Query 016123
Match_columns 394
No_of_seqs 358 out of 2287
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:00:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016123.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016123hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.9E-44 4.2E-49 365.7 29.6 362 9-389 22-415 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 5.2E-36 1.1E-40 273.5 25.2 247 13-259 1-250 (250)
3 KOG2504 Monocarboxylate transp 99.9 5.2E-25 1.1E-29 222.0 17.3 314 9-393 40-361 (509)
4 TIGR00890 2A0111 Oxalate/Forma 99.9 1.8E-24 3.8E-29 209.9 19.5 266 12-394 1-269 (377)
5 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.8E-22 3.9E-27 200.3 20.3 290 11-394 4-308 (412)
6 PRK11663 regulatory protein Uh 99.9 1.3E-21 2.8E-26 195.5 19.0 158 4-168 12-172 (434)
7 PRK09556 uhpT sugar phosphate 99.9 8.8E-22 1.9E-26 198.5 17.4 270 30-394 45-323 (467)
8 PRK09705 cynX putative cyanate 99.9 6.6E-21 1.4E-25 187.9 20.5 242 30-394 25-269 (393)
9 TIGR00892 2A0113 monocarboxyla 99.9 1.5E-20 3.2E-25 188.9 21.7 286 9-392 13-303 (455)
10 PLN00028 nitrate transmembrane 99.9 1.4E-20 3E-25 190.3 20.5 261 30-394 52-317 (476)
11 PRK03545 putative arabinose tr 99.9 7.5E-20 1.6E-24 180.0 22.1 260 11-394 5-270 (390)
12 PRK11551 putative 3-hydroxyphe 99.8 5.1E-20 1.1E-24 181.9 19.9 153 7-166 7-162 (406)
13 PRK12307 putative sialic acid 99.8 6.7E-20 1.5E-24 182.1 19.3 150 12-168 15-167 (426)
14 TIGR00891 2A0112 putative sial 99.8 1.2E-19 2.5E-24 178.2 20.3 172 9-187 6-182 (405)
15 COG2271 UhpC Sugar phosphate p 99.8 2.2E-20 4.7E-25 178.3 14.2 283 11-393 25-316 (448)
16 TIGR00893 2A0114 d-galactonate 99.8 7.5E-20 1.6E-24 178.0 17.8 264 31-394 11-280 (399)
17 TIGR00903 2A0129 major facilit 99.8 1E-19 2.2E-24 177.9 18.3 242 31-394 8-252 (368)
18 PRK11273 glpT sn-glycerol-3-ph 99.8 7.8E-20 1.7E-24 183.6 17.0 148 12-163 26-176 (452)
19 PRK03699 putative transporter; 99.8 2.9E-19 6.2E-24 176.2 20.2 151 10-167 2-155 (394)
20 TIGR00895 2A0115 benzoate tran 99.8 7.3E-20 1.6E-24 178.9 15.1 182 10-198 12-197 (398)
21 PRK10213 nepI ribonucleoside t 99.8 8.2E-19 1.8E-23 173.1 22.2 157 5-168 10-169 (394)
22 TIGR00887 2A0109 phosphate:H+ 99.8 4.6E-19 1E-23 180.3 20.8 190 12-202 13-233 (502)
23 TIGR00881 2A0104 phosphoglycer 99.8 1.2E-19 2.7E-24 175.9 15.9 129 30-165 11-141 (379)
24 TIGR00886 2A0108 nitrite extru 99.8 7.7E-19 1.7E-23 170.6 20.8 266 30-394 17-290 (366)
25 PRK14995 methyl viologen resis 99.8 3.4E-18 7.3E-23 173.7 25.4 314 12-394 3-324 (495)
26 PRK10406 alpha-ketoglutarate t 99.8 1.4E-18 3E-23 173.5 20.1 152 9-161 16-178 (432)
27 PRK15034 nitrate/nitrite trans 99.8 1.5E-18 3.1E-23 172.5 19.7 277 14-394 33-315 (462)
28 TIGR00894 2A0114euk Na(+)-depe 99.8 3.8E-19 8.3E-24 179.1 15.2 251 43-393 70-325 (465)
29 TIGR00712 glpT glycerol-3-phos 99.8 7.1E-19 1.5E-23 175.9 16.9 283 13-393 25-315 (438)
30 TIGR01299 synapt_SV2 synaptic 99.8 1.3E-18 2.8E-23 182.3 18.2 185 11-202 163-363 (742)
31 TIGR00879 SP MFS transporter, 99.8 1.7E-18 3.6E-23 173.1 18.1 163 33-199 47-222 (481)
32 TIGR00896 CynX cyanate transpo 99.8 2.8E-18 6.2E-23 166.5 18.7 241 31-393 17-260 (355)
33 PRK10091 MFS transport protein 99.8 8E-18 1.7E-22 165.2 21.3 130 31-167 20-151 (382)
34 PRK10642 proline/glycine betai 99.8 4.2E-18 9E-23 172.8 19.3 143 14-163 15-174 (490)
35 TIGR00898 2A0119 cation transp 99.8 5.1E-19 1.1E-23 179.9 11.9 162 30-201 105-271 (505)
36 COG2223 NarK Nitrate/nitrite t 99.8 2.8E-18 6.2E-23 164.0 15.2 270 9-394 8-283 (417)
37 TIGR00710 efflux_Bcr_CflA drug 99.8 7.3E-18 1.6E-22 164.6 18.5 129 32-167 23-153 (385)
38 COG2814 AraJ Arabinose efflux 99.8 5.8E-17 1.2E-21 156.4 23.6 261 9-391 7-273 (394)
39 PRK10077 xylE D-xylose transpo 99.8 9.5E-18 2.1E-22 169.2 18.4 187 13-199 10-220 (479)
40 TIGR00711 efflux_EmrB drug res 99.8 2.4E-17 5.2E-22 166.4 21.0 289 32-394 20-320 (485)
41 TIGR00897 2A0118 polyol permea 99.8 4E-17 8.7E-22 161.4 21.3 247 36-394 35-286 (402)
42 KOG0569 Permease of the major 99.8 1E-16 2.2E-21 159.0 23.1 273 39-394 44-334 (485)
43 PRK10504 putative transporter; 99.8 1.4E-16 3.1E-21 160.5 24.2 145 30-181 26-172 (471)
44 TIGR00885 fucP L-fucose:H+ sym 99.8 4.8E-17 1E-21 161.4 20.0 276 26-394 14-298 (410)
45 PRK03893 putative sialic acid 99.8 1.4E-16 2.9E-21 161.6 23.1 178 11-195 16-196 (496)
46 PRK10133 L-fucose transporter; 99.7 1.5E-16 3.2E-21 159.2 21.8 132 31-166 43-176 (438)
47 PRK11043 putative transporter; 99.7 7.8E-17 1.7E-21 159.0 19.5 148 14-168 6-155 (401)
48 PRK15402 multidrug efflux syst 99.7 6.4E-17 1.4E-21 160.0 18.7 153 8-167 6-161 (406)
49 PRK10473 multidrug efflux syst 99.7 1.4E-16 3.1E-21 156.7 20.5 128 32-166 21-150 (392)
50 TIGR00900 2A0121 H+ Antiporter 99.7 5.7E-17 1.2E-21 156.6 17.0 132 35-168 20-153 (365)
51 PRK15075 citrate-proton sympor 99.7 1.7E-16 3.6E-21 158.6 19.6 145 12-163 12-173 (434)
52 PRK03633 putative MFS family t 99.7 2.2E-16 4.7E-21 155.0 19.9 130 31-167 23-154 (381)
53 PF07690 MFS_1: Major Facilita 99.7 4.5E-17 9.7E-22 156.7 14.1 129 33-168 15-146 (352)
54 PRK05122 major facilitator sup 99.7 4.1E-16 8.9E-21 153.7 20.9 130 39-168 41-173 (399)
55 KOG2532 Permease of the major 99.7 6.8E-17 1.5E-21 161.4 15.4 253 41-393 65-322 (466)
56 PRK11102 bicyclomycin/multidru 99.7 1.5E-16 3.3E-21 155.3 17.5 129 32-167 9-139 (377)
57 PRK09952 shikimate transporter 99.7 2.9E-16 6.3E-21 157.1 19.8 147 11-165 18-183 (438)
58 PRK12382 putative transporter; 99.7 9.5E-16 2.1E-20 150.8 21.7 129 39-167 41-172 (392)
59 PRK11652 emrD multidrug resist 99.7 3.2E-15 6.9E-20 147.2 18.9 129 32-167 26-156 (394)
60 TIGR00805 oat sodium-independe 99.7 2.9E-16 6.2E-21 163.5 9.9 134 34-167 53-232 (633)
61 TIGR00901 2A0125 AmpG-related 99.7 5.3E-15 1.2E-19 143.5 18.2 129 34-167 8-143 (356)
62 TIGR00883 2A0106 metabolite-pr 99.6 4E-15 8.8E-20 145.0 16.1 133 31-164 10-153 (394)
63 TIGR00899 2A0120 sugar efflux 99.6 1.1E-14 2.4E-19 141.8 19.0 123 39-168 23-150 (375)
64 PRK10054 putative transporter; 99.6 6.2E-15 1.3E-19 145.6 16.9 127 34-167 28-156 (395)
65 PRK15403 multidrug efflux syst 99.6 1.8E-14 3.9E-19 143.1 19.8 130 31-167 33-164 (413)
66 PRK10489 enterobactin exporter 99.6 8.1E-15 1.8E-19 145.5 17.0 133 34-168 37-171 (417)
67 PRK11646 multidrug resistance 99.6 2.8E-14 6E-19 141.1 20.0 147 12-167 11-159 (400)
68 PRK09874 drug efflux system pr 99.6 5.1E-14 1.1E-18 138.9 20.2 129 32-168 32-167 (408)
69 KOG2533 Permease of the major 99.6 1.8E-14 3.8E-19 144.6 16.6 248 40-392 72-336 (495)
70 KOG0254 Predicted transporter 99.6 5.8E-14 1.3E-18 143.4 20.7 261 49-394 89-358 (513)
71 TIGR00806 rfc RFC reduced fola 99.6 4.9E-14 1.1E-18 138.6 18.0 163 29-199 41-208 (511)
72 PRK11195 lysophospholipid tran 99.6 8.5E-14 1.9E-18 137.3 19.7 124 35-168 24-149 (393)
73 cd06174 MFS The Major Facilita 99.6 7.6E-14 1.7E-18 133.6 18.5 132 30-168 15-148 (352)
74 PRK11010 ampG muropeptide tran 99.6 9.4E-14 2E-18 141.0 19.3 131 33-168 31-168 (491)
75 PRK08633 2-acyl-glycerophospho 99.6 1.1E-13 2.3E-18 154.2 20.4 129 35-167 31-163 (1146)
76 PRK11128 putative 3-phenylprop 99.6 1.2E-13 2.6E-18 135.7 18.4 238 35-394 25-269 (382)
77 KOG2563 Permease of the major 99.6 9.3E-14 2E-18 134.0 16.2 286 8-394 38-330 (480)
78 PRK09528 lacY galactoside perm 99.6 1E-13 2.2E-18 137.9 17.2 150 11-167 10-165 (420)
79 TIGR00902 2A0127 phenyl propri 99.6 2.1E-13 4.5E-18 133.9 18.8 238 35-394 25-269 (382)
80 PRK11902 ampG muropeptide tran 99.5 1.9E-13 4.2E-18 135.1 18.0 136 27-167 11-154 (402)
81 COG0738 FucP Fucose permease [ 99.5 1.4E-12 3E-17 124.5 21.4 264 31-392 30-299 (422)
82 KOG1330 Sugar transporter/spin 99.5 1.8E-14 3.9E-19 139.2 7.9 142 12-160 30-174 (493)
83 PRK06814 acylglycerophosphoeth 99.5 4E-13 8.7E-18 149.7 18.8 240 40-393 42-289 (1140)
84 PF00083 Sugar_tr: Sugar (and 99.5 1.4E-16 3.1E-21 159.5 -9.3 156 50-209 47-207 (451)
85 TIGR00882 2A0105 oligosacchari 99.5 2.1E-12 4.5E-17 127.4 20.1 130 36-166 24-156 (396)
86 TIGR00889 2A0110 nucleoside tr 99.5 1.5E-12 3.2E-17 129.6 17.3 81 36-123 25-107 (418)
87 PRK15011 sugar efflux transpor 99.5 6.4E-12 1.4E-16 123.9 20.8 147 12-168 16-168 (393)
88 PRK10207 dipeptide/tripeptide 99.4 9.1E-12 2E-16 126.3 19.9 184 7-196 6-196 (489)
89 PRK10642 proline/glycine betai 99.4 3.8E-11 8.3E-16 121.9 18.8 170 29-202 265-438 (490)
90 KOG0255 Synaptic vesicle trans 99.4 9.4E-12 2E-16 127.3 14.3 151 42-202 111-263 (521)
91 COG2807 CynX Cyanate permease 99.3 8.8E-11 1.9E-15 110.8 18.8 240 30-392 28-270 (395)
92 TIGR00924 yjdL_sub1_fam amino 99.3 8.1E-11 1.8E-15 119.1 17.7 157 31-194 27-192 (475)
93 PF06609 TRI12: Fungal trichot 99.3 4.2E-10 9.2E-15 114.8 22.8 156 34-198 64-222 (599)
94 PRK09584 tppB putative tripept 99.3 1.5E-10 3.3E-15 117.8 19.2 155 30-190 37-197 (500)
95 KOG3764 Vesicular amine transp 99.3 1.1E-11 2.5E-16 117.8 9.7 147 43-196 100-250 (464)
96 TIGR00792 gph sugar (Glycoside 99.3 3.2E-11 7E-16 120.1 13.4 128 36-164 22-157 (437)
97 PRK15462 dipeptide/tripeptide 99.3 5.6E-10 1.2E-14 112.5 20.2 158 29-192 24-187 (493)
98 PRK15011 sugar efflux transpor 99.2 5.7E-10 1.2E-14 110.0 18.5 157 32-195 234-392 (393)
99 TIGR02718 sider_RhtX_FptX side 99.2 5.8E-10 1.3E-14 109.7 18.3 253 25-394 11-273 (390)
100 KOG0252 Inorganic phosphate tr 99.2 2.2E-10 4.7E-15 111.0 14.7 165 31-195 58-247 (538)
101 TIGR00880 2_A_01_02 Multidrug 99.1 7E-10 1.5E-14 91.5 11.5 120 60-186 9-130 (141)
102 TIGR00889 2A0110 nucleoside tr 99.1 1.7E-09 3.8E-14 107.6 16.2 160 35-197 229-406 (418)
103 PRK11551 putative 3-hydroxyphe 99.1 2.4E-09 5.2E-14 105.7 17.0 156 31-193 237-395 (406)
104 TIGR00899 2A0120 sugar efflux 99.1 3.3E-09 7.1E-14 103.2 17.7 148 40-194 226-374 (375)
105 TIGR01299 synapt_SV2 synaptic 99.1 2.4E-09 5.2E-14 112.9 16.5 129 58-194 604-734 (742)
106 TIGR00897 2A0118 polyol permea 99.1 7.7E-09 1.7E-13 102.3 18.3 162 30-194 238-401 (402)
107 PRK09556 uhpT sugar phosphate 99.1 3.7E-09 8E-14 106.7 15.4 159 31-194 275-449 (467)
108 PRK09528 lacY galactoside perm 99.1 3.4E-09 7.5E-14 105.3 15.0 150 43-199 256-409 (420)
109 cd06174 MFS The Major Facilita 99.0 6.2E-09 1.3E-13 99.5 16.2 152 32-190 193-348 (352)
110 KOG0253 Synaptic vesicle trans 99.0 2.6E-09 5.6E-14 100.9 12.5 183 11-202 74-259 (528)
111 PRK05122 major facilitator sup 99.0 7.9E-09 1.7E-13 101.8 15.9 156 35-199 237-394 (399)
112 TIGR00890 2A0111 Oxalate/Forma 99.0 6.8E-09 1.5E-13 100.4 15.1 141 35-180 226-368 (377)
113 PRK03545 putative arabinose tr 99.0 2.5E-08 5.3E-13 98.2 17.9 153 38-197 230-384 (390)
114 PRK10406 alpha-ketoglutarate t 99.0 2.8E-08 6E-13 99.3 18.1 166 30-199 259-429 (432)
115 PRK10489 enterobactin exporter 99.0 1.7E-08 3.8E-13 100.1 16.4 159 33-198 242-404 (417)
116 PRK09952 shikimate transporter 99.0 4.3E-08 9.2E-13 98.2 18.7 162 31-195 267-434 (438)
117 PRK03699 putative transporter; 98.9 1.8E-08 3.9E-13 99.3 15.3 157 31-194 222-380 (394)
118 TIGR00902 2A0127 phenyl propri 98.9 4.8E-08 1E-12 95.9 17.9 143 32-182 223-368 (382)
119 TIGR00710 efflux_Bcr_CflA drug 98.9 6.3E-08 1.4E-12 94.4 18.2 136 32-170 224-361 (385)
120 PRK15402 multidrug efflux syst 98.9 8E-08 1.7E-12 95.0 19.2 162 32-195 233-397 (406)
121 TIGR00879 SP MFS transporter, 98.9 2.2E-08 4.7E-13 100.0 15.3 166 31-197 301-474 (481)
122 PRK09669 putative symporter Ya 98.9 1.5E-08 3.3E-13 101.6 13.8 124 38-162 34-165 (444)
123 TIGR00883 2A0106 metabolite-pr 98.9 3E-08 6.4E-13 96.5 14.9 136 30-169 235-375 (394)
124 PRK10077 xylE D-xylose transpo 98.9 5.4E-08 1.2E-12 98.2 16.8 162 34-198 291-462 (479)
125 KOG2615 Permease of the major 98.9 9.1E-09 2E-13 97.7 10.1 132 28-167 42-180 (451)
126 PF13347 MFS_2: MFS/sugar tran 98.9 1.6E-08 3.4E-13 101.0 12.6 130 37-166 25-163 (428)
127 PRK11010 ampG muropeptide tran 98.9 9E-08 1.9E-12 97.3 18.1 157 37-196 246-405 (491)
128 PRK10504 putative transporter; 98.9 8.9E-08 1.9E-12 96.6 17.7 130 35-168 282-414 (471)
129 PRK09705 cynX putative cyanate 98.9 1.1E-07 2.3E-12 93.9 17.1 151 31-189 222-376 (393)
130 PRK12307 putative sialic acid 98.8 1E-07 2.2E-12 94.7 16.8 134 31-169 248-383 (426)
131 COG2814 AraJ Arabinose efflux 98.8 2.2E-07 4.8E-12 90.3 17.9 163 26-195 224-387 (394)
132 TIGR00887 2A0109 phosphate:H+ 98.8 8.1E-08 1.8E-12 97.9 15.6 135 30-168 304-453 (502)
133 PF05977 MFS_3: Transmembrane 98.8 3E-07 6.6E-12 93.8 19.4 126 40-167 36-163 (524)
134 PRK15034 nitrate/nitrite trans 98.8 9.6E-08 2.1E-12 95.5 15.2 164 27-193 265-454 (462)
135 PRK12382 putative transporter; 98.8 7.3E-08 1.6E-12 94.7 14.2 146 34-188 236-383 (392)
136 PRK11128 putative 3-phenylprop 98.8 2.2E-07 4.8E-12 91.2 17.6 132 34-172 225-358 (382)
137 PRK09874 drug efflux system pr 98.8 1.7E-07 3.8E-12 92.2 16.6 131 59-196 268-401 (408)
138 PRK03893 putative sialic acid 98.8 1.5E-07 3.2E-12 95.5 16.4 134 33-172 294-431 (496)
139 PRK03633 putative MFS family t 98.8 2.6E-07 5.7E-12 90.6 16.4 140 36-185 222-363 (381)
140 PRK15075 citrate-proton sympor 98.8 3.8E-07 8.1E-12 91.2 17.6 135 30-168 254-393 (434)
141 KOG4686 Predicted sugar transp 98.7 6.4E-09 1.4E-13 95.0 3.9 120 35-158 65-187 (459)
142 PRK11273 glpT sn-glycerol-3-ph 98.7 2.6E-07 5.6E-12 92.9 15.7 165 30-199 269-440 (452)
143 PRK14995 methyl viologen resis 98.7 2E-07 4.3E-12 94.9 15.0 133 32-168 277-412 (495)
144 COG2223 NarK Nitrate/nitrite t 98.7 1.1E-07 2.5E-12 91.7 12.1 161 26-190 230-398 (417)
145 TIGR01301 GPH_sucrose GPH fami 98.7 3.6E-07 7.9E-12 91.9 16.3 171 28-198 15-223 (477)
146 TIGR00892 2A0113 monocarboxyla 98.7 1E-07 2.3E-12 95.9 12.4 131 32-169 259-395 (455)
147 PLN00028 nitrate transmembrane 98.7 1.5E-07 3.4E-12 95.2 13.6 156 35-198 273-437 (476)
148 PRK10429 melibiose:sodium symp 98.7 1.6E-07 3.6E-12 94.9 13.8 123 38-161 31-161 (473)
149 KOG0569 Permease of the major 98.7 5.3E-07 1.2E-11 90.1 17.0 170 25-200 282-458 (485)
150 TIGR00895 2A0115 benzoate tran 98.7 2E-07 4.4E-12 90.9 13.8 129 31-166 267-397 (398)
151 TIGR00893 2A0114 d-galactonate 98.7 2.5E-07 5.4E-12 89.7 14.3 144 32-178 233-383 (399)
152 TIGR00711 efflux_EmrB drug res 98.7 2.5E-07 5.4E-12 93.4 14.7 133 33-168 274-409 (485)
153 PRK11102 bicyclomycin/multidru 98.7 1.2E-06 2.7E-11 85.3 18.8 120 40-162 221-342 (377)
154 TIGR00891 2A0112 putative sial 98.7 2.7E-07 5.8E-12 90.4 14.0 128 36-169 260-390 (405)
155 TIGR00900 2A0121 H+ Antiporter 98.7 2.9E-07 6.3E-12 88.7 14.1 128 35-168 232-362 (365)
156 TIGR02718 sider_RhtX_FptX side 98.7 7.9E-07 1.7E-11 87.4 17.4 144 36-180 230-377 (390)
157 PRK11043 putative transporter; 98.7 1.6E-06 3.4E-11 85.6 19.5 137 31-169 220-357 (401)
158 PRK10091 MFS transport protein 98.6 1.4E-06 3.1E-11 85.5 17.3 136 38-179 224-361 (382)
159 PRK10213 nepI ribonucleoside t 98.6 2.1E-06 4.6E-11 84.7 18.4 130 37-174 240-371 (394)
160 PF05977 MFS_3: Transmembrane 98.6 2.1E-06 4.6E-11 87.6 17.3 148 36-190 240-390 (524)
161 PRK11663 regulatory protein Uh 98.6 1.3E-06 2.9E-11 87.2 15.2 158 32-194 261-425 (434)
162 PRK09848 glucuronide transport 98.6 9.5E-07 2.1E-11 88.6 14.2 123 36-158 31-161 (448)
163 TIGR00882 2A0105 oligosacchari 98.6 1.5E-06 3.3E-11 85.6 15.1 140 45-191 250-393 (396)
164 TIGR01272 gluP glucose/galacto 98.5 1.9E-06 4.1E-11 82.3 14.9 118 43-169 172-290 (310)
165 PRK11902 ampG muropeptide tran 98.5 4.9E-06 1.1E-10 82.2 17.8 147 38-190 234-386 (402)
166 TIGR00901 2A0125 AmpG-related 98.5 1.5E-06 3.3E-11 84.2 13.8 120 34-153 229-355 (356)
167 PRK08633 2-acyl-glycerophospho 98.5 2.2E-06 4.7E-11 96.0 16.5 121 38-165 257-380 (1146)
168 PRK10054 putative transporter; 98.5 4.9E-06 1.1E-10 82.2 17.0 149 43-198 238-389 (395)
169 TIGR00894 2A0114euk Na(+)-depe 98.5 2.7E-06 5.8E-11 85.8 15.3 158 31-192 278-448 (465)
170 TIGR01272 gluP glucose/galacto 98.5 1.2E-06 2.6E-11 83.7 11.9 191 107-394 9-207 (310)
171 PRK10133 L-fucose transporter; 98.5 4.4E-06 9.5E-11 83.8 16.3 120 41-169 287-407 (438)
172 TIGR00712 glpT glycerol-3-phos 98.5 2.8E-06 6.2E-11 85.0 14.7 163 31-195 268-435 (438)
173 PRK11652 emrD multidrug resist 98.5 1.2E-05 2.7E-10 79.0 18.5 126 40-169 234-360 (394)
174 TIGR00898 2A0119 cation transp 98.5 1.9E-06 4.1E-11 87.7 13.1 96 64-164 371-467 (505)
175 TIGR00788 fbt folate/biopterin 98.5 3.7E-06 8E-11 85.0 14.9 168 24-197 35-212 (468)
176 TIGR00896 CynX cyanate transpo 98.4 3.6E-06 7.9E-11 81.5 14.1 130 31-168 214-347 (355)
177 PRK10473 multidrug efflux syst 98.4 2.1E-05 4.5E-10 77.3 19.7 118 40-166 230-350 (392)
178 PF03825 Nuc_H_symport: Nucleo 98.4 1.1E-05 2.5E-10 79.7 17.4 155 36-196 229-398 (400)
179 COG3104 PTR2 Dipeptide/tripept 98.4 1.8E-06 3.9E-11 85.3 11.4 152 38-194 46-206 (498)
180 PF03825 Nuc_H_symport: Nucleo 98.4 2.9E-05 6.4E-10 76.8 19.4 59 36-94 24-84 (400)
181 PRK11195 lysophospholipid tran 98.4 1.4E-05 3.1E-10 78.8 17.0 121 40-168 232-355 (393)
182 PF11700 ATG22: Vacuole efflux 98.4 1.3E-05 2.8E-10 81.0 16.8 130 38-168 306-441 (477)
183 TIGR00792 gph sugar (Glycoside 98.4 6E-06 1.3E-10 82.2 13.8 146 47-198 255-422 (437)
184 PRK11462 putative transporter; 98.3 1.5E-05 3.3E-10 80.4 16.1 124 39-163 35-166 (460)
185 PRK06814 acylglycerophosphoeth 98.3 8.9E-06 1.9E-10 91.1 15.9 132 36-167 247-394 (1140)
186 PF07690 MFS_1: Major Facilita 98.3 4.5E-06 9.7E-11 80.0 11.2 125 32-160 224-352 (352)
187 TIGR02332 HpaX 4-hydroxyphenyl 98.3 6.1E-06 1.3E-10 82.0 12.4 133 30-169 258-395 (412)
188 COG2270 Permeases of the major 98.3 1.2E-05 2.7E-10 77.9 13.6 148 41-196 280-431 (438)
189 PF11700 ATG22: Vacuole efflux 98.3 6.3E-05 1.4E-09 76.0 19.4 71 323-393 272-345 (477)
190 PRK11646 multidrug resistance 98.3 1.4E-05 3.1E-10 79.0 14.5 128 35-169 229-359 (400)
191 TIGR00886 2A0108 nitrite extru 98.3 3.4E-06 7.4E-11 81.7 9.6 121 32-155 243-365 (366)
192 PF01306 LacY_symp: LacY proto 98.2 6.3E-06 1.4E-10 80.9 10.5 128 65-199 276-406 (412)
193 PF01306 LacY_symp: LacY proto 98.2 2.4E-05 5.3E-10 76.8 14.5 123 40-168 34-163 (412)
194 PF05631 DUF791: Protein of un 98.2 2.7E-05 5.9E-10 74.4 14.3 81 40-128 60-141 (354)
195 TIGR00881 2A0104 phosphoglycer 98.2 1.1E-05 2.4E-10 77.9 12.0 132 32-168 234-371 (379)
196 PRK09848 glucuronide transport 98.2 1.2E-05 2.5E-10 80.8 12.3 153 41-198 256-429 (448)
197 TIGR00903 2A0129 major facilit 98.2 6.4E-05 1.4E-09 73.6 17.1 141 29-180 207-352 (368)
198 KOG4686 Predicted sugar transp 98.2 5.7E-05 1.2E-09 69.6 14.1 149 11-170 264-415 (459)
199 KOG2325 Predicted transporter/ 98.2 4.9E-05 1.1E-09 75.9 14.9 187 10-200 29-236 (488)
200 KOG0254 Predicted transporter 98.2 5.2E-05 1.1E-09 77.6 15.5 153 26-181 308-471 (513)
201 PRK10207 dipeptide/tripeptide 98.1 2.7E-05 5.9E-10 79.1 12.1 136 63-198 324-481 (489)
202 PRK15403 multidrug efflux syst 98.1 0.00019 4.1E-09 71.4 17.8 166 30-199 234-404 (413)
203 PF03137 OATP: Organic Anion T 98.1 5.6E-07 1.2E-11 92.2 -0.3 125 35-159 24-193 (539)
204 KOG0253 Synaptic vesicle trans 98.0 1.1E-05 2.3E-10 76.9 7.0 126 65-199 398-524 (528)
205 PF13347 MFS_2: MFS/sugar tran 98.0 8.7E-05 1.9E-09 74.0 13.8 151 41-197 253-425 (428)
206 PF01770 Folate_carrier: Reduc 97.9 0.00088 1.9E-08 65.7 18.2 157 34-198 24-186 (412)
207 TIGR00788 fbt folate/biopterin 97.9 7.8E-05 1.7E-09 75.4 10.5 154 42-195 281-447 (468)
208 KOG2504 Monocarboxylate transp 97.9 0.00012 2.7E-09 74.4 11.5 158 31-194 315-476 (509)
209 PRK09584 tppB putative tripept 97.8 0.00033 7.2E-09 71.5 14.4 128 67-194 339-480 (500)
210 PF03209 PUCC: PUCC protein; 97.8 0.0017 3.7E-08 63.2 18.3 130 40-169 6-151 (403)
211 PRK09669 putative symporter Ya 97.8 0.00037 8.1E-09 69.8 14.4 140 54-198 269-430 (444)
212 PRK10429 melibiose:sodium symp 97.8 0.0004 8.7E-09 70.3 13.6 119 47-167 264-391 (473)
213 COG2270 Permeases of the major 97.7 0.00054 1.2E-08 66.7 12.9 72 322-393 242-316 (438)
214 TIGR00924 yjdL_sub1_fam amino 97.7 0.00064 1.4E-08 68.9 14.2 127 68-194 336-469 (475)
215 COG2271 UhpC Sugar phosphate p 97.7 0.00057 1.2E-08 66.5 12.1 135 30-169 268-409 (448)
216 PF03092 BT1: BT1 family; Int 97.6 0.0012 2.5E-08 66.2 13.7 158 35-195 11-177 (433)
217 TIGR00885 fucP L-fucose:H+ sym 97.6 0.0026 5.6E-08 63.2 15.6 125 35-168 253-380 (410)
218 COG2807 CynX Cyanate permease 97.5 0.0041 9E-08 59.6 15.4 154 29-190 223-382 (395)
219 COG0477 ProP Permeases of the 97.5 0.0018 3.8E-08 59.4 12.5 121 35-160 23-149 (338)
220 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.0028 6E-08 66.6 14.5 133 35-167 9-148 (654)
221 PF00083 Sugar_tr: Sugar (and 97.3 2.8E-06 6E-11 85.1 -9.3 164 32-198 271-441 (451)
222 KOG0252 Inorganic phosphate tr 97.3 0.00049 1.1E-08 67.6 6.5 182 15-199 304-503 (538)
223 COG2211 MelB Na+/melibiose sym 97.3 0.0039 8.4E-08 62.3 12.9 126 40-166 39-172 (467)
224 PRK11462 putative transporter; 97.3 0.0098 2.1E-07 60.1 15.9 141 52-197 266-429 (460)
225 KOG2532 Permease of the major 97.2 0.0059 1.3E-07 61.6 12.8 153 30-188 274-441 (466)
226 KOG3762 Predicted transporter 97.2 0.002 4.3E-08 64.6 9.1 152 41-199 398-553 (618)
227 COG0738 FucP Fucose permease [ 97.1 0.015 3.3E-07 56.5 14.6 139 27-174 249-389 (422)
228 PF05978 UNC-93: Ion channel r 97.1 0.0062 1.4E-07 51.9 10.8 97 63-167 52-149 (156)
229 PF06779 DUF1228: Protein of u 97.1 0.0024 5.3E-08 48.2 7.3 69 30-98 8-77 (85)
230 KOG2533 Permease of the major 97.0 0.0044 9.5E-08 62.9 10.4 135 28-169 287-430 (495)
231 COG2211 MelB Na+/melibiose sym 97.0 0.01 2.2E-07 59.3 12.4 119 44-167 267-394 (467)
232 PF12832 MFS_1_like: MFS_1 lik 96.9 0.004 8.6E-08 46.4 6.6 54 35-88 21-75 (77)
233 TIGR01301 GPH_sucrose GPH fami 96.9 0.039 8.5E-07 55.8 15.9 134 65-198 322-476 (477)
234 PF06609 TRI12: Fungal trichot 96.6 0.0078 1.7E-07 62.2 8.3 148 17-169 312-467 (599)
235 KOG3626 Organic anion transpor 96.6 0.014 3E-07 61.2 10.1 62 36-97 119-181 (735)
236 KOG0255 Synaptic vesicle trans 96.6 0.083 1.8E-06 54.0 15.9 130 65-199 367-498 (521)
237 PF03209 PUCC: PUCC protein; 96.5 0.05 1.1E-06 53.2 12.9 120 41-164 236-358 (403)
238 KOG2816 Predicted transporter 96.5 0.033 7.2E-07 56.1 11.9 121 40-168 268-391 (463)
239 KOG3764 Vesicular amine transp 96.2 0.033 7.2E-07 54.1 9.4 125 40-171 297-431 (464)
240 PRK15462 dipeptide/tripeptide 96.0 0.2 4.4E-06 50.9 15.0 115 52-166 311-437 (493)
241 KOG2816 Predicted transporter 95.8 0.044 9.4E-07 55.2 9.1 125 63-197 77-203 (463)
242 TIGR00769 AAA ADP/ATP carrier 95.8 1.4 3E-05 44.6 19.7 151 14-167 6-189 (472)
243 PF02487 CLN3: CLN3 protein; 94.6 0.47 1E-05 46.7 11.7 123 65-198 76-200 (402)
244 PRK03612 spermidine synthase; 94.4 1.9 4E-05 44.4 16.2 54 140-193 142-197 (521)
245 PF06963 FPN1: Ferroportin1 (F 93.9 1.9 4.1E-05 43.1 14.6 126 32-157 276-406 (432)
246 PF06963 FPN1: Ferroportin1 (F 93.6 5 0.00011 40.1 16.9 69 324-393 251-321 (432)
247 KOG3098 Uncharacterized conser 93.4 1.6 3.5E-05 43.8 13.1 105 56-160 286-405 (461)
248 KOG2615 Permease of the major 92.5 0.45 9.7E-06 46.3 7.3 120 41-167 289-412 (451)
249 PF00854 PTR2: POT family; In 92.5 0.63 1.4E-05 45.4 8.7 116 79-194 2-123 (372)
250 PTZ00207 hypothetical protein; 92.0 3 6.5E-05 43.5 13.4 119 37-163 376-507 (591)
251 KOG3098 Uncharacterized conser 91.7 0.53 1.1E-05 47.3 7.1 95 63-165 65-160 (461)
252 PF12832 MFS_1_like: MFS_1 lik 91.6 0.11 2.5E-06 38.5 1.8 45 350-394 18-64 (77)
253 TIGR00805 oat sodium-independe 91.5 0.62 1.3E-05 49.1 7.8 66 29-94 345-415 (633)
254 KOG4332 Predicted sugar transp 90.4 0.095 2.1E-06 48.4 0.5 79 42-128 65-144 (454)
255 KOG3574 Acetyl-CoA transporter 87.4 9.6 0.00021 37.4 11.6 172 26-199 42-242 (510)
256 KOG3762 Predicted transporter 86.8 0.96 2.1E-05 45.9 4.8 57 36-92 33-90 (618)
257 KOG0637 Sucrose transporter an 86.3 2.3 5.1E-05 42.4 7.0 126 35-160 53-196 (498)
258 PF03092 BT1: BT1 family; Int 85.5 2 4.3E-05 43.0 6.4 121 45-167 251-378 (433)
259 KOG2563 Permease of the major 83.0 3.4 7.4E-05 41.2 6.5 138 28-168 280-420 (480)
260 COG3104 PTR2 Dipeptide/tripept 80.7 49 0.0011 33.6 13.7 127 64-190 340-484 (498)
261 PF02487 CLN3: CLN3 protein; 80.1 12 0.00026 37.1 9.3 113 47-164 279-392 (402)
262 KOG1237 H+/oligopeptide sympor 75.7 59 0.0013 33.9 13.3 133 34-166 58-217 (571)
263 TIGR00939 2a57 Equilibrative N 65.0 62 0.0014 32.5 10.5 129 65-197 62-199 (437)
264 KOG3880 Predicted small molecu 54.9 17 0.00036 34.8 4.0 125 65-200 79-206 (409)
265 KOG2325 Predicted transporter/ 51.8 15 0.00032 37.3 3.4 159 13-171 260-452 (488)
266 PF11299 DUF3100: Protein of u 51.1 23 0.00049 32.1 4.0 91 66-160 125-223 (241)
267 COG4262 Predicted spermidine s 50.0 2.6E+02 0.0057 27.4 12.4 87 107-194 104-192 (508)
268 KOG0637 Sucrose transporter an 49.9 21 0.00044 35.9 4.0 36 62-97 346-381 (498)
269 PF11947 DUF3464: Protein of u 49.3 64 0.0014 27.3 6.3 87 68-157 54-144 (153)
270 KOG3626 Organic anion transpor 45.9 71 0.0015 34.2 7.4 63 31-93 409-476 (735)
271 PF01733 Nucleoside_tran: Nucl 43.2 7.9 0.00017 36.8 0.0 20 369-388 186-205 (309)
272 PF13000 Acatn: Acetyl-coenzym 42.8 3.4E+02 0.0074 27.9 11.2 61 138-198 149-226 (544)
273 TIGR00806 rfc RFC reduced fola 42.7 92 0.002 31.8 7.3 86 59-149 309-395 (511)
274 COG5336 Uncharacterized protei 42.2 59 0.0013 25.7 4.6 23 63-85 57-80 (116)
275 TIGR00880 2_A_01_02 Multidrug 41.6 1.4E+02 0.0031 22.9 7.4 19 66-84 105-123 (141)
276 KOG1330 Sugar transporter/spin 41.0 96 0.0021 31.4 7.0 41 34-74 268-309 (493)
277 TIGR02230 ATPase_gene1 F0F1-AT 38.0 1E+02 0.0022 24.0 5.4 26 64-89 58-84 (100)
278 PF10225 DUF2215: Uncharacteri 29.4 4.5E+02 0.0098 24.1 10.0 54 107-163 33-86 (249)
279 PF03219 TLC: TLC ATP/ADP tran 28.3 6.6E+02 0.014 25.7 13.8 106 63-168 74-205 (491)
280 TIGR00926 2A1704 Peptide:H+ sy 25.3 2.8E+02 0.006 29.5 7.9 75 114-188 571-646 (654)
281 KOG3810 Micronutrient transpor 23.5 66 0.0014 31.4 2.6 182 11-199 1-188 (433)
282 PF03137 OATP: Organic Anion T 22.9 28 0.00061 36.0 0.0 61 31-91 322-387 (539)
283 PRK10692 hypothetical protein; 22.1 3.1E+02 0.0067 20.7 5.3 18 77-94 3-20 (92)
284 PF09527 ATPase_gene1: Putativ 22.0 2.5E+02 0.0055 18.7 5.8 28 64-91 16-44 (55)
285 PF10762 DUF2583: Protein of u 20.3 2.8E+02 0.0061 20.8 4.7 18 77-94 3-20 (89)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-44 Score=365.75 Aligned_cols=362 Identities=24% Similarity=0.298 Sum_probs=283.1
Q ss_pred CCCCcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccCchHHHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+..+||..++++++++.+.|..|.|+++.+++++++|+|++|++++........++++++|++.||+|+|+++++|.++.
