE----------GHNFLQSVVYGFGAALGFSLVMVLFAAI 154 (193)
T ss_pred HHHHHHHHHccCHHHHHHHHHhhhhHhhchHHHHHHHHHhhh----------hhhHHHHHHHHhhhHhhHHHHHHHHHHH
Confidence 44567788899999999999984 455666653221 1235667888999999999988887776
Q ss_pred HHHh
Q 016119 240 FTKV 243 (395)
Q Consensus 240 ~~k~ 243 (395)
++|.
T Consensus 155 RER~ 158 (193)
T COG4657 155 RERL 158 (193)
T ss_pred HHHH
Confidence 6663
No 118
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=42.47 E-value=51 Score=27.89 Aligned_cols=40 Identities=8% Similarity=0.076 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHhh------ccchhhcccccCCCCCCCccCCC
Q 016119 352 VIAMVLAIWGFFSFLYQ------NYLDDYCKSKSNNGEAKQPLQAP 391 (395)
Q Consensus 352 ~iG~~lil~G~~~~~~~------~~~~~k~~~~~~~~~~~~~~~~~ 391 (395)
++|..+.+.|++....+ +.+..|+++.+..++++++.|+|
T Consensus 90 i~g~~~~~~G~~~i~l~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 135 (136)
T PF08507_consen 90 IIGLLLFLVGVIYIILGFFCPIKEPESMREQEIALSSQQDNEDDSD 135 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCchhcCcccccccccccccccCC
Confidence 34555555555433321 12223334444555555555554
No 119
>PF07330 DUF1467: Protein of unknown function (DUF1467); InterPro: IPR009935 This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.
Probab=41.82 E-value=37 Score=26.58 Aligned_cols=24 Identities=13% Similarity=0.019 Sum_probs=16.2
Q ss_pred cccccchhhHHHHHHHHHHHHHHH
Q 016119 39 TDNRSRNYWRWIRLGIYALFVICG 62 (395)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~v~~~ 62 (395)
..+|.+|+-+|..+....+..++.
T Consensus 45 ~~~~l~rk~~~TTiiaavi~~~~~ 68 (85)
T PF07330_consen 45 ANPRLKRKALITTIIAAVIFAIIY 68 (85)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHH
Confidence 667888888777766655555444
No 120
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=41.73 E-value=10 Score=34.49 Aligned_cols=47 Identities=30% Similarity=0.495 Sum_probs=37.3
Q ss_pred hhhhhhhhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 323 FSNAISVVGLPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 323 ~~sv~~~~~~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
-++-+..+-....-++++++++|++...+++..++.+.|++...|..
T Consensus 81 ~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 81 DASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred hhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 33444556667788899999999999999999999999988775533
No 121
>PF15102 TMEM154: TMEM154 protein family
Probab=41.51 E-value=23 Score=30.59 Aligned_cols=29 Identities=10% Similarity=0.059 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHhhccchhhcccccCCC
Q 016119 354 AMVLAIWGFFSFLYQNYLDDYCKSKSNNG 382 (395)
Q Consensus 354 G~~lil~G~~~~~~~~~~~~k~~~~~~~~ 382 (395)
+.++++..++++.+.|+++.|..+.++.+
T Consensus 68 LvlLLl~vV~lv~~~kRkr~K~~~ss~gs 96 (146)
T PF15102_consen 68 LVLLLLSVVCLVIYYKRKRTKQEPSSQGS 96 (146)
T ss_pred HHHHHHHHHHheeEEeecccCCCCccccc
Confidence 44445555666655555555444333333
No 122
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=41.46 E-value=34 Score=35.41 Aligned_cols=28 Identities=4% Similarity=-0.110 Sum_probs=22.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccchhh
Q 016119 347 MHGLKVIAMVLAIWGFFSFLYQNYLDDY 374 (395)
Q Consensus 347 lt~~~~iG~~lil~G~~~~~~~~~~~~k 374 (395)
++..|++.+.+++.|++++.+.++++++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~~~~~ 281 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPKGREA 281 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 7889999999999999888776654333
No 123
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=41.42 E-value=34 Score=27.84 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=24.9
Q ss_pred HHHHHHHHccccCChhHHHHHHHHHHHHHh
Q 016119 167 NSFFSFFFNKQTFTPYIINSLVLLTISSAL 196 (395)
Q Consensus 167 t~l~s~i~~kek~t~~~i~si~l~~~Gv~l 196 (395)
-+.++.+++||++++..+.|-++...++..