T Consensus 22 ~e~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R~vllig~ll~ 101 (591)
T PTZ00207 22 NEPRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPRPIFVLSMTVF 101 (591)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999976554444455778999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
++|+++++++..+.+. ++++++++++++.|+|.+..++++..++.+|||++||+++|+..++.++|+++++++...++.
T Consensus 102 ~iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 102 CLGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999886543332 378999999999999999888889999999999999999999999999999999999999887
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccc----ccccc-----------------chhHhHHHHHHHHHHHHH
Q 016123 169 DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDE----EKEEA-----------------KYFSIINTVAIVVALYLQ 227 (394)
Q Consensus 169 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~----~~~~~-----------------~~~~~~~~~~~~l~~~~~ 227 (394)
++++.+++++++++.++++++.+++|++|+.....+ ++++. +|+.+.+..++++++|++
T Consensus 181 ~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~ 260 (591)
T PTZ00207 181 DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLP 260 (591)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHH
Confidence 777889999999999999999999998885432100 11222 377778888899999999
Q ss_pred HHhhccCCCcch---hHHHHHHHH-HHHHhh-hhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhc
Q 016123 228 VYDFLPNKSETL---ALIFSGILI-ILLASP-VAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVED 302 (394)
Q Consensus 228 ~~~~~~~~~~~~---~~~~~~~~~-~~l~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 302 (394)
++++++++.+++ +..++++++ +++..| +++|++. ++++++++ ++|.|+.+..++ +++ ...+|.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~-~~~~~~~~---~~~~~~~~~~~~--~~~------~~~~~~ 328 (591)
T PTZ00207 261 LQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT-FDGKRPHD---DSDGKAKEHVEA--GEE------VSAAED 328 (591)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH-hccCCcCC---Cccccccccccc--ccc------cccccc
Confidence 999999988876 677777776 777888 8888864 33222211 111111000000 000 000000
Q ss_pred c-hhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHh-CC-Ccc--hh-hHHHHHH
Q 016123 303 T-VVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GY-VDV--SI-FVSLTSI 376 (394)
Q Consensus 303 ~-~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~-G~-~~~--a~-~vsl~si 376 (394)
+ .+++ .+ .+.|+.++ |++|++++.|||++|++++|+.|+|+.++||++||.+++ |+ ++. .. +++++|+
T Consensus 329 ~~~~~~--~~--~~~P~~~~--t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si 402 (591)
T PTZ00207 329 KVVETD--VD--YIAPQFQE--TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGV 402 (591)
T ss_pred cccccc--cc--CCCCCCcc--hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhH
Confidence 0 0000 10 12355544 999999999999999999999999999999999999999 87 343 33 8999999
Q ss_pred HHHHhhhhhcccc
Q 016123 377 WGFFGRIISGSVS 389 (394)
Q Consensus 377 ~~~~GRl~~G~ls 389 (394)
+|++||+.+|+++
T Consensus 403 ~~~~GRl~~g~~~ 415 (591)
T PTZ00207 403 GSAVGRLCMSYFE 415 (591)
T ss_pred HHHhhHHHHHHHH
Confidence 9999999999998
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=5.2e-36 Score=273.53 Aligned_cols=247 Identities=50% Similarity=0.907 Sum_probs=230.3
Q ss_pred cHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccCchHHHHHHHHHHHHHH
Q 016123 13 KWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGY 92 (394)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~ 92 (394)
||..++++++++.+.|+.|.|+.|.|++++++|+|++|++.++++..+|..++++.|.++||+|||.++++|.+...+||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY 80 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGY 80 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh
Q 016123 93 GAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPA 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~ 172 (394)
.+++++..+.+++.++|+++++.++.|.|.++.++++..+..++||++||++.|+.++.+|+++++++.++..+++++..
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~ 160 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPS 160 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCChH
Confidence 99999988877656799999999999999999889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcch---hHHHHHHHHH
Q 016123 173 KFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETL---ALIFSGILII 249 (394)
Q Consensus 173 ~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 249 (394)
.+++++++.+.++++++.+++|+.|++...+++++|++++...+..++++++|+++.++++++.+++ +....+++++
T Consensus 161 ~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~s~~~~~~~~~il~l 240 (250)
T PF06813_consen 161 SFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKLSRAARVIFAVILLL 240 (250)
T ss_pred HHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999999998875555667888899888888999999999999999999888 6667777788
Q ss_pred HHHhhhhhcc
Q 016123 250 LLASPVAIPV 259 (394)
Q Consensus 250 ~l~~p~~~~~ 259 (394)
++.+|+++|+
T Consensus 241 lL~~Pl~i~~ 250 (250)
T PF06813_consen 241 LLLLPLAIPV 250 (250)
T ss_pred HHHhhhhccC
Confidence 8899998873
No 3
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=5.2e-25 Score=222.02 Aligned_cols=314 Identities=18% Similarity=0.157 Sum_probs=223.9
Q ss_pred CCCCcHHHHHHHHHHH-HHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQ-AISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~-~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
+.-+.|.+++++++++ .+.|..++++++.+.++++++-+.++++|+.+....... .+|+.+.+.||+|.|.++++|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 4457899999999886 467889999999999999999999999997665544444 59999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHH-HHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
+.++|+++.+++ +++|++++ ++++.|+|.|+.|.+...++.+||+|||++|+|+..+|.|+|..+++++.+.
T Consensus 120 v~~~g~~lssF~-------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~ 192 (509)
T KOG2504|consen 120 VAALGLLLSSFA-------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKY 192 (509)
T ss_pred HHHHHHHHHHHH-------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence 999999998876 47888886 7999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHH
Q 016123 166 LFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSG 245 (394)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
+++...|+.-.++.....+..+++...+|+.+....+.++++.+.... ....-
T Consensus 193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~-----------------~~~~~---------- 245 (509)
T KOG2504|consen 193 LLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAA-----------------SVEST---------- 245 (509)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccc-----------------ccccc----------
Confidence 998755554444444444555566656655433322211111111000 00000
Q ss_pred HHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCC-CCCCcc-
Q 016123 246 ILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRP-VLGEDH- 323 (394)
Q Consensus 246 ~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 323 (394)
-++. .++. ++ ..++....+++++ + .. .+++ . +... ..+...
T Consensus 246 -----------------~~~~-~~~~------~~--~~~~~~~~~~~~~-~--~~---~~~~----~-~~~~~~~~~~~~ 288 (509)
T KOG2504|consen 246 -----------------PKPV-ELRI------SE--RDSGLKKLSLSNL-A--TL---KRGP----D-KWRNSPLQAFLS 288 (509)
T ss_pred -----------------cccc-cccc------cc--CCCCCCcccccch-h--hh---hhCC----c-cccccchhhhhh
Confidence 0000 0000 00 0011000000000 0 00 0000 0 0000 011111
Q ss_pred -hHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 324 -TIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 324 -t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
--++++|++.|+++.+...+..........+++.+.++.|++ +++.+++++++.|.+||++.|++.|+..
T Consensus 289 ~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 289 MLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred hhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 126899999999999999999998888999999999999997 5889999999999999999999999864
No 4
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=1.8e-24 Score=209.86 Aligned_cols=266 Identities=22% Similarity=0.293 Sum_probs=197.0
Q ss_pred CcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~ 90 (394)
|+|+.+.+.+......+..|.++.+.|++++++|+|.++.+++.+...++... .++.|++.||+|+|+++.++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~ 80 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGL 80 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHH
Confidence 45777777777777777788999999999999999999999987777788764 89999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCC
Q 016123 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD 170 (394)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~ 170 (394)
+...++++ ++++.+++.+++.|++.+..+......+.+|+|++||++.++...+.++|..+.+++...+.+
T Consensus 81 ~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 151 (377)
T TIGR00890 81 GFTFYAIA-------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPLITSVIN-- 151 (377)
T ss_pred HHHHHHHH-------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHHHHHHHh--
Confidence 98887765 468888888999999998877777788899999999999999999999999888877766543
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHH
Q 016123 171 PAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIIL 250 (394)
Q Consensus 171 ~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (394)
..+||..+...+.+.+..
T Consensus 152 ------------------------------------~~~~~~~f~~~~~~~~~~-------------------------- 169 (377)
T TIGR00890 152 ------------------------------------LEGVPAAFIYMGIIFLLV-------------------------- 169 (377)
T ss_pred ------------------------------------cccHHHHHHHHHHHHHHH--------------------------
Confidence 245665443322111000
Q ss_pred HHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhh
Q 016123 251 LASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMW 330 (394)
Q Consensus 251 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~ 330 (394)
..+.... ++ +++.+ +.++ + ++ . ..++.+.++.+|
T Consensus 170 -~~~~~~~----~~-----~~~~~-------~~~~---~---------------~~-------~----~~~~~~~~~~~~ 203 (377)
T TIGR00890 170 -IVLGAFL----IG-----YPPGQ-------LIKT---N---------------IE-------V----SVKDYTVWEMLR 203 (377)
T ss_pred -HHHHHHh----ee-----cCchh-------cccc---C---------------cc-------c----chhhhhHHHHHc
Confidence 0000000 11 11000 0000 0 00 0 001234578899
Q ss_pred chhHHHHHHHHHhcccceeeeeeChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 331 TVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 331 t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
++++|++.+.+++.........+...++.++.|.++ .....++.++.+.++++..|+++||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 269 (377)
T TIGR00890 204 TPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGR 269 (377)
T ss_pred CccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999988887776666556667777888888764 5578888999999999999999999986
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.90 E-value=1.8e-22 Score=200.34 Aligned_cols=290 Identities=13% Similarity=0.080 Sum_probs=200.9
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+.+|......++...+... ....+...|.+++++|+|..+.+++.+...++... +++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 3467666666655544333 45667778899999999999999987777777754 899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++..+.+++ ++++.+++.|++.|++.+..++.....+.+|||+ +||+++|+...+.++|..+.+.+...+.
T Consensus 84 ~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~ 156 (412)
T TIGR02332 84 GIASTATMFA-------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYIL 156 (412)
T ss_pred HHHHHHHHHh-------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887764 4688888999999999998777777788999995 7999999999999999999888877665
Q ss_pred C------CChhHHHHHHHHHH-HHHHHhhhhcccccCCCCCc-cccccccchhHhHHHHHHHHHHHHHHHhhccCCCcch
Q 016123 168 A------DDPAKFLFMLAIVP-FVVCLGAIFFLRETTPASTV-DEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETL 239 (394)
Q Consensus 168 ~------~~~~~~~~~~~~~~-~~v~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 239 (394)
+ ...||..+++..++ .+..++..+++|++|++... ++ ++..... .
T Consensus 157 ~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~--~~~~~~~----------~--------------- 209 (412)
T TIGR02332 157 ALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE--EDKKALK----------E--------------- 209 (412)
T ss_pred hCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH--HHHHHHH----------H---------------
Confidence 3 23566655554444 34445556667777754221 00 0000000 0
Q ss_pred hHHHHHHHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCC
Q 016123 240 ALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVL 319 (394)
Q Consensus 240 ~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (394)
..++. +.+ ..+| ++ +. ++.+ .
T Consensus 210 ----------------------~~~~~---~~~---------~~~~---~~--------------~~-------~~~~-~ 230 (412)
T TIGR02332 210 ----------------------MIDND---QLT---------LEQP---EG--------------AF-------AHAA-M 230 (412)
T ss_pred ----------------------HHHhc---ccc---------cccc---cc--------------cc-------cccc-c
Confidence 00000 000 0000 00 00 0000 0
Q ss_pred CCcchHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHh--CCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 320 GEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL--GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 320 ~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~--G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.....+++ ++++.+|+..+.+++.......+.+++++++++. |.+ +++...++..+++.+|+++.|+++||++|
T Consensus 231 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~ 308 (412)
T TIGR02332 231 PQRSMLRE-IFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKE 308 (412)
T ss_pred cHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCc
Confidence 00112333 4578999999988887776667888999999986 444 35667888999999999999999999874
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.88 E-value=1.3e-21 Score=195.49 Aligned_cols=158 Identities=15% Similarity=0.103 Sum_probs=123.8
Q ss_pred cccCcCCCCcHHHHHHHHHHHHHh-cccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHH
Q 016123 4 EVSYTSSAGKWLGFVTAVWVQAIS-GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIIL 81 (394)
Q Consensus 4 ~~~~~~~~~~w~~l~~~~~~~~~~-g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~ 81 (394)
|+..+....||..+...++...+. ...+.++.+.|++.+++|+|..+.+++.+...++.. .+++.|++.||+|+|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~ 91 (434)
T PRK11663 12 EIDARYRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM 91 (434)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH
Confidence 333333333444444444443332 234567788899999999999999998777777775 489999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHH
Q 016123 82 LIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFT 160 (394)
Q Consensus 82 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~ 160 (394)
.++.++.+++.++..+. ++++.+++.+++.|++.|..+.+....+.+|||+ +||+++|+...+.++|+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 164 (434)
T PRK11663 92 GIGLIATGIINILFGFS-------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP 164 (434)
T ss_pred HHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877654 4678888888888988888777788889999985 699999999999999999988
Q ss_pred HHHHhhcC
Q 016123 161 DLCSALFA 168 (394)
Q Consensus 161 ~i~~~~~~ 168 (394)
.+...+.+
T Consensus 165 ~~~~~l~~ 172 (434)
T PRK11663 165 LVVGAIAL 172 (434)
T ss_pred HHHHHHHH
Confidence 88777654
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.88 E-value=8.8e-22 Score=198.51 Aligned_cols=270 Identities=14% Similarity=0.065 Sum_probs=178.0
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
...+++..|++++++|+|..+.+++.+...++..+ +++.|++.||+|+|+++.++.++.+++.+..+...... ++++
T Consensus 45 r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~--~~~~ 122 (467)
T PRK09556 45 RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSG--SVSL 122 (467)
T ss_pred hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcc--cchH
Confidence 46677888999999999999999987777777754 89999999999999999999888887777665432111 1468
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC---ChhH-HHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD---DPAK-FLFMLAIVPF 183 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~---~~~~-~~~~~~~~~~ 183 (394)
+.+++.|++.|++.+...++..+.+.+|||+ +||+++|+..++.++|+++.+.+.....+. ..|+ .+.+.+++..
T Consensus 123 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~ 202 (467)
T PRK09556 123 GLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIAL 202 (467)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHH
Confidence 8888899999999988878888899999985 799999999999999999887765443321 0111 1111122222
Q ss_pred HHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccc
Q 016123 184 VVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFI 263 (394)
Q Consensus 184 ~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 263 (394)
+++++..+++|+.|++
T Consensus 203 ~~~i~~~~~~~~~p~~---------------------------------------------------------------- 218 (467)
T PRK09556 203 IIGFIGLRYGSDSPEE---------------------------------------------------------------- 218 (467)
T ss_pred HHHHHHHHhCCCChhh----------------------------------------------------------------
Confidence 2222222222222211
Q ss_pred cccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHh
Q 016123 264 KSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLC 343 (394)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~ 343 (394)
.+.. +.++ ...++ .. ++ ++.+ ++.+....+.-.++.+|++.+|.+.+..++
T Consensus 219 -------~~~~-~~~~-~~~~~--~~----------~~--~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 269 (467)
T PRK09556 219 -------LGWG-KAEE-IFGEP--IS----------EE--DKET------ESTDMTKWQIFVEYVLKNPVIWLLCFANIF 269 (467)
T ss_pred -------cCCC-Chhh-cccCc--cc----------hh--hhcc------ccccCcHHHHHHHHHHcChHHHHHHHHHHH
Confidence 0000 0000 00000 00 00 0000 000000001112347899999999998888
Q ss_pred cccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 344 GVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 344 ~~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.......+.+.++.++++ .|++ +++...++..+++.+|++++|+++||++|
T Consensus 270 ~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~ 323 (467)
T PRK09556 270 LYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANG 323 (467)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 766666666778877754 6886 45677888999999999999999999985
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.87 E-value=6.6e-21 Score=187.91 Aligned_cols=242 Identities=12% Similarity=0.020 Sum_probs=178.6
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.++.+...|++++++|+|..+.+++.+...++... +++.|++.||+|+|+++..+.++.+++.+..+++ +++
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a-------~~~ 97 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY-------PQS 97 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC-------cch
Confidence 36788899999999999999999987777777754 8999999999999999999999999999988764 467
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
+.+.+.|++.|+|.+..++.....+.+|||++|++++|+..++..+|..+.+.+...+.+.
T Consensus 98 ~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~------------------- 158 (393)
T PRK09705 98 ALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQH------------------- 158 (393)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-------------------
Confidence 8888899999999998887777888999999999999999988888888887776554431
Q ss_pred hhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccccccc
Q 016123 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (394)
Q Consensus 189 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (394)
..+||..+...+... ++..+..++ ..++
T Consensus 159 ------------------~~~w~~~~~~~~~~~----------------------------~~~~~~~~~----~~~~-- 186 (393)
T PRK09705 159 ------------------SETWYQTLAWWALPA----------------------------VVALFAWWW----QSAR-- 186 (393)
T ss_pred ------------------cCCHHHHHHHHHHHH----------------------------HHHHHHHHH----HhcC--
Confidence 125655432221100 000000001 1100
Q ss_pred ccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccce
Q 016123 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (394)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g 348 (394)
+++ ++ ++ ++ .+.++.+|++++|.+.+.+++.....
T Consensus 187 -~~~-----------~~-------------------~~-------~~-------~~~~~~l~~~~~~~l~~~~~~~~~~~ 221 (393)
T PRK09705 187 -EVA-----------SS-------------------HK-------TT-------TTPVRVVFTPRAWTLGVYFGLINGGY 221 (393)
T ss_pred -CCc-----------cc-------------------cC-------CC-------cCCcccccCHhHHHHHHHHHHHHHHH
Confidence 110 00 00 00 01134567889998888777665555
Q ss_pred eeeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 349 LAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 349 ~~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
..+.+.++++.++.|.+ ++....+++++++.+||++.|++.||++|
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~ 269 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDR 269 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 56778889999998886 36678899999999999999999999986
No 9
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.87 E-value=1.5e-20 Score=188.94 Aligned_cols=286 Identities=11% Similarity=0.058 Sum_probs=188.0
Q ss_pred CCCCcHHHHHHHHHHHHH-hcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQAI-SGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~-~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
+..++|.++.++++.+.. .+..+.++.+.|++++++|+|.++.+++.+...++.. .+++.|++.||+|+|++++.+.+
T Consensus 13 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 92 (455)
T TIGR00892 13 DGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGL 92 (455)
T ss_pred CCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHH
Confidence 346789888888777543 3445778899999999999999999997666555554 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHH-HHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
+..++.++++++ ++++.+++ .+++.|++.+....+....+.+|||++|++++|+..++.++|+.+.+++...
T Consensus 93 ~~~~~~~~~~~~-------~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~ 165 (455)
T TIGR00892 93 LASLGMILASFS-------SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQY 165 (455)
T ss_pred HHHHHHHHHHHh-------hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 888888877654 35666664 5688898888765666777889999999999999999999999999888776
Q ss_pred hcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHH
Q 016123 166 LFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSG 245 (394)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
+.+. .+||..+...+++.+..
T Consensus 166 l~~~--------------------------------------~gwr~~f~~~~~~~~~~--------------------- 186 (455)
T TIGR00892 166 LFES--------------------------------------FGWRGSFLILGGLLLHC--------------------- 186 (455)
T ss_pred HHHH--------------------------------------hChHHHHHHHHHHHHHH---------------------
Confidence 6542 34554443322110000
Q ss_pred HHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchH
Q 016123 246 ILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTI 325 (394)
Q Consensus 246 ~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 325 (394)
.+... . +++..+ +++.+. .++++..++ +. + . + ++.. .+......+.-.
T Consensus 187 --~v~~~-----~----~~~~~~-~~~~~~-~~~~~~~~~---~~--~-~----~---~~~~------~~~~~~~~~~~~ 234 (455)
T TIGR00892 187 --CVCGA-----L----MRPVGP-SQRVSK-SKSKEGLPP---DG--S-T----K---KLSK------KSTAEKINRFLD 234 (455)
T ss_pred --HHHHH-----H----hCCCCc-cccccc-ccccccCCC---CC--c-c----c---cccc------cchhhhhhhhcc
Confidence 00000 0 110000 000000 000000000 00 0 0 0 0000 000000001111
Q ss_pred HHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchh
Q 016123 326 FEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (394)
Q Consensus 326 ~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (394)
.+.+|+|.||.+.+..++...........++++.++.|++ +++...++.++++.++|++.|+++||.
T Consensus 235 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 235 FSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred hHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3688999999988887776666666677888899999887 467888899999999999999999973
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.86 E-value=1.4e-20 Score=190.25 Aligned_cols=261 Identities=14% Similarity=0.084 Sum_probs=170.3
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.+.++.+.|.+++++|+|..+.+++.+...++... .++.|++.||+|+|+++..+.++.+++.++.+++ .++
T Consensus 52 ~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-------~s~ 124 (476)
T PLN00028 52 TFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-------SSA 124 (476)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------cCH
Confidence 46777888999999999999999977767777765 7999999999999999999999888888776654 357
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 187 (394)
+.+++.|++.|++.+.. .+....+.+||| ++||+++|+..+...+|+.+.+.+...+.. .
T Consensus 125 ~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~------------------~ 185 (476)
T PLN00028 125 TGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFP------------------L 185 (476)
T ss_pred HHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHH------------------H
Confidence 77777899999887753 445566889998 479999999987666666665544322210 0
Q ss_pred hhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccc
Q 016123 188 GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (394)
Q Consensus 188 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (394)
+ ..... . ...+||..+...+.+.+.. ..... . +.++
T Consensus 186 ~----~~~~~---~----~~~gWr~~f~i~g~l~l~~---------------------------~l~~~-~----~~~~- 221 (476)
T PLN00028 186 I----KDAGA---P----SFTAWRIAFFVPGLLHIIM---------------------------GILVL-T----LGQD- 221 (476)
T ss_pred H----HhcCC---c----chhhhHHHHHHHHHHHHHH---------------------------HHHHH-H----HcCc-
Confidence 0 00000 0 0247887665443221110 00000 0 1111
Q ss_pred cccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccc
Q 016123 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (394)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~ 347 (394)
+|+.+ .++ . + .+++ .+ + ......+++.++++++|++++.+++..+.
T Consensus 222 --~p~~~--------~~~---~----------~---~~~~------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (476)
T PLN00028 222 --LPDGN--------YRE---L----------K---KSGT------MP-K-DSFSKVLRYGVTNYRTWILALTYGYSFGV 267 (476)
T ss_pred --CCCCc--------hhh---H----------H---hcCc------cc-c-ccHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 11000 000 0 0 0000 00 0 00113467889999999999888776665
Q ss_pred eeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 348 GLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 348 g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
...+.+.++++..+ .|++ ++..+.++..+++.+||+++|+++||++|
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~ 317 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAAR 317 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 55556667777655 5886 46678889999999999999999999864
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=99.85 E-value=7.5e-20 Score=179.99 Aligned_cols=260 Identities=8% Similarity=-0.014 Sum_probs=178.5
Q ss_pred CCcHHHHHHHHHHHHHh-cccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAIS-GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~-g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
.++|..+....+..+.. ...|....+.|++++++|+|+++.+++.+...++.. .+++.|++.||+|+|+++..+.++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 5 KVAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 45665444333333222 223444456789999999999999997777666664 5789999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++...+.++ ++++.+++.|++.|++.+..++...+.+.+++| ++||+++|+...+.++|..+.+++...+.
T Consensus 85 ~~~~~~~~~~-------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~ 157 (390)
T PRK03545 85 IASHVLSALA-------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG 157 (390)
T ss_pred HHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9998877654 478888889999999888777777788899998 58999999999999999988888776554
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHH
Q 016123 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGIL 247 (394)
Q Consensus 168 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (394)
+ ..+||..+...+.+.+.
T Consensus 158 ~--------------------------------------~~gw~~~f~~~~~~~~l------------------------ 175 (390)
T PRK03545 158 Q--------------------------------------YLGWRTTFLAIGGGALI------------------------ 175 (390)
T ss_pred H--------------------------------------HhcHHHHHHHHHHHHHH------------------------
Confidence 3 34677655333211000
Q ss_pred HHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHH
Q 016123 248 IILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE 327 (394)
Q Consensus 248 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 327 (394)
........ ++ +++ ++++ ++ ..+.++
T Consensus 176 ---~~~~~~~~----~~----~~~----------~~~~--------------------~~--------------~~~~~~ 200 (390)
T PRK03545 176 ---TLLLLIKL----LP----LLP----------SEHS--------------------GS--------------LKSLPL 200 (390)
T ss_pred ---HHHHHHHh----CC----CCC----------CCCc--------------------ch--------------HHHHHH
Confidence 00000000 11 000 0000 00 113467
Q ss_pred HhhchhHHHHHHHHHhcccceeeeeeChHHHHHH-hCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 328 AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 328 ~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~-~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+|++.+|..++..++.........+.+.++.++ .|.+. .....+++++.+.+|+++.|+++||++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~ 270 (390)
T PRK03545 201 LFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPS 270 (390)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 8999999877666555444444444566777776 46653 5677888999999999999999999875
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.85 E-value=5.1e-20 Score=181.86 Aligned_cols=153 Identities=15% Similarity=0.021 Sum_probs=127.7
Q ss_pred CcCCCCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHH
Q 016123 7 YTSSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIG 84 (394)
Q Consensus 7 ~~~~~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g 84 (394)
-+..+++|.++..+++..+..+. .+..+...|.+.+++|+|..+.+++.+...++..+ +++.|++.||+|+|+++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 86 (406)
T PRK11551 7 SASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVS 86 (406)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 35677899988888877766554 56778888999999999999999987777777765 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHH
Q 016123 85 SLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
.++..++.++..+. ++++.+.+.+++.|++.+..++.....+.+++| ++||+++|+...+..+|+.+.+.+.
T Consensus 87 ~~~~~~~~~~~~~~-------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 87 VALFGLFSLATAQA-------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888887766543 367788889999999998887777888999998 5799999999999999988887665
Q ss_pred Hhh
Q 016123 164 SAL 166 (394)
Q Consensus 164 ~~~ 166 (394)
..+
T Consensus 160 ~~~ 162 (406)
T PRK11551 160 VLA 162 (406)
T ss_pred HHH
Confidence 444
No 13
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.84 E-value=6.7e-20 Score=182.13 Aligned_cols=150 Identities=16% Similarity=0.138 Sum_probs=121.7
Q ss_pred CcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
.+|..+..+.+.....+. .+..+...|.+++++|+|..+.+++.+...++..+ +++.|++.||+|+|+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 445555555555555443 33445667788999999999999987777777765 8999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
++.+...++ ++++.+++.|++.|++.+..++.....+.+++|+ +|+++.|+...+.++|..+.+.+...+.+
T Consensus 95 ~~~~~~~~~-------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~ 167 (426)
T PRK12307 95 VGTGLSGLA-------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE 167 (426)
T ss_pred HHHHHHHHH-------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc
Confidence 998877664 4678888899999999998888888889999985 69999999999999999988877666544
No 14
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.84 E-value=1.2e-19 Score=178.25 Aligned_cols=172 Identities=16% Similarity=0.140 Sum_probs=136.5
Q ss_pred CCCCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
-++++|..+....+.....+. .+..+...|++++++|+|..+.+++.+...++.. .+++.|++.||+|||+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 456888887777776665554 4567788899999999999999997777777765 48999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
+.+++.++..+. ++++.+++.+++.|++.+..+......+.+++| ++|+++.|+..++.++|..+.+.+...
T Consensus 86 ~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 86 LFSAGTLACGFA-------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888877654 468888889999999999888888888999998 579999999999999999988887776
Q ss_pred hcCCC--hhHHHHHHHHHHHHHHH
Q 016123 166 LFADD--PAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 166 ~~~~~--~~~~~~~~~~~~~~v~~ 187 (394)
+.+.. .|+..+.+++++.++.+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHH
Confidence 65432 25555554444444333
No 15
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.84 E-value=2.2e-20 Score=178.28 Aligned_cols=283 Identities=15% Similarity=0.094 Sum_probs=196.6
Q ss_pred CCcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+.||.+++..++...+.- +.-.|++-.|+++++.++|.+|++.+.+...+..-+ -.+.|.+.||.++|+.+.+|.++.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLils 104 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILS 104 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHH
Confidence 344445554444443322 345788889999999999999999988888777755 689999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHH--Hh
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLC--SA 165 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~--~~ 165 (394)
++..+++.+. ++++.+.+..++.|.-+|+..+++..++.+|||+ +||+..++-++...+|+++.+++. ..
T Consensus 105 ai~nil~Gfs-------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~ 177 (448)
T COG2271 105 AIVNILFGFS-------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAF 177 (448)
T ss_pred HHHHHHHhhh-------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHH
Confidence 9999988764 4677777788889998998888999999999996 699999999999999999999988 44
Q ss_pred hcCC-ChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHH
Q 016123 166 LFAD-DPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFS 244 (394)
Q Consensus 166 ~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (394)
+... +++..+++-+++..+++++..+..|+.|++. |.
T Consensus 178 ~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~--------GL---------------------------------- 215 (448)
T COG2271 178 FAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE--------GL---------------------------------- 215 (448)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc--------CC----------------------------------
Confidence 4433 2233344444444455555555555555431 10
Q ss_pred HHHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcch
Q 016123 245 GILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHT 324 (394)
Q Consensus 245 ~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 324 (394)
+++|+-.++++ +. .+ ++. +.++....+.=
T Consensus 216 ------------------------------P~ie~~~~d~~---e~--------~~---~~~-------~~~~ls~~~i~ 244 (448)
T COG2271 216 ------------------------------PPIEEYRGDPL---EI--------YE---EEK-------ENEGLTAWQIF 244 (448)
T ss_pred ------------------------------CCHHHhhcCch---hh--------hh---hhc-------cCCCccHHHHH
Confidence 11111100000 00 00 000 00011111223
Q ss_pred HHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 325 IFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 325 ~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.+-.+|||..|++.++.++.-..=.++..=.+-++.+ .|++ ++....+++=++...|-+++||+|||+-
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklf 316 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLF 316 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3456789999999999888755555555555555544 5676 5778999999999999999999999975
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.84 E-value=7.5e-20 Score=177.97 Aligned_cols=264 Identities=16% Similarity=0.142 Sum_probs=184.1
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+.++...|.+++++|+|..+.+++.+...++... .++.|++.||+|||+++.++.++.+++....++. ++++
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~ 83 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-------GAYV 83 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-------cCHH
Confidence 4566777889999999999999987777777764 8999999999999999999999998888877654 3688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHH-HHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV-PFVVCL 187 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~-~~~v~~ 187 (394)
.+++.+++.|++.+...+.....+.+++| ++|++++|+.....++|..+.+++...+.+...|+..+.+..+ ..+..+
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGV 163 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 88889999999999888888889999998 5799999999999999999998887776653323332222221 111122
Q ss_pred hhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccc
Q 016123 188 GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (394)
Q Consensus 188 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (394)
+..+..|++|++...
T Consensus 164 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 178 (399)
T TIGR00893 164 LWLKFIPDPPQKAKW----------------------------------------------------------------- 178 (399)
T ss_pred HhhheecCCCCcccc-----------------------------------------------------------------
Confidence 222222222211100
Q ss_pred cccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccc
Q 016123 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (394)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~ 347 (394)
+ .++++.... .+. .+ +.+ ++++...+..+.++.+|++++|.+.+..++....
T Consensus 179 ------~--~~~~~~~~~--~~~--------~~----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T TIGR00893 179 ------L--TEEEKYIVV--GGL--------LA----EQQ------GKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIG 230 (399)
T ss_pred ------C--CHHHHhhcc--hhh--------cc----ccc------cccccCCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence 0 000000000 000 00 000 0000011234568899999999999998888877
Q ss_pred eeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 348 GLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 348 g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
...+....+.+.++ .|.+ +.....++..+.+.+++++.|+++||++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 280 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLR 280 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77777778888765 5665 35678888999999999999999999886
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.84 E-value=1e-19 Score=177.91 Aligned_cols=242 Identities=14% Similarity=0.045 Sum_probs=161.7
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+.++...|++++++|+|.+|.+++.+...++.. .+++.|++.||+|||+++..+......+.. .... . ++++
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~--~----~~~~ 80 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD--P----FNYE 80 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH--h----ccHH
Confidence 456778899999999999999998777777775 489999999999988876554444333322 2111 1 3678
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
.+.+.|++.|+|.+. +.+.....++|+| ++|++++++..++..+|..+.+.+...+.+
T Consensus 81 ~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-------------------- 139 (368)
T TIGR00903 81 WLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-------------------- 139 (368)
T ss_pred HHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 888899999999985 4556666789998 579999999999999999999777666543
Q ss_pred hhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccccccc
Q 016123 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (394)
Q Consensus 189 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (394)
..+||..+...+++.+.. ..+... .++ +
T Consensus 140 ------------------~~gWr~~f~~~~~l~~~~----------------------------~~~~~~---~lp-~-- 167 (368)
T TIGR00903 140 ------------------AGGLQLLIIPIAAVAAAG----------------------------IILVLA---ALP-A-- 167 (368)
T ss_pred ------------------ccchHHHHHHHHHHHHHH----------------------------HHHHHH---HcC-C--
Confidence 357776554433221110 000000 011 1
Q ss_pred ccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccce
Q 016123 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (394)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g 348 (394)
+|+. +.+. . +.. + . ...+++.+|+|++|.+++..++.....
T Consensus 168 -~p~~--------~~~~---~---------------~~~------~---~---~~~~~~ll~~~~~~~~~~~~~~~~~~~ 208 (368)
T TIGR00903 168 -LPFQ--------AAEG---F---------------GFK------D---A---VKEFGALAGRKDLWIIGAILGFGVALF 208 (368)
T ss_pred -CCCC--------CCCC---c---------------chH------H---H---HHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 1100 0000 0 000 0 0 013678999999999999999988888
Q ss_pred eeeeeChHHHHHHhCCCc-chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 349 LAVMNNMGQIGLALGYVD-VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 349 ~~~~~n~~~i~~~~G~~~-~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
..+.+-+++++++.|++. ..... .+....|-+..++++||+.|
T Consensus 209 ~~~~~wlp~~L~~~g~s~~~~~~~---~l~~~~g~~g~~~~~d~~~r 252 (368)
T TIGR00903 209 DNLAIWLEAALRPAGLEDIAGDAV---ALAILAGLIGVAVIPDRVAR 252 (368)
T ss_pred HHHHHHHHHHHHHCCCChHHHHHH---HHHHHHHHHHHHHhhHHhhh
Confidence 888888999999988763 22333 33344455556899999754
No 18
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.83 E-value=7.8e-20 Score=183.58 Aligned_cols=148 Identities=16% Similarity=0.043 Sum_probs=111.4
Q ss_pred CcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
++|.++...++...... ..+.++...|.++++ |+|+.+.+++.+...++.. .+++.|++.||+|+|++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 45665544444333222 234466778888888 9999999997777777765 48999999999999999999999998
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHH
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
++.+.+++.... ..+++.+++.+++.|++.+..+.+....+.+|||+ +||+++|+...+..+|+.+.+++.
T Consensus 105 i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~ 176 (452)
T PRK11273 105 AVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLF 176 (452)
T ss_pred HHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 888877654211 12466677788899988887766667788899985 699999999999988876666654
No 19
>PRK03699 putative transporter; Provisional
Probab=99.83 E-value=2.9e-19 Score=176.19 Aligned_cols=151 Identities=12% Similarity=0.085 Sum_probs=122.6
Q ss_pred CCCcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHH
Q 016123 10 SAGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLE 87 (394)
Q Consensus 10 ~~~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~ 87 (394)
+.+||+....+++..+..+ ..+.++...|++++++|+|.++.+++.+...++..+ .++.|++.||+|+|+++.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 2 NSNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3466766666666555544 356788899999999999999999977777777755 78999999999999999999998
Q ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 88 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
..++..+..+. ++++.+++.+++.|++.+..+......+.+++|+ +||.++++..+..++|+.+.+.+...+
T Consensus 82 ~~i~~~l~~~~-------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 82 MILAVAGLMFS-------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHc-------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877653 4677888889999998887777777888999985 699999999888889888888776655
Q ss_pred c
Q 016123 167 F 167 (394)
Q Consensus 167 ~ 167 (394)
+
T Consensus 155 ~ 155 (394)
T PRK03699 155 L 155 (394)
T ss_pred H
Confidence 4
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=99.83 E-value=7.3e-20 Score=178.91 Aligned_cols=182 Identities=20% Similarity=0.159 Sum_probs=139.1
Q ss_pred CCCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHH
Q 016123 10 SAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLE 87 (394)
Q Consensus 10 ~~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~ 87 (394)
.+++|..+..+++..+..+. .+.++.+.|.+.+++|++..+.+++.+...++... .++.|++.||+|+|+.+.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 34566666666655554443 35667788899999999999999977777777654 79999999999999999999998
Q ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 88 GLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 88 ~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
.+++..+..+. ++++.+++.+++.|++.+..+......+.+++|+ +|+++.|+...+..+|..+.+.+...+
T Consensus 92 ~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 92 FSVFTLLCALA-------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHHHHHHc-------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 88888776543 3677778889999999988888888899999984 799999999999999999998888777
Q ss_pred cCCChhHHHHHHH-HHHHHHHHhhhhcccccCC
Q 016123 167 FADDPAKFLFMLA-IVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~p~ 198 (394)
.+...|+..+.+. +...+..++..+++|++|+
T Consensus 165 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 165 IPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred hhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 7654454433333 4555555555556666554
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.83 E-value=8.2e-19 Score=173.12 Aligned_cols=157 Identities=9% Similarity=-0.017 Sum_probs=125.6
Q ss_pred ccCcCCCCcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHH
Q 016123 5 VSYTSSAGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILL 82 (394)
Q Consensus 5 ~~~~~~~~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~ 82 (394)
.+++..|+.|..+........+.. ..|....+.|++.+++|+|+++.++..+...++.. .+++.|++.||+|||+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~ 89 (394)
T PRK10213 10 GADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVI 89 (394)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHH
Confidence 345566778876655555433332 34554456788999999999999996666666664 5899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHH
Q 016123 83 IGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTD 161 (394)
Q Consensus 83 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~ 161 (394)
.+.++.+++..+..+. ++++.+++.|++.|++.+..++.....+.+++| ++|+++.++..++.++|..+.++
T Consensus 90 ~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 90 LFAVLLTLSCLLVSFA-------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred HHHHHHHHHHHHHHHH-------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988876653 468899999999999999887788888899998 57999999999999999998888
Q ss_pred HHHhhcC
Q 016123 162 LCSALFA 168 (394)
Q Consensus 162 i~~~~~~ 168 (394)
+...+.+
T Consensus 163 l~~~l~~ 169 (394)
T PRK10213 163 LGSFLGE 169 (394)
T ss_pred HHHHHHh
Confidence 8776654
No 22
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.82 E-value=4.6e-19 Score=180.34 Aligned_cols=190 Identities=13% Similarity=0.050 Sum_probs=138.9
Q ss_pred CcHHHHHHHHHHHHHhccc-ccchhcHHHHHHHc-----CCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGNN-YTFSNYSDALKTLM-----NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIG 84 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~-y~~~~~~~~l~~~~-----g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g 84 (394)
+++.++..+.+..+..|.. ...+...|.+.+++ +.+..+.+++.....++... .++.|++.||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3444444444444444432 23344556665542 34556667777777777765 79999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHH
Q 016123 85 SLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
.++..++.++.+++... .+..+++.++++|++.|++.|..++....++++++| ++||+++++......+|..+.+.+.
T Consensus 93 ~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 93 LIIMIIATVASGLSPGS-SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHccCc-ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888776654111 000125678889999999999988888999999999 5699999999999888887776655
Q ss_pred HhhcC-----------------------CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCc
Q 016123 164 SALFA-----------------------DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV 202 (394)
Q Consensus 164 ~~~~~-----------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~ 202 (394)
..+.. ++.||.++++++++.++.++..+++||+|++...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~ 233 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTAD 233 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 43321 1359999999999999988888999999998653
No 23
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.82 E-value=1.2e-19 Score=175.93 Aligned_cols=129 Identities=18% Similarity=0.143 Sum_probs=110.9
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
...++...|.+++++|+|..+.+++.+...++... .++.|++.||+|+|+++.++.++.+++.++..++ +++
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 83 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-------TSL 83 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-------hhH
Confidence 35667778889999999999999987777777765 8999999999999999999999999988887764 367
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
+.+++.+++.|++.+..++.....+.+++|+ +|+++.|+...+..+|..+.+++...
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH
Confidence 8888899999999988888888899999985 79999999999999999988854433
No 24
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=7.7e-19 Score=170.59 Aligned_cols=266 Identities=15% Similarity=0.133 Sum_probs=171.1
Q ss_pred cccchhcHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCc-
Q 016123 30 NYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL- 106 (394)
Q Consensus 30 ~y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~- 106 (394)
.+.++.+.|. +++++|+|..+.+++.+...++..+ .++.|++.||+|+|+.+.++.++..++.+.+.+. +
T Consensus 17 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-------~~ 89 (366)
T TIGR00886 17 WFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-------VQ 89 (366)
T ss_pred HHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------hh
Confidence 4567778885 8999999999999987777777764 8999999999999999999999999998887654 3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v 185 (394)
+++.+++.+++.|++.+. +.+....+.+|+| ++|+++.++......+|..+.+.+...+...
T Consensus 90 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~---------------- 152 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGS---------------- 152 (366)
T ss_pred hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHH----------------
Confidence 677888889999988654 4566788899998 5799999998866666665555443332210
Q ss_pred HHhhhhcccccCCCCCccccccccchhHh-HHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccc
Q 016123 186 CLGAIFFLRETTPASTVDEEKEEAKYFSI-INTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIK 264 (394)
Q Consensus 186 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~ 264 (394)
+.+..+ +....+||..+ ...+.+... +....... .+
T Consensus 153 ------~~~~~~------~~~~~~w~~~~~~~~~~~~~~---------------------------~~~~~~~~----~~ 189 (366)
T TIGR00886 153 ------LIFGAG------LPAHLAWGWAFVIVPAGILLL---------------------------PALLIFFV----GA 189 (366)
T ss_pred ------HHhccc------ccccccccchhHHHHHHHHHH---------------------------HHHHHHHh----cc
Confidence 000000 00134677654 211111000 00000000 11
Q ss_pred ccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhc
Q 016123 265 SWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCG 344 (394)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~ 344 (394)
++|++.+. + ++.+. +++ ... . ++ ....+.++.+|+|++|.+.+.+++.
T Consensus 190 -~~~~~~~~----~--~~~~~---~~~-------------~~~--~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (366)
T TIGR00886 190 -DTPPGKPA----T--GKLSF---KGA-------------RWS--V---GT----GALGDQLKVFRDRHTWILALLYSVT 237 (366)
T ss_pred -cCCccccc----c--hhccc---ccc-------------ccc--c---cc----hhHHHHHHHHhccchhhHHHHHHHH
Confidence 11110000 0 00000 000 000 0 00 0011457889999999999888877
Q ss_pred ccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 345 VGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 345 ~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+....+.+..+++.++ .|.+ ++..+.++..+.+.++|+++|+++||++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~ 290 (366)
T TIGR00886 238 FGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGG 290 (366)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhcc
Confidence 66666666777778765 4766 35567888899999999999999999986
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.82 E-value=3.4e-18 Score=173.72 Aligned_cols=314 Identities=14% Similarity=0.051 Sum_probs=197.6
Q ss_pred CcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
|+|.++...++..+.... ....++-.|++.+++|.+..+.+|+.+...++.. ..++.|++.||+|||++++++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 466665555554443322 3455667899999999999999998777777765 48999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhc-c-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF-R-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F-p-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++.+.++.+ ++++.++++|++.|+|.+..++.....+.++| | ++|+++.|+..+..++|..+.+.+...+.
T Consensus 83 ~~~~~~~~a-------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 83 LASLAAAFS-------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHc-------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999887764 47888999999999999887766677777888 4 57999999999999999999999888888
Q ss_pred CCChhHHHHHHHHHHHHHHH-hhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHH
Q 016123 168 ADDPAKFLFMLAIVPFVVCL-GAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGI 246 (394)
Q Consensus 168 ~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 246 (394)
+...|++.+++.....++.+ +..+.+|+.|++.. ++.++.........+.+..|.... .... ..+... +.
T Consensus 156 ~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~----~~~d~~g~~~~~~~~~~l~~~~~~--~~~~-~~~~~~--~~ 226 (495)
T PRK14995 156 EHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD----QPLNLGHALMLIVAILLLVYSAKT--ALKG-FLSLWV--TS 226 (495)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC----CCCChHhHHHHHHHHHHHHHHHHh--cccc-CCchHH--HH
Confidence 77677776666554444333 33444555443211 112221111111100000111000 0000 000000 00
Q ss_pred HHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHH
Q 016123 247 LIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIF 326 (394)
Q Consensus 247 ~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 326 (394)
..+ +.....+.. . ... |.. .+.| .-..
T Consensus 227 ~~~-~~~~~~l~~-f-~~~---------------------------------------e~~------~~~p-----~~~~ 253 (495)
T PRK14995 227 LTL-LTGALLLGL-F-IRT---------------------------------------QLA------ASRP-----MIDM 253 (495)
T ss_pred HHH-HHHHHHHHH-H-HHH---------------------------------------Hhc------CCCC-----CcCH
Confidence 000 000000000 0 000 000 0011 1125
Q ss_pred HHhhchhHHHHHHHHHhcccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 327 EAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 327 ~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
+.+|+|.|+...+..++...........++.+.+. .|++ ++..+....++...++.++.|++.||++|
T Consensus 254 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~ 324 (495)
T PRK14995 254 RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGL 324 (495)
T ss_pred HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 68899999887777666555444444555666665 5776 46678888999999999999999999985
No 26
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.81 E-value=1.4e-18 Score=173.48 Aligned_cols=152 Identities=11% Similarity=-0.096 Sum_probs=105.4
Q ss_pred CCCCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcC---CChhhhHHH---HHHHHhhhhh-hhhhHhhhhccCchHH
Q 016123 9 SSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMN---LTQLELNNL---SVVKDIGKAF-GLLAGLASDRIPAPII 80 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g---~s~~~~~~~---~~~~~~~~~~-~~~~G~l~Dr~G~r~~ 80 (394)
+++++|..+..+.+....... .+.++...|.+.++++ .+..+.+.. .....++..+ +++.|++.||+|||++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 16 DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 445666555555554444332 4457778888999984 555544332 2233333333 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHH
Q 016123 81 LLIGSLEGLVGYGAQWLVVSRKI--QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTA 157 (394)
Q Consensus 81 ~~~g~~~~~~g~~~~~~~~~~~~--~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~ 157 (394)
+.++.++++++.++.+++. +.. ...++..+.+.|++.|+|.|..++...+.+.||+| ++||++.++...+...|..
T Consensus 96 l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~ 174 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLP-GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQL 174 (432)
T ss_pred HHHHHHHHHHHHHHHhhcC-CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH
Confidence 9999999999988876541 000 00123457779999999999888888999999998 5799999988777666655
Q ss_pred HHHH
Q 016123 158 IFTD 161 (394)
Q Consensus 158 i~~~ 161 (394)
+.+.
T Consensus 175 ~~~~ 178 (432)
T PRK10406 175 LALL 178 (432)
T ss_pred HHHH
Confidence 5443
No 27
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.81 E-value=1.5e-18 Score=172.51 Aligned_cols=277 Identities=13% Similarity=0.070 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHH-HhcccccchhcHHHHHH-HcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCchHHHHHHHHHHHH
Q 016123 14 WLGFVTAVWVQA-ISGNNYTFSNYSDALKT-LMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLV 90 (394)
Q Consensus 14 w~~l~~~~~~~~-~~g~~y~~~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~~ 90 (394)
|+.+..+.+... +...-+.++...+.+.+ ++|+|++|.+++.+...+.. +..++.|++.||+|+|+++.++.++..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 445555554432 22234667777777765 89999999999666555554 4568889999999999999999999998
Q ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
..+..+++..+.. ++++.+++.+++.|++ +..+.+....+++|||+ +||+++|+..+...+|..+...+...+..
T Consensus 113 ~~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~- 188 (462)
T PRK15034 113 PCVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF- 188 (462)
T ss_pred HHHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH-
Confidence 8887776432211 4688999999999998 55778899999999995 69999999976555666655544332210
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHH
Q 016123 170 DPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILII 249 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (394)
..+...+--...+... ....+++........+ . +
T Consensus 189 ---------------~~l~~~~G~~~~~~~~----g~~~~~~~~~~~~~~~--------~------------------i- 222 (462)
T PRK15034 189 ---------------VPVFAFLGVNGVPQAD----GSVMSLANAAWIWVPL--------L------------------A- 222 (462)
T ss_pred ---------------HHHHHHhccccccccc----cchHHHHHHHHHHHHH--------H------------------H-
Confidence 0000001000000000 0133455433222110 0 0
Q ss_pred HHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHh
Q 016123 250 LLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAM 329 (394)
Q Consensus 250 ~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l 329 (394)
+...+... ..+ +. +.++ .+ -...++.+
T Consensus 223 -v~~i~~~~----~~~----~~----------~~~~--------------------~~--------------~~~~~~vl 249 (462)
T PRK15034 223 -IATIAAWS----GMN----DI----------ASSR--------------------AS--------------IADQLPVL 249 (462)
T ss_pred -HHHHHHHH----hCC----Cc----------cccc--------------------cC--------------HHHHHHHh
Confidence 00000000 110 00 0000 00 01346789
Q ss_pred hchhHHHHHHHHHhcccceeeeeeChHHHHHHhCCCcc--hhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 330 WTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVDV--SIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 330 ~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~~~--a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
|+|+-|++.+.+++..+....+.+.++++.++ .+++. .....+..+...++|.+.|+++||+|+
T Consensus 250 k~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~ 315 (462)
T PRK15034 250 QRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGG 315 (462)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCc
Confidence 99999999999999988888787778888776 34432 223445678899999999999999986
No 28
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.81 E-value=3.8e-19 Score=179.09 Aligned_cols=251 Identities=10% Similarity=0.031 Sum_probs=169.8
Q ss_pred HcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhh
Q 016123 43 LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 43 ~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (394)
+++++..+.+++.+...++... +++.|++.||+|+|+++.++.++.+++.++..+... .+++.+++.|++.|++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG-----GGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH-----cCchHHHHHHHHHHHh
Confidence 7899999999987777777765 899999999999999999999988888776544321 2466677889999999
Q ss_pred hhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCC
Q 016123 122 TTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPAS 200 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~ 200 (394)
.+..++.....+.+|+| ++||+++|+..++..+|..+.+++...+.+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~------------------------------ 194 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW------------------------------ 194 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------------------
Confidence 99888888899999998 57999999999999999999988877665421
Q ss_pred CccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccccCCCCCCchhh
Q 016123 201 TVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQ 280 (394)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (394)
.+||..+...+++.+.. .++.. . +.+++|++.+.+.+.|.
T Consensus 195 -------~gw~~~f~i~~~~~~~~-----------------------~~~~~-----~----~~~~~p~~~~~~~~~~~- 234 (465)
T TIGR00894 195 -------GGWPMIFYVFGIVGCAW-----------------------SLLWF-----V----FPADDPSIHPCISKFEK- 234 (465)
T ss_pred -------CCCCeehhhhhHHHHHH-----------------------HHHHH-----H----HhcCCcccCCCCCHHHH-
Confidence 24554432222110000 00000 0 00011111000000000
Q ss_pred hcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHH
Q 016123 281 QVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL 360 (394)
Q Consensus 281 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~ 360 (394)
+. .++. .+. ++.+. .+...+++.+|++.+|.+.+..++.......+...++.+++
T Consensus 235 ---~~------------------i~~~--~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 289 (465)
T TIGR00894 235 ---KY------------------INSS--LQG-QKGST-RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFIS 289 (465)
T ss_pred ---HH------------------HHhh--ccc-ccCCC-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000 000 00000 11235789999999999999888877766667778888876
Q ss_pred H-hCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 361 A-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 361 ~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
+ +|.+ +.....++..+++.+++++.|+++||++
T Consensus 290 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~ 325 (465)
T TIGR00894 290 WVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLK 325 (465)
T ss_pred HHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 5776 3567778889999999999999999875
No 29
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.80 E-value=7.1e-19 Score=175.88 Aligned_cols=283 Identities=16% Similarity=0.096 Sum_probs=176.5
Q ss_pred cHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHH
Q 016123 13 KWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLV 90 (394)
Q Consensus 13 ~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~ 90 (394)
+|..+...++...... ....+....|.+++ +|.|+.+.+++.+...++... .++.|++.||+|+|+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4555444444433322 23445555676765 699999999977777777754 89999999999999999999998888
Q ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
+.+...... . . ..+++.+++.+++.|++.+..+.+....+.+||| ++||+++|+..++.++|+.+.+++.......
T Consensus 104 ~~~~~~~~~-~-~-~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~ 180 (438)
T TIGR00712 104 VMLLMGFVP-W-A-TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW 180 (438)
T ss_pred HHHHHhccc-c-c-cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH
Confidence 877654421 0 0 1246667778889998888877777788889997 5799999999999999999988876654432
Q ss_pred -ChhHHHHHH-HHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHH
Q 016123 170 -DPAKFLFML-AIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGIL 247 (394)
Q Consensus 170 -~~~~~~~~~-~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (394)
..|+..+.+ ++...+..++..+++|+.|++...
T Consensus 181 ~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------------------------- 215 (438)
T TIGR00712 181 FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL--------------------------------------------- 215 (438)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC---------------------------------------------
Confidence 123222222 222222222222222222211000
Q ss_pred HHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHH
Q 016123 248 IILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE 327 (394)
Q Consensus 248 ~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 327 (394)
++. ++.+.+.+ .+. .+++ ++ +...++...++
T Consensus 216 -----------------------~~~----~~~~~~~~--~~~-------------~~~~------~~-~~~~~~~~~~~ 246 (438)
T TIGR00712 216 -----------------------PPI----EEYRNDYP--DDY-------------NEKA------EQ-ELTAKEIFMQY 246 (438)
T ss_pred -----------------------CCc----hhcccccc--ccc-------------cccc------cc-ccchHHHHHHH
Confidence 000 00000000 000 0000 00 00001112235
Q ss_pred HhhchhHHHHHHHHHhcccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 328 AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 328 ~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.+|++.+|.+.+..++.......+...++.+.++ .|.+ .+.+..+++++.+.+|++++|+++||++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 315 (438)
T TIGR00712 247 VLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF 315 (438)
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999887766655545566788888887 4766 3567788899999999999999999984
No 30
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.80 E-value=1.3e-18 Score=182.31 Aligned_cols=185 Identities=13% Similarity=0.078 Sum_probs=150.6
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+++|.+++...+..+..+. ....+...|.+++++|++..+.+++.+...++.++ +++.|++.||+|||++++++.++.
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4567666665555554443 34566778899999999999999987777888765 799999999999999999999998
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++.++.+++ ++++.++++|++.|+|.+..++....++.+++| ++||+++++..++..+|+++.+.+...+.
T Consensus 243 ~i~~ll~afa-------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 243 GFFAFFSSFV-------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred HHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777654 367888889999999999888888899999999 56999999999999999888877655443
Q ss_pred CC-------------ChhHHHHHHHHHHHHHHHhhhhcccccCCCCCc
Q 016123 168 AD-------------DPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV 202 (394)
Q Consensus 168 ~~-------------~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~ 202 (394)
+. ..|+.++++++++.++.++..+++|++|++...
T Consensus 316 ~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~ 363 (742)
T TIGR01299 316 PHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE 363 (742)
T ss_pred HhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 21 357888888999999998889999999998653
No 31
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.80 E-value=1.7e-18 Score=173.11 Aligned_cols=163 Identities=17% Similarity=0.064 Sum_probs=126.3
Q ss_pred chhcHHHHHHHcCCC--------hhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016123 33 FSNYSDALKTLMNLT--------QLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (394)
Q Consensus 33 ~~~~~~~l~~~~g~s--------~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (394)
.+...+.+.++++.+ ..+.+++.+...++.. .+++.|++.||+|||++++++.++..++..+......
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~--- 123 (481)
T TIGR00879 47 IGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF--- 123 (481)
T ss_pred hhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 344456666666665 8899997777777775 4899999999999999999999999988887754311
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHH---HhhcCCChhHHHHHHH
Q 016123 104 QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLC---SALFADDPAKFLFMLA 179 (394)
Q Consensus 104 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~---~~~~~~~~~~~~~~~~ 179 (394)
..+++.+++.|++.|+|.+..+......+.+++| ++|++++++...+..+|..+.+.+. ....+...|+..+.++
T Consensus 124 -~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~ 202 (481)
T TIGR00879 124 -ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQ 202 (481)
T ss_pred -ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHH
Confidence 1245677889999999999888888889999998 5799999999999999999888877 3333445677777777
Q ss_pred HHHHHHHHhhhhcccccCCC
Q 016123 180 IVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 180 ~~~~~v~~~~~~~~~~~p~~ 199 (394)
++..++.++..+++|+.|+.
T Consensus 203 ~~~~~~~~~~~~~l~~~~~~ 222 (481)
T TIGR00879 203 LIPAGLLFLGLFFLPESPRW 222 (481)
T ss_pred HHHHHHHHHHHhcCCCChHH
Confidence 77777777777777776643
No 32
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.80 E-value=2.8e-18 Score=166.49 Aligned_cols=241 Identities=12% Similarity=0.043 Sum_probs=171.1
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+++...|++++++|+|.++.+++.+...++..+ +++.|++.||+|+|+++.++.++..++.... .. ++.+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~-------~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SA-------PGTA 88 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hh-------ccHH
Confidence 4567789999999999999999987777777764 8999999999999999999998887776654 22 3567
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 189 (394)
.+.+.+++.|+|.+.........+.+++|++|++++|+..++.++|..+.+.+...+.+..
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~------------------- 149 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHS------------------- 149 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------------------
Confidence 7777899999998877666667788999999999999999999999888877765543210
Q ss_pred hhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 016123 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (394)
Q Consensus 190 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (394)
..+||..+...+++.+. ..+... |. .+
T Consensus 150 -----------------~~~w~~~f~~~~~~~~~------------------------~~~~~~----~~---~~----- 176 (355)
T TIGR00896 150 -----------------GGHWQQALAWWALPALL------------------------ALLAWI----PQ---VR----- 176 (355)
T ss_pred -----------------hhhHHHHHHHHHHHHHH------------------------HHHHHh----hh---hc-----
Confidence 12366544322211000 000001 10 00
Q ss_pred cCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhccccee
Q 016123 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (394)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~ 349 (394)
++ .++ +.+ + + +.+.++.+|+|.+|.+.+..++......
T Consensus 177 ~~-----------~~~-------------------~~~------~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (355)
T TIGR00896 177 RR-----------VAA-------------------NQT------T--T----RLTPVRIWRSPLAWQVTVFFGLQSGLYY 214 (355)
T ss_pred cc-----------cCC-------------------CCC------C--C----CCCCchhhcCHhHHHHHHHHHHHHHHHH
Confidence 00 000 000 0 0 1123567899999988777666555555
Q ss_pred eeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 350 AVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 350 ~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.+...++.+.++.|.+ +.....++..+...+||++.|+++||++
T Consensus 215 ~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~ 260 (355)
T TIGR00896 215 SLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVK 260 (355)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhc
Confidence 6667788899888886 3667888999999999999999999984
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.79 E-value=8e-18 Score=165.22 Aligned_cols=130 Identities=12% Similarity=0.036 Sum_probs=110.3
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+......|.+++++|+|.++.++..+...++... +++.|++.||+|+|+++.++.++.+++.++..++ ++++
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-------~~~~ 92 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-------SSYL 92 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-------CcHH
Confidence 3455677899999999999999987777777765 8999999999999999999999999998877654 4788
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.+++.|++.|++.+.........+.+++|+ +|++++|+..++..+|..+.+++...+.
T Consensus 93 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 93 MLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 889999999999887766666778899985 6999999999999999888888766554
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.79 E-value=4.2e-18 Score=172.83 Aligned_cols=143 Identities=16% Similarity=0.006 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhh-hHH---H--HHHHHhhhhh-hhhhHhhhhccCchHHHHHHH
Q 016123 14 WLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLE-LNN---L--SVVKDIGKAF-GLLAGLASDRIPAPIILLIGS 85 (394)
Q Consensus 14 w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~-~~~---~--~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (394)
+..+..+.+..+..+. ...++...|.+.++++.+..+ .++ + .+...++..+ +++.|++.||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 4444445444444433 345566778888888654422 122 1 2333455544 789999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCchHH--------HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhH
Q 016123 86 LEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLST 156 (394)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~ 156 (394)
++++++.++.+++ ++++ .+.++|++.|+|.|..+++...++++|+| ++||++.++...+..+|.
T Consensus 95 ~l~~i~~~~~a~~-------~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 95 VIMSISTFCIGLI-------PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999988765 2443 36678999999999988889999999998 579999999988777776
Q ss_pred HHHHHHH
Q 016123 157 AIFTDLC 163 (394)
Q Consensus 157 ~i~~~i~ 163 (394)
.+.+.+.
T Consensus 168 ~lg~~~~ 174 (490)
T PRK10642 168 VLGAGVV 174 (490)
T ss_pred HHHHHHH
Confidence 6655443
No 35
>TIGR00898 2A0119 cation transport protein.
Probab=99.79 E-value=5.1e-19 Score=179.91 Aligned_cols=162 Identities=16% Similarity=0.221 Sum_probs=132.2
Q ss_pred cccchhcHHHHHHHcCCC---hhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 30 NYTFSNYSDALKTLMNLT---QLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s---~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
.|.++.+.+.+++|+|++ +.+.++..+...++..+ +++.|++.||+|||++++++.++..++.++.+++
T Consensus 105 ~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~------- 177 (505)
T TIGR00898 105 EYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------- 177 (505)
T ss_pred EecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc-------
Confidence 355556778899999999 88999988888888865 7999999999999999999999998888777654
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHH
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 184 (394)
++++.+++.|++.|++.+..+......+.+++|+ +|+.+.++...+..+|..+.+.+. .++.+ |+..+++..++.+
T Consensus 178 ~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~~~~--wr~~~~~~~i~~~ 254 (505)
T TIGR00898 178 PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA-YFIPD--WRWLQLAVSLPTF 254 (505)
T ss_pred ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH-HHhhH--HHHHHHHHHHHHH
Confidence 4688888999999999998888888999999985 699999999888888877766554 33332 7777777767777
Q ss_pred HHHhhhhcccccCCCCC
Q 016123 185 VCLGAIFFLRETTPAST 201 (394)
Q Consensus 185 v~~~~~~~~~~~p~~~~ 201 (394)
+.++..+++|++|++..
T Consensus 255 ~~~~~~~~~~esp~~l~ 271 (505)
T TIGR00898 255 LFFLLSWFVPESPRWLI 271 (505)
T ss_pred HHHHHHHhcCCChHHHH
Confidence 77777788888887754
No 36
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=2.8e-18 Score=163.99 Aligned_cols=270 Identities=14% Similarity=0.071 Sum_probs=182.5
Q ss_pred CCCCcHHHHHHHHHHHH-HhcccccchhcHHHHHHHcCCChhhhHHH-HHHHHhhhhhhhhhHhhhhccCchHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQA-ISGNNYTFSNYSDALKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~-~~g~~y~~~~~~~~l~~~~g~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
.++.+++.+..+.+... +...-+.++...+.+++++|+|+.|.+++ .+....|..+=++.|.+.||+|+|+...++.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 44556666666666543 22223566777788999999999999995 45555556678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
+..+-.+..+++.+. +++|++.+.+++.|++.+ .+...+..+++|||| ++|+|+|+.-+| .+|..+...+...
T Consensus 88 l~~IP~~~~~~a~~~----~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g~G-N~G~av~q~~~P~ 161 (417)
T COG2223 88 LLLIPCLGLAFAVTY----PSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAGAG-NLGVAVAQLVAPL 161 (417)
T ss_pred HHHHHHHHHHHHccC----CchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhccc-cccHHHHHHHHHH
Confidence 998888877776432 457888989999998755 456788899999995 699999999844 4666655444433
Q ss_pred hcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHH
Q 016123 166 LFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSG 245 (394)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
+... .+ ...|+.... +|....
T Consensus 162 v~~~------------------~g-----------------~~~w~~~~~--------i~~~~l---------------- 182 (417)
T COG2223 162 VAVA------------------FG-----------------FLAWRNVAG--------IYVVAL---------------- 182 (417)
T ss_pred HHHH------------------Hh-----------------hHHHHHHHH--------HHHHHH----------------
Confidence 3210 00 012443211 111100
Q ss_pred HHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchH
Q 016123 246 ILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTI 325 (394)
Q Consensus 246 ~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 325 (394)
++..-..... ++ +.|+ .++ ..++. .+...
T Consensus 183 ----~v~~v~~~~~---~~-d~p~-------------~r~----------------------------~~~~~--~~~~~ 211 (417)
T COG2223 183 ----AIAAVLAWLG---MN-DVPE-------------HRA----------------------------SVKPQ--LPAQL 211 (417)
T ss_pred ----HHHHHHHHHH---hC-CChh-------------hhc----------------------------ccccc--chhHH
Confidence 0000000000 11 1000 011 00000 01345
Q ss_pred HHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHh-CCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 326 FEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 326 ~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~-G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
+...|+++-|.+.+.++...|.-..+.+.++.+.++. |.+ ++.....++...+.+-|.+.|++|||+|.
T Consensus 212 ~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg 283 (417)
T COG2223 212 KAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGG 283 (417)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccc
Confidence 6778899999999999999999999999999999875 665 45689999999999999999999999974
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.78 E-value=7.3e-18 Score=164.63 Aligned_cols=129 Identities=14% Similarity=0.023 Sum_probs=109.5
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
.+....|.+++++|.|..+.+++.+...++... +++.|++.||+|+|+++.++.++..++....... ++++.
T Consensus 23 ~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 95 (385)
T TIGR00710 23 MYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-------NNIET 95 (385)
T ss_pred HhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 344556889999999999999987777777764 8999999999999999999999998888877654 36778
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++.+++.|++.+...+.....+.+++|+ +|+++.|+......+|..+.+.+...+.
T Consensus 96 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 96 LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999998888888889999985 6999999999999999888887766554
No 38
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.78 E-value=5.8e-17 Score=156.37 Aligned_cols=261 Identities=14% Similarity=0.138 Sum_probs=201.3
Q ss_pred CCCCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHH
Q 016123 9 SSAGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 9 ~~~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
..++.|..+..-.+..++.|+ -+...-..|++.+++|.|..+.++..+.+.++.. .+|+...+.||+.||++++....
T Consensus 7 ~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 7 ARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 344556666555555555554 4666677899999999999999997666666665 58999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
++.++.++.+++ ++++.+.+.|++.|+..|...........+.-| +||++|+++..+|..++..+..|+...
T Consensus 87 lFi~~n~l~alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 87 LFIVSNLLSALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 999999999886 689999999999999999988888888999997 589999999999999999999888766
Q ss_pred hcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHH
Q 016123 166 LFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSG 245 (394)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 245 (394)
+=+ ..+||..|.....+.+++.+.+.
T Consensus 160 ig~--------------------------------------~~GWR~~F~~ia~l~ll~~~~~~---------------- 185 (394)
T COG2814 160 LGQ--------------------------------------LFGWRATFLAIAVLALLALLLLW---------------- 185 (394)
T ss_pred HHH--------------------------------------HhhHHHHHHHHHHHHHHHHHHHH----------------
Confidence 532 47889887655443322211110
Q ss_pred HHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchH
Q 016123 246 ILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTI 325 (394)
Q Consensus 246 ~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 325 (394)
..+| |++ ..++ . + .+-.+.
T Consensus 186 -----~~lP----------------~~~--------~~~~----------------------------~--~--~~~~~~ 204 (394)
T COG2814 186 -----KLLP----------------PSE--------ISGS----------------------------L--P--GPLRTL 204 (394)
T ss_pred -----HhCC----------------Ccc--------CCCC----------------------------C--C--cchhHH
Confidence 0011 000 0000 0 0 001234
Q ss_pred HHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHh-CCC--cchhhHHHHHHHHHHhhhhhccccch
Q 016123 326 FEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLAL-GYV--DVSIFVSLTSIWGFFGRIISGSVSEY 391 (394)
Q Consensus 326 ~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~-G~~--~~a~~vsl~si~~~~GRl~~G~lsD~ 391 (394)
.+.+|+|..|..++..++..+...+....+.+++++. |++ +.+...-+++++..+|-++.|.++||
T Consensus 205 ~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 205 LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 6789999999999999999999889999999999986 555 36678888999999999999999999
No 39
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.77 E-value=9.5e-18 Score=169.25 Aligned_cols=187 Identities=14% Similarity=0.081 Sum_probs=127.7
Q ss_pred cHHHHHHHHHHHHHhccc-ccchhcHHHHHHHc--------CCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHH
Q 016123 13 KWLGFVTAVWVQAISGNN-YTFSNYSDALKTLM--------NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILL 82 (394)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~-y~~~~~~~~l~~~~--------g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~ 82 (394)
++..++.+.+..+..|.. ...+...+.+++++ +++..+.+++.+...++..+ +++.|++.||+|||++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 444444444444444432 23333445567766 89999999987777888765 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH---hc-cCC-chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhH
Q 016123 83 IGSLEGLVGYGAQWLVVS---RK-IQP-LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLST 156 (394)
Q Consensus 83 ~g~~~~~~g~~~~~~~~~---~~-~~~-~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~ 156 (394)
++.+++.++.+..++... .. .++ ..++.++++|++.|++.|..++....++.+|+| ++||+++|+...+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 999999888777654210 00 000 124556779999999999988888999999998 569999999999988888
Q ss_pred HHHHHHHHhhc--------CCChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 157 AIFTDLCSALF--------ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 157 ~i~~~i~~~~~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
.+.+.+...+. +...|+..+++..++.++.++..+++|+.|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~ 220 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRY 220 (479)
T ss_pred HHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 77654433222 12245555555555555555555555655543
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.77 E-value=2.4e-17 Score=166.40 Aligned_cols=289 Identities=13% Similarity=0.076 Sum_probs=186.4
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
..+...|.+.+++|.+..+.+++.+...++... .++.|++.||+|||++++++.++..++..++..+ ++++.
T Consensus 20 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~ 92 (485)
T TIGR00711 20 IVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA-------PNLEL 92 (485)
T ss_pred HHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc-------CCHHH
Confidence 445678899999999999999987777777765 7999999999999999999999999988877643 46788
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH-h
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL-G 188 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~-~ 188 (394)
+.+.|++.|++.+...+.....+.+++| ++||++.++...+..+|..+.+.+...+.+...|+..+++.....++.+ +
T Consensus 93 l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 93 MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH
Confidence 8889999999998887888889999998 5799999999999999999988888777776566665555544444333 3
Q ss_pred hhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccccccc
Q 016123 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (394)
Q Consensus 189 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (394)
..+.+|++++...+ +.++........ . ...+.. . ..
T Consensus 173 ~~~~~~~~~~~~~~----~~d~~g~~l~~~----~-----------------------~~~~~~-----~----~~---- 208 (485)
T TIGR00711 173 AFFILPRDKPAASE----NFDFLGLLLLSV----G-----------------------LGSLLY-----G----LS---- 208 (485)
T ss_pred HHHHcCCccccccC----CCcHHHHHHHHH----H-----------------------HHHHHH-----H----Hh----
Confidence 33444443322111 122211110000 0 000000 0 00
Q ss_pred ccCCCCCCchhhhcccCCCCCCCCCCccchhhhc------chhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHH
Q 016123 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVED------TVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFL 342 (394)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~ 342 (394)
+.+.+ +..++ ++ ........ -...+ .. +++ +....+.+|+++||...+..+
T Consensus 209 -~~~~~------~~~~~---~~----~~~~~~~~~~~~~~~~~~~--~~--~~~-----~~~~~~~~~~~~~~~~~~~~~ 265 (485)
T TIGR00711 209 -EGPER------GWFDS---NE----ILILSITGLVAIIAFVVWE--LT--DDN-----PLVDLRLFKYRNFTIGCVYMS 265 (485)
T ss_pred -hCCCC------CCCCc---hH----HHHHHHHHHHHHHHHHHHH--Hc--CCC-----CccCHHHHcCCChHHHHHHHH
Confidence 00000 00000 00 00000000 00000 00 111 122256889999999877777
Q ss_pred hcccceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 343 CGVGTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 343 ~~~g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
+.........+.++.+.++ .|++ ++.......++...+++++.|++.||++|
T Consensus 266 ~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~ 320 (485)
T TIGR00711 266 LLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDP 320 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 6655555555667777776 5776 35677788889999999999999999986
No 41
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.77 E-value=4e-17 Score=161.41 Aligned_cols=247 Identities=11% Similarity=0.018 Sum_probs=158.3
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
+.+++.+++|+|.++.++..+...++.. .+++.|++.||+|||+++..+.++.+++..++... ... ..+++.+++.
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~ 111 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVF--GLG-HANYPLILLF 111 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH--hcc-CccHHHHHHH
Confidence 5567778899999999997777777765 48999999999999999999999988886654321 100 1356777778
Q ss_pred HHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHH-HHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhc
Q 016123 115 LCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAI-FTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (394)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i-~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 192 (394)
+++.|+|.+.........+.+++| ++||+++|+..++.++|..+ .+.+...+.+.
T Consensus 112 ~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~----------------------- 168 (402)
T TIGR00897 112 YGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA----------------------- 168 (402)
T ss_pred HHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----------------------
Confidence 899998887665555566777776 68999999999999888644 44443333321
Q ss_pred ccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccccCC
Q 016123 193 LRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKR 272 (394)
Q Consensus 193 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~ 272 (394)
.+++..+. .. ..+..+ . ..+... +.++++ +++
T Consensus 169 ---------------~g~~~~~~-~~----~~~~~~----------------------~-~~~~~~----~~~~~~-~~~ 200 (402)
T TIGR00897 169 ---------------FGEMNTLW-SA----LAFVLT----------------------G-GVIALF----SNKDIF-TPQ 200 (402)
T ss_pred ---------------cchHHHHH-HH----HHHHHH----------------------H-HHHHHh----ccCCCC-Ccc
Confidence 12111100 00 000000 0 000000 111100 010
Q ss_pred CCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccceeeee
Q 016123 273 TEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVM 352 (394)
Q Consensus 273 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~ 352 (394)
. ..++ ++. + + .....++.+|+|.+|.+.+..++.........
T Consensus 201 ~--------~~~~-------------------~~~------~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 201 H--------MQTR-------------------EKF------S--E---LGKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred c--------ccCC-------------------cch------h--h---HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000 0 0 01234678899999998887776655555566
Q ss_pred eChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 353 NNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 353 ~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
+..+.+.++.|++. .....++..+++.+|++..|+++||++|
T Consensus 243 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~ 286 (402)
T TIGR00897 243 VFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGW 286 (402)
T ss_pred HHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 78888888888863 4566778889999999999999999875
No 42
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.76 E-value=1e-16 Score=159.04 Aligned_cols=273 Identities=16% Similarity=0.138 Sum_probs=191.2
Q ss_pred HHHHHcC--CChhhhHH----HHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 39 ALKTLMN--LTQLELNN----LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 39 ~l~~~~g--~s~~~~~~----~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
.+.+++| .+..+..+ +.++..+|.++ ++..|++.||+|||..+.++.++..++..++.++... +++.++
T Consensus 44 t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~----~~~e~l 119 (485)
T KOG0569|consen 44 TLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA----PSFEML 119 (485)
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh----hhHHHH
Confidence 3456677 55544443 34555667765 7899999999999999999999888888777765332 457778
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHh-hcCC-ChhHHHHHHHHHHHHHHHh
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA-LFAD-DPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~-~~~~-~~~~~~~~~~~~~~~v~~~ 188 (394)
.+.|++.|+..|.........+.|.-|+ .||....+...+..+|..+...+... ++++ +.|.+++....+++++.++
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 8899999999999888888899999996 59999999999999988887554443 5543 6799999999999999999
Q ss_pred hhhcccccCCCCCc-cccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccc
Q 016123 189 AIFFLRETTPASTV-DEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (394)
Q Consensus 189 ~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (394)
..+++||+|++... ..+.+++.+..- .++..
T Consensus 200 ~l~~~PESPk~Ll~~k~~~~~A~~sl~-----------------------------------------------~y~G~- 231 (485)
T KOG0569|consen 200 LLPFLPESPKYLLIKKGDEEEARKALK-----------------------------------------------FYRGK- 231 (485)
T ss_pred HHhcCCCCcchHHHHcCCHHHHHHHHH-----------------------------------------------HHhCC-
Confidence 99999999998754 222233322100 02210
Q ss_pred cccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhch----hHHHHHHHHHh
Q 016123 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTV----DFWILFVSFLC 343 (394)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~----~Fwll~~~~~~ 343 (394)
..++.+.|++ .+| .+. ++ ....++.+++|+++++ ..++.....++
T Consensus 232 ---~~~~~~~e~~------------------~~e--~~~-------~~-~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~ 280 (485)
T KOG0569|consen 232 ---EDVEAEIEEM------------------LRE--IEE-------EE-LEKKKQISLRQLLKNPTLRRPLLIGIVVSFA 280 (485)
T ss_pred ---CcchhHHHHH------------------HHH--HHH-------hc-cccccCCcHHHHhcCcchhHHHHHHHHHHHH
Confidence 0000000000 000 000 00 1112467889998875 34555555556
Q ss_pred cccceee-eeeChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 344 GVGTGLA-VMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 344 ~~g~g~~-~~~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
....|.. +......|.++.|.++ +.......++.|.+..+++.++.||+||
T Consensus 281 qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gR 334 (485)
T KOG0569|consen 281 QQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGR 334 (485)
T ss_pred HHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 6666665 6667788899999973 5677778999999999999999999998
No 43
>PRK10504 putative transporter; Provisional
Probab=99.76 E-value=1.4e-16 Score=160.55 Aligned_cols=145 Identities=12% Similarity=0.041 Sum_probs=118.0
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.+.+....|.+.+++|+|..+.+++.+...++.. ..++.|++.||+|+|++++.+.++.+++.+...+. ++.