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 457889999999999999999888766544
No 124
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=38.42 E-value=1.1e+02 Score=24.99 Aligned_cols=44 Identities=9% Similarity=0.055 Sum_probs=34.7
Q ss_pred HHHHhhhHHHHHHHHHHHccccCChhHHHHHHHHHHHHHhheec
Q 016119 157 SIICASQLAFNSFFSFFFNKQTFTPYIINSLVLLTISSALLVFQ 200 (395)
Q Consensus 157 tvl~~~~pift~l~s~i~~kek~t~~~i~si~l~~~Gv~lv~~~ 200 (395)
..--....+...+..+..-+.+++++-+.|-.++++|+.++...
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 33344555667788899999999999999999999998776443
No 125
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=37.41 E-value=41 Score=32.33 Aligned_cols=115 Identities=11% Similarity=0.003 Sum_probs=63.7
Q ss_pred HhhhhheeccCCCccchHhHHHhhchhHHhhhHhhhcccCCchhhhccccCCCCCchHHHHHHHHHHHHHHHHHHHHHHh
Q 016119 67 TLLGRQYYDKGGNSNWLATLVQLAGFPILLPYYCCINISTPFVQLQRKIKIKPPNSFFILASVYVGLGIITAADCFLYSI 146 (395)
Q Consensus 67 ~ll~r~~~~~g~~~~~~~t~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~Gl~~~~~~~l~~~ 146 (395)
.+-.|-....-++..|..++-+..-..++..|..+...+-.+. . .++ +- ...+.|....+.|++...-++.-.+
T Consensus 201 aiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v---~-~~~-~l-~a~~Fw~~mtLsglfgF~mgyvTg~ 274 (347)
T KOG1442|consen 201 AIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV---V-GFP-HL-PAIKFWILMTLSGLFGFAMGYVTGW 274 (347)
T ss_pred HHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH---c-Ccc-cc-hHHHHHHHHHHHHHHHHHhhheeeE
Confidence 3334433333567899999998887777777777654432111 0 011 10 2456666666777765444555556
Q ss_pred hccccChhHHHHHHhhhHHHHHHHHHHHccccCChhHHHHH
Q 016119 147 GLRYLPVSTYSIICASQLAFNSFFSFFFNKQTFTPYIINSL 187 (395)
Q Consensus 147 sl~~~s~s~atvl~~~~pift~l~s~i~~kek~t~~~i~si 187 (395)
=++.+|+=+..+-.....+-=.+++..++.|.-+...|-+.
T Consensus 275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn 315 (347)
T KOG1442|consen 275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSN 315 (347)
T ss_pred EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeee
Confidence 66777776665544444444455555555555444444333
No 126
>PRK02237 hypothetical protein; Provisional
Probab=35.20 E-value=54 Score=26.85 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=31.5
Q ss_pred hHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 333 PVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 333 pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
..+.+..+.+-+.+++...++|..+++.|..+..+..
T Consensus 71 ~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 71 AGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3456778889999999999999999999998876654
No 127
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=33.01 E-value=3.7e+02 Score=24.31 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccc-----C-------hhHHHHHHhhhHHHHHHHHHHHccccC-------------
Q 016119 125 ILASVYVGLGIITAADCFLYSIGLRYL-----P-------VSTYSIICASQLAFNSFFSFFFNKQTF------------- 179 (395)
Q Consensus 125 k~~~~~~~~Gl~~~~~~~l~~~sl~~~-----s-------~s~atvl~~~~pift~l~s~i~~kek~------------- 179 (395)
+.+...+..|+....+...|..+...+ + ...+.++ ...|+...+..+.+.++|.