T Consensus 26 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 98 (471)
T PRK10504 26 TTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS-------GTL 98 (471)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-------CCH
Confidence 3455667888999999999999997777667765 48999999999999999999988888888765543 367
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV 181 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~ 181 (394)
+.+++.+++.|++.+...+.....+.+++|+ +|+.+.|+......+|..+.+++...+.+...|+..+.+...
T Consensus 99 ~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~ 172 (471)
T PRK10504 99 NELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIP 172 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHH
Confidence 7788889999999988777777888999985 699999999999899999888888777766566665555443
No 44
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.76 E-value=4.8e-17 Score=161.38 Aligned_cols=276 Identities=11% Similarity=0.035 Sum_probs=180.0
Q ss_pred Hhcccccc-hhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016123 26 ISGNNYTF-SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (394)
Q Consensus 26 ~~g~~y~~-~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (394)
..|..+.. +...|.+++++|+|..+.+++.+...++... +++.|++.||+|+|+++.+|.++++++.+++..+...
T Consensus 14 ~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~-- 91 (410)
T TIGR00885 14 LWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI-- 91 (410)
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 33443333 5778999999999999999988877778765 8999999999999999999999999998876543211
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhH-HHHHHHHH
Q 016123 104 QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAK-FLFMLAIV 181 (394)
Q Consensus 104 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~-~~~~~~~~ 181 (394)
++++.+.+.+++.|+|.|...++....+.++.|+ +|++.+++.++.+++|..+.+.+...++...... ....
T Consensus 92 --~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~---- 165 (410)
T TIGR00885 92 --MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDV---- 165 (410)
T ss_pred --ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhh----
Confidence 3678888889999999999888778888888884 6999999999999999999888877665321000 0000
Q ss_pred HHHHHHhhhhcccccCCCC-CccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccc
Q 016123 182 PFVVCLGAIFFLRETTPAS-TVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVY 260 (394)
Q Consensus 182 ~~~v~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~ 260 (394)
..+..|... ...+.+..+||..+...+.+.+.. .++..
T Consensus 166 ----------~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~------------------------~~~~~------- 204 (410)
T TIGR00885 166 ----------LDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAV------------------------ALLIM------- 204 (410)
T ss_pred ----------hhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHH-------
Confidence 000000000 000112346776654333211100 00000
Q ss_pred ccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHH
Q 016123 261 SFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVS 340 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~ 340 (394)
++ + .|+.+ + .++ + +. + ...+.++.+|+|.+|+..+.
T Consensus 205 --~~-~---~p~~~----~---~~~-------------------~--------~~-~---~~~~~~~~~~~~~~~~~~l~ 240 (410)
T TIGR00885 205 --LT-K---MPALN----H---SDA-------------------K--------QI-S---FSASLSRLARIRHYREGVIA 240 (410)
T ss_pred --Hh-c---CCCCC----c---ccc-------------------c--------cc-c---chhhHHHHHhChhHHHHHHH
Confidence 11 0 11000 0 000 0 00 0 01134578899999998888
Q ss_pred HHhcccceeeeeeChHHHHHHhCCC--c--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 341 FLCGVGTGLAVMNNMGQIGLALGYV--D--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 341 ~~~~~g~g~~~~~n~~~i~~~~G~~--~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.++..+...+..++++++.++.+.. + ++...+.+-....+||+++|++.||+++
T Consensus 241 ~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~ 298 (410)
T TIGR00885 241 QFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAA 298 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 8887777767778888888876532 2 3446666667789999999999999864
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.75 E-value=1.4e-16 Score=161.62 Aligned_cols=178 Identities=20% Similarity=0.212 Sum_probs=137.4
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+++|..+....+..+..+. .+..+...|.+++++|+|..+.+++.+...++... +++.|++.||+|+|++++++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 3456655555555444433 34556677889999999999999977666777654 899999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++.+.+.+. ++++.+++.+++.|++.+..+......+.+++| ++|+++.++...+..+|..+.+.+...+.
T Consensus 96 ~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 96 SVGTLACGFA-------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9888877654 367888889999999988877778888999998 46999999999999999999998888877
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccc
Q 016123 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRE 195 (394)
Q Consensus 168 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 195 (394)
+...|+..+++++++.++.+......|+
T Consensus 169 ~~~~w~~~f~~~~~~~~~~~~~~~~~p~ 196 (496)
T PRK03893 169 PVWGWRALFFIGILPIIFALWLRKNLPE 196 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7666777766666555544433333333
No 46
>PRK10133 L-fucose transporter; Provisional
Probab=99.75 E-value=1.5e-16 Score=159.19 Aligned_cols=132 Identities=11% Similarity=0.051 Sum_probs=109.2
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
...+.+.|.+++++|+|..+.++..+...++... +++.|++.||+|+|+++.++.+++.++.+++..... .++++
T Consensus 43 ~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~----a~~~~ 118 (438)
T PRK10133 43 NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE----IMNYT 118 (438)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh----cCCHH
Confidence 4556788999999999999999987777777764 899999999999999999999999999877542211 14688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccC-CCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
.+++.|++.|+|.+...++....+.++.|++ |+..+++.++.+++|..+.+.+...+
T Consensus 119 ~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 119 LFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999998888888888887765 55689999999999988887765543
No 47
>PRK11043 putative transporter; Provisional
Probab=99.75 E-value=7.8e-17 Score=159.00 Aligned_cols=148 Identities=18% Similarity=0.007 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHH
Q 016123 14 WLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGY 92 (394)
Q Consensus 14 w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~ 92 (394)
|..+..+++.+........+....|++++++|+|.++.+++.+...++... +++.|++.||+|+|+++..+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 85 (401)
T PRK11043 6 GFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGS 85 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHH
Confidence 344444444333222223333445667899999999999987777777764 8999999999999999999999888887
Q ss_pred HHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 93 GAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
.+..+. ++++.+++.+++.|++.+.........+.+++|+ +|+.+.+......++|+.+.+.+...+.+
T Consensus 86 ~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 86 LGMLWV-------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHHHh-------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776543 3678888889999988876666666778899985 58888888887788888888777665543
No 48
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.74 E-value=6.4e-17 Score=159.97 Aligned_cols=153 Identities=16% Similarity=0.049 Sum_probs=113.5
Q ss_pred cCCCCcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHH
Q 016123 8 TSSAGKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGS 85 (394)
Q Consensus 8 ~~~~~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~ 85 (394)
+.+++.|...+...+..+... ....+....|++++++|+|+.+.++..+...++... +++.|++.||+|+|+++.++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 85 (406)
T PRK15402 6 RLGRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGV 85 (406)
T ss_pred HhhHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH
Confidence 334445555554444443322 223344456778999999999999976677777654 799999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 86 LEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
++.+++....... ++++.+++.+++.|++.+.........+.++||+ +|+.+.++......+|..+.+.+..
T Consensus 86 ~~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 158 (406)
T PRK15402 86 AFFILTCLAILLA-------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGA 158 (406)
T ss_pred HHHHHHHHHHHHH-------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888776553 3677788889999998887666777888899985 5888899888777777777776655
Q ss_pred hhc
Q 016123 165 ALF 167 (394)
Q Consensus 165 ~~~ 167 (394)
.+.
T Consensus 159 ~l~ 161 (406)
T PRK15402 159 ALI 161 (406)
T ss_pred HHH
Confidence 544
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.74 E-value=1.4e-16 Score=156.70 Aligned_cols=128 Identities=15% Similarity=0.056 Sum_probs=106.2
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
.+....|.+++++|.|..+.++..+...++... .++.|++.||+|+|+.++++.++..++..+.... ++.+.
T Consensus 21 ~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~-------~~~~~ 93 (392)
T PRK10473 21 MYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA-------ETSSL 93 (392)
T ss_pred HHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-------CcHHH
Confidence 444678899999999999999977777777764 8999999999999999999999999888876653 35777
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
+++.+++.|++.+..+......+.+++| ++|+++.|+......+|..+.+.+...+
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999988877778888999998 5799999999988888877776665444
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.74 E-value=5.7e-17 Score=156.58 Aligned_cols=132 Identities=11% Similarity=0.030 Sum_probs=107.5
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
...|.+.++++.+..+.+++.+...++.. .+++.|++.||+|||++++.+.++..++..+..+.... .+.+++.+++
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 97 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALL--GGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHc--CCCcHHHHHH
Confidence 44566777899999999998777777775 48999999999999999999999888877766654211 1126788888
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
.+++.|++.+...++....+.+++| ++|+++.|+...+..+|..+.+.+...+.+
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 153 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA 153 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999887788889999998 479999999999999999888877666543
No 51
>PRK15075 citrate-proton symporter; Provisional
Probab=99.73 E-value=1.7e-16 Score=158.58 Aligned_cols=145 Identities=13% Similarity=-0.011 Sum_probs=106.1
Q ss_pred CcHHHHHHHHHHHHHhcc-cccchhcHHHHHHHcCCChhhhHH-HHHHHHhhh------hhhhhhHhhhhccCchHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGN-NYTFSNYSDALKTLMNLTQLELNN-LSVVKDIGK------AFGLLAGLASDRIPAPIILLI 83 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~-~y~~~~~~~~l~~~~g~s~~~~~~-~~~~~~~~~------~~~~~~G~l~Dr~G~r~~~~~ 83 (394)
.||+.....++..+.... ...++...|.++++++.+..+.+. ..+....+. +.+++.|++.||+|||++++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 455554444444444433 456788899999999998887654 322222221 236789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchHH--------HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhh
Q 016123 84 GSLEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGL 154 (394)
Q Consensus 84 g~~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~gl 154 (394)
+.+++.++..++.++ ++++ .+++.|++.|++.+.........+.+|+| ++||+++++...+..+
T Consensus 92 ~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~ 164 (434)
T PRK15075 92 TLSIMASGTLLIAFV-------PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV 164 (434)
T ss_pred HHHHHHHHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH
Confidence 999999998887654 2343 35678999999998877777788999998 5799999999888777
Q ss_pred hHHHHHHHH
Q 016123 155 STAIFTDLC 163 (394)
Q Consensus 155 g~~i~~~i~ 163 (394)
|..+.+.+.
T Consensus 165 g~~~g~~~g 173 (434)
T PRK15075 165 AVVFAALLG 173 (434)
T ss_pred HHHHHHHHH
Confidence 766655443
No 52
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.73 E-value=2.2e-16 Score=154.96 Aligned_cols=130 Identities=18% Similarity=0.139 Sum_probs=107.8
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.....+.|++.+++|+|..+++++.+...++..+ +++.|++.||+|+|+++..+.++.+++.....+. ++++
T Consensus 23 ~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~~ 95 (381)
T PRK03633 23 AVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLM-------VGFW 95 (381)
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccHH
Confidence 3455678999999999999999988877888765 8999999999999999999999999988876654 4688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.+.+.|++.|++.+...+.....+.++.| ++||+++|+...+..+|..+.+.+...+.
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 96 SWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 88889999999988766555555666665 68999999999999999988887766554
No 53
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.73 E-value=4.5e-17 Score=156.67 Aligned_cols=129 Identities=22% Similarity=0.230 Sum_probs=107.8
Q ss_pred chhcHH-HHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 33 FSNYSD-ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 33 ~~~~~~-~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
+....| .+.+++|+|..+++++.+...++.. .+++.|++.||+|+|+++.++.++.+++.....++ ++.+.
T Consensus 15 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~~~~ 87 (352)
T PF07690_consen 15 ISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------SNFWL 87 (352)
T ss_dssp HHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-------CCHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-------hhHHH
Confidence 445556 7889999999999998777777765 58999999999999999999999999985554433 25667
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+++.+++.|++.+...+.....+.+++|+ +|+++.|+...+.++|..+.+.+...+.+
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 146 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS 146 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh
Confidence 77899999999988888888999999996 89999999999999999888887776653
No 54
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.72 E-value=4.1e-16 Score=153.68 Aligned_cols=130 Identities=12% Similarity=-0.025 Sum_probs=100.8
Q ss_pred HHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHH
Q 016123 39 ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVS-RKIQPLSYWQMCVFLC 116 (394)
Q Consensus 39 ~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~ 116 (394)
.+++++|+|..+.+++.+...++.. .+++.|++.||+|||+++.++.++.+++......... +.....+++.+++.|+
T Consensus 41 ~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (399)
T PRK05122 41 YVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRL 120 (399)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHH
Confidence 4688999999999998777777775 4899999999999999999999988877665544311 1000013556778899
Q ss_pred HHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+.|++.+...........+++| ++|++++++...+..+|..+.+++...+.+
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~ 173 (399)
T PRK05122 121 LLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH 173 (399)
T ss_pred HHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999877777777888887 679999999888888887777777655543
No 55
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.72 E-value=6.8e-17 Score=161.41 Aligned_cols=253 Identities=11% Similarity=0.050 Sum_probs=181.5
Q ss_pred HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
+.+++||+.|-+++.+....|.+. .+++|+++||+|.|+++..+.++.+++.++.-++.. .+++.+++.|+++|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-----~~~~~~~~~R~lqG 139 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-----IGFYLLLVLRFLQG 139 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-----hcchhhHHHHHHhH
Confidence 457999999999988888889876 789999999999999999999999999988776643 24556677899999
Q ss_pred hhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 120 NSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
++.|..+++.....++|+| ++|++..++..++..+|..+.-|+...+.+.
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----------------------------- 190 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----------------------------- 190 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-----------------------------
Confidence 9999999888889999998 5899999999999999999998888877764
Q ss_pred CCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccccCCCCCCch
Q 016123 199 ASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVE 278 (394)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~ 278 (394)
..||+..|-..+.+.++.+++= .. . .+ ++|++ +
T Consensus 191 --------~~GW~sifY~~g~~g~i~~~~w------------------------~~---~----~~-d~P~~---h---- 223 (466)
T KOG2532|consen 191 --------SLGWPSIFYVFGIVGLIWFILW------------------------FL---F----YS-DSPSK---H---- 223 (466)
T ss_pred --------CCCCchHHHHHHHHHHHHHHHH------------------------HH---H----hc-CCccc---C----
Confidence 2445544322222111111000 00 0 11 11111 0
Q ss_pred hhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccceeeeeeChHHH
Q 016123 279 EQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQI 358 (394)
Q Consensus 279 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i 358 (394)
|..+++|-+ . .+.+ .. ++.....++..++++++++.+|.++++.++..-....++..++.+
T Consensus 224 ------~~is~~El~-----~----I~~~--k~--~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY 284 (466)
T KOG2532|consen 224 ------PNISEKELK-----Y----IEKG--KS--EAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTY 284 (466)
T ss_pred ------CCCCHHHHH-----H----HHhc--cc--ccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 000000000 0 0000 00 000011135789999999999999999999988888888999999
Q ss_pred HHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 359 GLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 359 ~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.++ ++++ +.+.+.++=-+...+-++++|.++||+.
T Consensus 285 ~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~ 322 (466)
T KOG2532|consen 285 LKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLT 322 (466)
T ss_pred HHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 987 4665 5778888999999999999999999974
No 56
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.72 E-value=1.5e-16 Score=155.29 Aligned_cols=129 Identities=11% Similarity=0.031 Sum_probs=108.1
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
.+....|.+.+++|+|..+.+++.+...++... .++.|++.||+|||+++..+.++.+++...+... ++++.
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ 81 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-------QTIDQ 81 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 444567888999999999999987777777754 8999999999999999999999999888887654 35777
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++.+++.|++.+.........+.+++|+ +|++++++...+..+|..+.+.+...+.
T Consensus 82 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 82 LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78889999998887777777889999985 6999999999999998888877765554
No 57
>PRK09952 shikimate transporter; Provisional
Probab=99.72 E-value=2.9e-16 Score=157.12 Aligned_cols=147 Identities=10% Similarity=0.047 Sum_probs=105.5
Q ss_pred CCcHHHHHHHHHHHHHhcc-cccchhcHHH-HHHHc--CCChhhhHHHHH-----HHHhhhhh-hhhhHhhhhccCchHH
Q 016123 11 AGKWLGFVTAVWVQAISGN-NYTFSNYSDA-LKTLM--NLTQLELNNLSV-----VKDIGKAF-GLLAGLASDRIPAPII 80 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~-~y~~~~~~~~-l~~~~--g~s~~~~~~~~~-----~~~~~~~~-~~~~G~l~Dr~G~r~~ 80 (394)
.++|..+..+++...+.+. ...++...+. +.+++ +.++. .+++.+ ...++..+ +++.|++.||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~ 96 (438)
T PRK09952 18 SRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHH
Confidence 3556666666555544433 3445555554 45555 67766 344322 22233333 6788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCchHH--------HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhh
Q 016123 81 LLIGSLEGLVGYGAQWLVVSRKIQPLSYW--------QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGY 151 (394)
Q Consensus 81 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~ 151 (394)
+.++.++++++.++.+++ ++++ .+.+.|++.|++.|..++.....+.||+| |+||+..+....+
T Consensus 97 l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 97 LMLTVWMMGIATALIGLL-------PSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred HHHHHHHHHHHHHHHhcC-------CcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 999999999998887764 2333 46678999999999888888889999998 5799999999999
Q ss_pred hhhhHHHHHHHHHh
Q 016123 152 VGLSTAIFTDLCSA 165 (394)
Q Consensus 152 ~glg~~i~~~i~~~ 165 (394)
..+|..+...+...
T Consensus 170 ~~~G~~l~~~~~~~ 183 (438)
T PRK09952 170 YGVGLLLSTGLVSL 183 (438)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988777665543
No 58
>PRK12382 putative transporter; Provisional
Probab=99.71 E-value=9.5e-16 Score=150.81 Aligned_cols=129 Identities=15% Similarity=-0.023 Sum_probs=98.9
Q ss_pred HHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHHHHHHH
Q 016123 39 ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVS-RKIQPLSYWQMCVFLC 116 (394)
Q Consensus 39 ~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~~ 116 (394)
.+++++|+|..+++++.+...++.. .+++.|++.||+|||++++.+.+...++...+..... ......+++.+++.|+
T Consensus 41 ~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 41 FVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 4688999999999997777777775 4899999999999999999998877665443322110 0000135677888999
Q ss_pred HHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+.|++.+...++....+.+++| |+|++++|+...+...|..+.+++...+.
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998777777778889997 57999999998888888888777765543
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.67 E-value=3.2e-15 Score=147.18 Aligned_cols=129 Identities=12% Similarity=0.040 Sum_probs=103.8
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
.+....|++.+++|+|..+.+++.+...++..+ .++.|++.||+|||+++.++.++..++.+..... ++++.
T Consensus 26 ~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------~~~~~ 98 (394)
T PRK11652 26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-------HSLTV 98 (394)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------ccHHH
Confidence 344456888999999999999987777777764 8999999999999999999999888888776543 36778
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+++.+++.|++.+...........++++ ++|+.+.++...+..++..+.+.+...+.
T Consensus 99 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 156 (394)
T PRK11652 99 LIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT 156 (394)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999887765556666778887 57999999988888888777776665543
No 60
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.65 E-value=2.9e-16 Score=163.54 Aligned_cols=134 Identities=15% Similarity=0.056 Sum_probs=108.9
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHH--h---------
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVS--R--------- 101 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~--~--------- 101 (394)
+...++++++|+++.++.+++.+...++..+ .++.|++.||+|||+.+.+|.+++++|.+++++..- +
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4556889999999999999988888888865 899999999999999999999999999998876420 0
Q ss_pred ---c-----------c-----------------C--CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHH
Q 016123 102 ---K-----------I-----------------Q--PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGI 147 (394)
Q Consensus 102 ---~-----------~-----------------~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl 147 (394)
. . . +..+..+++.|++.|+|.+..++....++.+|+| ++|++++|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 0 0 0 0023455678999999999988888999999998 579999999
Q ss_pred HHhhhhhhHHHHHHHHHhhc
Q 016123 148 LKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 148 ~~~~~glg~~i~~~i~~~~~ 167 (394)
..++..+|..+...+...+.
T Consensus 213 ~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHH
Confidence 99999898887776665544
No 61
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.65 E-value=5.3e-15 Score=143.51 Aligned_cols=129 Identities=11% Similarity=-0.088 Sum_probs=94.8
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhcc-----CchHHH-HHHHHHHHHHHHHHHHHHHhccCCch
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPLS 107 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (394)
+...|.+.+++|+|.+|+++.+.... .....++.|++.||+ ||||.+ +.+.++.++.....++... ..+
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~----~~~ 82 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLVGL-PYSLKFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP----STD 82 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHHHH-HHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc----chh
Confidence 34567788999999999999765432 223489999999998 899974 5666666666555543211 134
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.+.++...++.+.+.+...++....+.+++| |+|+++.|+..++..+|..+.+.+...+.
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5556666666676767666777788999997 57999999999999999888887765554
No 62
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.64 E-value=4e-15 Score=145.01 Aligned_cols=133 Identities=12% Similarity=-0.053 Sum_probs=93.1
Q ss_pred ccchhcHHHHHHHcC--CChhhhHHHHHHHH-----hhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhc
Q 016123 31 YTFSNYSDALKTLMN--LTQLELNNLSVVKD-----IGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK 102 (394)
Q Consensus 31 y~~~~~~~~l~~~~g--~s~~~~~~~~~~~~-----~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~ 102 (394)
+.++...+.+.+++. .++.+.+...+... ++.. .+++.|++.||+|||+++.++.++..++..+..+... .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~-~ 88 (394)
T TIGR00883 10 YLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPS-Y 88 (394)
T ss_pred HHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCC-h
Confidence 445556666666654 44555555332221 1212 3689999999999999999999999998887765411 0
Q ss_pred cCC--chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 103 IQP--LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 103 ~~~--~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
... ...+.+++.|++.|++.+.........+.+++| ++||++.++...+..+|..+.+.+..
T Consensus 89 ~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 89 ATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 001245668999999988877778889999997 57999999999998888887776543
No 63
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.64 E-value=1.1e-14 Score=141.78 Aligned_cols=123 Identities=15% Similarity=0.042 Sum_probs=86.3
Q ss_pred HHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHH-HHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Q 016123 39 ALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLI-GSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (394)
Q Consensus 39 ~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~-g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (394)
.+++++|+|..+.+++.+...+... .+++.|++.||+|+||.+++ +.+...++..+.+.+ ++++.+++.++
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~ 95 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN-------RNYFLLLVLGV 95 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc-------chHHHHHHHHH
Confidence 4688999999999997666666554 58999999999999987665 444445555555432 46777777777
Q ss_pred HHhhhhhhhhhhHHHHHHHhccc-CCCch--HHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFRR-NRGPV--SGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a--~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+.|.+.+...+.......++.|+ +|+.+ .++...+.++|..+.+++...+.+
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~ 150 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL 150 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH
Confidence 77655555444445556677764 45544 577777788888888877666543
No 64
>PRK10054 putative transporter; Provisional
Probab=99.64 E-value=6.2e-15 Score=145.56 Aligned_cols=127 Identities=13% Similarity=0.059 Sum_probs=97.3
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
+.+.+.+++++|+|..+++++.+...+... .+++.|++.||+|+|++++++.+...++++.+.+. ++++.++
T Consensus 28 ~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 100 (395)
T PRK10054 28 PFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-------NNVTLVV 100 (395)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-------hHHHHHH
Confidence 344556788999999999997666666554 58999999999999999999999888888776653 3566666
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+.+++.|.+.+...........+.+| ++|+++.|+......+|.++.+++...+.
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 101 LFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666555444445556667776 46999999999999999888887766543
No 65
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.63 E-value=1.8e-14 Score=143.09 Aligned_cols=130 Identities=19% Similarity=0.091 Sum_probs=104.6
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
..+..-.|.+.+++|.+..+.++..+...++.. .+++.|++.||+|||++++.+.++.+++......+ ++++
T Consensus 33 ~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~~ 105 (413)
T PRK15403 33 DLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------TSMT 105 (413)
T ss_pred HhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------CCHH
Confidence 344445577899999999999996666666665 48999999999999999999999988888777653 4688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.+++.|++.|++.+.........+.++||+ +|++++++...+..+|..+.+.+...+.
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999998876555566778899985 6899999999999999888766654443
No 66
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.63 E-value=8.1e-15 Score=145.50 Aligned_cols=133 Identities=17% Similarity=0.056 Sum_probs=104.2
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
....|.+.++++.+..+.+++.+...++... +++.|++.||+|+|+++.++.++.++++......... ..++++.++
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ 114 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL--PEPSLLAIY 114 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc--CCCcHHHHH
Confidence 4456777788888999999987777777764 8999999999999999999888888777665432110 113577777
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+.+++.|++.+....+....+.+++|+ +|+++.++...+.++|..+.+.+...+.+
T Consensus 115 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~ 171 (417)
T PRK10489 115 LLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA 171 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 788898988887666777788899985 69999999998889998888877766543
No 67
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.62 E-value=2.8e-14 Score=141.13 Aligned_cols=147 Identities=17% Similarity=0.200 Sum_probs=115.2
Q ss_pred CcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV 90 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~ 90 (394)
.+|..+...++..... ...+++..+.+++++|+|..+++++.....+... .+++.|++.||+|+|+++.++.++..+
T Consensus 11 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~ 88 (400)
T PRK11646 11 GKYFLLIDNMLVVLGF--FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAA 88 (400)
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHH
Confidence 3455555555544332 2345556666889999999999997666566654 589999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 91 GYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 91 g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+.+.+... +++|.+++.+++.|++.+...++..+.+.+++| ++||++.|+......+|..+.+.+...+.
T Consensus 89 ~~~~~~~~-------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 89 GFATMAIA-------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877653 367888888999999887766666778889997 57999999999999999988888776654
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.61 E-value=5.1e-14 Score=138.88 Aligned_cols=129 Identities=13% Similarity=-0.010 Sum_probs=98.3
Q ss_pred cchhcHHHHHHHcCCChhhh-----HHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 32 TFSNYSDALKTLMNLTQLEL-----NNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~-----~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
.+..+.|.+.+++|++..+. +++.+...++.. .+++.|++.||+|+|+++..+.++.+++..++...
T Consensus 32 ~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------- 104 (408)
T PRK09874 32 LVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLA------- 104 (408)
T ss_pred HhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHH-------
Confidence 44567788888999987653 555555555554 48999999999999999999999888887776543
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
++++.+++.+++.|++.+. +......+.+++| ++||++.|+...+..+|..+.+.+...+.+
T Consensus 105 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 105 QNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred hhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677888888888887654 3445566778887 579999999999888888888777665543
No 69
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.8e-14 Score=144.62 Aligned_cols=248 Identities=17% Similarity=0.143 Sum_probs=179.7
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
++++.+....+.+.+.+.+.++.++ .+++|.+.||++..+.+....+..++-.++.... ++++.+++.|++.
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------~s~~~~ialr~ll 144 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------HSFPGLIALRFLL 144 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------hhhHHHHHHHHHH
Confidence 4578888899999988888888865 7999999999998888877777666544333332 4788999999999
Q ss_pred hhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC------ChhH-HHHHHHHHHHHHHHhhh
Q 016123 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD------DPAK-FLFMLAIVPFVVCLGAI 190 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~------~~~~-~~~~~~~~~~~v~~~~~ 190 (394)
|+..+..+++...++.+||.+ +||+.+|+..+..++|+.+.+.+...+++. ..|+ .++.-+++..+.++++.
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 999999988888999999985 799999999999999999999998886531 1222 23333333444444444
Q ss_pred hcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccccccccc
Q 016123 191 FFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNR 270 (394)
Q Consensus 191 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~ 270 (394)
+++|+.|++.
T Consensus 225 ~~lp~~P~~~---------------------------------------------------------------------- 234 (495)
T KOG2533|consen 225 FFLPDNPSKA---------------------------------------------------------------------- 234 (495)
T ss_pred EEecCChhhc----------------------------------------------------------------------
Confidence 4444444321
Q ss_pred CCCCCCch-----hhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcc
Q 016123 271 KRTEPDVE-----EQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGV 345 (394)
Q Consensus 271 ~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~ 345 (394)
.-..|.| ++.+.++ + +. . ++ ..+...++|++|+|..|.+.++.+|..
T Consensus 235 -~fl~~~ek~~~~~~~~~~~---~---------------~~---~---~~---~~~~~~~~~a~~dp~vw~~~l~~~~~~ 286 (495)
T KOG2533|consen 235 -WFLTDEEKELVVERLRESP---S---------------GG---I---EN---KFKWKGFKEALKDPGVWPFSLCYFFLK 286 (495)
T ss_pred -cccchHHHHHHHHHHHhcc---C---------------CC---c---cc---ccCHHHHHHHHhchhHHHHHHHHHHHh
Confidence 0000000 0000000 0 00 0 00 012467899999999999999999999
Q ss_pred cceeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchh
Q 016123 346 GTGLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (394)
Q Consensus 346 g~g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (394)
.....+.+.++.+.++ .|++ ++..+...+.+.+.+|-++.|+++||+
T Consensus 287 lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 287 LVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred hccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 9999999999999999 3466 467788889999999999999999994
No 70
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.60 E-value=5.8e-14 Score=143.35 Aligned_cols=261 Identities=17% Similarity=0.110 Sum_probs=183.0
Q ss_pred hhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhh
Q 016123 49 LELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNT 127 (394)
Q Consensus 49 ~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~ 127 (394)
.+.+++.+...++... +++.|++.|++|||++++++.+++.+|.++.+++ .++++++++|++.|+|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------~~~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------PSWYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhccchhhhhh
Confidence 3457888888888865 8999999999999999999999999999999876 4788999999999999999888
Q ss_pred hHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCC--hhHHHHHHHHHHHHHHHhhhhcccccCCCCCccc
Q 016123 128 AVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADD--PAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDE 204 (394)
Q Consensus 128 ~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~ 204 (394)
....++++.-|+ .||...++.+....+|..+. .+.....+.. .||.++.++.+++++..++.+++|+.|++....+
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g 240 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG 240 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC
Confidence 888889999996 69999999999988665554 5556655543 7999999999999999999999999999876422
Q ss_pred cccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccccCCCCCCchhhhccc
Q 016123 205 EKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVE 284 (394)
Q Consensus 205 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (394)
+.++..+... .++..+ . .+.+.|-++...
T Consensus 241 ~~~~a~~~l~-----------------------------------------------~l~g~~---~-~~~~~~~~~~~~ 269 (513)
T KOG0254|consen 241 RLEEAKRSLK-----------------------------------------------RLRGLS---P-EDVEVELELLKI 269 (513)
T ss_pred ChHHHHHHHH-----------------------------------------------HHhCCC---C-cchHHHHHHHHH
Confidence 2222211100 011100 0 000000000000
Q ss_pred CCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHH----HhhchhHHHHHHHHHhcccceeeeeeChHHHHH
Q 016123 285 PLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFE----AMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL 360 (394)
Q Consensus 285 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~----~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~ 360 (394)
.. . .+.. . . ..+..+++ ..+++.++-+.+..+-.......+++..+++.+
T Consensus 270 ~~------------~----~~~~------~--~--~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 270 KL------------L----VEAE------V--A--EGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HH------------H----Hhhh------c--c--cccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 00 0 0000 0 0 00111222 334456666666666555445678999999999
Q ss_pred HhCCCcc-hhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 361 ALGYVDV-SIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 361 ~~G~~~~-a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
+.|..+. .....+.++.|.++-++..++.||+||
T Consensus 324 ~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gR 358 (513)
T KOG0254|consen 324 SAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGR 358 (513)
T ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998754 667777889999999999999999998
No 71
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.59 E-value=4.9e-14 Score=138.57 Aligned_cols=163 Identities=15% Similarity=0.029 Sum_probs=138.0
Q ss_pred ccccchhcHHHHHHHcCCChhh-hHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 29 NNYTFSNYSDALKTLMNLTQLE-LNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 29 ~~y~~~~~~~~l~~~~g~s~~~-~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
..-..++..|++.+++|+|.+| .+.+......+... .+++|++.||+|+|+++.++.+..++..++..++ +
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa-------~ 113 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG-------T 113 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-------H
Confidence 4456778889999999999999 88877777777764 8999999999999999999999999998888765 3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh--HHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA--KFLFMLAIVPF 183 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~--~~~~~~~~~~~ 183 (394)
+++.+.+.|++.|++.|..+ +...++.+|||+ +|++++|+..++..+|.++.+++...+..-++. ..+..+.....
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 68888899999999999988 899999999995 799999999999999999999999884433332 34566677778
Q ss_pred HHHHhhhhcccccCCC
Q 016123 184 VVCLGAIFFLRETTPA 199 (394)
Q Consensus 184 ~v~~~~~~~~~~~p~~ 199 (394)
.++++..+++|.++++
T Consensus 193 ~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 193 TFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHhCCCCchh
Confidence 8888889999966653
No 72
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.59 E-value=8.5e-14 Score=137.34 Aligned_cols=124 Identities=14% Similarity=0.039 Sum_probs=101.2
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
...+++.+++|.+..+.+++.+...+... ++|+.|++.||+|||++++++.++.+++.+.+.+. .+. .+
T Consensus 24 ~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~-------~~~---~~ 93 (393)
T PRK11195 24 FAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG-------IHP---LL 93 (393)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH-------HHH---HH
Confidence 34456678999999999998777777775 58999999999999999999999998877765442 122 45
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
.|++.|++.+..+++....+.+++| ++|+++.|+......+|..+.+.+...+.+
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999988888999999998 579999999998888888888777666543
No 73
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.59 E-value=7.6e-14 Score=133.57 Aligned_cols=132 Identities=23% Similarity=0.183 Sum_probs=113.6
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.+.++.+.|.+.+++|.+..+.+++.+...++... .++.|++.||+|||+.+.++.++..++....... +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~ 87 (352)
T cd06174 15 RGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SSL 87 (352)
T ss_pred hhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------ccH
Confidence 34566777888899999999999987777777754 8999999999999999999999999998887654 367
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+.+++.+++.|++.+...........+++|+ +|+++.++......+|..+.+.+...+.+
T Consensus 88 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (352)
T cd06174 88 WLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE 148 (352)
T ss_pred HHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888899999999998888888899999996 79999999999999999998888776654
No 74
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.58 E-value=9.4e-14 Score=141.01 Aligned_cols=131 Identities=17% Similarity=0.017 Sum_probs=98.3
Q ss_pred chhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhcc-----CchHH-HHHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 33 FSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPII-LLIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 33 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~~-~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
.+...|.+.++.|.|.++++.++.... ...+.++.|++.||+ |||+. ++++.+..+++...+++.. +..
T Consensus 31 ~~~~l~~~l~~~g~~~~~ig~~~~~~~-~~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~----~~~ 105 (491)
T PRK11010 31 TSGTLQAWMTVENIDLKTIGFFSLVGQ-AYVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE----PGT 105 (491)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC----Ccc
Confidence 344567777788999999998643332 234689999999999 99986 6577777767766655431 113
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+++.+.+.+++.+++.+....+......+|+| ++||++.++...+..+|..+.+.+...+.+
T Consensus 106 ~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 106 QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 57777777888888887777777888999998 679999999999999998888776655543
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.57 E-value=1.1e-13 Score=154.25 Aligned_cols=129 Identities=14% Similarity=0.048 Sum_probs=98.3
Q ss_pred hcHHHHHHHcCCChhh--hHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 35 NYSDALKTLMNLTQLE--LNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~--~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
...+.+.++++.+.+. .+++.+...++.. +++++|++.||+|||++++++.++..++.++..++... .+++.+
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~----~~~~~l 106 (1146)
T PRK08633 31 LIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL----GWFWLA 106 (1146)
T ss_pred HHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH----ccHHHH
Confidence 3445566677766544 4555666666665 48999999999999999999887766655554433211 357888
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++.+++.|++.++..++...++.+++| ++|++++|+..++..+|..+.+.+...+.
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~ 163 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLF 163 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999888888889999998 57999999999999999888877766554
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.57 E-value=1.2e-13 Score=135.67 Aligned_cols=238 Identities=11% Similarity=0.022 Sum_probs=151.2
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCch----HHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAP----IILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r----~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+.|.+.+++|.|..+++++.+...+... .+++.|++.||+|+| +.+.++.....+. +.. . ++++|
T Consensus 25 p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~--~----~~~~~ 95 (382)
T PRK11128 25 PFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVA---FWF--G----AHSFW 95 (382)
T ss_pred hhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHH---HHH--h----cccHH
Confidence 34566778899999999997777777765 489999999999984 3333332222211 111 1 14688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 189 (394)
.+++.+++.|++.+........+ ..+++++|+++.|.......+|.++.+++...+.+
T Consensus 96 ~l~i~~~l~g~~~~~~~~~~~a~-~~~~~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~--------------------- 153 (382)
T PRK11128 96 LLFVAIGLFNLFFSPLVPLTDAL-ANTWQKQIGLDYGKVRLWGSIAFVIGSALTGKLVS--------------------- 153 (382)
T ss_pred HHHHHHHHHHHHHcccccHHHHH-HHHHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 88888888888776654444444 44457789999999988888998888888877654
Q ss_pred hhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 016123 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (394)
Q Consensus 190 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (394)
..+||..+...++. . ++...+. . .++ ++
T Consensus 154 -----------------~~g~~~~f~~~~~~-----~----------------------~~~~~~~---~---~~~-~~- 181 (382)
T PRK11128 154 -----------------WFGEQAILWILTAG-----V----------------------ASMLLGQ---L---LRP-TI- 181 (382)
T ss_pred -----------------HcChhHHHHHHHHH-----H----------------------HHHHHHH---H---ccC-CC-
Confidence 34666544221100 0 0000000 0 110 00
Q ss_pred cCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhccccee
Q 016123 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (394)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~ 349 (394)
+++ ++ + +++ .+ ....+.++.+|+|.||.+.+..++......
T Consensus 182 ~~~-----------~~---~---------------~~~------~~----~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 222 (382)
T PRK11128 182 MPQ-----------GE---S---------------RQQ------ES----AGWPAWKALLKEPTVWRFLLCVSLLQGSHA 222 (382)
T ss_pred CCc-----------cc---c---------------ccc------cc----cccchHHHHHcChhHHHHHHHHHHHHHHhH
Confidence 000 00 0 000 00 012357899999999988777666655544
Q ss_pred eeeeChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 350 AVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 350 ~~~~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+.+..+++.++.|.++ .+...++..+...++++..|++.||+++
T Consensus 223 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~ 269 (382)
T PRK11128 223 AYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSA 269 (382)
T ss_pred hHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
Confidence 56677778888888873 5567777888899999999999999874
No 77
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.56 E-value=9.3e-14 Score=133.96 Aligned_cols=286 Identities=13% Similarity=0.110 Sum_probs=191.3
Q ss_pred cCCCCcHHHHHHHHHHHHHhccc-ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHH
Q 016123 8 TSSAGKWLGFVTAVWVQAISGNN-YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGS 85 (394)
Q Consensus 8 ~~~~~~w~~l~~~~~~~~~~g~~-y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~ 85 (394)
|..+|||+++++..+.....+.. ..|+.......+.|| +....-|.+....+..+ +++++-|+.||+|-|...++|.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 57789999998888877766653 456666667788899 55555566666666655 5899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCchHH--HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHH
Q 016123 86 LEGLVGYGAQWLVVSRKIQPLSYW--QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDL 162 (394)
Q Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~--~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i 162 (394)
++.++|..+-..+....++ +.++ ....+..+.+.++-+....+.+...-||| ++|..|..+...++.+|.++...+
T Consensus 117 ~ln~iGa~Ir~iss~p~v~-~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 117 VLNGIGAWIRLISSLPFVP-PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHhhhccCcccc-ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 9999999887665433232 2344 34456778888777776677789999997 689999999999999998877655
Q ss_pred HHhhcCCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHH
Q 016123 163 CSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALI 242 (394)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 242 (394)
-..+.++ +++. ++..|-....+.+.-++++
T Consensus 196 ppilV~~--------------------------~~~~------~~~~~~~~~~f~~~~~l~~------------------ 225 (480)
T KOG2563|consen 196 PPILVPS--------------------------SKDS------EDNSWLFFTLFLGVECLAA------------------ 225 (480)
T ss_pred cceecCC--------------------------CCCc------chhHHHHHHHHHHHHHHHH------------------
Confidence 4444331 1111 1233332211111100011
Q ss_pred HHHHHHHHHHhhhhhcccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCc
Q 016123 243 FSGILIILLASPVAIPVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGED 322 (394)
Q Consensus 243 ~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (394)
++ +++.+. .+++ +|+ .+| +. ...+ .+ +..--
T Consensus 226 ------l~--l~l~~~----~~~~---~P~----------tPp---s~-------------s~~~------~~--~~~f~ 256 (480)
T KOG2563|consen 226 ------LL--LALVLF----VFTK---KPP----------TPP---SA-------------SQAA------LQ--DASFP 256 (480)
T ss_pred ------HH--HHHHHH----hcCC---CCC----------CCC---ch-------------hHhh------hh--cCcHH
Confidence 00 111111 1211 121 112 10 0000 01 01113
Q ss_pred chHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 323 HTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 323 ~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+.++.+++++|-++.+++.++.|.-....+.+-..+...||+ ++.....+.-+.+++|.+++|.+.||.++
T Consensus 257 ~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~ 330 (480)
T KOG2563|consen 257 KSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKK 330 (480)
T ss_pred HHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 5788999999999999999999888888888877777788887 56677777889999999999999999864
No 78
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.56 E-value=1e-13 Score=137.85 Aligned_cols=150 Identities=19% Similarity=0.118 Sum_probs=88.5
Q ss_pred CCcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
++-|...+..++...+.+ ...+.+...+++++|+|+.+.+++.+...+... .+++.|++.||+|+|++++++....+
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred cchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 344554443333333322 233445556788899999999997666666665 58999999999999999988766665
Q ss_pred HHHHHHHHHHHhccCCchHHH--HHHHHHHHhhhhhhhhhhHHHHHHH---hcccCCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQ--MCVFLCMGGNSTTWMNTAVLVTCIR---NFRRNRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~--l~~~~~l~G~g~g~~~~~~~~~~~~---~Fp~~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
++......... .+.+. ......+.++..+..+.+....... .++++||.+.|......++|.++.+++..
T Consensus 88 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g 162 (420)
T PRK09528 88 VLFGPFFIYVF-----APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAG 162 (420)
T ss_pred HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHH
Confidence 54332211100 01111 1111222232222222222223333 34567888999998888899988888766
Q ss_pred hhc
Q 016123 165 ALF 167 (394)
Q Consensus 165 ~~~ 167 (394)
.+.
T Consensus 163 ~l~ 165 (420)
T PRK09528 163 ILF 165 (420)
T ss_pred HHH
Confidence 554
No 79
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.56 E-value=2.1e-13 Score=133.94 Aligned_cols=238 Identities=10% Similarity=-0.050 Sum_probs=154.0
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHH----HHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIIL----LIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~----~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+.|.+.+++|+|.++++++.+...+... .+++.|.+.||+|+|+.. .++..+..+.. ... .+++|
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~--~~~-------~~~~~ 95 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAF--SAG-------AHNAW 95 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH--HHh-------hhhHH
Confidence 34567888999999999997666666654 589999999999985432 33322222211 111 13688
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 189 (394)
.+++.+++.+.+.+...+.... +..+++++|+++.|......++|..+.+++...+.+
T Consensus 96 ~l~~~~~l~~~~~~~~~p~~~a-l~~~~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~--------------------- 153 (382)
T TIGR00902 96 LLFIAIGLFALFFSAGMPIGDA-LANTWQKQFGLDYGKVRLIGSAAFIIGSALFGGLIG--------------------- 153 (382)
T ss_pred HHHHHHHHHHHHHccchhHHHH-HHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 8888888777776654444434 445667889999999999999999998888777654
Q ss_pred hhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccc
Q 016123 190 IFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLN 269 (394)
Q Consensus 190 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~ 269 (394)
..+||..+.....+ .+++.... . +++
T Consensus 154 -----------------~~g~~~~f~~~~~~---------------------------~~~~~~~~---~---~~~---- 179 (382)
T TIGR00902 154 -----------------MFDEQNILAILTAG---------------------------LAFMLIGF---L---IKP---- 179 (382)
T ss_pred -----------------HcChhHHHHHHHHH---------------------------HHHHHHHH---H---cCC----
Confidence 34566543211100 00000000 0 111
Q ss_pred cCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhccccee
Q 016123 270 RKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGL 349 (394)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~ 349 (394)
+++. .++ + +++ +. + +..+.++.+|+|+||.+.+..++..++..
T Consensus 180 ~~~~---------~~~---~---------------~~~------~~-~---~~~~~~~~l~~~~~~~~l~~~~l~~~~~~ 222 (382)
T TIGR00902 180 TIPP---------KDA---I---------------PED------ES-Q---GDSAFIALLKNPMNLRFLAAVCLIQGAHA 222 (382)
T ss_pred CCCC---------Ccc---c---------------ccc------cc-c---cchhHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 1000 000 0 000 00 0 12346789999999999998888777777
Q ss_pred eeeeChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 350 AVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 350 ~~~~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+.++.+++.++.|.++ .....++..+...++.+.+|.+.||+++
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~ 269 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSA 269 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCH
Confidence 78888899999999874 5567778889999999999999999863
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.55 E-value=1.9e-13 Score=135.09 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=99.4
Q ss_pred hcccccchh-cHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhcc-----CchH-HHHHHHHHHHHHHHHHHHHH
Q 016123 27 SGNNYTFSN-YSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRI-----PAPI-ILLIGSLEGLVGYGAQWLVV 99 (394)
Q Consensus 27 ~g~~y~~~~-~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-----G~r~-~~~~g~~~~~~g~~~~~~~~ 99 (394)
-|..+.+.. -.|.+-++.|+|.+|++++...... .++.++.|++.||+ |+|| .+.++.+..+++....++..
T Consensus 11 ~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~ 89 (402)
T PRK11902 11 SGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP 89 (402)
T ss_pred HhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC
Confidence 344444432 3455666789999999997655543 46699999999999 8876 67777777777777665431
Q ss_pred HhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 100 SRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 100 ~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
. ..+++.+++..++.+...+..+++....+.+++|+ +|+++.++...++++|..+.+.+...+.
T Consensus 90 ~----~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 90 P----HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred c----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 1 13467676666666666666667778889999985 5999999999999999888887766554
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.53 E-value=1.4e-12 Score=124.53 Aligned_cols=264 Identities=18% Similarity=0.150 Sum_probs=182.7
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
-...+..|.+++.|++++.|.+++..+...+... +++.|++.+|+|.|+.+++|..++++|..+++-+... .++.
T Consensus 30 ~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~----~~y~ 105 (422)
T COG0738 30 CLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS----KSYG 105 (422)
T ss_pred hcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh----hhHH
Confidence 3557889999999999999999988887777754 8899999999999999999999999999998754221 3455
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
.++...++.|.|.+...++....+....|+ +...-+.+.++.+++|+++.+++...++..++.
T Consensus 106 ~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~---------------- 169 (422)
T COG0738 106 FFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA---------------- 169 (422)
T ss_pred HHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh----------------
Confidence 555677889999999889999999999975 677889999999999999999999887753200
Q ss_pred hhhcccccCCC-CCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccc
Q 016123 189 AIFFLRETTPA-STVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWN 267 (394)
Q Consensus 189 ~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~ 267 (394)
..-.++. ....++....+++.|...+ .+.+ ++..- .. +. +
T Consensus 170 ----~~~~~~~~~~~~~~~~~~v~~pYl~~~--------------------------~~lv-ll~v~--~~----~~-k- 210 (422)
T COG0738 170 ----LTMSAAQILAIKGADASSVQFPYLILA--------------------------GLLV-LLAVL--IL----LS-K- 210 (422)
T ss_pred ----hccCHHHHHHHHHHHHHhhhhHHHHHH--------------------------HHHH-HHHHH--HH----hc-c-
Confidence 0000000 0000000112233222111 0111 11100 00 11 1
Q ss_pred cccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccc
Q 016123 268 LNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGT 347 (394)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~ 347 (394)
.|+.+ +.+| +. . + ..+.+..+++|+|.+|+-.+..++-.|.
T Consensus 211 --~p~~~-------~~~~--------------------~~--~---~-----~~~~~~~~l~~~~~~~~gvl~~FlYVG~ 251 (422)
T COG0738 211 --LPDLQ-------VAAP--------------------SL--G---A-----SGSAGLSSLFQNKHLRLGVLAIFLYVGA 251 (422)
T ss_pred --CCcCC-------cccc--------------------cc--c---c-----cccchHHHHHhChHHHHHHHHHHHHHhH
Confidence 11000 0011 00 0 0 0122678999999999999999999999
Q ss_pred eeeeeeChHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchh
Q 016123 348 GLAVMNNMGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (394)
Q Consensus 348 g~~~~~n~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (394)
-.+.-+.+.+++.+ .|.+ +++.+++.+-++-++||++.-++..|+
T Consensus 252 Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~ 299 (422)
T COG0738 252 EVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI 299 (422)
T ss_pred HHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999 6766 477899999999999998777665554
No 82
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.52 E-value=1.8e-14 Score=139.21 Aligned_cols=142 Identities=18% Similarity=0.164 Sum_probs=116.8
Q ss_pred CcHHHHHHHHHHHHHhc-ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISG-NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g-~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
+.|+.++.-+++.+..- ..|+..--.+.++++||.+.+..+++++...+... .+|+.|++.|||.||.++.+|..++.
T Consensus 30 ~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~ 109 (493)
T KOG1330|consen 30 SPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWT 109 (493)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHH
Confidence 34444554444444332 35666666788999999999999998887777765 59999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHH
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFT 160 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~ 160 (394)
++.++.++. ..+|++.++|.+.|+|.+...+.+...++..||+ +|+++.++...+...|+.+.-
T Consensus 110 ~Av~~~~fs-------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~ 174 (493)
T KOG1330|consen 110 LAVFASGFS-------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGY 174 (493)
T ss_pred HHHHHHHHH-------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeE
Confidence 999988775 3689999999999999998888899999999995 899999999988877765553
No 83
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.51 E-value=4e-13 Score=149.66 Aligned_cols=240 Identities=11% Similarity=0.025 Sum_probs=150.8
Q ss_pred HHHHcCCChhh-hHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHH--HHHHHHHHHHHHHHHHHhccCCchHHHHHHHH
Q 016123 40 LKTLMNLTQLE-LNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLI--GSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (394)
Q Consensus 40 l~~~~g~s~~~-~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~--g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (394)
+.+..+.+... .++...+..+... +++++|++.||+|+|+++.. ...+.........+.. .+++++++.+
T Consensus 42 ~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~------~s~~~l~~~~ 115 (1140)
T PRK06814 42 LSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHL------NSVPLLFAAL 115 (1140)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHH------hhHHHHHHHH
Confidence 33444444434 4445555556554 58999999999999998643 2222222222222211 3688899999
Q ss_pred HHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 116 CMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
++.|++.++..++..+++.+++| ++|++++|+..++.++|.++.+++...+...
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~------------------------- 170 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATIS------------------------- 170 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-------------------------
Confidence 99999999888888899999998 5799999999999999999998888777642
Q ss_pred ccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccccccccccCCCC
Q 016123 195 ETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNLNRKRTE 274 (394)
Q Consensus 195 ~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~ 274 (394)
.+|+..+.... .+. ++...+... +.+ .++.+
T Consensus 171 -------------~~~~~~~~~~~-----~~~-----------------------~~~~~~~~~----~~~----~~~~~ 201 (1140)
T PRK06814 171 -------------GNFVILVALLM-----GIA-----------------------VLGWLASLF----IPK----TGNAA 201 (1140)
T ss_pred -------------cccHHHHHHHH-----HHH-----------------------HHHHHHHhh----CCC----CCCCC
Confidence 34443321100 000 000000000 110 00000
Q ss_pred CCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccceeeeeeC
Q 016123 275 PDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNN 354 (394)
Q Consensus 275 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n 354 (394)
.+.++ + .+. . ......++++.+++.+|.+.+.+++......++...
T Consensus 202 ------~~~~~---~---------------~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1140)
T PRK06814 202 ------PDLKI---D---------------RNI--I--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQ 247 (1140)
T ss_pred ------CCCee---c---------------cch--H--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 000 0 000124678889999999999888776666666677
Q ss_pred hHHHHHH-hCCC--cchhhHHHHHHHHHHhhhhhccccchhc
Q 016123 355 MGQIGLA-LGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 355 ~~~i~~~-~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
++.+.++ +|.+ ..+.+.+.++++..+|.++.|+++|+..
T Consensus 248 ~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~ 289 (1140)
T PRK06814 248 LPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRI 289 (1140)
T ss_pred hHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCce
Confidence 8888876 4665 3667889999999999999999998754
No 84
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.50 E-value=1.4e-16 Score=159.51 Aligned_cols=156 Identities=18% Similarity=0.159 Sum_probs=124.0
Q ss_pred hhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhh
Q 016123 50 ELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTA 128 (394)
Q Consensus 50 ~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~ 128 (394)
+.++..+...+|..+ +++.|.+.||+|||+++.++.++..+|.++..++... .+++.+++.|++.|++.|..+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccc
Confidence 355666777778765 7899999999999999999999999999887764100 16778888999999999988888
Q ss_pred HHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC---CChhHHHHHHHHHHHHHHHhhhhcccccCCCCCccc
Q 016123 129 VLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA---DDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTVDE 204 (394)
Q Consensus 129 ~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~~~ 204 (394)
...++.|.-| ++||...++...+..+|..+...+...... ++.|+..+..+.++.++.++..+++||+|++...++
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKG 202 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccc
Confidence 8888999987 579999999999998887766555433322 246999999999999888888899999999986544
Q ss_pred ccccc
Q 016123 205 EKEEA 209 (394)
Q Consensus 205 ~~~~~ 209 (394)
+.++.
T Consensus 203 ~~~~A 207 (451)
T PF00083_consen 203 RDEEA 207 (451)
T ss_pred ccccc
Confidence 33333
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.49 E-value=2.1e-12 Score=127.38 Aligned_cols=130 Identities=17% Similarity=0.047 Sum_probs=79.1
Q ss_pred cHHH-HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhc-cCCchHHHHH
Q 016123 36 YSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK-IQPLSYWQMC 112 (394)
Q Consensus 36 ~~~~-l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~-~~~~~~~~l~ 112 (394)
+.|. +++++|+|..+.+++.+...+... .+++.|++.||+|||+.++.+.+..+++........... ......+..+
T Consensus 24 ~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (396)
T TIGR00882 24 FFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAI 103 (396)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 4443 577899999999997666666665 589999999999999999987776665544322111000 0000122233
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
+.+++.|++.+...+.......+ .+++++...|.......+|.++.+.+...+
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l 156 (396)
T TIGR00882 104 VGGLYLGFVFSAGAGAIEAYIEK-VSRNSNFEYGKARMFGCVGWALCASIAGIL 156 (396)
T ss_pred HHHHHHHHHhccchhhHHHHHHH-hhhhcccccchhhhhcccHHHHHHHHHhhh
Confidence 44566666555443322222222 224466677777777788888877765443
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=1.5e-12 Score=129.58 Aligned_cols=81 Identities=11% Similarity=0.083 Sum_probs=59.8
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCc-hHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPA-PIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
+.+.+++++|+|.+|++++.....++.. .+++.|++.||+|+ |+++.++.+...++.....+. ++++.+++
T Consensus 25 l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 97 (418)
T TIGR00889 25 LGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQV-------TTPAGMFP 97 (418)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh-------cCHHHHHH
Confidence 3444678899999999998777777776 48999999999965 778887777776666555432 35666666
Q ss_pred HHHHHhhhhh
Q 016123 114 FLCMGGNSTT 123 (394)
Q Consensus 114 ~~~l~G~g~g 123 (394)
.+++.|++.+
T Consensus 98 ~~~l~~~~~~ 107 (418)
T TIGR00889 98 VLLANSLAYM 107 (418)
T ss_pred HHHHHHHHHc
Confidence 6777666544
No 87
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.46 E-value=6.4e-12 Score=123.88 Aligned_cols=147 Identities=14% Similarity=0.038 Sum_probs=85.5
Q ss_pred CcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHHHH-HHHhhhhhhhhhHhhhhccCchHHHH-HHHHHHH
Q 016123 12 GKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNLSV-VKDIGKAFGLLAGLASDRIPAPIILL-IGSLEGL 89 (394)
Q Consensus 12 ~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~-~~~~~~~~~~~~G~l~Dr~G~r~~~~-~g~~~~~ 89 (394)
+.|..++..++.....+. ......+.+++++|+|.++++++.+ ....+...+++.|.+.||+|+||.++ .+.+..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~--~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGAL--QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hhHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 345444444443332221 2233444478999999999999644 44455566655555599999998754 4455555
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHH-HHHhhhhhhhhhhHHHHHHHhccc-CC--CchHHHHHhhhhhhHHHHHHHHHh
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFL-CMGGNSTTWMNTAVLVTCIRNFRR-NR--GPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~-~l~G~g~g~~~~~~~~~~~~~Fp~-~R--G~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
++..+..++ ++++.+++.+ ++.+.+. ...+.......++.|+ +| +...++..++..+|..+.+++...
T Consensus 94 ~~~~~~~~~-------~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~ 165 (393)
T PRK15011 94 LACTLFAWN-------RNYFVLLFVGVFLSSFGS-TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA 165 (393)
T ss_pred HHHHHHHHh-------hHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 665554443 3566665544 4444433 3333333444454443 23 233477777888998988888776
Q ss_pred hcC
Q 016123 166 LFA 168 (394)
Q Consensus 166 ~~~ 168 (394)
+.+
T Consensus 166 l~~ 168 (393)
T PRK15011 166 LAM 168 (393)
T ss_pred HHH
Confidence 653
No 88
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.43 E-value=9.1e-12 Score=126.29 Aligned_cols=184 Identities=9% Similarity=0.012 Sum_probs=130.4
Q ss_pred CcCCCCcHHHHHHHHHHHHH-hcccccchhc-HHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhc-cCchHHHH
Q 016123 7 YTSSAGKWLGFVTAVWVQAI-SGNNYTFSNY-SDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR-IPAPIILL 82 (394)
Q Consensus 7 ~~~~~~~w~~l~~~~~~~~~-~g~~y~~~~~-~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr-~G~r~~~~ 82 (394)
++..+++|+.+...+..... ....|....+ ...+++++|++.++.+++........ ...+++|++.|| +|+|++++
T Consensus 6 ~~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~ 85 (489)
T PRK10207 6 PMGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIV 85 (489)
T ss_pred CcchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHH
Confidence 44455666655555444332 2234555433 44568899999999998655555444 457899999999 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc---CCCchHHHHHhhhhhhHHHH
Q 016123 83 IGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIF 159 (394)
Q Consensus 83 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gl~~~~~glg~~i~ 159 (394)
+|.+++.+|++.+++.. .....+++.+.+.|+|.|...+.....+.++||+ +|+.+.++...+.++|+++.
T Consensus 86 ~g~~~~~~g~~~~~~~~------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g 159 (489)
T PRK10207 86 LGAIVLAIGYFMTGMSL------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIS 159 (489)
T ss_pred HHHHHHHHHHHHHHHhc------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHH
Confidence 99999999998887641 1123345678888999998877778899999973 35889999999999999988
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhccccc
Q 016123 160 TDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRET 196 (394)
Q Consensus 160 ~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 196 (394)
+.+...+.+...|++.+++..+..++.++..++.++.
T Consensus 160 ~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~ 196 (489)
T PRK10207 160 LSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGM 196 (489)
T ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchh
Confidence 8877777665556666666555555555555444433
No 89
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.35 E-value=3.8e-11 Score=121.93 Aligned_cols=170 Identities=15% Similarity=0.077 Sum_probs=111.8
Q ss_pred ccccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 29 NNYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 29 ~~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
..|.+..+.|++ ++++|++..+..++.....++... .++.|++.||+|||+++.++.+...++.......... .
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~----~ 340 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS----N 340 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC----C
Confidence 345666677876 567899988776665555666654 7899999999999999988876544333222111111 2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFV 184 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~ 184 (394)
+...+++.+++.|++.+...........+.||+ .||+++|+......+++.+.+.+...+.+. +.++...++..++++
T Consensus 341 ~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~ 420 (490)
T PRK10642 341 VIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAV 420 (490)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 345555566666665554444455667789995 599999985544456667777777766653 234444445566777
Q ss_pred HHHhhhhcccccCCCCCc
Q 016123 185 VCLGAIFFLRETTPASTV 202 (394)
Q Consensus 185 v~~~~~~~~~~~p~~~~~ 202 (394)
++++..+++||.|++..+
T Consensus 421 i~~~~~~~~pes~~~~~~ 438 (490)
T PRK10642 421 IGLITGVTMKETANRPLK 438 (490)
T ss_pred HHHHHHHHhccccCCCCC
Confidence 777777788999887653
No 90
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.35 E-value=9.4e-12 Score=127.31 Aligned_cols=151 Identities=16% Similarity=0.120 Sum_probs=126.3
Q ss_pred HHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhh
Q 016123 42 TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGN 120 (394)
Q Consensus 42 ~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (394)
+.++.+.....+..+...+|..+ +++.|.+.||+|||++++.+.++..++.+..+++ ++++.+++.|++.|+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------PNYWMFLIFRFLSGF 183 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------CcHHHHHHHHHHHHh
Confidence 56677777777777777888876 6799999999999999999999999988777765 589999999999999
Q ss_pred hhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 121 STTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 121 g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
+.+..+.....+.+++++ ++|+.+..+ ......++.+.++....+.. .||++.+....+.++.++..++.++.|++
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rw 260 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRW 260 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHH
Confidence 999888888899999996 679999999 77777788888887777776 67887777777777777777777899998
Q ss_pred CCc
Q 016123 200 STV 202 (394)
Q Consensus 200 ~~~ 202 (394)
+..
T Consensus 261 l~~ 263 (521)
T KOG0255|consen 261 LLS 263 (521)
T ss_pred HHH
Confidence 764
No 91
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.34 E-value=8.8e-11 Score=110.78 Aligned_cols=240 Identities=13% Similarity=0.057 Sum_probs=180.3
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
+.+.+...+++++++|.|.++.+.+++.-.+.. .++|++.++..|+|.++.+..+.++.++|..+-... +.
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~--------~~ 99 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG--------GL 99 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc--------cH
Confidence 456677889999999999999999877666555 569999999999999999999999999999876532 35
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
+.++..-.+.|.|.+..++--...+-++||||-|..+|+..+..++|+++.+.+...+-+.
T Consensus 100 ~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~------------------- 160 (395)
T COG2807 100 PLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQH------------------- 160 (395)
T ss_pred HHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHh-------------------
Confidence 6677778889999998888888889999999999999999999999998887766554331
Q ss_pred hhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhccccccccccc
Q 016123 189 AIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFIKSWNL 268 (394)
Q Consensus 189 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~~ 268 (394)
..+||....+.....+.+ ++.-.|. ..|
T Consensus 161 ------------------~~gW~~aL~~WAl~allA------------------------l~~WlPq-------~~r--- 188 (395)
T COG2807 161 ------------------SGGWRGALGFWALLALLA------------------------LLIWLPQ-------ALR--- 188 (395)
T ss_pred ------------------hccHHHHHHHHHHHHHHH------------------------HHHHhhh-------ccc---
Confidence 346776544333211111 1111221 000
Q ss_pred ccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHhcccce
Q 016123 269 NRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLCGVGTG 348 (394)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~~~g~g 348 (394)
+ +.+ + .+. + ..+-....|+|.-|.+-+-+.+.+...
T Consensus 189 -~------------~~~---~---------------~~~------~-------~~~~~~vw~~~~aW~vtLfmGlqS~~~ 224 (395)
T COG2807 189 -E------------QAA---S---------------IAT------K-------LVSVRKVWRSPLAWQVTLFMGLQSLLY 224 (395)
T ss_pred -c------------ccc---c---------------ccc------c-------cccccccccCchhHHHHHHHHhhHHHH
Confidence 0 000 0 000 0 111234789999999999999999999
Q ss_pred eeeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchh
Q 016123 349 LAVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYF 392 (394)
Q Consensus 349 ~~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~ 392 (394)
..++.=+++|+.|.|++ ++..++++..+.....-+...++.+|.
T Consensus 225 Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~ 270 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRS 270 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998 477899999999999999888888764
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.31 E-value=8.1e-11 Score=119.06 Aligned_cols=157 Identities=13% Similarity=0.014 Sum_probs=118.2
Q ss_pred ccchhcHHH-HHHH--cCCChhhhHHHHHHHHhhhh-hhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 31 YTFSNYSDA-LKTL--MNLTQLELNNLSVVKDIGKA-FGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 31 y~~~~~~~~-l~~~--~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
|....+.|. ++++ +|+|..+.+++.....++.. ..+++|++.|| +|+|+++.++.++.+++++++++.
T Consensus 27 ~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~------- 99 (475)
T TIGR00924 27 YGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS------- 99 (475)
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc-------
Confidence 443344444 4666 89999999997666666655 47899999999 899999999999999999887653
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc----CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHH
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR----NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIV 181 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~ 181 (394)
++.+.+++.+++.|+|.|...+.....++++||+ +|+.+.++...+..+|+++.+.+...+.+...|+..+.++.+
T Consensus 100 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~ 179 (475)
T TIGR00924 100 IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAV 179 (475)
T ss_pred ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHH
Confidence 2456667778888999888777778889999974 389999999999999999999888877765456655555544
Q ss_pred HHHHHHhhhhccc
Q 016123 182 PFVVCLGAIFFLR 194 (394)
Q Consensus 182 ~~~v~~~~~~~~~ 194 (394)
..+++++..++.+
T Consensus 180 ~~~~~~l~~~~~~ 192 (475)
T TIGR00924 180 GMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHHHHHHHcc
Confidence 4444444444433
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.30 E-value=4.2e-10 Score=114.83 Aligned_cols=156 Identities=15% Similarity=0.060 Sum_probs=109.6
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
+...+.+.+++|-+ ....|+++...++.. ..++.|++.|.+|||..+++|.++..+|.++.+.+ ++...++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------~~~~~~i 135 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------QNMNTFI 135 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------CcHHHHH
Confidence 44456788899876 566787777777765 47999999999999999999999999999988754 4677788
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhh-h
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA-I 190 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 190 (394)
....+.|+|.|.... ....++|..| |+|+.+.++.....-....+.+.+.+.+.....||+.+.+.+....++++. .
T Consensus 136 ag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 136 AGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 888898998877654 3445788888 569888777665443333344445545544556777666666555555444 4
Q ss_pred hcccccCC
Q 016123 191 FFLRETTP 198 (394)
Q Consensus 191 ~~~~~~p~ 198 (394)
++.++|++
T Consensus 215 ~fY~PP~~ 222 (599)
T PF06609_consen 215 FFYFPPPR 222 (599)
T ss_pred HHhCCCch
Confidence 44454443
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.30 E-value=1.5e-10 Score=117.81 Aligned_cols=155 Identities=8% Similarity=0.040 Sum_probs=113.9
Q ss_pred cccchhcHHH-HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 30 NYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 30 ~y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
.|.+..+.+. +++++|++.++.+++......... ..+++|++.|| +|+|+++.++.++.++++.++.++. +
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~------~ 110 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSG------H 110 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhc------c
Confidence 3555455444 578999999998885544443333 35789999999 5999999999999999988776531 2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccC---CCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN---RGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPF 183 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~---RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~ 183 (394)
+.+.+++.+++.|+|.|.........+.++||++ |+.+.++...+..+|+.+.+.+...+.+...|+..+.++.+..
T Consensus 111 ~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 111 DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 3445556778889998877777778899999842 4567888888999999999888888877656777666666555
Q ss_pred HHHHhhh
Q 016123 184 VVCLGAI 190 (394)
Q Consensus 184 ~v~~~~~ 190 (394)
+++++..
T Consensus 191 ~i~~i~~ 197 (500)
T PRK09584 191 LITVVNF 197 (500)
T ss_pred HHHHHHH
Confidence 5544443
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.29 E-value=1.1e-11 Score=117.77 Aligned_cols=147 Identities=19% Similarity=0.194 Sum_probs=119.8
Q ss_pred HcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhh
Q 016123 43 LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 43 ~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (394)
+.+-+.++++++.....+..+ ..|+.|.+.||+|+|..+++|...+....+++++. .+++.+++.|.+.|+|
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-------~sy~~l~vAR~LQgvg 172 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-------NSYPMLFVARSLQGVG 172 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-------chhHHHHHHHHHhhhh
Confidence 456667888886555555665 59999999999999999999999999999998864 4788899999999999
Q ss_pred hhhhhhhHHHHHHHhccc--CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh-HHHHHHHHHHHHHHHhhhhccccc
Q 016123 122 TTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA-KFLFMLAIVPFVVCLGAIFFLRET 196 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~--~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 196 (394)
.++..++...++++.||+ +||.++|+..++.++|-.+.+++...+++-.+. .-++.++++..+-..+-.+.+++.
T Consensus 173 sA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 173 SAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 999999999999999995 489999999999999999999988888775433 345556666666555555555443
No 96
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.29 E-value=3.2e-11 Score=120.12 Aligned_cols=128 Identities=14% Similarity=-0.002 Sum_probs=86.3
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhc----cCchH-HHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDR----IPAPI-ILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr----~G~r~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+.+.+.+++|++..+++++.+...+... ..|+.|+++|| +|||| .++++.+..+++.+++.... +.......+
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~-~~~~~~~~~ 100 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTP-DFSATGKLV 100 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCC-CCCcchHHH
Confidence 4455688999999999997776666665 58999999998 67745 56778788887777665421 100001133
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
.+++.+++.+.+.++..++..+...+..+ ++|+++.++...+..+|+.+.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~ 157 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVL 157 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445666677777655555566666653 57999999988877777766655443
No 97
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.25 E-value=5.6e-10 Score=112.47 Aligned_cols=158 Identities=11% Similarity=0.029 Sum_probs=111.4
Q ss_pred ccccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhcc-CchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 29 NNYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRI-PAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 29 ~~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
..|....+.|.+ ++++|++..+.+.+........+ ..+++|++.||+ |+|+++++|.++..+|++++... +
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~--~---- 97 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS--E---- 97 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh--h----
Confidence 456666666654 77899999999987666555554 478999999999 99999999999999998766432 1
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc---CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVP 182 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~ 182 (394)
.+...+++...+.++|.|.......+.+.+.||+ +|..+.++...+..+|+.+.+.+...+.+...|+..+.++++.
T Consensus 98 ~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 98 IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Confidence 1112233333334455555444456778999984 5999999999999999999998888887665566655555555
Q ss_pred HHHHHhhhhc
Q 016123 183 FVVCLGAIFF 192 (394)
Q Consensus 183 ~~v~~~~~~~ 192 (394)
.+++++..++
T Consensus 178 m~l~li~~~~ 187 (493)
T PRK15462 178 MIAGLVIFLC 187 (493)
T ss_pred HHHHHHHHHH
Confidence 5555554444
No 98
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.23 E-value=5.7e-10 Score=109.99 Aligned_cols=157 Identities=10% Similarity=0.055 Sum_probs=107.9
Q ss_pred cchhcHHH-HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 32 ~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+..+.|. +++++|++..+.+++.....+..+ ..++.|++.||+|+|+.+..+.+...+........ ++.+
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 306 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------HSPA 306 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-------hhHH
Confidence 34445554 467899999998886544444444 37899999999999998887766555444332221 2344
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGA 189 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~ 189 (394)
.+.+.+++.+++.+...........+.+|++||++.++......+|..+.+.+...+.+...++..+.++.+..++.++.
T Consensus 307 ~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK15011 307 ILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFC 386 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 44455666665555544445566788999999999999988888999999888877766545666666666666666666
Q ss_pred hhcccc
Q 016123 190 IFFLRE 195 (394)
Q Consensus 190 ~~~~~~ 195 (394)
.+++|+
T Consensus 387 ~~~~~~ 392 (393)
T PRK15011 387 LLRIKD 392 (393)
T ss_pred HHhhcC
Confidence 666553
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.22 E-value=5.8e-10 Score=109.72 Aligned_cols=253 Identities=11% Similarity=-0.029 Sum_probs=142.1
Q ss_pred HHhcccccc-hhcHHHHHHHcCCChhhhHHHHH--HHHhhhh-hhhhh-HhhhhccCchHHHHHHHHHHHH-HHHHHHHH
Q 016123 25 AISGNNYTF-SNYSDALKTLMNLTQLELNNLSV--VKDIGKA-FGLLA-GLASDRIPAPIILLIGSLEGLV-GYGAQWLV 98 (394)
Q Consensus 25 ~~~g~~y~~-~~~~~~l~~~~g~s~~~~~~~~~--~~~~~~~-~~~~~-G~l~Dr~G~r~~~~~g~~~~~~-g~~~~~~~ 98 (394)
+..|..+.+ ..+.|.+.++.|.|.++++.++. ...+... .+|+. ++..||+|+||..+++..+... ........
T Consensus 11 ~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~ 90 (390)
T TIGR02718 11 LSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALV 90 (390)
T ss_pred HHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcC
Confidence 344554333 35667788889999999999642 2233443 47777 4579999999997666543222 22222211
Q ss_pred HHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHH
Q 016123 99 VSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFM 177 (394)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~ 177 (394)
........+.+ ...++.++..+......-....++.++ +++...+....+..+|..+.+.....+.+
T Consensus 91 --~~~~~~~~~~~-~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~--------- 158 (390)
T TIGR02718 91 --GPDVAGAGWAV-GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG--------- 158 (390)
T ss_pred --CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Confidence 00000112222 222333333344444444566778874 57888888888888888877765555443
Q ss_pred HHHHHHHHHHhhhhcccccCCCCCccccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhh
Q 016123 178 LAIVPFVVCLGAIFFLRETTPASTVDEEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAI 257 (394)
Q Consensus 178 ~~~~~~~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~ 257 (394)
..+||..+...+.+.+ +...+. +
T Consensus 159 -----------------------------~~gw~~~f~~~a~l~~---------------------------~~~~~~-~ 181 (390)
T TIGR02718 159 -----------------------------KFGQRPAFLLVACVPL---------------------------ASLVCV-L 181 (390)
T ss_pred -----------------------------HhCHHHHHHHHHHHHH---------------------------HHHHHH-H
Confidence 3466655433221100 000110 0
Q ss_pred cccccccccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHH
Q 016123 258 PVYSFIKSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWIL 337 (394)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll 337 (394)
. +++ +++ .++ + +.. + +..+.++.+|+|.+|.+
T Consensus 182 ~----~~~----~~~----------~~~---~---------------~~~------~------~~~~~~~~l~~~~~~~~ 213 (390)
T TIGR02718 182 W----LKD----RAV----------ASP---E---------------APL------A------RRASLFRFFRRPLAWSL 213 (390)
T ss_pred H----cCC----CCc----------Ccc---c---------------cch------h------hHHHHHHHHcCcCHHHH
Confidence 0 111 000 000 0 000 0 01246789999999988
Q ss_pred HHHHHhcccceeeeeeChHHHHHHhCCCc--chhhHHHHH-HHHHHhhhhhccccchhcC
Q 016123 338 FVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTS-IWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 338 ~~~~~~~~g~g~~~~~n~~~i~~~~G~~~--~a~~vsl~s-i~~~~GRl~~G~lsD~~~r 394 (394)
....++............+++.++.|++. ......+.. +...+|.++.|++.||++|
T Consensus 214 ~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 214 LALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 77776665544455556778889999873 445555555 4677899999999999874
No 100
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.22 E-value=2.2e-10 Score=110.99 Aligned_cols=165 Identities=16% Similarity=0.136 Sum_probs=110.9
Q ss_pred ccchhcHHHHHHH-cC-------CChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh
Q 016123 31 YTFSNYSDALKTL-MN-------LTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR 101 (394)
Q Consensus 31 y~~~~~~~~l~~~-~g-------~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~ 101 (394)
++.+...+-+... +| ++....+.+..+..+|.++ +++.|++.||+|||+++....+++.++.+..++....
T Consensus 58 F~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~ 137 (538)
T KOG0252|consen 58 FSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGT 137 (538)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCC
Confidence 4445555545332 22 3444555677778889886 8999999999999999999999999998866554322
Q ss_pred ccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHH---HHHHHhhcCC--------
Q 016123 102 KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIF---TDLCSALFAD-------- 169 (394)
Q Consensus 102 ~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~---~~i~~~~~~~-------- 169 (394)
..+..-.+.++.+|++.|+|.|.-|+.+.+..+|.-. ++||.-.+...+..|+|.... +.+....++.
T Consensus 138 ~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~ 217 (538)
T KOG0252|consen 138 TSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTY 217 (538)
T ss_pred CCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCc
Confidence 2221225678889999999999998777666666665 469999999888887775433 3333333321
Q ss_pred ----ChhHHHHHHHHHHHHHHHhhhhcccc
Q 016123 170 ----DPAKFLFMLAIVPFVVCLGAIFFLRE 195 (394)
Q Consensus 170 ----~~~~~~~~~~~~~~~v~~~~~~~~~~ 195 (394)
..||..+.++++|++..+.--+.+|+
T Consensus 218 ~~ld~vWRl~~glg~vpa~~~ly~Rl~M~E 247 (538)
T KOG0252|consen 218 PHLDGVWRIIFGLGAVPALLVLYFRLKMPE 247 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Confidence 13666666666666655544444433
No 101
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.12 E-value=7e-10 Score=91.46 Aligned_cols=120 Identities=16% Similarity=0.169 Sum_probs=92.5
Q ss_pred hhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc
Q 016123 60 IGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR 138 (394)
Q Consensus 60 ~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp 138 (394)
++.. .+++.|++.||+|+|+.+..+.....++....... ++.+.+.+.+++.|++.+..+........+.+|
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------SNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3443 47899999999999999999998888887766543 356777778888998888777777788899998
Q ss_pred c-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHH
Q 016123 139 R-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVC 186 (394)
Q Consensus 139 ~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~ 186 (394)
+ +|+++.++......+|..+.+.+...+.+...++..+.+.....++.