T Consensus 113 ~~~~lg~~~~~~~~~~~~~~laa~~~I~~~~~~~~~~~~~l~~y~~i-~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~ 191 (214)
T PF11139_consen 113 GAFWLGFVLGLANPKTMLPYLAAIAIIAASGLSPGTQVVALVVYCLI-ASLPALLPLLAYLVAPERAEPWLERLRSWLRR 191 (214)
T ss_pred hHHHHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 455555555555444445555554432 1 1122332 5666667777777777665
Q ss_pred ChhHHHHHHHHHHHHHhh
Q 016119 180 TPYIINSLVLLTISSALL 197 (395)
Q Consensus 180 t~~~i~si~l~~~Gv~lv 197 (395)
+.+.+.++++..+|+.++
T Consensus 192 ~~~~i~~~i~~i~G~~l~ 209 (214)
T PF11139_consen 192 HSRQILAVILLIVGALLL 209 (214)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 234455555666666554
No 128
>COG5454 Predicted secreted protein [Function unknown]
Probab=32.69 E-value=78 Score=24.49 Aligned_cols=35 Identities=11% Similarity=0.050 Sum_probs=19.0
Q ss_pred ccchhhHHHhhhccCCCCccccCCCCcccccchhhHHHHHH
Q 016119 13 AKVEEEKEAKLAVNNRNNLTVTDQPTTDNRSRNYWRWIRLG 53 (395)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 53 (395)
|.|+++||. +...-+.+++| ..++.+|.--|..++
T Consensus 25 g~Rtq~ee~-----dv~lGtv~sAP-~~p~~~R~vl~TT~~ 59 (89)
T COG5454 25 GVRTQDEEG-----DVTLGTVPSAP-ANPHLLRAVLRTTVA 59 (89)
T ss_pred cccchhhcC-----CCCCCcCCCCC-CCcchhhHHHHHHHH
Confidence 667777763 33333455555 555666655444443
No 129
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=32.15 E-value=53 Score=26.78 Aligned_cols=37 Identities=8% Similarity=0.033 Sum_probs=31.7
Q ss_pred hHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhhc
Q 016119 333 PVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQN 369 (395)
Q Consensus 333 pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~~ 369 (395)
..+.+-++.+-+++++...++|..+++.|..+..+..
T Consensus 69 ~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 69 VASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4466778888899999999999999999999887654
No 130
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=29.01 E-value=4.4e+02 Score=23.84 Aligned_cols=14 Identities=21% Similarity=0.410 Sum_probs=7.4
Q ss_pred HHHHHHHHccccCC
Q 016119 167 NSFFSFFFNKQTFT 180 (395)
Q Consensus 167 t~l~s~i~~kek~t 180 (395)
+++....++|+|++
T Consensus 189 i~~~~~~~lkkk~~ 202 (206)
T PF06570_consen 189 IAFALRFYLKKKYN 202 (206)
T ss_pred HHHHHHHHHHHHhC
Confidence 44445555566654
No 131
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=28.59 E-value=50 Score=31.87 Aligned_cols=37 Identities=11% Similarity=0.267 Sum_probs=32.7
Q ss_pred hhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhh
Q 016119 332 LPVVPVLAVVFFRDKMHGLKVIAMVLAIWGFFSFLYQ 368 (395)
Q Consensus 332 ~pva~i~svi~f~E~lt~~~~iG~~lil~G~~~~~~~ 368 (395)
+..+.+++.-+++.+++..||+|+..+.+|+++.-+.
T Consensus 123 iIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 123 IIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred hhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 4568889999999999999999999999999887654
No 132
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=28.20 E-value=1.1e+02 Score=25.36 Aligned_cols=50 Identities=12% Similarity=0.419 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhheecc---CCCccchHhHHHhhchhHHhhhHh
Q 016119 48 RWIRLGIYALFVICGQAAATLLGRQYYDK---GGNSNWLATLVQLAGFPILLPYYC 100 (395)
Q Consensus 48 ~~~~~~~~~~~v~~~~s~~~ll~r~~~~~---g~~~~~~~t~~~~~~~~~ll~~~~ 100 (395)
-|..+.+..++.++|...-.+=.-..+++ +..+.| ....+|+..++|.++
T Consensus 40 pwK~I~la~~Lli~G~~li~~g~l~~~~~i~~~~~~~~---~llilG~L~fIPG~Y 92 (115)