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 5 69999999999999999999888887776544544444444333333
No 102
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.12 E-value=1.7e-09 Score=107.58 Aligned_cols=160 Identities=9% Similarity=0.074 Sum_probs=109.6
Q ss_pred hcHHHHHHHcCCCh--------hhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 35 NYSDALKTLMNLTQ--------LELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 35 ~~~~~l~~~~g~s~--------~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
.+.+.+.++.|.+. ++.+...+...+... ..++.|++.||+|+|+++.++.++.++++.+.... .. . .
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~-~~-~-~ 305 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYG-DP-E-Y 305 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-Cc-c-h
Confidence 44455555666553 444554444444444 47899999999999999999999888887665542 10 0 0
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHH-hhhhhhHHHHHHHHHhhcCC------ChhHH-HH
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILK-GYVGLSTAIFTDLCSALFAD------DPAKF-LF 176 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~-~~~glg~~i~~~i~~~~~~~------~~~~~-~~ 176 (394)
.+.+.+++..++.|++.+..+......+.+++|+ +||++.|+.. ...++|+++.+.+...+.+. ..++. +.
T Consensus 306 ~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~ 385 (418)
T TIGR00889 306 FGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWL 385 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHH
Confidence 1245556677888888887766777888999995 6999999996 67789999988888877653 12444 34
Q ss_pred HHHHHHHHHHHhhhhcccccC
Q 016123 177 MLAIVPFVVCLGAIFFLRETT 197 (394)
Q Consensus 177 ~~~~~~~~v~~~~~~~~~~~p 197 (394)
+.++...+.+++..+++|++.
T Consensus 386 ~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 386 FFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHHHHhCCcc
Confidence 444555556666667777553
No 103
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.12 E-value=2.4e-09 Score=105.69 Aligned_cols=156 Identities=19% Similarity=0.093 Sum_probs=111.1
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+....+.|.+.++.|++..+.+.+.....++.. ..++.|++.||+|+|+.+.++.+...++....... ++.+
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 309 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-------PSFA 309 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-------CcHH
Confidence 344456778877889999998886666666665 47899999999999999888766666665544322 2445
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~v~~ 187 (394)
.+.+..++.|++.+...........+.+|+ +||++.|+......+|+++.+.+...+.+. ..+...+.......+.++
T Consensus 310 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 310 GMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 555555666666655556667778899985 699999999999999999999998888765 344455555555555555
Q ss_pred hhhhcc
Q 016123 188 GAIFFL 193 (394)
Q Consensus 188 ~~~~~~ 193 (394)
+..+.+
T Consensus 390 ~~~~~~ 395 (406)
T PRK11551 390 LAALLL 395 (406)
T ss_pred HHHHHH
Confidence 554444
No 104
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.11 E-value=3.3e-09 Score=103.16 Aligned_cols=148 Identities=14% Similarity=0.133 Sum_probs=103.6
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+++++|.+..+.+++......... ..++.|++.||+|+|+++.++.+...+.+...... ++.+.+.+..++.
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 298 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------NSLWALLMLQLLN 298 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
Confidence 467899999988885444333333 46899999999999999988877665555443322 2455555566777
Q ss_pred hhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 119 GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
|++.+...........+.+|++|+.+.|+......+|..+.+.+...+.+...++..+.+..+..+++.+..+.+|
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHheec
Confidence 7777766666667778899988899999999888899988888887776654444444444445555555544443
No 105
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.09 E-value=2.4e-09 Score=112.89 Aligned_cols=129 Identities=12% Similarity=0.040 Sum_probs=89.9
Q ss_pred HHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHh
Q 016123 58 KDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRN 136 (394)
Q Consensus 58 ~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~ 136 (394)
..++.+. .+++|++.||+|||++++++.++.+++.+++++. ++.+.+.+.+++.|+..+..+......++++
T Consensus 604 ~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~-------~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 604 GTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG-------NSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444 6899999999999999999999988888776653 2333444445566655555556677888999
Q ss_pred ccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 137 FRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 137 Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
||. +||+++|+..+...+|+++.+.+...+.... ...++++.++..+++.+..+++|
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~-~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT-KAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhCC
Confidence 995 6999999999999999999998887766533 23333334333344444444443
No 106
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.07 E-value=7.7e-09 Score=102.28 Aligned_cols=162 Identities=12% Similarity=0.065 Sum_probs=105.1
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHH-HHHHHHHHHHHHHHHHHHhccCCch
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILL-IGSLEGLVGYGAQWLVVSRKIQPLS 107 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (394)
.+.+..+.|.+.+++|++..+.+++.....++.. ..++.|++.||+|+|+... .+.+..+++.......... . .++
T Consensus 238 ~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~-~-~~~ 315 (402)
T TIGR00897 238 LFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH-F-GHS 315 (402)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc-c-CCc
Confidence 3555667888878899999988876555555655 4789999999999998764 3333333333332221110 0 123
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 187 (394)
.+.+++..++.|++.+.. .+......+..|++||++.|+.+....+|+.+.+++...+++...+...+.+.++..++..
T Consensus 316 ~~~~~~~~~~~G~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~ 394 (402)
T TIGR00897 316 FAVALIIAIALGIFLAGY-VPLAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSA 394 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 455555666667666543 3344556678888999999999999999999999999888876444444444444444444
Q ss_pred hhhhccc
Q 016123 188 GAIFFLR 194 (394)
Q Consensus 188 ~~~~~~~ 194 (394)
+..+++|
T Consensus 395 ~~~~~~~ 401 (402)
T TIGR00897 395 FLTAFIR 401 (402)
T ss_pred HHHHHhc
Confidence 4444444
No 107
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.05 E-value=3.7e-09 Score=106.73 Aligned_cols=159 Identities=14% Similarity=0.033 Sum_probs=99.5
Q ss_pred ccchhcHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 31 YTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 31 y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
+....+.|. +++++|+|..+.++......++..+ .++.|++.||+|+|+.+..+.....++........ . .+.
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-~----~~~ 349 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-A----TSE 349 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-c----CcH
Confidence 345566775 4678999999998876666666654 79999999999999887765544444332222211 1 234
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhh-hHHHHHHHHHhhcC------------CChhHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGL-STAIFTDLCSALFA------------DDPAKF 174 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~gl-g~~i~~~i~~~~~~------------~~~~~~ 174 (394)
+.+++..++.|+..............+++|+ +||++.|+..+...+ |+++.+++...+.+ ...++.
T Consensus 350 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~ 429 (467)
T PRK09556 350 YMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAG 429 (467)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHH
Confidence 4444455555543222112222455699996 699999999887776 66888888888877 223444
Q ss_pred HHHHHHHHHHHHHhhhhccc
Q 016123 175 LFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 175 ~~~~~~~~~~v~~~~~~~~~ 194 (394)
.+.+..+..+++.+..++++
T Consensus 430 ~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 430 TFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555443
No 108
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.05 E-value=3.4e-09 Score=105.32 Aligned_cols=150 Identities=13% Similarity=0.083 Sum_probs=107.0
Q ss_pred HcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhh
Q 016123 43 LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 43 ~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (394)
+.+.+..+.+++.....+... ..++.|++.||+|+|+.+.++.++.+++..+.++. ++.+.+.+.+++.|++
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~-------~~~~~~~~~~~l~g~~ 328 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA-------TGPLEVSILKLLHAFE 328 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-------ccHHHHHHHHHHHHHH
Confidence 346777777776555555554 47899999999999999999999888887776543 3566666777888877
Q ss_pred hhhhhhhHHHHHHHhccc-CCCchHHH-HHhhhhhhHHHHHHHHHhhcCCChhH-HHHHHHHHHHHHHHhhhhcccccCC
Q 016123 122 TTWMNTAVLVTCIRNFRR-NRGPVSGI-LKGYVGLSTAIFTDLCSALFADDPAK-FLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~-~RG~a~gl-~~~~~glg~~i~~~i~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
.+.........+.+++|+ .|+++.+. .+...++|+.+.+++...+.+...++ .+...+++..+..++..+.+|++|+
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 329 VPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 776656666788899985 58877655 45567889999999988887754344 4444555555556666666666554
Q ss_pred C
Q 016123 199 A 199 (394)
Q Consensus 199 ~ 199 (394)
+
T Consensus 409 ~ 409 (420)
T PRK09528 409 L 409 (420)
T ss_pred h
Confidence 4
No 109
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.05 E-value=6.2e-09 Score=99.46 Aligned_cols=152 Identities=22% Similarity=0.223 Sum_probs=117.6
Q ss_pred cchhcHHHHHH-HcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchH-HHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 32 TFSNYSDALKT-LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPI-ILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 32 ~~~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~-~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.+..+.+.+.+ .+|.+..+.+++.....++... .++.|++.||+|+|+ .+.++.++..++....... ++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~ 265 (352)
T cd06174 193 GLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALA-------PSL 265 (352)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHh-------ccH
Confidence 33445566544 4599999999977777777654 789999999999999 9999999998888877653 245
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 187 (394)
+.+.+..++.|++.+...+.......+.+| ++||++.|+......+|..+.+.+...+.+...++..+.+..+..+++.
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~ 345 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAA 345 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHH
Confidence 666677888888888888888889999999 6799999999999999999999999888876555555555544444444
Q ss_pred hhh
Q 016123 188 GAI 190 (394)
Q Consensus 188 ~~~ 190 (394)
+..
T Consensus 346 i~~ 348 (352)
T cd06174 346 LLL 348 (352)
T ss_pred HHh
Confidence 433
No 110
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.04 E-value=2.6e-09 Score=100.85 Aligned_cols=183 Identities=13% Similarity=0.056 Sum_probs=134.6
Q ss_pred CCcHHHHHHHHHHHHH-hcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAI-SGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~-~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
+..|.....+...... .+-....+...|.+.+..|.+..|.++++.....++.. +...|.+.|++|||+...+..+..
T Consensus 74 rfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t 153 (528)
T KOG0253|consen 74 RFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVT 153 (528)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHH
Confidence 3445544444333222 22233446677888999999999999998888889876 789999999999999888777766
Q ss_pred HHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 89 LVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 89 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++.-.+... ++++..+++++.+.|+|.|. ++...+.-.+.-|. +|++-+-.. ..+.+|......+.-...
T Consensus 154 ~v~~~is~~-------spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm 224 (528)
T KOG0253|consen 154 GVFGVISGA-------SPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM 224 (528)
T ss_pred HHHHHhhcC-------CCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH
Confidence 554443221 26788889999999998886 44444444566674 788877776 777888777776666666
Q ss_pred CCChhHHHHHHHHHHHHHHHhhhhcccccCCCCCc
Q 016123 168 ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPASTV 202 (394)
Q Consensus 168 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~~~ 202 (394)
..-.|+++++...+|........+.++++|+-+..
T Consensus 225 ~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~ 259 (528)
T KOG0253|consen 225 SNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLA 259 (528)
T ss_pred HhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhh
Confidence 66689998888889998888888999999988764
No 111
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.02 E-value=7.9e-09 Score=101.79 Aligned_cols=156 Identities=17% Similarity=0.191 Sum_probs=106.4
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
.+.+.+.++.|++. .++......++... .++.|++.||+|+|+.+..+..+.+++....... ++.+.+.+
T Consensus 237 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 307 (399)
T PRK05122 237 TFITLYYAARGWDG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------PSPWMALI 307 (399)
T ss_pred HHHHHHHHHccccc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------ccHHHHHH
Confidence 44555545566643 33433333444443 6899999999999999999888888887766542 24555556
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhc
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFF 192 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 192 (394)
..++.|++.+..+........+.+| ++||++.|+......+|..+.+++...+.+...++..+.+.....+++++..+.
T Consensus 308 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 308 GAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888887766555566678887 579999999999999999888888877766434555555555555555555555
Q ss_pred ccccCCC
Q 016123 193 LRETTPA 199 (394)
Q Consensus 193 ~~~~p~~ 199 (394)
+++.+++
T Consensus 388 ~~~~~~~ 394 (399)
T PRK05122 388 LYRRAPR 394 (399)
T ss_pred hcccccc
Confidence 5554443
No 112
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.01 E-value=6.8e-09 Score=100.42 Aligned_cols=141 Identities=13% Similarity=-0.021 Sum_probs=100.9
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
.+.+++.+++|++..+.+++.....++... .++.|++.||+|+|+.+.++.++..++........ +.+.+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 300 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-----MLNDVLFLA 300 (377)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----cchhHHHHH
Confidence 344556678999988888866666666654 78999999999999999999888888877654431 012222333
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHH
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAI 180 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~ 180 (394)
..++.|++.+..+........+.+| ++||++.|+......+|+.+.+.+...+.+...++..+.+..
T Consensus 301 ~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~ 368 (377)
T TIGR00890 301 TVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTG 368 (377)
T ss_pred HHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHH
Confidence 4455666666555555667889998 579999999999999999999988887776544444444433
No 113
>PRK03545 putative arabinose transporter; Provisional
Probab=98.99 E-value=2.5e-08 Score=98.15 Aligned_cols=153 Identities=12% Similarity=0.055 Sum_probs=100.9
Q ss_pred HHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Q 016123 38 DALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (394)
+.+++++|.|..+.+++.....++.. ..++.|++.||+|+|+. ..+..+..++....... . ++.+.+++..+
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~-~-----~~~~~~~~~~~ 302 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPA-A-----NSEWHLSVLSI 302 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHH-h-----chHHHHHHHHH
Confidence 33566789999888886655555655 47899999999998764 45555554444333221 1 24566666667
Q ss_pred HHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHH-HHhhhhcccc
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV-CLGAIFFLRE 195 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~ 195 (394)
+.|++.+.........+.+..|++||.++|+......+|..+.+.+...+.+....+..+...++..++ .+......++
T Consensus 303 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (390)
T PRK03545 303 FWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFRR 382 (390)
T ss_pred HHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHccc
Confidence 777776554444555666778889999999999888899999888888887765444444444444444 4444455554
Q ss_pred cC
Q 016123 196 TT 197 (394)
Q Consensus 196 ~p 197 (394)
+|
T Consensus 383 ~~ 384 (390)
T PRK03545 383 FP 384 (390)
T ss_pred cc
Confidence 44
No 114
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.97 E-value=2.8e-08 Score=99.32 Aligned_cols=166 Identities=11% Similarity=0.023 Sum_probs=91.8
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (394)
.|.+..+.|++ ++++|++..+.+.......+.. ..+++.|++.||+|+|+.+.++.++..+........... . .+
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~-~--~~ 335 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQN-V--SS 335 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHc-C--Cc
Confidence 45556677775 6678999988887544444443 457889999999999998887766544333222211111 1 12
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhh-hHHHHHHHHHhhcCC-ChhHHHHHHHHHHHH
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGL-STAIFTDLCSALFAD-DPAKFLFMLAIVPFV 184 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~gl-g~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~ 184 (394)
.+.......+.+...+..........+++||+ +||++.|+......+ .+.. ++....+++. +.+...++..++..+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~-~p~~~~~l~~~g~~~~~~~~~~~~~~ 414 (432)
T PRK10406 336 PYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGS-AEYVALSLKSIGMETAFFWYVTLMAV 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhH-HHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 22211111222222232223344667899985 699999998764333 2333 3333334432 223334444555555
Q ss_pred HHHhhhhcccccCCC
Q 016123 185 VCLGAIFFLRETTPA 199 (394)
Q Consensus 185 v~~~~~~~~~~~p~~ 199 (394)
++++..++++++++.
T Consensus 415 i~~~~~~~l~~~~~~ 429 (432)
T PRK10406 415 VAFLVSLMLHRKGKG 429 (432)
T ss_pred HHHHHHHHhhhcccc
Confidence 666666666655543
No 115
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.97 E-value=1.7e-08 Score=100.12 Aligned_cols=159 Identities=14% Similarity=0.116 Sum_probs=114.1
Q ss_pred chhcHHHHHHH-cCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 33 FSNYSDALKTL-MNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 33 ~~~~~~~l~~~-~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
+..+.|.+.++ +|.+..+.+++.....++... .++.|++.||.++|+.+..+.++.+++..++... ++.+.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~ 314 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-------PMWIL 314 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------chHHH
Confidence 34455666444 899999988876666666654 7899999999888888888888877777665432 34555
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHh
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~v~~~ 188 (394)
..+..++.|++.+.........+.+.+|+ +||++.|+......+|..+.+.+...+.+. +....++..+++..+++++
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 394 (417)
T PRK10489 315 AVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVL 394 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 55566777777766555556778899985 599999999998889999998888887764 3344555566666666666
Q ss_pred hhhcccccCC
Q 016123 189 AIFFLRETTP 198 (394)
Q Consensus 189 ~~~~~~~~p~ 198 (394)
....+++.++
T Consensus 395 ~~~~~~~~~~ 404 (417)
T PRK10489 395 LLLVLGELRR 404 (417)
T ss_pred HHHhcccccc
Confidence 6666555443
No 116
>PRK09952 shikimate transporter; Provisional
Probab=98.96 E-value=4.3e-08 Score=98.22 Aligned_cols=162 Identities=9% Similarity=0.077 Sum_probs=101.1
Q ss_pred ccchhcHHHH-HHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 31 y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
|....+.|.+ ++++|.+..+...+.....+.. +..++.|++.||+|+|+++..+.++..++...+...... ..+.
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 343 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEA---QSIF 343 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHc---CChH
Confidence 4444455554 6778998876554433333333 346889999999999999988877665544433322111 1123
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHh-hhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKG-YVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFV 184 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~-~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~ 184 (394)
+.+.+..++.+++.+...........+.||+ +|+.+.|+... +..+|+.+.+.+...+++. +.+...+...++..+
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~ 423 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCL 423 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3333344555666665555566788899995 69999998654 4457888888888887652 234455555555566
Q ss_pred HHHhhhhcccc
Q 016123 185 VCLGAIFFLRE 195 (394)
Q Consensus 185 v~~~~~~~~~~ 195 (394)
++.++.+.+|+
T Consensus 424 i~~v~~~~~~~ 434 (438)
T PRK09952 424 ISAMTALLMKD 434 (438)
T ss_pred HHHHHHHHccc
Confidence 66666655543
No 117
>PRK03699 putative transporter; Provisional
Probab=98.95 E-value=1.8e-08 Score=99.34 Aligned_cols=157 Identities=10% Similarity=-0.038 Sum_probs=104.3
Q ss_pred ccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 31 y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
+.+..+.|.+ ++++|+|..+.+.+.+...++... .++.|++.||+++|+.+.....+..++..+.... ++.
T Consensus 222 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-------~~~ 294 (394)
T PRK03699 222 LTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNT-------DDP 294 (394)
T ss_pred HHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHc-------CCc
Confidence 4555667766 577899999998866665566554 7899999999999999888777666655444321 233
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
+.+.+..++.|++.+..++.......+..|++++...|.......+|+.+.+.+...+.+....+..++......+++.+
T Consensus 295 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 295 SHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 33444455666666655555555566666878888999998888899999999988887653344443333333444433
Q ss_pred hhhccc
Q 016123 189 AIFFLR 194 (394)
Q Consensus 189 ~~~~~~ 194 (394)
...++.
T Consensus 375 ~~~~~~ 380 (394)
T PRK03699 375 MCILLG 380 (394)
T ss_pred HHHHHH
Confidence 333333
No 118
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.94 E-value=4.8e-08 Score=95.90 Aligned_cols=143 Identities=10% Similarity=0.085 Sum_probs=110.2
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
.+..+.|++.+++|.+..+.+.......+.... .++.|++.||+|+|+++.++.+...+.+..+.+. ++.+.
T Consensus 223 ~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~ 295 (382)
T TIGR00902 223 AYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------EAFPL 295 (382)
T ss_pred HHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------hhHHH
Confidence 334456666677999999999865555555554 7899999999999999999999999998877653 46777
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHH-hhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHH
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILK-GYVGLSTAIFTDLCSALFADDPAKFLFMLAIVP 182 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~-~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~ 182 (394)
+++..++.|+..+....+....+.+. | ++|+++.++.. ...++|..+.+.+...+.+......++..+++.
T Consensus 296 ~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~~~~~~~~~~~ 368 (382)
T TIGR00902 296 IFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGAGTFVFMAIIA 368 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 78788999999998888888888887 7 47999999975 467899999988888887654444444444433
No 119
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.93 E-value=6.3e-08 Score=94.40 Aligned_cols=136 Identities=16% Similarity=0.135 Sum_probs=96.3
Q ss_pred cchhcHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 32 ~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+..+.|. +++++|+++.+.+++.....++... .++.|++.||+|+|+.+..+..+..++..++........ .+.+
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 301 (385)
T TIGR00710 224 AFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGL--GSWA 301 (385)
T ss_pred HHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcc--chHH
Confidence 33444454 4668999999998876666666654 789999999999999999988888777766554321110 1233
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCC
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD 170 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~ 170 (394)
.+....++.|++.+..+........+.+|++||.+.++.......++.+.+++.. ...++
T Consensus 302 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~ 361 (385)
T TIGR00710 302 MIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS-LIHGN 361 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH-hcccc
Confidence 3344456677877777766777777888989999999988877777777777766 44433
No 120
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.93 E-value=8e-08 Score=94.96 Aligned_cols=162 Identities=14% Similarity=0.084 Sum_probs=107.6
Q ss_pred cchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 32 TFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 32 ~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+..+.|.+ ++++|++..+.++......++... .++.|++.||+|+|+.+.++.++..++..+........ ..+.+
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~ 310 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS--SHAYL 310 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc--cccHH
Confidence 444445554 677999999888755544455544 78999999999999999999888888877765532111 12344
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH-h
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL-G 188 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~-~ 188 (394)
.+.+..++.|+|.+...+..........|++||++.++......+|..+.+.+...+.+...+..+.+..++..++.+ .
T Consensus 311 ~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 390 (406)
T PRK15402 311 WLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLL 390 (406)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 455566777788776554444444344457899999999999999999999888888776444444444443333333 3
Q ss_pred hhhcccc
Q 016123 189 AIFFLRE 195 (394)
Q Consensus 189 ~~~~~~~ 195 (394)
...++|+
T Consensus 391 ~~~~~~~ 397 (406)
T PRK15402 391 VRIFLKD 397 (406)
T ss_pred HHHHhcc
Confidence 3344444
No 121
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.93 E-value=2.2e-08 Score=99.99 Aligned_cols=166 Identities=15% Similarity=0.076 Sum_probs=105.2
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC----
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP---- 105 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~---- 105 (394)
+....+.|.+.+++|++..+.++......++.. ..++.|++.||+|+|+.+.++.++..++.+............
T Consensus 301 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 301 NAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred eehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 344567788888899999777776655555554 478999999999999999999888887777665321111100
Q ss_pred chHHHHHH-HHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHH-HHHHHHHH
Q 016123 106 LSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF-LFMLAIVP 182 (394)
Q Consensus 106 ~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~-~~~~~~~~ 182 (394)
.+...+.. ..+..+.+.+. .......+.+.+|+ +||++.|+......+|+++.+.+...+.+...+.. +.+.+++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~ 459 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGW-GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLN 459 (481)
T ss_pred hhHHHHHHHHHHHHHHHccc-cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHH
Confidence 02222222 22222222222 13334556899985 69999999999999999999998888776433333 34444444
Q ss_pred HHHHHhhhhcccccC
Q 016123 183 FVVCLGAIFFLRETT 197 (394)
Q Consensus 183 ~~v~~~~~~~~~~~p 197 (394)
.+.+++..++.|+.+
T Consensus 460 ~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 460 VLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHheecccCC
Confidence 444444445555433
No 122
>PRK09669 putative symporter YagG; Provisional
Probab=98.92 E-value=1.5e-08 Score=101.56 Aligned_cols=124 Identities=13% Similarity=-0.054 Sum_probs=80.3
Q ss_pred HHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhc----cCch-HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 38 DALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAP-IILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr----~G~r-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
..+.+++|+|.++++.+....-+.- +..|+.|+++|| +||| +.++.+.+..++...+..... ........+.+
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-~~~~~~~~~~~ 112 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-DFGATGKIIYA 112 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-CCCcchHHHHH
Confidence 3468899999999999655555544 558999999999 6774 556577777777765543321 10001123344
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHH
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDL 162 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i 162 (394)
++..++.+.+..+...+..+...++.+ ++|+...+....+..+|+.+.+.+
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~ 165 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVI 165 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555666677778875 569988888877777776665543
No 123
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.90 E-value=3e-08 Score=96.53 Aligned_cols=136 Identities=13% Similarity=-0.038 Sum_probs=91.7
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHH-HHHHHHHHhccCCc
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGY-GAQWLVVSRKIQPL 106 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~-~~~~~~~~~~~~~~ 106 (394)
.+.+..+.|.+ ++++|.+..+.+.......++.. ..++.|++.||+|+|+.+..+..+..+.. ...... .. .+
T Consensus 235 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ 310 (394)
T TIGR00883 235 FYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMAL-LD---SG 310 (394)
T ss_pred HHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH-hc---CC
Confidence 34455566665 57789999888886655555555 47899999999999998876655444332 222111 11 12
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHH-HhhhhhhHHHHHHHHHhhcCC
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGIL-KGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~-~~~~glg~~i~~~i~~~~~~~ 169 (394)
+.+.+....++.|++.+..+......+.+.+|+ +|+++.|+. ..+..+|+.+.+.+...+.+.
T Consensus 311 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 311 SFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred chHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 445555556667777777777778888999995 699999985 444556777777777776653
No 124
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.89 E-value=5.4e-08 Score=98.16 Aligned_cols=162 Identities=12% Similarity=0.016 Sum_probs=100.4
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
..+.|.+.++.|.+..+..+......+... ..++.|++.||+|+|++++.+.++.+++.+.+........ .+.+. .
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~--~~~~~-~ 367 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA--PGIVA-L 367 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc--ccHHH-H
Confidence 456688888899887766655444444444 4789999999999999999999999888877764322111 11221 1
Q ss_pred HHHHHHhhhhhhhh-hhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc------CCChhH-HHHHHHHHHH
Q 016123 113 VFLCMGGNSTTWMN-TAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF------ADDPAK-FLFMLAIVPF 183 (394)
Q Consensus 113 ~~~~l~G~g~g~~~-~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~------~~~~~~-~~~~~~~~~~ 183 (394)
...++.+.+.+... +.....+++.|| ++||.++|+..+...+|+.+.+.+...+. +...+. .+.+.++...
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGV 447 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHH
Confidence 22223333333222 345677889999 46999999999988888888766654433 222222 3334444444
Q ss_pred HHHHhhhhcccccCC
Q 016123 184 VVCLGAIFFLRETTP 198 (394)
Q Consensus 184 ~v~~~~~~~~~~~p~ 198 (394)
+..++..++.|+..+
T Consensus 448 ~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 448 LAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHhccccCCC
Confidence 444444445555443
No 125
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.89 E-value=9.1e-09 Score=97.72 Aligned_cols=132 Identities=14% Similarity=0.059 Sum_probs=97.4
Q ss_pred cccccchhcHH-HHHHHcCCC----hhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh
Q 016123 28 GNNYTFSNYSD-ALKTLMNLT----QLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR 101 (394)
Q Consensus 28 g~~y~~~~~~~-~l~~~~g~s----~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~ 101 (394)
+..|.+.++.- +++...+-+ ..-.+.+.+.+.++..+ ++..|.+.||+|||+++++|.+..++.+.+.+.+
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S--- 118 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALS--- 118 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHH---
Confidence 44455554432 233333333 33445566667777765 8999999999999999999999999988877654
Q ss_pred ccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 102 KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 102 ~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.++..+.+.|++.|+.-|-. ....+++++.++ |+|+++++...+.+++|-.+.|.+...+-
T Consensus 119 ----~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla 180 (451)
T KOG2615|consen 119 ----RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLA 180 (451)
T ss_pred ----HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHH
Confidence 35644445699999988865 456788899997 57999999999999999888877766543
No 126
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.89 E-value=1.6e-08 Score=100.97 Aligned_cols=130 Identities=13% Similarity=0.014 Sum_probs=88.1
Q ss_pred HHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhh----ccCchHHHH-HHHHHHHHHHHHHHHH-HHhccCCchHH
Q 016123 37 SDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASD----RIPAPIILL-IGSLEGLVGYGAQWLV-VSRKIQPLSYW 109 (394)
Q Consensus 37 ~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~D----r~G~r~~~~-~g~~~~~~g~~~~~~~-~~~~~~~~~~~ 109 (394)
.+.+.+.+|+++..++.+....-+.. +..|+.|.++| |+||||..+ +|.+..++++.++... ..+........
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 34468888999999999655555444 45899999999 899877655 6778888888877643 11100001122
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
.+.+..++..++......+..+...+..+ ++|.+..+....+..+|+.+.+.+...+
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l 163 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPIL 163 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 23344455567777777777777888886 4699999998888888776555554443
No 127
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.88 E-value=9e-08 Score=97.35 Aligned_cols=157 Identities=11% Similarity=0.108 Sum_probs=103.8
Q ss_pred HHHHHHHcCCChhhhHHHH-HHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHH
Q 016123 37 SDALKTLMNLTQLELNNLS-VVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (394)
Q Consensus 37 ~~~l~~~~g~s~~~~~~~~-~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
.|.+.+++|++..+.+++. ....++.+. .+++|++.||+|+|+.+.++.++.+++...+...... .++.+.+...
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~---~~~~~~l~~~ 322 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSIT---DKNLYSMGAA 322 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHH
Confidence 3445678999999999864 455555554 7899999999999998887776655544333221111 1234333333
Q ss_pred HHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhcc
Q 016123 115 LCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFL 193 (394)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 193 (394)
.++..+..++.+.+......+..|+ .+++..|+.++..++|..+.+++...+.+...++..+.+..+..+.+++....+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344444456677788886 589999999999999999998888887775556656666666666666666666
Q ss_pred ccc
Q 016123 194 RET 196 (394)
Q Consensus 194 ~~~ 196 (394)
|+.
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 543
No 128
>PRK10504 putative transporter; Provisional
Probab=98.87 E-value=8.9e-08 Score=96.57 Aligned_cols=130 Identities=11% Similarity=0.053 Sum_probs=93.5
Q ss_pred hcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 35 NYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 35 ~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
.+.|.+ +..+|.+..+.++......++... .++.|++.||+|+|+++.++.++.+++..++.+... ..+.+.+.
T Consensus 282 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 357 (471)
T PRK10504 282 FMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL----LGWYYLLP 357 (471)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc----cccHHHHH
Confidence 345555 446899999888866655555554 689999999999999999998888877666544211 12333333
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+..++.|++.+..+........+.+|+ .||.+.|+......+|..+.+.+...+++
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566777777766667777788885 69999999998888888887777666543
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.85 E-value=1.1e-07 Score=93.88 Aligned_cols=151 Identities=11% Similarity=0.048 Sum_probs=99.9
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+....+.|++.+++|++..+.+.......++... .++.|++.||+|+|+.+.++..+..++...+... . .+..
T Consensus 222 ~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~--~----~~~~ 295 (393)
T PRK09705 222 ASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL--P----LQLP 295 (393)
T ss_pred HHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc--c----chHH
Confidence 3445567777667899999998866666666654 7899999999999999999887777776654321 1 1111
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVC 186 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~v~ 186 (394)
.+. .++.|++.+..+........+.++ ++||++.|+......+++.+.+.+...+.+. +.....+.++.+..++.
T Consensus 296 ~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~ 373 (393)
T PRK09705 296 VLW--AMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGL 373 (393)
T ss_pred HHH--HHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 121 234566666655555555556664 4699999999888888888888888877764 22344444443333333
Q ss_pred Hhh
Q 016123 187 LGA 189 (394)
Q Consensus 187 ~~~ 189 (394)
.++
T Consensus 374 ~~~ 376 (393)
T PRK09705 374 MII 376 (393)
T ss_pred HHH
Confidence 333
No 130
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.85 E-value=1e-07 Score=94.67 Aligned_cols=134 Identities=15% Similarity=0.086 Sum_probs=86.6
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+....+.|.+.++.|.+..+.+.+.....++... .++.|++.||+|+|+.+..+.++..++....... .. .+.+
T Consensus 248 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~ 322 (426)
T PRK12307 248 WPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRI-PQ----DNYL 322 (426)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH-cc----ccHH
Confidence 3444566777677899988888765555555554 7899999999999999988887766655443322 11 1222
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
.+....+..+.+...........+.+.+|+ +||+++|+......+|+.+.+.+...+.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 323 LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 111111111111111112334567899985 699999999988889988888887776654
No 131
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.83 E-value=2.2e-07 Score=90.25 Aligned_cols=163 Identities=12% Similarity=0.007 Sum_probs=120.3
Q ss_pred HhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 016123 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 26 ~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
..|..-.|++..|.+++..|+|.++++++...+.++... ..++|++.|| ++|+.+.....+..+.+..+.+..
T Consensus 224 ~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~----- 297 (394)
T COG2814 224 MTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG----- 297 (394)
T ss_pred HcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc-----
Confidence 345555667777888999999999999977777777765 7999999999 999999988888888777765431
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHH
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFV 184 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~ 184 (394)
.+.+...+..++.|++.+........-.++..|+.++.+.++..+.+.+|.++.+.+....++........+.+.+..+
T Consensus 298 -~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~ 376 (394)
T COG2814 298 -ASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLL 376 (394)
T ss_pred -chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Confidence 2344444444555555554444444455565578999999999999999999999998888887666667777776666
Q ss_pred HHHhhhhcccc
Q 016123 185 VCLGAIFFLRE 195 (394)
Q Consensus 185 v~~~~~~~~~~ 195 (394)
.+++..+..+.
T Consensus 377 ~a~~~~~~~~~ 387 (394)
T COG2814 377 LALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHh
Confidence 66666555443
No 132
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.83 E-value=8.1e-08 Score=97.90 Aligned_cols=135 Identities=12% Similarity=-0.021 Sum_probs=84.8
Q ss_pred cccchhcHHHHHHHcCCChhhhHH------------HHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNN------------LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQW 96 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~------------~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~ 96 (394)
.|+...+.|.+.++.|++..+.+. ......++.+. .++.+++.||+|||++++++.++.+++..+..
T Consensus 304 ~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~ 383 (502)
T TIGR00887 304 FYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLG 383 (502)
T ss_pred HHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHH
Confidence 456666778887788887543211 11222223333 57889999999999999998888877766655
Q ss_pred HHHHhccCCchHHHHHHHHHHHhh-hhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 97 LVVSRKIQPLSYWQMCVFLCMGGN-STTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~-g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
..... .+ .. ..+..+.+...+ +.+. .........|.||. .|+++.|+..+...+|+++.+.+...+++
T Consensus 384 ~~~~~-~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 384 FAYNH-LS-TH-GFLAIYVLAQFFANFGP-NATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHh-cc-hh-HHHHHHHHHHHHHhcCC-CchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 43211 00 11 111111111111 1121 22344556899995 59999999999999999999998888776
No 133
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.82 E-value=3e-07 Score=93.76 Aligned_cols=126 Identities=16% Similarity=0.128 Sum_probs=96.3
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+..+..-|+..++++..+..+-.+ +++++|.+.||+.+|++++.+-++.++............ ..+.|.++++.++.
T Consensus 36 lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~--~~~~~~Ll~~~fl~ 113 (524)
T PF05977_consen 36 LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFG--LLSPWLLLILTFLL 113 (524)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhC--cCCHHHHHHHHHHH
Confidence 444556678888887777777765 599999999999999999999988776555544332211 13678888888999
Q ss_pred hhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
|++.++..++..+.+.+..|+ +...|+++......++..+++.+...++
T Consensus 114 g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 114 GIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 999998888888889999996 6888999988888887777776655543
No 134
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.81 E-value=9.6e-08 Score=95.47 Aligned_cols=164 Identities=13% Similarity=0.084 Sum_probs=98.6
Q ss_pred hcccccchhcHHHH-HHHcCCChhhhHHHHHH-HHhhhhhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 016123 27 SGNNYTFSNYSDAL-KTLMNLTQLELNNLSVV-KDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 27 ~g~~y~~~~~~~~l-~~~~g~s~~~~~~~~~~-~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
.|...+++.+.|.+ ++++ +.......... ..++.+..|++|++.||+|+|+++.++.+...++........... +
T Consensus 265 FG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~-~ 341 (462)
T PRK15034 265 FGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGT-G 341 (462)
T ss_pred HHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence 34444556666665 4444 33322222222 233344589999999999999999999987777665443332111 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc----------------------CCCchHHHHHhhhhhhHHHHHHH
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR----------------------NRGPVSGILKGYVGLSTAIFTDL 162 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----------------------~RG~a~gl~~~~~glg~~i~~~i 162 (394)
+.+++.+.+..+...+..|..+.+..+++.+.||+ +-|.++|+..+.-++|+++.|.+
T Consensus 342 ~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~ 421 (462)
T PRK15034 342 SGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQA 421 (462)
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHH
Confidence 12344444333333344455555667888898984 45788999999999999999988
Q ss_pred HHhhcCC--ChhHHHHHHHHHHHHHHHhhhhcc
Q 016123 163 CSALFAD--DPAKFLFMLAIVPFVVCLGAIFFL 193 (394)
Q Consensus 163 ~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~ 193 (394)
+....+. .....+....+..+++.++.++..
T Consensus 422 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 422 FGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 8877643 223334444444445555555444
No 135
>PRK12382 putative transporter; Provisional
Probab=98.81 E-value=7.3e-08 Score=94.75 Aligned_cols=146 Identities=14% Similarity=0.148 Sum_probs=100.5
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
..+.+.+.++.|++.. +.......++.. ..++.|++.||+|+|+.+..+..+.++++.+.... ++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 306 (392)
T PRK12382 236 GTFVSLYFASKGWAMA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-------PTAWVAL 306 (392)
T ss_pred HHHHHHHHHhcCCchh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-------ccHHHHH
Confidence 3455555556677643 332233334444 47899999999999999999998888887765442 2455555
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
+..++.|++.+..+........+.+| ++||++.|+......+|+.+.+++...+.+...++..+.+.....++..+
T Consensus 307 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 383 (392)
T PRK12382 307 AGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGII 383 (392)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 66777888877766555566778887 67999999999999999999999888887654444444444333344333
No 136
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.81 E-value=2.2e-07 Score=91.17 Aligned_cols=132 Identities=15% Similarity=0.068 Sum_probs=97.8
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
..+.+.+.++.|++..+.+.+.....++... .++.|++.||+|+|+.+.++.+..++++++.... ++.+.+.
T Consensus 225 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~ 297 (382)
T PRK11128 225 YGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------TALPWLI 297 (382)
T ss_pred HHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------hhHHHHH
Confidence 3455666567999998888865555555544 7899999999999999999998888887765543 3566667
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHH-hhhhhhHHHHHHHHHhhcCCChh
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILK-GYVGLSTAIFTDLCSALFADDPA 172 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~-~~~glg~~i~~~i~~~~~~~~~~ 172 (394)
+..++.|++.+..+........+..|++++++.++.. ...++|..+.+.+...+.+....
T Consensus 298 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~ 358 (382)
T PRK11128 298 VIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA 358 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 7788888888877666666677765667888888875 45667777888777777765333
No 137
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.80 E-value=1.7e-07 Score=92.25 Aligned_cols=131 Identities=14% Similarity=0.069 Sum_probs=89.5
Q ss_pred Hhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhc
Q 016123 59 DIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF 137 (394)
Q Consensus 59 ~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F 137 (394)
.++.. ..++.|++.||+|+|+++..+.+...++.+..... ++.+.+++..++.|++.+..++.....+.+..
T Consensus 268 ~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 340 (408)
T PRK09874 268 GVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-------QTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340 (408)
T ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC
Confidence 34443 46789999999999999999888777766654432 24566666777888888876666666666667
Q ss_pred c-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh-hhhccccc
Q 016123 138 R-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG-AIFFLRET 196 (394)
Q Consensus 138 p-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~ 196 (394)
| ++||++.|+......+|..+.+.+...+.+...++..+.......+++.+ ..+..|++
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~~ 401 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRRR 401 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 56999999999989999999888877776654444444444433333333 33333333
No 138
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.80 E-value=1.5e-07 Score=95.52 Aligned_cols=134 Identities=11% Similarity=0.043 Sum_probs=91.0
Q ss_pred chhcHHHHH-HHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 33 FSNYSDALK-TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 33 ~~~~~~~l~-~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
...+.|.+. +++|++..+.+++.+...++... .++.|++.||+|+|+++.++.++..++.+..... . ..+.+.
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~ 368 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI--G---GANVWV 368 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc--c---ccHHHH
Confidence 345667664 68999999999977766666654 7899999999999999988877666555433221 1 123333
Q ss_pred HHHHHHHH-hhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh
Q 016123 111 MCVFLCMG-GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA 172 (394)
Q Consensus 111 l~~~~~l~-G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~ 172 (394)
+.+..++. +.+.+. .......+.+.+|+ +||+++|+..+...+|+.+.+.+...+.+...+
T Consensus 369 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~ 431 (496)
T PRK03893 369 LGLLLFFQQMLGQGI-SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDL 431 (496)
T ss_pred HHHHHHHHHHHhccc-chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCCh
Confidence 33332322 222222 23444567888984 799999999998899999988887777665333
No 139
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.76 E-value=2.6e-07 Score=90.56 Aligned_cols=140 Identities=9% Similarity=0.037 Sum_probs=94.5
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVF 114 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
+.|.+.++.|.+..+.+++.....++.. ..++.|++.||+|+|+++..+.++..++..... . .. .....
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~--------~~-~~~~~ 291 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-S--------QA-AMAPA 291 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-h--------hH-HHHHH
Confidence 4576767789999888886555555554 478899999999999999988888777665432 1 11 11223
Q ss_pred HHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q 016123 115 LCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (394)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v 185 (394)
.++.|++....++.....+.+..|+ +++.+.+.....+++|+++.+.+...+.+...++..+.+.....++
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~ 363 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFI 363 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 3444554444455666667788875 6777888888888999999999988887654444444433333333
No 140
>PRK15075 citrate-proton symporter; Provisional
Probab=98.76 E-value=3.8e-07 Score=91.21 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=83.5
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHH-HHHHHHHHHHhccCCc
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLV-GYGAQWLVVSRKIQPL 106 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~-g~~~~~~~~~~~~~~~ 106 (394)
.+....+.|.+ ++.+|++..+.+++.....++.. ..++.|++.||+|+|++..++.++..+ ++....... . ++
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~---~~ 329 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV-A---AP 329 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-c---CC
Confidence 34455667776 55689999888877666666655 478999999999999998876554432 221111111 1 12
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHh-hhhhhHHHHHHHHHhhcC
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKG-YVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~-~~glg~~i~~~i~~~~~~ 168 (394)
+...+....++.+++.+...........+.+|+ +||.+.|+... +..+++.+.+.+...+.+
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~ 393 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIH 393 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHH
Confidence 232232333334444444444445677899985 69999998643 444456777777766655
No 141
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.75 E-value=6.4e-09 Score=95.01 Aligned_cols=120 Identities=15% Similarity=0.094 Sum_probs=91.5
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
....+++.+.+++.++..++.+....-.++ .+++|+++|| +|.|.-.++=.....+|.++++.- .+ .+.+|.+.
T Consensus 65 alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~G---gi-~~aFw~M~ 140 (459)
T KOG4686|consen 65 ALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAG---GI-SHAFWTML 140 (459)
T ss_pred hhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhc---hH-HHHHHHHH
Confidence 344556777778888887766666666654 7899999998 798887777777777888877642 22 14689888
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHH
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAI 158 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i 158 (394)
+.|++.|+|.-..-++-.+++..||+ |+-+.+.|+....--+|+.+
T Consensus 141 ~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 141 AGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred hhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 99999999875544667788889998 67999999998887888754
No 142
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.74 E-value=2.6e-07 Score=92.92 Aligned_cols=165 Identities=10% Similarity=-0.019 Sum_probs=90.5
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhcc--CchHHH-HHHHHHHHHHHHHHHHHHHhccC
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
.|....+.|.+ ++++|++..+.+.+.....++... .++.|++.||+ |+|+.. .....+..++...+... . .
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~-~--~- 344 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN-P--A- 344 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh-c--c-
Confidence 34555677775 566899998888766555566554 78999999999 555432 22223333333332221 0 0
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHH-HHHHHhhcCCChhHHHHHHHHHH
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIF-TDLCSALFADDPAKFLFMLAIVP 182 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~-~~i~~~~~~~~~~~~~~~~~~~~ 182 (394)
.+.+...+..++.|.+.............+.+|+ +||+++|+......+|+.+. +.+...+.+...++..+.+....
T Consensus 345 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~ 423 (452)
T PRK11273 345 -GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 423 (452)
T ss_pred -cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHH
Confidence 1222222222333332211111222345688985 69999999988777777664 56666665543344444344444
Q ss_pred HHHHHhhhhcccccCCC
Q 016123 183 FVVCLGAIFFLRETTPA 199 (394)
Q Consensus 183 ~~v~~~~~~~~~~~p~~ 199 (394)
.+++++....+...+++
T Consensus 424 ~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 424 SILAVILLIVVMIGEKR 440 (452)
T ss_pred HHHHHHHHHHHhccccc
Confidence 45555555544444443
No 143
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.74 E-value=2e-07 Score=94.90 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=102.3
Q ss_pred cchhcHHH-HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 32 ~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+..+.|. +++.+|+|..+.+.......++.. .+++.|++.||+|+|+.+..|.++..++...+... .. .++.+
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~--~~--~~~~~ 352 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT--DF--STQQW 352 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh--cC--CCchH
Confidence 33344554 577799999999997666666665 48999999999999999999998888887765543 11 12445
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
......++.|+|.|....+......+..| +++|.+.++......+|+.+.+.+...+++
T Consensus 353 ~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 353 QAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566788899988877777777778888 579999999999999999988888777654
No 144
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.73 E-value=1.1e-07 Score=91.67 Aligned_cols=161 Identities=18% Similarity=0.136 Sum_probs=110.3
Q ss_pred HhcccccchhcHHH-HHHHcCCChhhhHHHHHHHH-hhhhhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016123 26 ISGNNYTFSNYSDA-LKTLMNLTQLELNNLSVVKD-IGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (394)
Q Consensus 26 ~~g~~y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~-~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (394)
+.|..-.++.+.|. ++++|+.+..+.+.+..... ++.+.=|.+|+++||+|.+|++.+....+.++..+.++......
T Consensus 230 tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~ 309 (417)
T COG2223 230 TFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFG 309 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccc
Confidence 44555567777776 48899999999988544444 44456799999999999999999999988888777665432111
Q ss_pred CCchHHHHH----HHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHH
Q 016123 104 QPLSYWQMC----VFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFM 177 (394)
Q Consensus 104 ~~~~~~~l~----~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~ 177 (394)
...+.+... ...+..|+|.|. ..+.+...||++-|.+.|+..+.-++|++..+.......+. +....+.+
T Consensus 310 ~~~~~~~~~~~~l~l~~~~G~GnGs----vfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~ 385 (417)
T COG2223 310 HGGSFVVFVAVFLALFVFAGLGNGS----VFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFML 385 (417)
T ss_pred cCcchHHHHHHHHHHHHHhccCcch----heeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHH
Confidence 001222222 235556666664 45889999999999999999999999999988888877764 23333333
Q ss_pred HHHHHHHHHHhhh
Q 016123 178 LAIVPFVVCLGAI 190 (394)
Q Consensus 178 ~~~~~~~v~~~~~ 190 (394)
+.....+..+..+
T Consensus 386 ~~~~~~~a~v~~~ 398 (417)
T COG2223 386 LLAFYLVALVLTW 398 (417)
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 145
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.73 E-value=3.6e-07 Score=91.87 Aligned_cols=171 Identities=8% Similarity=0.023 Sum_probs=105.2
Q ss_pred cccccch---hcHHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhh----ccCchHHHHHH-HHHHHHHHHHHHHH
Q 016123 28 GNNYTFS---NYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASD----RIPAPIILLIG-SLEGLVGYGAQWLV 98 (394)
Q Consensus 28 g~~y~~~---~~~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~D----r~G~r~~~~~g-~~~~~~g~~~~~~~ 98 (394)
|..++|+ .+.+++.+++|.++.+.+++.....+.. +.+|+.|+++| |+|||+.++++ .+...+++.++.++
T Consensus 15 Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 15 GVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 3344444 3455677889999999999766555555 46999999999 59999998875 55555666665543
Q ss_pred HHh------cc-CCchH---HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CC--CchHHHHHhhhhhhHHHHHHHHHh
Q 016123 99 VSR------KI-QPLSY---WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR--GPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 99 ~~~------~~-~~~~~---~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R--G~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
..- .. ..... +...+...+..++......+..+++.+.+|+ +| +.+.++.....++|+.+...+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 00 00001 1122223344456666666777888899984 33 789999888888888887665432
Q ss_pred h-----cC---C-------ChhHHHHHHHHH-HHHHHHhhhhcccccCC
Q 016123 166 L-----FA---D-------DPAKFLFMLAIV-PFVVCLGAIFFLRETTP 198 (394)
Q Consensus 166 ~-----~~---~-------~~~~~~~~~~~~-~~~v~~~~~~~~~~~p~ 198 (394)
. ++ . ..-+..+.++++ ..+..++..+.+||.|.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 2 11 0 122444445554 44444555677788664
No 146
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.72 E-value=1e-07 Score=95.90 Aligned_cols=131 Identities=11% Similarity=-0.045 Sum_probs=93.5
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhc--cCchHHHHHHHHHH--HHHHHHHHHHHHhccCCc
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDR--IPAPIILLIGSLEG--LVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr--~G~r~~~~~g~~~~--~~g~~~~~~~~~~~~~~~ 106 (394)
....+.+++.+++|++..+.+++.+...++.. ..++.|++.|| +++|+...++.... ++++++.... +
T Consensus 259 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~-------~ 331 (455)
T TIGR00892 259 APIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA-------G 331 (455)
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh-------c
Confidence 33446677767789999999886655556655 47899999998 44554444443333 3333332221 3
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
+++.+++.+++.|++.+.........+.+.+|+ +||++.|+......+|+++.+++...+.+.
T Consensus 332 ~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 332 DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehh
Confidence 566667778888888887767777788888885 699999999999999999999888877764
No 147
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.72 E-value=1.5e-07 Score=95.24 Aligned_cols=156 Identities=14% Similarity=-0.049 Sum_probs=88.6
Q ss_pred hcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchH-------HHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 35 NYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPI-------ILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 35 ~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~-------~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
.+.|.+ .+++|++..+.+.+.....++.. ..++.|++.||+|+|+ ...+..++.++........
T Consensus 273 ~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~------- 345 (476)
T PLN00028 273 NIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA------- 345 (476)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc-------
Confidence 344554 67789999998887666666665 4789999999998762 2222222222222221111
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v 185 (394)
.+.+...+..++.+++.+...........+..|++||.+.|+...+..+|+.+.+.+.. .-....++..+++..+..++
T Consensus 346 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 346 NSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHH
Confidence 13333333334444444333333334445566788999999998887788888876653 11112233334444455566
Q ss_pred HHhhhhcccccCC
Q 016123 186 CLGAIFFLRETTP 198 (394)
Q Consensus 186 ~~~~~~~~~~~p~ 198 (394)
+.+..+++|.+.+
T Consensus 425 ~~~~~~~~~~~~~ 437 (476)
T PLN00028 425 CTLPVAFIHFPQW 437 (476)
T ss_pred HHHHHHheeccch
Confidence 6666666664443
No 148
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=1.6e-07 Score=94.95 Aligned_cols=123 Identities=16% Similarity=0.086 Sum_probs=77.7
Q ss_pred HHHHHHcCCChhhhHHHHHHHHhh-hhhhhhhHhhhh----ccCc-hHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 38 DALKTLMNLTQLELNNLSVVKDIG-KAFGLLAGLASD----RIPA-PIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~~~~~~-~~~~~~~G~l~D----r~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
..+.+.+|++..+++.+....-+. .+..|+.|.++| |+|+ |+-+++|.+..++++.++... .+......++.+
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~-p~~~~~~~~~~~ 109 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSA-HLFEGTAQYVFV 109 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcC-CCCCccHHHHHH
Confidence 346788899999999965444444 455899999999 5699 556667888877776665421 110000112233
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHH
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTD 161 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~ 161 (394)
++..++.+++..+..++..+...+.-+ ++|....+....+..+|+.+.+.
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445556666666666667777663 56999888866655666555543
No 149
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.72 E-value=5.3e-07 Score=90.13 Aligned_cols=170 Identities=17% Similarity=0.152 Sum_probs=110.7
Q ss_pred HHhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016123 25 AISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI 103 (394)
Q Consensus 25 ~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (394)
...| .+....|...+-++-|++..+..+.+....+... .++++.+++||+|||++++++..++.+...++.....-..
T Consensus 282 q~sG-i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~ 360 (485)
T KOG0569|consen 282 QFSG-INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSN 360 (485)
T ss_pred HhcC-cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 3456677788888999999988887666655554 4899999999999999999999998887776654322111
Q ss_pred CCchHHH--HH---HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHH
Q 016123 104 QPLSYWQ--MC---VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFM 177 (394)
Q Consensus 104 ~~~~~~~--l~---~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~ 177 (394)
. ...|. ++ ++.++..++.|.. +.++-..+|.||+ .|..|.++......++.++....+..+.+.-+. +.++
T Consensus 361 ~-~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~fi 437 (485)
T KOG0569|consen 361 S-FGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFI 437 (485)
T ss_pred H-hhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhH
Confidence 0 11122 11 2233344444443 4667788999996 699999999999999888877766665543222 4444
Q ss_pred HHHHHHHHHHhhhhcccccCCCC
Q 016123 178 LAIVPFVVCLGAIFFLRETTPAS 200 (394)
Q Consensus 178 ~~~~~~~v~~~~~~~~~~~p~~~ 200 (394)
+-+++.++..+ +..+..||++
T Consensus 438 lF~i~~~~~~i--~~~~~lPETk 458 (485)
T KOG0569|consen 438 LFVIPLAIFLI--YLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHH--HHHHhCcccC
Confidence 44444333332 3334555543
No 150
>TIGR00895 2A0115 benzoate transport.
Probab=98.71 E-value=2e-07 Score=90.86 Aligned_cols=129 Identities=14% Similarity=0.074 Sum_probs=92.5
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+....+.|.+.+++|++..+.+.+.....++.. ..++.|++.||+|+|+......+.....+.+.. . . .+.+
T Consensus 267 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-----~~~~ 339 (398)
T TIGR00895 267 YFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGS-T-L-----FSPT 339 (398)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-H-h-----hCHH
Confidence 344556777888999999988886666666665 478999999999999554443333333333222 1 1 2344
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
.+++..++.|++.+..+......+.+.+|+ +||++.|+..+...+|+.+.+.+...+
T Consensus 340 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 340 LLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 555566777888877777778888999985 699999999999999988888776543
No 151
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.71 E-value=2.5e-07 Score=89.73 Aligned_cols=144 Identities=13% Similarity=0.026 Sum_probs=87.6
Q ss_pred cchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHH-HHHHHHHHHHHHHHHH--HHhccCCc
Q 016123 32 TFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILL-IGSLEGLVGYGAQWLV--VSRKIQPL 106 (394)
Q Consensus 32 ~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~-~g~~~~~~g~~~~~~~--~~~~~~~~ 106 (394)
.+..+.|.+ ++++|.+..+.+++.....++.. ..++.|++.||+|+|+... .......++.+..... ..+.. +
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 310 (399)
T TIGR00893 233 FFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV--N 310 (399)
T ss_pred HHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc--h
Confidence 344455554 67789999998886666666655 4789999999999996111 1111111111111110 01100 1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCCh-hHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDP-AKFLFML 178 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~-~~~~~~~ 178 (394)
+.+.......+.+.+.+ ..+.......+.+|+ +||++.|+......+|+.+.+.+...+.+... ++..+.+
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~ 383 (399)
T TIGR00893 311 IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMV 383 (399)
T ss_pred hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHH
Confidence 23333333333444444 456677788899985 69999999999999999999999888877533 4433333
No 152
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.71 E-value=2.5e-07 Score=93.36 Aligned_cols=133 Identities=12% Similarity=0.091 Sum_probs=101.6
Q ss_pred chhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 33 FSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 33 ~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
...+.|.+ ++.+|++..+.+++.....++.. ..++.|++.||+|+|+.+.++..+.+++...+.+.... +.+.+.
T Consensus 274 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~ 350 (485)
T TIGR00711 274 SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTP---DTPFLA 350 (485)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCC---CCCHHH
Confidence 33455654 66789999999987666666665 48999999999999999999998888887766522111 124555
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+....++.|+|.+..+.+......+.+| ++||.+.|+......+|+.+.+.+...+++
T Consensus 351 ~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 351 IALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556778888888776666666777888 579999999999999999999988887764
No 153
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.70 E-value=1.2e-06 Score=85.30 Aligned_cols=120 Identities=11% Similarity=0.094 Sum_probs=75.5
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+.+++|++..+.+++.....++.. ..++.|++.||+|+|+++.++.++..+........... +.+.+...+...+.
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 297 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAF 297 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHH
Confidence 567789999999986666666655 47899999999999999998887654432222211100 02344333333333
Q ss_pred hhhhhhhhhhHHHHHHHhcccCCCchHHHHHhh-hhhhHHHHHHH
Q 016123 119 GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGY-VGLSTAIFTDL 162 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~-~glg~~i~~~i 162 (394)
+.+.+.........+.+..|++||.+.++.... +++|+.+.+.+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445556677888899999997654 45665555544
No 154
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.70 E-value=2.7e-07 Score=90.43 Aligned_cols=128 Identities=15% Similarity=0.082 Sum_probs=88.8
Q ss_pred cHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 36 YSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 36 ~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
+.|. +++++|++..+.+++.....++... .++.|++.||+|+|+.+.++.+...+........ . .+.+.+.+
T Consensus 260 ~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~ 333 (405)
T TIGR00891 260 LLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI--G----ANVAVLGL 333 (405)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh--C----CchHHHHH
Confidence 3444 5678999999999876666666654 7899999999999999988876653332222111 1 23444444
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
..++.+...+.........+.+.+|+ +||+++|+......+|+.+.+++...+.+.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 334 GLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 43444433333334455677899984 799999999998899999999988887764
No 155
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.69 E-value=2.9e-07 Score=88.67 Aligned_cols=128 Identities=12% Similarity=-0.035 Sum_probs=98.4
Q ss_pred hcHHHHHH-HcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 35 NYSDALKT-LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 35 ~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
.+.|.+.+ .+|++..+.+.+.....++... .++.|++.||+|+|+.+..+.++.+++.....+. . ++.+.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~ 305 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLT--P----PNFPLFL 305 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhh--c----hhHHHHH
Confidence 44566544 5899999999876666666654 7899999999999999998877777776655443 1 1255666
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+..++.|++.+..++.......+.+|+ +||++.|+......+++.+.+.+...+.+
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677888888887777777888899985 69999999999999999988887766543
No 156
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.69 E-value=7.9e-07 Score=87.43 Aligned_cols=144 Identities=9% Similarity=-0.102 Sum_probs=91.0
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHH-hhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKD-IGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~-~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
+.+++.+|.|++.++++++..... ..... .++.|++.||+|+|+.+.++.++.++...... ........++.+.++.
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 308 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWF-AQAAFWLAPGIAVAWS 308 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HHHHcccCCcHHHHHH
Confidence 344555568999999998654433 34444 67999999999999999887776643332221 1111100012333333
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHH
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAI 180 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~ 180 (394)
...+.+++.+..+........+..+ ++||+..++.++..++|..+.+.+...+.+....+..+..+.
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~ 377 (390)
T TIGR02718 309 CSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGT 377 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3344455556555555666667764 468999999999999999999988888776433333333333
No 157
>PRK11043 putative transporter; Provisional
Probab=98.69 E-value=1.6e-06 Score=85.55 Aligned_cols=137 Identities=15% Similarity=0.099 Sum_probs=92.3
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+.+..+.|.+.+++|++..+.++......++... +.+.+++.||+|+|+....+.+..+++...+....... .++.+
T Consensus 220 ~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 297 (401)
T PRK11043 220 FAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLS--HPSLV 297 (401)
T ss_pred HHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhc--cCcHH
Confidence 3444556777778999999988755544445444 67889999999999987766666555544333221110 12333
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
.+.+...+.|++.+..+........+.+|++||.+.|+..+....++...+++...+.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 298 PLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 334444566677777666666666677898999999999987777778888887777653
No 158
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.64 E-value=1.4e-06 Score=85.48 Aligned_cols=136 Identities=10% Similarity=0.020 Sum_probs=84.5
Q ss_pred HHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Q 016123 38 DALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (394)
|.+++.+|++..+.+++.....++.. ..++.|++.||+|+|+.+..+..+..++.++.... . ++.+...+..+
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~ 297 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFF-G-----GMKTASLIFAF 297 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHH-H-----hhHHHHHHHHH
Confidence 44566789999999887666666665 47899999999999999999888888877655432 1 12333333334
Q ss_pred HHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHH
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLA 179 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~ 179 (394)
+.+.|......+......+..+++|..+.+.......+|.++.+.+...+++. ...+..+...
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~ 361 (382)
T PRK10091 298 ICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPA 361 (382)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHH
Confidence 44444433233233333344433333333344566789999999988888764 3333333333
No 159
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.63 E-value=2.1e-06 Score=84.73 Aligned_cols=130 Identities=8% Similarity=-0.079 Sum_probs=91.2
Q ss_pred HHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHH-HHHHHHHHHHHhccCCchHHHHHHH
Q 016123 37 SDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGL-VGYGAQWLVVSRKIQPLSYWQMCVF 114 (394)
Q Consensus 37 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~~~l~~~ 114 (394)
.|.+.+++|++..+.+.+.....++... .++.|++.||.+ |+....+.++.. .+..+.... ++.+.+.+.
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~-------~~~~~~~~~ 311 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG-------SDKIVATGV 311 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHH
Confidence 3667788999999888866655666654 789999999965 444444444433 333332221 245666666
Q ss_pred HHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHH
Q 016123 115 LCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF 174 (394)
Q Consensus 115 ~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~ 174 (394)
.++.|++.+..+....+.+.+..|++++.+.++......+|..+.+.+...+++....+.
T Consensus 312 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~ 371 (394)
T PRK10213 312 AIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTS 371 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhh
Confidence 777888888777666667888889888888888888888999999998888887543333
No 160
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.59 E-value=2.1e-06 Score=87.62 Aligned_cols=148 Identities=14% Similarity=0.079 Sum_probs=108.7
Q ss_pred cHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 36 YSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 36 ~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
..|.+ ++++|.+....+++..+..+|.+. +.+.+++.+|+++++++..+.+.++++.+.+++. ++.|..++
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------~~~~~~~~ 312 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------PSFWLALI 312 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------hHHHHHHH
Confidence 34555 678999999999988888888876 7899999999999999999998888887776653 35676666
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhh
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI 190 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 190 (394)
..++.|++.....+...+..++.-|+ .||+++++..+....+..+.+.+...+.+....+..+.++.+..++..+..
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 77788888777766677788888896 599999999887766667777766666554333333344444333333333
No 161
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.57 E-value=1.3e-06 Score=87.23 Aligned_cols=158 Identities=16% Similarity=0.175 Sum_probs=88.7
Q ss_pred cchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhcc--CchHHH-HHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 32 TFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 32 ~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
....+.|.+ ++++|++..+.+.......++..+ .++.|++.||+ ++|+.. ....+...+........ . ..
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~--~---~~ 335 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM--P---FA 335 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc--c---cc
Confidence 344466665 477899999988866666666654 78999999998 333322 22221122222111111 1 01
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh-HHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPA-KFLFMLAIVPFV 184 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~ 184 (394)
+.+.+.+..+..|++.............+.+| ++||+++|+.++...+|+++.+++...+.+...+ ..+..++++..+
T Consensus 336 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~ 415 (434)
T PRK11663 336 SYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGI 415 (434)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHH
Confidence 22222222222332221111122334578887 5799999999999999999999998888765333 344444444444
Q ss_pred HHHhhhhccc
Q 016123 185 VCLGAIFFLR 194 (394)
Q Consensus 185 v~~~~~~~~~ 194 (394)
.+++..++.|
T Consensus 416 ~~~~~~~~~~ 425 (434)
T PRK11663 416 SALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHh
Confidence 4444444444
No 162
>PRK09848 glucuronide transporter; Provisional
Probab=98.57 E-value=9.5e-07 Score=88.64 Aligned_cols=123 Identities=9% Similarity=-0.037 Sum_probs=70.3
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhcc----CchHHH-HHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRI----PAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~----G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+...+++.+|++..+++.+.....+... ..|+.|+++||. |||+.. +++.+...+...+..............+
T Consensus 31 l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (448)
T PRK09848 31 LLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVV 110 (448)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHH
Confidence 3445788899999999997666666655 589999999997 667754 5666655544443321110101001122
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhc--ccCCCchHHHHHhhhhhhHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNF--RRNRGPVSGILKGYVGLSTAI 158 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~F--p~~RG~a~gl~~~~~glg~~i 158 (394)
..+...++.+++.++..++......+.- |++|....+.-..+..+++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~ 161 (448)
T PRK09848 111 YAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVC 161 (448)
T ss_pred HHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2233344556666666554444444333 346887766665544444333
No 163
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.56 E-value=1.5e-06 Score=85.62 Aligned_cols=140 Identities=12% Similarity=0.111 Sum_probs=94.9
Q ss_pred CCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhh
Q 016123 45 NLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTT 123 (394)
Q Consensus 45 g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g 123 (394)
+.+....+.+.+...+... ..+..|++.||+|+|+.+.++.++.++++.+.... ++.+.+++..++.|++.+
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~-------~~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA-------TTALEVVILKMLHAFEVP 322 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc-------CChHHHHHHHHHHHHHHH
Confidence 4555566665444444443 47889999999999999999999888877765432 355666666777777766
Q ss_pred hhhhhHHHHHHHhccc-CCCchHHH-HHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHhhhh
Q 016123 124 WMNTAVLVTCIRNFRR-NRGPVSGI-LKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIF 191 (394)
Q Consensus 124 ~~~~~~~~~~~~~Fp~-~RG~a~gl-~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~ 191 (394)
...........+.+|+ .|+++.+. .+....+|+.+.+.+...+.+. +....+.+.+++..+.+++..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 5544455556666664 36666555 4567788999998888888774 3445566666666666655544
No 164
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.55 E-value=1.9e-06 Score=82.33 Aligned_cols=118 Identities=16% Similarity=0.109 Sum_probs=88.4
Q ss_pred HcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhh
Q 016123 43 LMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 43 ~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (394)
++|++..+.+...+....+... .++.+++.||+|+|+++.++.++..++..+.... ++.+.++ ..++.|++
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-------~~~~~~~-~~~l~g~~ 243 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-------HGYVAMW-FVLALGLF 243 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-------CCHHHHH-HHHHHHHH
Confidence 3699999998876666666655 6899999999999999988888777776544322 1222222 33467788
Q ss_pred hhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 122 TTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
.+..++.......+.+|++.+.+.++.. ...+|+++.|++...+.+.
T Consensus 244 ~s~i~P~~~s~a~~~~~~~~~~asai~~-~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 244 NSIMFPTIFSLALNALGRHTSQGSGILC-LAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHHHHH-HHHhcchHHHHHHHHHHHh
Confidence 8888887788888999988888888864 4568999999988877664
No 165
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.53 E-value=4.9e-06 Score=82.24 Aligned_cols=147 Identities=14% Similarity=0.150 Sum_probs=90.2
Q ss_pred HHHHHHcCCChhhhHHHHH-HHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHH
Q 016123 38 DALKTLMNLTQLELNNLSV-VKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~-~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (394)
+.+.+++|++..+.+++.. ....+.. ..++.|++.||+|+|+.+.++.+...+..+.+...... + ++.+.+.+..
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~--~-~~~~~~~~~~ 310 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT--P-KHLWTMALAI 310 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--C-CcHHHHHHHH
Confidence 4467789999999998643 3333444 47899999999999998887777666554433221111 0 1334433322
Q ss_pred ----HHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhh
Q 016123 116 ----CMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAI 190 (394)
Q Consensus 116 ----~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 190 (394)
+..|++.+..+......+.+.+|.+ ..++..+..++|..+.+++...+.+...++.++.++.+..+++++..
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 4555666655666666777777742 34555555577777777776666665556666666555554444433
No 166
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.53 E-value=1.5e-06 Score=84.19 Aligned_cols=120 Identities=10% Similarity=0.071 Sum_probs=84.9
Q ss_pred hhcHHHHHHHcCCChhhhHHHHH-HHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhc----cCCch
Q 016123 34 SNYSDALKTLMNLTQLELNNLSV-VKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK----IQPLS 107 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~-~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~----~~~~~ 107 (394)
..+.|++.+++|++..+.+.+.. ...+.... .+++|++.||+|+|+.+.++.++.+++...+.+..... ...++
T Consensus 229 ~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 229 TVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 34456665569999999987544 33344444 78999999999999999999888877766554321110 00013
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhh
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVG 153 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~g 153 (394)
.+.+....++.+++.+..+.......++.+| ++||+..|+.++..+
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4555556677788888888888899999998 469999999876543
No 167
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.51 E-value=2.2e-06 Score=95.96 Aligned_cols=121 Identities=17% Similarity=0.094 Sum_probs=92.8
Q ss_pred HHHHHHcCCChh-hhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHH
Q 016123 38 DALKTLMNLTQL-ELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFL 115 (394)
Q Consensus 38 ~~l~~~~g~s~~-~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~ 115 (394)
+.+++.+|++.. +.+++.....++.++ +++.|++.||+++|+++.++.++.+++.+++.+. .+.+.+++..
T Consensus 257 ~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 329 (1146)
T PRK08633 257 AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-------PSLASVLVLF 329 (1146)
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-------hhHHHHHHHH
Confidence 345778999998 888877777777764 7899999999999999988888887777666543 2455566667
Q ss_pred HHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHh
Q 016123 116 CMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
++.|++.++...+....+.+.+|+ +||+++|+......+|+++.+.+...
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~ 380 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTL 380 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 778888887766777778888885 69999999988888887665544433
No 168
>PRK10054 putative transporter; Provisional
Probab=98.51 E-value=4.9e-06 Score=82.15 Aligned_cols=149 Identities=9% Similarity=-0.032 Sum_probs=95.3
Q ss_pred HcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhh
Q 016123 43 LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 43 ~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g 121 (394)
+.+.+....+.+.....+... ..++.|++.||+++|+.+..+.++..+++...... . ++.+.+.+..++.|+|
T Consensus 238 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~g 311 (395)
T PRK10054 238 DSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS-G-----NSLLLWGMSAAVFTVG 311 (395)
T ss_pred ccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc-c-----hHHHHHHHHHHHHHHH
Confidence 445566566654333333333 36889999999999999999988888887766532 1 2455555566777777
Q ss_pred hhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChh-HHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 122 TTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPA-KFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
.+...+.....+.+.-|+ +||.+.+... ...+|.++.+.+...+++.... ..+..++...++..++...-.|++|.
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARPW 389 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCcc
Confidence 765544445556676774 6999988765 3457888888888777765433 34444444444444444444555554
No 169
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.50 E-value=2.7e-06 Score=85.77 Aligned_cols=158 Identities=15% Similarity=0.124 Sum_probs=90.4
Q ss_pred ccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHH--------HHHHHHHHHHHHHHHHHHHH
Q 016123 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPII--------LLIGSLEGLVGYGAQWLVVS 100 (394)
Q Consensus 31 y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~--------~~~g~~~~~~g~~~~~~~~~ 100 (394)
+.+..+.|.+ ++++|.+..+.+++.....++.. ..++.|++.||+++|+. +..+......+.........
T Consensus 278 ~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (465)
T TIGR00894 278 TILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYL 357 (465)
T ss_pred HHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4445566765 67789999999987666666665 47899999998765421 11111111111111111110
Q ss_pred hccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCC---hhHHHHH
Q 016123 101 RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD---PAKFLFM 177 (394)
Q Consensus 101 ~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~---~~~~~~~ 177 (394)
. .+.+...+...+.+.+.+...........+..|+.+|.+.|+......+|+.+.+.+...+.+.+ .+...+.
T Consensus 358 --~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~ 433 (465)
T TIGR00894 358 --S--AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFL 433 (465)
T ss_pred --C--CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHH
Confidence 0 12222232333444343433333334455777888999999999999999999998888777542 2444444
Q ss_pred HHHHHHHHHHhhhhc
Q 016123 178 LAIVPFVVCLGAIFF 192 (394)
Q Consensus 178 ~~~~~~~v~~~~~~~ 192 (394)
+..+..+++.+...+
T Consensus 434 ~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 434 IMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHeee
Confidence 444444444444333
No 170
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.49 E-value=1.2e-06 Score=83.65 Aligned_cols=191 Identities=12% Similarity=0.032 Sum_probs=120.9
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVV 185 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v 185 (394)
+++.+.+..++.|.|.++..+.....++...| |++.+.+++.++.+++|+.+.|.+...++...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~--------------- 73 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSG--------------- 73 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcC---------------
Confidence 56777778889999999999999999999987 57999999999999999999998887765310
Q ss_pred HHhhhhcccccCCCCCcc--ccccccchhHhHHHHHHHHHHHHHHHhhccCCCcchhHHHHHHHHHHHHhhhhhcccccc
Q 016123 186 CLGAIFFLRETTPASTVD--EEKEEAKYFSIINTVAIVVALYLQVYDFLPNKSETLALIFSGILIILLASPVAIPVYSFI 263 (394)
Q Consensus 186 ~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~~~~~ 263 (394)
..+....+. +.....|+..+...+.+. . ++...+. . .
T Consensus 74 ---------~~~~~~~~~~~~~~~~~~~~~yl~ia~~~--------------------------~-~~~i~~~-~----~ 112 (310)
T TIGR01272 74 ---------AGDLSMQVATANAEAAKVHTPYLLLAGAL--------------------------A-VLAIIFA-F----L 112 (310)
T ss_pred ---------CcchhhhhhhhhHHHHHHHHHHHHHHHHH--------------------------H-HHHHHHH-H----c
Confidence 000000000 001134554433222110 0 0000000 0 1
Q ss_pred cccccccCCCCCCchhhhcccCCCCCCCCCCccchhhhcchhhhhhhhhcccCCCCCCcchHHHHhhchhHHHHHHHHHh
Q 016123 264 KSWNLNRKRTEPDVEEQQVVEPLLNGETTGTEEVVAVEDTVVAVVAVEEVKRRPVLGEDHTIFEAMWTVDFWILFVSFLC 343 (394)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~t~~Fwll~~~~~~ 343 (394)
+ .|+.+ .++ .++ ++ +++ +...++.+|+|.+|+..+.+++
T Consensus 113 ~-----~p~~~--~~~---~~~-------------------~~-------~~~-----~~~~~~~~~~~~~~l~~~~~f~ 151 (310)
T TIGR01272 113 P-----LPELQ--EAD---VAR-------------------VS-------SGD-----TTQKTSAFQFTHLVLGALGIFV 151 (310)
T ss_pred c-----CCCCC--ccc---ccc-------------------cc-------ccc-----ccchhhHHhhHHHHHHHHHHHH
Confidence 1 11000 000 000 00 000 0112346789999999999999
Q ss_pred cccceeeeeeChHHHHHHh---CCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 344 GVGTGLAVMNNMGQIGLAL---GYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 344 ~~g~g~~~~~n~~~i~~~~---G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
..+.-..+.+.++.++++. |.+ +++...+.+..+-.+||++.+++.||+++
T Consensus 152 yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~ 207 (310)
T TIGR01272 152 YVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQ 207 (310)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 8888888888888888753 665 46788999999999999999999999963
No 171
>PRK10133 L-fucose transporter; Provisional
Probab=98.49 E-value=4.4e-06 Score=83.76 Aligned_cols=120 Identities=9% Similarity=-0.044 Sum_probs=90.4
Q ss_pred HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
++.+|+|..+.++......++... .++.|++.||+|+|+++..+.++..++..+..+. ++.+. .....+.|
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~l~g 358 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-------GGHVG-LIALTLCS 358 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-------CChHH-HHHHHHHH
Confidence 567899999999876666666655 7899999999999999988877776655443321 12222 23345678
Q ss_pred hhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 120 NSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
++.+..++.......+.+|++.+.+.++... ..+|+.+.+++...+.+.
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHHcccchhhccchhHHhH-HhccchHHHHHHHHHHHh
Confidence 8888888888888889999988899998875 447888888888776654
No 172
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.48 E-value=2.8e-06 Score=84.97 Aligned_cols=163 Identities=9% Similarity=-0.070 Sum_probs=84.7
Q ss_pred ccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 31 YTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 31 y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
|.+..+.|.+ +++.|++..+.+++.....++.. ..++.|++.||+++++....+.....+............. .+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 345 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA--GNP 345 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC--Cch
Confidence 4555566665 55679999988886555555554 4789999999997554333333322222111111001100 123
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhH-HHHHHHHHhhcCCChh-HHHHHHHHHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLST-AIFTDLCSALFADDPA-KFLFMLAIVPFVV 185 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~-~i~~~i~~~~~~~~~~-~~~~~~~~~~~~v 185 (394)
+..+...++.|.+.............+.+|+ +||+++|+......+|+ ++.+.+...+.+...+ ..+..+.+...+.
T Consensus 346 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~ 425 (438)
T TIGR00712 346 LVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILA 425 (438)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHH
Confidence 3333223333333211111112345688884 69999999987666665 4566666666554222 3333334434444
Q ss_pred HHhhhhcccc
Q 016123 186 CLGAIFFLRE 195 (394)
Q Consensus 186 ~~~~~~~~~~ 195 (394)
.+...+++++
T Consensus 426 ~~~~~~~~~~ 435 (438)
T TIGR00712 426 VILLIVVMIG 435 (438)
T ss_pred HHHHHHHHhh
Confidence 4444444443
No 173
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.46 E-value=1.2e-05 Score=78.99 Aligned_cols=126 Identities=13% Similarity=0.156 Sum_probs=84.8
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+++.+|++..+.+++.....++... +++.+++.||++++... +.....++........... ..+.+.++...++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 309 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPGWFG--VMNVWTLLVPAALF 309 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhc--cccHHHHHHHHHHH
Confidence 4566899999988866665666654 68899999999833322 2222222222211110000 02345555566778
Q ss_pred hhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 119 GNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
|+|.+..++.......+.+|+++|.+.++..+...+|+.+.+.+...+...
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 888887777777778889999999999999999999999998887665444
No 174
>TIGR00898 2A0119 cation transport protein.