T PF05915_consen 40 PWKSIALAVFLLIFGTVLIIIGLLLFFGHIDGDRDRGW---ALLILGILCFIPGFY 92 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccc---hHHHHHHHHHhccHH
Confidence 47777777777777755433321222222 223333 223456666666554
No 133
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.72 E-value=1.3e+02 Score=24.23 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=25.5
Q ss_pred HHHHHHHccccCChhHHHHHHHHHHHHHhh
Q 016119 168 SFFSFFFNKQTFTPYIINSLVLLTISSALL 197 (395)
Q Consensus 168 ~l~s~i~~kek~t~~~i~si~l~~~Gv~lv 197 (395)
..||.+.+||++++..+.+-.+...|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 468899999999999999998888777653
No 134
>PF15471 TMEM171: Transmembrane protein family 171
Probab=26.82 E-value=76 Score=30.27 Aligned_cols=22 Identities=14% Similarity=0.374 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccc
Q 016119 350 LKVIAMVLAIWGFFSFLYQNYL 371 (395)
Q Consensus 350 ~~~iG~~lil~G~~~~~~~~~~ 371 (395)
.|++|-++++.|+..+...+-|
T Consensus 162 lQImGPlIVl~GLCFFVVAHvK 183 (319)
T PF15471_consen 162 LQIMGPLIVLVGLCFFVVAHVK 183 (319)
T ss_pred hhhhhhHHHHHhhhhhheeeee
Confidence 6899999999999998876644
No 135
>PF13347 MFS_2: MFS/sugar transport protein
Probab=25.82 E-value=5.9e+02 Score=25.31 Aligned_cols=18 Identities=17% Similarity=-0.025 Sum_probs=8.8
Q ss_pred HHccccCChhHHHHHHHH
Q 016119 173 FFNKQTFTPYIINSLVLL 190 (395)
Q Consensus 173 i~~kek~t~~~i~si~l~ 190 (395)
-.+.+|+.+++...+...
T Consensus 281 ~~l~~r~gk~~~~~~~~~ 298 (428)
T PF13347_consen 281 GRLSKRFGKKKVYIIGLL 298 (428)
T ss_pred HHHHHHccceeehhhhHH
Confidence 334455565555444433
No 136
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=25.59 E-value=70 Score=30.53 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=21.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccc
Q 016119 346 KMHGLKVIAMVLAIWGFFSFLYQNYL 371 (395)
Q Consensus 346 ~lt~~~~iG~~lil~G~~~~~~~~~~ 371 (395)
.+|..|+++..+++.|+.+..+.+++
T Consensus 234 ~ls~~Q~~sl~~i~~g~~~~~~~~~~ 259 (269)
T PRK12437 234 WLRIAQVISIPLIIIGIILIIYRRKK 259 (269)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 37999999999999999887665543
No 137
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=25.48 E-value=5.1e+02 Score=23.43 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=19.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhh
Q 016119 249 FRAVLDMIIYTAFVASCAILVGLFVSR 275 (395)
Q Consensus 249 ~~~~l~~~~~~~~~a~i~~li~l~~~~ 275 (395)
|...+++..|.+.+..++.++.++...
T Consensus 53 Fla~~qIiVYvGAI~VLflFvIMll~~ 79 (198)
T PRK06638 53 FLGVVQIIVYVGAVMVLFLFVVMMLDV 79 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556778888988887776666566543
No 138
>PF11023 DUF2614: Protein of unknown function (DUF2614); InterPro: IPR020912 This entry describes proteins of unknown function, which are thought to be membrane proteins.; GO: 0005887 integral to plasma membrane
Probab=24.90 E-value=63 Score=26.58 Aligned_cols=23 Identities=13% Similarity=0.131 Sum_probs=19.1
Q ss_pred cccCChhHHHHHHHHHHHHHhhe
Q 016119 176 KQTFTPYIINSLVLLTISSALLV 198 (395)
Q Consensus 176 kek~t~~~i~si~l~~~Gv~lv~ 198 (395)
+-|+++.+-.|+.+.++|.+++-
T Consensus 5 ~~KiN~~R~~al~lif~g~~vmy 27 (114)
T PF11023_consen 5 SSKINKIRTFALSLIFIGMIVMY 27 (114)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 45788899999999999997753
No 139
>PTZ00101 rhomboid-1 protease; Provisional
Probab=24.69 E-value=6.3e+02 Score=24.27 Aligned_cols=15 Identities=20% Similarity=0.268 Sum_probs=10.6
Q ss_pred hHHHHHHHHHHHHHH
Q 016119 123 FFILASVYVGLGIIT 137 (395)
Q Consensus 123 ~~k~~~~~~~~Gl~~ 137 (395)
.+|....++..|+..
T Consensus 138 ~~r~~ilYl~sGi~G 152 (278)
T PTZ00101 138 IVKIIILYFLTGIYG 152 (278)
T ss_pred hHHHHHHHHHHHHHH
Confidence 356777888888864
No 140
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=24.25 E-value=2.2e+02 Score=24.95 Aligned_cols=54 Identities=17% Similarity=0.157 Sum_probs=30.9
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHH
Q 016119 211 SKQKYAIGFICTVGASAGYGFQLSLTQLAFTKVIKRETFRAVLDMIIYTAFVASCAIL 268 (395)
Q Consensus 211 ~~~~~~~G~ll~L~Aa~~~aly~il~~~~~~k~~~~~~~~~~l~~~~~~~~~a~i~~l 268 (395)
+++++..|-.+.+.|.+..+.-..-.-.++++. .+ ..-+++++|.-+.++.+++
T Consensus 116 SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~---vt-l~GFTL~fWCeFtAsFLfF 169 (184)
T PF15108_consen 116 SRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQ---VT-LIGFTLMFWCEFTASFLFF 169 (184)
T ss_pred hhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcc---hh-hhhhHHHHHHHHHHHHHHH
Confidence 456788999999888776554222111222221 11 2446777887777666543
No 141
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=23.89 E-value=85 Score=21.33 Aligned_cols=8 Identities=13% Similarity=0.152 Sum_probs=3.9
Q ss_pred HHHHHHHh
Q 016119 360 WGFFSFLY 367 (395)
Q Consensus 360 ~G~~~~~~ 367 (395)
.|..+|.-
T Consensus 21 iGl~IyQk 28 (49)
T PF11044_consen 21 IGLSIYQK 28 (49)
T ss_pred HHHHHHHH
Confidence 44555543
No 142
>PRK02935 hypothetical protein; Provisional
Probab=23.81 E-value=50 Score=26.84 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=30.2
Q ss_pred ccccCChhHHHHHHHHHHHHHhheeccCCCCcccccccccchhhHHHHHHHHHHH
Q 016119 175 NKQTFTPYIINSLVLLTISSALLVFQNDSENKKGVLSKQKYAIGFICTVGASAGY 229 (395)
Q Consensus 175 ~kek~t~~~i~si~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~G~ll~L~Aa~~~ 229 (395)
..-|+++.+-.|+.+.++|.++.-.+-.-.++.-. -.-..++|+++.++|.+.|
T Consensus 5 ~ssKINkiRt~aL~lvfiG~~vMy~Giff~~~~~~-m~ifm~~G~l~~l~S~vvY 58 (110)
T PRK02935 5 YSNKINKIRTFALSLVFIGFIVMYLGIFFRESIII-MTIFMLLGFLAVIASTVVY 58 (110)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHHHHHHHHHHHHHHHH
Confidence 35678888999999999998775322211000000 0002356666666666555
No 143
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=21.36 E-value=90 Score=29.99 Aligned_cols=25 Identities=8% Similarity=0.099 Sum_probs=20.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccc
Q 016119 347 MHGLKVIAMVLAIWGFFSFLYQNYL 371 (395)
Q Consensus 347 lt~~~~iG~~lil~G~~~~~~~~~~ 371 (395)
++..|++...+++.|+.+..+.+++
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~~~ 270 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAYKL 270 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999999877665443
No 144
>KOG4193 consensus G protein-coupled receptors [Signal transduction mechanisms]
Probab=21.29 E-value=1.8e+02 Score=31.30 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccccChhHHHHHHhhhHHHHHHHHHHHcc
Q 016119 123 FFILASVYVGLGIITAADCFLYSIGLRYLPVSTYSIICASQLAFNSFFSFFFNK 176 (395)
Q Consensus 123 ~~k~~~~~~~~Gl~~~~~~~l~~~sl~~~s~s~atvl~~~~pift~l~s~i~~k 176 (395)
.+..+.+.+++|+.|++..+.|.-+..-.-.=+++++.++|=+|.+++-.++.+
T Consensus 516 ~~~~l~L~~lLGlTW~fgi~s~~~~~~~v~~YlFti~NalQG~fIFi~~cll~~ 569 (610)
T KOG4193|consen 516 IRSALALLFLLGLTWIFGIFSWLPGTSVVFAYLFTIFNALQGVFIFIFHCLLRK 569 (610)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhhHhhHhhhhhhH
Confidence 445667777889988777766665544444556789999999999999887754
Done!