Probab=98.46 E-value=1.9e-06 Score=87.72 Aligned_cols=96 Identities=16% Similarity=0.045 Sum_probs=71.6
Q ss_pred hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCC
Q 016123 64 FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRG 142 (394)
Q Consensus 64 ~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG 142 (394)
..++.+++.||+|||+.+.++.++.+++.++..+.. +...+......++.+++.+..+.......++.||+ .|+
T Consensus 371 ~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~ 445 (505)
T TIGR00898 371 AKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP-----VDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN 445 (505)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh
Confidence 367889999999999999999988888777665431 11123333344455555555566667778899995 699
Q ss_pred chHHHHHhhhhhhHHHHHHHHH
Q 016123 143 PVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 143 ~a~gl~~~~~glg~~i~~~i~~ 164 (394)
+++|+..+...+|+++.+.+..
T Consensus 446 ~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 446 LGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hhHhHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999888776
No 175
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.45 E-value=3.7e-06 Score=85.02 Aligned_cols=168 Identities=17% Similarity=0.153 Sum_probs=105.9
Q ss_pred HHHhcccccc-hhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccC-----chHHHHHHHHHHH-HHHHHHH
Q 016123 24 QAISGNNYTF-SNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLIGSLEGL-VGYGAQW 96 (394)
Q Consensus 24 ~~~~g~~y~~-~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~-~g~~~~~ 96 (394)
.++-|..+.. ....+.+++++|+|.++++.+.+...+...+.++.|.+.||++ ||+.++++.++.. +++..++
T Consensus 35 y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~ 114 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLP 114 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcc
Confidence 3444444222 2344557888999999998877777777778888999999998 7777888876663 3332221
Q ss_pred HHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhh---hhhhHHHHHHHHHhhcCCChhH
Q 016123 97 LVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGY---VGLSTAIFTDLCSALFADDPAK 173 (394)
Q Consensus 97 ~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~---~glg~~i~~~i~~~~~~~~~~~ 173 (394)
. .+ .......+..++.+++.+..+++.-....+..++++....++.... .++|..+.+.+...+.+...|+
T Consensus 115 ~-----~~-~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~ 188 (468)
T TIGR00788 115 G-----KV-SSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTR 188 (468)
T ss_pred c-----cc-chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1 11 1222223367788888888888888899999985554443333333 3467777777776666543455
Q ss_pred HHHHHHHHHHHHHHhhhhcccccC
Q 016123 174 FLFMLAIVPFVVCLGAIFFLRETT 197 (394)
Q Consensus 174 ~~~~~~~~~~~v~~~~~~~~~~~p 197 (394)
..+++.....++.++..++++|++
T Consensus 189 ~~f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 189 ILFLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred hHHHHHHHHHHHHHHHHHhccccc
Confidence 444444433344455566667653
No 176
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.45 E-value=3.6e-06 Score=81.52 Aligned_cols=130 Identities=14% Similarity=0.102 Sum_probs=89.7
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhcc-CchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI-PAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~-G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
+....+.|.+.+++|++..+.+.+.+...++.+. .++.|++.||+ ++|+++.++.++..++...+.+... ...
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 288 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM-----HGL 288 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-----hHH
Confidence 4445567777677899999998876666666655 78999999999 5666777777777777766554311 111
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhc-c-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNF-R-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~F-p-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+ ...++.|++.+..++.......+.+ + +++|.+.|+......+++++.+.+...+.+
T Consensus 289 ~---~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~ 347 (355)
T TIGR00896 289 W---AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHD 347 (355)
T ss_pred H---HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1345677888776655555555444 3 457999999887777777888877776654
No 177
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.44 E-value=2.1e-05 Score=77.29 Aligned_cols=118 Identities=11% Similarity=-0.092 Sum_probs=72.3
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+++++|++..+.+.+.....++.. ..++.|++.||+|+|+.+.++..+..++........ +.+..+....+.
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~ 302 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP-------SHAVSLFGITLI 302 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
Confidence 467889999888876555555554 478999999999999999999988888877665531 222222222333
Q ss_pred hhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 119 GNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
+.|.+..+.. ....+..| ++.|.+.++...+..+|+.+.+.+...+
T Consensus 303 ~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~ 350 (392)
T PRK10473 303 CAGFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVL 350 (392)
T ss_pred HHHHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333332222 22233445 3456666666555556666665555443
No 178
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.44 E-value=1.1e-05 Score=79.69 Aligned_cols=155 Identities=12% Similarity=0.071 Sum_probs=103.2
Q ss_pred cHHHHHHHcC-CChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH--
Q 016123 36 YSDALKTLMN-LTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM-- 111 (394)
Q Consensus 36 ~~~~l~~~~g-~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l-- 111 (394)
|.+.+-++.| .+....+...+...+.=+. -...+++..|+|.|+++.++.+...+=+.+++... ++.+..
T Consensus 229 f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~------~~~~~~~~ 302 (400)
T PF03825_consen 229 FFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS------DPWPFIVA 302 (400)
T ss_pred HHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc------CCcHHHHH
Confidence 3344455555 6666666543333333343 56889999999999999999998888777666531 122222
Q ss_pred --HHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHh-hhhhhHHHHHHHHHhhcCCC-------hhHHHHHHHH
Q 016123 112 --CVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKG-YVGLSTAIFTDLCSALFADD-------PAKFLFMLAI 180 (394)
Q Consensus 112 --~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~-~~glg~~i~~~i~~~~~~~~-------~~~~~~~~~~ 180 (394)
.+...+-|+..++...+....+.+..|+ .|+++.|+..+ ..|+|+.+.+.+...+++.. ...+..+.++
T Consensus 303 ~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~ 382 (400)
T PF03825_consen 303 LQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAV 382 (400)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH
Confidence 1234568888888888999999999996 59999999766 57999999999988888642 1223333444
Q ss_pred HHHHHHHhhhhccccc
Q 016123 181 VPFVVCLGAIFFLRET 196 (394)
Q Consensus 181 ~~~~v~~~~~~~~~~~ 196 (394)
+..++.++.+++.|++
T Consensus 383 ~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 383 MALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhhccCC
Confidence 4444444444444543
No 179
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.43 E-value=1.8e-06 Score=85.30 Aligned_cols=152 Identities=12% Similarity=0.052 Sum_probs=113.4
Q ss_pred HHHHHHcC----CChhhhHH-HHHHHHhhhhhhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 38 DALKTLMN----LTQLELNN-LSVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 38 ~~l~~~~g----~s~~~~~~-~~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
-++..+++ ++++++.- ++....+......++||+.|| .|+|+++..|++++.+|+++++... . .....+
T Consensus 46 ~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~--~~~~gl 120 (498)
T COG3104 46 LYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---V--SGPGGL 120 (498)
T ss_pred HHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---c--ccccHH
Confidence 33555555 99888766 444444444557899999999 6999999999999999999987531 0 134466
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhccc---CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~---~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
++...+.++|.|+.-......+.+.+|+ ||=.+.++...+..+|+.+.+.+...+-+...+..-+-++.+.....++
T Consensus 121 ~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~ 200 (498)
T COG3104 121 YIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLV 200 (498)
T ss_pred HHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 7776777799998877777888899973 4778888888899999888888877776665666666677766666666
Q ss_pred hhhccc
Q 016123 189 AIFFLR 194 (394)
Q Consensus 189 ~~~~~~ 194 (394)
..++.|
T Consensus 201 ~f~~~~ 206 (498)
T COG3104 201 IFLLGR 206 (498)
T ss_pred HHHHcc
Confidence 665555
No 180
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.40 E-value=2.9e-05 Score=76.76 Aligned_cols=59 Identities=19% Similarity=0.134 Sum_probs=42.4
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccC-chHHHHHHHHHHHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIP-APIILLIGSLEGLVGYGA 94 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G-~r~~~~~g~~~~~~g~~~ 94 (394)
|.+.+-++.|+|..|++.+.+...+..++ .++.|.+.||++ +|+.+.+..++.++....
T Consensus 24 ~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 24 YLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 34445677899999999987777777765 689999999986 456665655555554433
No 181
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.39 E-value=1.4e-05 Score=78.82 Aligned_cols=121 Identities=15% Similarity=-0.028 Sum_probs=87.7
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+++.+|.+..+.+++.....++... +++.+++.||+++|+++..+. +.++........ ++.+...+..++.
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-------~~~~~~~~~~~~~ 303 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQ-------HSLLPAYPLLILI 303 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHH-------hHHHHHHHHHHHH
Confidence 5778899999999977777777765 789999999999999888775 333333332221 2455455566677
Q ss_pred hhhhhhhhhhHHHHHHHhcccC--CCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 119 GNSTTWMNTAVLVTCIRNFRRN--RGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~~--RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
|++.+....+..+..++.-|++ +|.+.++.+....++..+...+......
T Consensus 304 G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~ 355 (393)
T PRK11195 304 GALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVK 355 (393)
T ss_pred HHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 8888776666666677766653 6999999999988888888877765543
No 182
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.39 E-value=1.3e-05 Score=81.00 Aligned_cols=130 Identities=15% Similarity=0.082 Sum_probs=94.2
Q ss_pred HHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCch--HHHHHHHHHHHH-HHHHHH-HHHHhccCCchHHHHH
Q 016123 38 DALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAP--IILLIGSLEGLV-GYGAQW-LVVSRKIQPLSYWQMC 112 (394)
Q Consensus 38 ~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r--~~~~~g~~~~~~-g~~~~~-~~~~~~~~~~~~~~l~ 112 (394)
..-++++|++..++..+.....+..+. +.+.|++.||+|+| +++.++.++..+ ....+. +. .......+.|.++
T Consensus 306 i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~-~~~~g~~~~~~f~ 384 (477)
T PF11700_consen 306 IYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFW-PSFFGLKSPWEFW 384 (477)
T ss_pred HHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhh-hcccCcccHHHHH
Confidence 335779999999988876666666654 78999999999999 888777776633 222211 11 1111113567888
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+..++.|+..|..+..+-++.++.-|+ +.+.-.|+.....-.++.+.|.++..+.+
T Consensus 385 ~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 385 VLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999888888899999995 78999999887666666666666665554
No 183
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.37 E-value=6e-06 Score=82.19 Aligned_cols=146 Identities=14% Similarity=0.101 Sum_probs=96.2
Q ss_pred ChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhh
Q 016123 47 TQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWM 125 (394)
Q Consensus 47 s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~ 125 (394)
+..+.+++.....++.+. .++.|++.||+|+|+++.++.++..+++....+.. .+.+.+++..++.|++.+..
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~ 328 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG------SNLPLILVLIILAGFGQNFV 328 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc------hhHHHHHHHHHHHHHHHHHH
Confidence 344555554444555544 78999999999999999999988888877665421 23455555666777777776
Q ss_pred hhhHHHHHHHhcc--------cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC-----C-------hhHHHHHHHHHHHHH
Q 016123 126 NTAVLVTCIRNFR--------RNRGPVSGILKGYVGLSTAIFTDLCSALFAD-----D-------PAKFLFMLAIVPFVV 185 (394)
Q Consensus 126 ~~~~~~~~~~~Fp--------~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-----~-------~~~~~~~~~~~~~~v 185 (394)
........++..| +++|.+.|+.+....+|..+.+.+...+++. + ....-.....+|.+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~ 408 (437)
T TIGR00792 329 TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALF 408 (437)
T ss_pred HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHH
Confidence 6666666665543 3479999999888888888888777766531 1 023344455566666
Q ss_pred HHhhhhccc-ccCC
Q 016123 186 CLGAIFFLR-ETTP 198 (394)
Q Consensus 186 ~~~~~~~~~-~~p~ 198 (394)
.+++.+++. ..|.
T Consensus 409 ~~~~~~~~~~~y~l 422 (437)
T TIGR00792 409 LLLAAIIIGRFYKL 422 (437)
T ss_pred HHHHHHHHHHHeeC
Confidence 666655553 4443
No 184
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=1.5e-05 Score=80.41 Aligned_cols=124 Identities=10% Similarity=-0.106 Sum_probs=79.5
Q ss_pred HHHHHcCCChhhhHHHHHHHHh-hhhhhhhhHhhhhc----cCchHHH-HHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 39 ALKTLMNLTQLELNNLSVVKDI-GKAFGLLAGLASDR----IPAPIIL-LIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 39 ~l~~~~g~s~~~~~~~~~~~~~-~~~~~~~~G~l~Dr----~G~r~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
.+.+..|++...++.+....-+ -.+.-|+.|.++|| +||||.. ++|.+.++++..+++... +.........++
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p-~~s~~~~~~y~~ 113 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP-DLSMNGKMIYAA 113 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC-CCCcchHHHHHH
Confidence 3578899999999985444433 34557999999997 6887655 467778887776654321 111111122233
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHH
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
+..++..++..+..++..+...+.-+ ++|....+.-..+..+|+.+.+.+.
T Consensus 114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~ 166 (460)
T PRK11462 114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLM 166 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566666666666666666665 5799999998888777766665443
No 185
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.34 E-value=8.9e-06 Score=91.15 Aligned_cols=132 Identities=13% Similarity=-0.056 Sum_probs=95.6
Q ss_pred cHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh------------
Q 016123 36 YSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR------------ 101 (394)
Q Consensus 36 ~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~------------ 101 (394)
+.|. +++.+|.+..+.+++.+...++.+. +++.|++.||.++++.+..+.++.+++.+.+.+....
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 4454 4667899999999977777777765 7899999999888887777766665555433321000
Q ss_pred -ccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 102 -KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 102 -~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.....+.|.+++..++.|++.++...+..+.+++.+|+ +||+++|+.+....+|..+.+.+...+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 00002455666667778888888777778888999985 6999999999988888888887776665
No 186
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.32 E-value=4.5e-06 Score=80.00 Aligned_cols=125 Identities=20% Similarity=0.111 Sum_probs=92.3
Q ss_pred cchhcHHHH-HHHcCCC-hhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchH
Q 016123 32 TFSNYSDAL-KTLMNLT-QLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSY 108 (394)
Q Consensus 32 ~~~~~~~~l-~~~~g~s-~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 108 (394)
.+..+.|.+ ++++|++ ..+.+.+.....+... ..++.|++.||+|+|+...+......++.......... .+.
T Consensus 224 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 299 (352)
T PF07690_consen 224 GFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS----SSP 299 (352)
T ss_dssp HHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH----CHH
T ss_pred HhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----hhH
Confidence 355667775 8899999 7888875555555554 58899999999999888888777776666554432111 123
Q ss_pred HHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHH
Q 016123 109 WQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFT 160 (394)
Q Consensus 109 ~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~ 160 (394)
+......++.|++.+..+........+.+| ++||++.|+.....++|+.+.|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 344445667788888877888888999998 5699999999999999988765
No 187
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.31 E-value=6.1e-06 Score=81.99 Aligned_cols=133 Identities=11% Similarity=0.050 Sum_probs=80.9
Q ss_pred cccchhcHHHHHHHc--CCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHH-HHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 30 NYTFSNYSDALKTLM--NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPII-LLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~--g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~-~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
.+.+..+.|++.+++ +.+..+.+.+.....++... .++.|++.||+++|+. +....++.++++.+. .. . .
T Consensus 258 ~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~-~~-~---~- 331 (412)
T TIGR02332 258 LSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLA-SA-T---D- 331 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHH-Hh-c---C-
Confidence 456667788876664 66777777766666666654 7899999999998775 344444444443222 11 1 1
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
.+... ....++.++|.............+.+| ++||++.|+.+....+|+++.+.+...+.+.
T Consensus 332 ~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~ 395 (412)
T TIGR02332 332 HNLIQ-LLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDA 395 (412)
T ss_pred CHHHH-HHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccccc
Confidence 12211 111122222322211222233346677 5799999999999999999999888777764
No 188
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.30 E-value=1.2e-05 Score=77.92 Aligned_cols=148 Identities=13% Similarity=0.103 Sum_probs=100.0
Q ss_pred HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
++++||+..++..+.....+..+ .+++.|+|.||+|.|+++.++.+++.+..+..-+. . ....+.++..+.|
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~--~-----~~~~f~i~gll~g 352 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFL--E-----GELDFWILGLLVG 352 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHc--c-----ccHHHHHHHHHHH
Confidence 56999999999998777777776 48999999999999999999998887655543322 1 1223445667788
Q ss_pred hhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC--CChhHHHHHHHHHHHHHHHhhhhccccc
Q 016123 120 NSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA--DDPAKFLFMLAIVPFVVCLGAIFFLRET 196 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 196 (394)
...|.....+=.+..|..|+ |-|...|+....--.++.+.+.+...+.+ ++.+.-+..+ ++...+.++..+.+|.+
T Consensus 353 ~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i-~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 353 TSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSI-IVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHH-HHHHHhhHhhEEeecCC
Confidence 88888887888899999995 68999999877544554444444443332 2323223332 23344445555555544
No 189
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.30 E-value=6.3e-05 Score=76.04 Aligned_cols=71 Identities=14% Similarity=0.228 Sum_probs=53.5
Q ss_pred chHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHH-HhCCCcc--hhhHHHHHHHHHHhhhhhccccchhc
Q 016123 323 HTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL-ALGYVDV--SIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 323 ~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~-~~G~~~~--a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.+++++.|.|+...+.++.++-.-....++.....+.+ .+|+++. ....-+..+.+++|-+++|++.||+|
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g 345 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFG 345 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 57788888898888888877765444455555555555 5788753 34555678999999999999999987
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.30 E-value=1.4e-05 Score=78.98 Aligned_cols=128 Identities=14% Similarity=-0.023 Sum_probs=86.1
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhh-hccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLAS-DRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMC 112 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~-Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~ 112 (394)
.+.|.+.++.+.++.+.+++.....++. ....+.+++. ||++.|+.+..+.++.+++..++... ++.+.+.
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~ 301 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------SNLQQLF 301 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------hhHHHHH
Confidence 3456654554446677777544443333 3444445554 56777877788888887777665443 2344444
Q ss_pred HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 113 VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 113 ~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
+..++.++|.+...+.....+.+..| ++||++.|+.....++|+.+.+.+...+.+.
T Consensus 302 ~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 302 TLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 45566677776665566677788888 5799999999999999999998888887754
No 191
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.28 E-value=3.4e-06 Score=81.68 Aligned_cols=121 Identities=21% Similarity=0.144 Sum_probs=77.5
Q ss_pred cchhcHHH-HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 32 ~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
.+..+.|. +++.+|++..+.+.+.....+... ..++.|++.||+|+|+.+..+......+..+........ .+.+
T Consensus 243 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 319 (366)
T TIGR00886 243 GVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSP---LSLA 319 (366)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCc---chHH
Confidence 34444444 467789999999876555555554 478999999999999988888777766665554321100 0333
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhh
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLS 155 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg 155 (394)
.......+.+++.|..+........+.+|++||.+.|+..+...+|
T Consensus 320 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 320 VFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 3322223333333444444556677788999999999988766554
No 192
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.25 E-value=6.3e-06 Score=80.92 Aligned_cols=128 Identities=11% Similarity=0.127 Sum_probs=101.1
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccC-CCc
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGP 143 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~ 143 (394)
..++.++.+|+|+|+.++++...+++=...++++ ++.+.+.+...+-|+-.++...+..+++++.||+| ..+
T Consensus 276 m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt 348 (412)
T PF01306_consen 276 MFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHH
T ss_pred HHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHH
Confidence 5689999999999999999999998877776654 46777888899999988888899999999999976 566
Q ss_pred hHHHH-HhhhhhhHHHHHHHHHhhcCCCh-hHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 144 VSGIL-KGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 144 a~gl~-~~~~glg~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
+-.+. +...++|..+++++...+.+.-+ ...++.++.+.....++..+.++..++.
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 66664 56789999999999999988644 4567778888888888888888766554
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.24 E-value=2.4e-05 Score=76.82 Aligned_cols=123 Identities=17% Similarity=0.073 Sum_probs=63.8
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHH--HHHHHHHH-HHHHhccCCchHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEG--LVGYGAQW-LVVSRKIQPLSYWQMCVFL 115 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~--~~g~~~~~-~~~~~~~~~~~~~~l~~~~ 115 (394)
++++-|+|.+|++.+.++..+..+ .+|+.|.+.||+|.||-++...... ..+-+..+ +...-+ .+. .+..
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~---~n~---~lg~ 107 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQ---SNF---WLGA 107 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHH---TT----HHHH
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH---HHHH
Confidence 567799999999997776666665 5899999999999877655433222 22222221 110000 121 2233
Q ss_pred HHHhhhhhhhhhhHHHHHH---HhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 116 CMGGNSTTWMNTAVLVTCI---RNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 116 ~l~G~g~g~~~~~~~~~~~---~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
++.|+-.++.+.+...... +-+.++.+.=-|=.-+.-++|.++.+.+...+++
T Consensus 108 iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~ 163 (412)
T PF01306_consen 108 IIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFAIASLLAGILFN 163 (412)
T ss_dssp HHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHHHHHHHhheeee
Confidence 3444444444433333322 2223344555555555556666666666665553
No 194
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.24 E-value=2.7e-05 Score=74.37 Aligned_cols=81 Identities=19% Similarity=0.157 Sum_probs=65.9
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
+-+++|++..|++.+...+..... ++++.|.+.||+|||+..++-.+++++..+... +++++.+.+.|++.
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~--------~~~~~~L~~GRvlg 131 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH--------SSNYPVLLLGRVLG 131 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh--------ccccHHHHHHHHHH
Confidence 445799999999997666666654 699999999999999999998888888776431 14688899999999
Q ss_pred hhhhhhhhhh
Q 016123 119 GNSTTWMNTA 128 (394)
Q Consensus 119 G~g~g~~~~~ 128 (394)
|++..+.+.+
T Consensus 132 GiaTSLLfS~ 141 (354)
T PF05631_consen 132 GIATSLLFSA 141 (354)
T ss_pred HHHHHHHHHH
Confidence 9999887653
No 195
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.23 E-value=1.1e-05 Score=77.95 Aligned_cols=132 Identities=14% Similarity=0.053 Sum_probs=79.3
Q ss_pred cchhcHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHH---HHHHHHHHHHHHhccCCc
Q 016123 32 TFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEG---LVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 32 ~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~---~~g~~~~~~~~~~~~~~~ 106 (394)
.+..+.|. +++++|++..+.+.+.....++... .++.|++.||...|+......... .++...... . +..
T Consensus 234 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~ 308 (379)
T TIGR00881 234 GILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL---N--PAA 308 (379)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc---C--cch
Confidence 33444555 4677899999998866666666654 789999999864333222222211 122221111 0 011
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
+.+...+..++.|...............+.+| ++||++.|+......+|+.+.+.+...+.+
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 33333344444554333333334456778898 469999999999999999988888777665
No 196
>PRK09848 glucuronide transporter; Provisional
Probab=98.23 E-value=1.2e-05 Score=80.80 Aligned_cols=153 Identities=19% Similarity=0.088 Sum_probs=101.1
Q ss_pred HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
++.+|.+.....+......++.. ..++.+++.||+|+|+++.+|.++..+++..+.+. . ..+.+.+++..++.|
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~--~---~~~~~~~~~~~~l~g 330 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV--S---VWSLPVALVALAIAS 330 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc--C---chhHHHHHHHHHHHH
Confidence 55677766544444443344444 47899999999999999999999888887766542 1 124565555667788
Q ss_pred hhhhhhhhhHHHHHHHhcc--------cCCCchHHHHHhhhhhhHHHHHHHHHhhcC-----CC---h----hHHHHHHH
Q 016123 120 NSTTWMNTAVLVTCIRNFR--------RNRGPVSGILKGYVGLSTAIFTDLCSALFA-----DD---P----AKFLFMLA 179 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp--------~~RG~a~gl~~~~~glg~~i~~~i~~~~~~-----~~---~----~~~~~~~~ 179 (394)
+|.+..........++.-| +++|...|+......+|.++.+.+...++. .+ . ...-....
T Consensus 331 ~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~~~~~~~~~~~~~~i~~~~~ 410 (448)
T PRK09848 331 IGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYIANQVQTPEVIMGIRTSIA 410 (448)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHHHHH
Confidence 8888776666666666554 135899999888888888887776655432 11 1 23344455
Q ss_pred HHHHHHHHhhhhcccccCC
Q 016123 180 IVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 180 ~~~~~v~~~~~~~~~~~p~ 198 (394)
.+|++..+++.++++..|-
T Consensus 411 ~~p~~~~~~~~~~~~~y~l 429 (448)
T PRK09848 411 LVPCGFMLLAFVIIWFYPL 429 (448)
T ss_pred HHHHHHHHHHHHHHHHeeC
Confidence 6677766666666654443
No 197
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.22 E-value=6.4e-05 Score=73.58 Aligned_cols=141 Identities=11% Similarity=0.056 Sum_probs=80.5
Q ss_pred ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccCc---hHHHHH-HHHHHHHHHHHHHHHHHhccC
Q 016123 29 NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIPA---PIILLI-GSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 29 ~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~---r~~~~~-g~~~~~~g~~~~~~~~~~~~~ 104 (394)
..|.+..+.|++-++.|++.. .+.......+... +..+++.||..| |+.... ..++.++........
T Consensus 207 ~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~--~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~------ 277 (368)
T TIGR00903 207 LFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGL--IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE------ 277 (368)
T ss_pred HHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHH--HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc------
Confidence 346666788888777888864 4443332222222 234677777654 343332 333333333332211
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHH
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAI 180 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~ 180 (394)
.+.+...+...+.++.....+.......++.+|+ .||+++|+......+|+...+++...++. +....+.+.++
T Consensus 278 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~-~~~~~f~~~~~ 352 (368)
T TIGR00903 278 -LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS-SAEAYFTFLAI 352 (368)
T ss_pred -cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHH
Confidence 1222223333445554444444455678899996 69999999999889999888888877763 33344444443
No 198
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.17 E-value=5.7e-05 Score=69.62 Aligned_cols=149 Identities=13% Similarity=0.116 Sum_probs=101.3
Q ss_pred CCcHHHHHHHHHHHHHhcccccchhcHHHHHHHcCCChhhhHHH-HHHHHhhhhhhhhhHhhhhccCchHHHHHHHHHHH
Q 016123 11 AGKWLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGL 89 (394)
Q Consensus 11 ~~~w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~ 89 (394)
..-|++++.+++-....-..++.+- --++++||+|+.+.+.+ ++...+....+|+.|.+.||+|++...+.+..+..
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~t 341 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILT 341 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHH
Confidence 3458777777665433222232221 12689999999999885 55555555679999999999999998877766554
Q ss_pred -HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 90 -VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 90 -~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++.....+.. +.=+....+.|++..+.-.+.+..++..-|+ +-|++-|..+.-..+|-++.+.+...+.
T Consensus 342 l~~H~~l~Ft~---------lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~ 412 (459)
T KOG4686|consen 342 LLGHSGLFFTF---------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIA 412 (459)
T ss_pred HHHhhhHHhhh---------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheee
Confidence 4555444332 1123345566776665544456778888896 6999999999999999888887776666
Q ss_pred CCC
Q 016123 168 ADD 170 (394)
Q Consensus 168 ~~~ 170 (394)
+++
T Consensus 413 d~~ 415 (459)
T KOG4686|consen 413 DGD 415 (459)
T ss_pred cCC
Confidence 553
No 199
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.17 E-value=4.9e-05 Score=75.87 Aligned_cols=187 Identities=14% Similarity=0.131 Sum_probs=117.8
Q ss_pred CCCcHHHHHHHHHHHHHhccccc-c-hhcHHHHHH-HcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCc-hHHHHHH
Q 016123 10 SAGKWLGFVTAVWVQAISGNNYT-F-SNYSDALKT-LMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPA-PIILLIG 84 (394)
Q Consensus 10 ~~~~w~~l~~~~~~~~~~g~~y~-~-~~~~~~l~~-~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~-r~~~~~g 84 (394)
.+.+|+.+..+.+.++..+..++ + ...-|++++ +.+-+.+..|++..+..++.. .++..|+...|.+. |+.++.|
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 45788877777766655443221 1 122243433 366777788887777777775 58999999999886 8888899
Q ss_pred HHHHHHHHHHH-HHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHH-HhcccCCCchHHHHHhhhhhhHHHHHHH
Q 016123 85 SLEGLVGYGAQ-WLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCI-RNFRRNRGPVSGILKGYVGLSTAIFTDL 162 (394)
Q Consensus 85 ~~~~~~g~~~~-~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~-~~Fp~~RG~a~gl~~~~~glg~~i~~~i 162 (394)
.+...+|.++. ++... ++...|.+.+.|++.|+|.+..- ..=++++ ...+++|-+|.+....++-+|..+++.+
T Consensus 109 ~ii~~~g~llY~~l~~~---~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~ 184 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYV---PNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTI 184 (488)
T ss_pred HHHHHHHHHHHHHHHhc---ccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHH
Confidence 99999999887 33322 21246667779999999977542 2333333 5678888888888888777776665544
Q ss_pred HHhhcC---C----------ChhH-HHHHHHHHHHHHHHhhhhcccccCCCC
Q 016123 163 CSALFA---D----------DPAK-FLFMLAIVPFVVCLGAIFFLRETTPAS 200 (394)
Q Consensus 163 ~~~~~~---~----------~~~~-~~~~~~~~~~~v~~~~~~~~~~~p~~~ 200 (394)
...+-+ . |.-+ -.++.+++..+-.+...++++|.++..
T Consensus 185 q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 185 QLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 333221 1 1111 233333444444455566677777654
No 200
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=5.2e-05 Score=77.60 Aligned_cols=153 Identities=14% Similarity=0.059 Sum_probs=95.4
Q ss_pred HhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 016123 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 26 ~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
+.|.. ....|.+.+-+..|.+... .+.+....+... ...++..+.||+|||++++.|...+.++.++++........
T Consensus 308 ~tG~~-~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~ 385 (513)
T KOG0254|consen 308 LTGIN-YVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALY 385 (513)
T ss_pred HhCCc-eEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhcc
Confidence 44443 4456778887777777543 222222223333 35677899999999999999999999998888765432110
Q ss_pred ------CchHHHHH-HHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCC--hhHH
Q 016123 105 ------PLSYWQMC-VFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADD--PAKF 174 (394)
Q Consensus 105 ------~~~~~~l~-~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~--~~~~ 174 (394)
......+. ...++..+..++. ..+....+|.||. -|+++.++..+...+.+.+....+....+.. ...+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~v~~f~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f 464 (513)
T KOG0254|consen 386 YPNSSKGAGWLAIVFLCLFIFSFAIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTF 464 (513)
T ss_pred CCCcccchhHHHHHHHHHHHHHHhcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 00111111 2333444444443 3455688999995 5999999999998888887766665555442 3344
Q ss_pred HHHHHHH
Q 016123 175 LFMLAIV 181 (394)
Q Consensus 175 ~~~~~~~ 181 (394)
..+.++.
T Consensus 465 ~~f~~~~ 471 (513)
T KOG0254|consen 465 GYFGGIC 471 (513)
T ss_pred HHHHHHH
Confidence 4444433
No 201
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.11 E-value=2.7e-05 Score=79.15 Aligned_cols=136 Identities=7% Similarity=-0.022 Sum_probs=94.5
Q ss_pred hhhhhhHhhhhccCchH-------HHHHHHHHHHHHHHHHHHH---HHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHH
Q 016123 63 AFGLLAGLASDRIPAPI-------ILLIGSLEGLVGYGAQWLV---VSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVT 132 (394)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~-------~~~~g~~~~~~g~~~~~~~---~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~ 132 (394)
+++|+.|++.||+++|+ -+.+|.++.+++++..+.. ........++|.+....++.|+|.++..++....
T Consensus 324 i~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~ 403 (489)
T PRK10207 324 VASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAM 403 (489)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 45888999999999997 3777888888777654321 1111011346666667788899999988888899
Q ss_pred HHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcC-C----------ChhHHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 133 CIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFA-D----------DPAKFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 133 ~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~-~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
+.+..|+ .+|.++|+.....++|+.+...+.+..-. . +...++..+++...+++++..+..|...+
T Consensus 404 ~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~ 481 (489)
T PRK10207 404 IAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNR 481 (489)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999996 59999999999999999988877654421 0 12456666666666666655554444333
No 202
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.10 E-value=0.00019 Score=71.36 Aligned_cols=166 Identities=10% Similarity=0.028 Sum_probs=88.1
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCch
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLS 107 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 107 (394)
.+.+..+.|.+ ++.+|++..+.++.......+... +.+.+++.+|.+.++....+..+..+|..+....... .+ ++
T Consensus 234 ~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~-~~-~~ 311 (413)
T PRK15403 234 MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLL-WP-HV 311 (413)
T ss_pred HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHH-cc-cc
Confidence 34555566654 667799999999865544455544 6777777655444444433333444444433322100 01 23
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc--CCCchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHH
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFV 184 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~ 184 (394)
++..++..++.++|.+...+.... ..++++ .+|++.++.......+..+.+.....+.+. ....+.....+...+
T Consensus 312 ~~~~~~~~~l~~~G~~~~~p~~~~--~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 312 WLWSVLGTSLYAFGIGLIFPTLFR--FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHH--HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 333344566677777765433332 235543 489999988877766666666666555443 223333333333333
Q ss_pred HHHhhhhcccccCCC
Q 016123 185 VCLGAIFFLRETTPA 199 (394)
Q Consensus 185 v~~~~~~~~~~~p~~ 199 (394)
.........|.+|.+
T Consensus 390 ~~~~~~~~~~~~~~~ 404 (413)
T PRK15403 390 VVFTLAGLLNRVRQH 404 (413)
T ss_pred HHHHHHHHHhhhhhh
Confidence 333333444444443
No 203
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.10 E-value=5.6e-07 Score=92.16 Aligned_cols=125 Identities=21% Similarity=0.101 Sum_probs=2.7
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHH--Hh-------c--
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVV--SR-------K-- 102 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~--~~-------~-- 102 (394)
.-.+.++++|+++.++.+++.+...++..+ .++..++.+|..|-+.+-+|.+++++|.+++++=. .+ .
T Consensus 24 ~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~ 103 (539)
T PF03137_consen 24 SSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNS 103 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccc
Confidence 345679999999999999999999999865 77888999988888888899999999998876410 00 0
Q ss_pred ------------------------------cCCch--HHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHH
Q 016123 103 ------------------------------IQPLS--YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILK 149 (394)
Q Consensus 103 ------------------------------~~~~~--~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~ 149 (394)
..+.+ ++.+++..++.|+|....|+...+++=++-++ +-+.-.|+..
T Consensus 104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~ 183 (539)
T PF03137_consen 104 NGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILY 183 (539)
T ss_dssp ------------------------------------------------SSS-----------------------------
T ss_pred ccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhh
Confidence 00001 22334567888888888888888888888864 5777777777
Q ss_pred hhhhhhHHHH
Q 016123 150 GYVGLSTAIF 159 (394)
Q Consensus 150 ~~~glg~~i~ 159 (394)
+...+|.++.
T Consensus 184 ~~~~lGPa~G 193 (539)
T PF03137_consen 184 AMSILGPALG 193 (539)
T ss_dssp ----------
T ss_pred HHhhccHHHH
Confidence 7666665544
No 204
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.04 E-value=1.1e-05 Score=76.88 Aligned_cols=126 Identities=10% Similarity=-0.000 Sum_probs=85.4
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCc
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGP 143 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~ 143 (394)
.++.++++||+|||++|....+++++..++...+.... .-..+++.+|++...+ +.+.+.+..+.||. -|++
T Consensus 398 lLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn---~~tvllf~arafisg~----fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 398 LLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN---AYTVLLFTARAFISGA----FQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc---hhHHHHHHHHHHHhch----heEEEEecCcccchhhhhc
Confidence 57899999999999999999999988887776553211 0122344566654333 33445677899996 5999
Q ss_pred hHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 144 VSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 144 a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
++|......-+|+.+.|.+. +..+.......++-....+++.++.+++|..++.
T Consensus 471 gvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 99999999999988877766 3333223333444444556666777777766543
No 205
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.03 E-value=8.7e-05 Score=74.03 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=100.9
Q ss_pred HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
+..+|.+ ...+.+.....+... ..++.+++.||+|+|+++..+.++.+++.+...+... ++.+.+++..++.|
T Consensus 253 ~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~l~g 326 (428)
T PF13347_consen 253 TYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLILFILAG 326 (428)
T ss_pred HHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhH
Confidence 4445555 445555555555555 4789999999999999999999999999988776521 25677778888899
Q ss_pred hhhhhhhhhHHHHHHHhcc--------cCCCchHHHHHhhhhhhHHHHHHHHHhhcC-----CC--------hhHHHHHH
Q 016123 120 NSTTWMNTAVLVTCIRNFR--------RNRGPVSGILKGYVGLSTAIFTDLCSALFA-----DD--------PAKFLFML 178 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp--------~~RG~a~gl~~~~~glg~~i~~~i~~~~~~-----~~--------~~~~~~~~ 178 (394)
++.+..+.....+.++..+ ++.|...|+.....-++..+.+.+...+++ .+ ....-...
T Consensus 327 i~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~~~q~~~~~~~i~~~~ 406 (428)
T PF13347_consen 327 IGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYDANAAVQSASALSGIRILF 406 (428)
T ss_pred hhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHH
Confidence 9998877777777777664 224777777766666666665555544432 11 12344555
Q ss_pred HHHHHHHHHhhhhcccccC
Q 016123 179 AIVPFVVCLGAIFFLRETT 197 (394)
Q Consensus 179 ~~~~~~v~~~~~~~~~~~p 197 (394)
..+|++..+++..+++..|
T Consensus 407 ~~~p~~~~~~~~i~~~~y~ 425 (428)
T PF13347_consen 407 SIVPAIFLLLAIIFMRFYP 425 (428)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 5566666666665555444
No 206
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.92 E-value=0.00088 Score=65.74 Aligned_cols=157 Identities=15% Similarity=0.058 Sum_probs=99.3
Q ss_pred hhcHHHHHHH-cCCChhhhHH-HHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH
Q 016123 34 SNYSDALKTL-MNLTQLELNN-LSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQ 110 (394)
Q Consensus 34 ~~~~~~l~~~-~g~s~~~~~~-~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 110 (394)
+...|.+.+. .|++..|+.- +.-...-..+ +.++...+.|..|.|++++++.+...+.+.++-+. ++++.
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~-------~sv~~ 96 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG-------TSVLA 96 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-------CcHHH
Confidence 3455666665 8999999986 4322222223 36789999999999999999999888877776543 46666
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHHHHHHH
Q 016123 111 MCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFVVCL 187 (394)
Q Consensus 111 l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~v~~ 187 (394)
+-+.-+.-|++.+. .++....+=..-| ++--++++...+..-+|-++.+.+.+.++.. ..-..+..+......+++
T Consensus 97 mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 97 MQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 66666777766654 2334444433334 4556677777777767777777776666542 223334444555555555
Q ss_pred hhhhcccccCC
Q 016123 188 GAIFFLRETTP 198 (394)
Q Consensus 188 ~~~~~~~~~p~ 198 (394)
+..+++|.+++
T Consensus 176 ~~~~fLP~~~~ 186 (412)
T PF01770_consen 176 LIALFLPMPKR 186 (412)
T ss_pred HHHHHcCCCCc
Confidence 55555555444
No 207
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.88 E-value=7.8e-05 Score=75.44 Aligned_cols=154 Identities=12% Similarity=-0.029 Sum_probs=105.4
Q ss_pred HHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhc---cCCchHHHHHHHHHH
Q 016123 42 TLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRK---IQPLSYWQMCVFLCM 117 (394)
Q Consensus 42 ~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~---~~~~~~~~l~~~~~l 117 (394)
+.+|+++.+.+.+.....++.+. ....+++.+|++.|+++.++.++.+++........... ..-++.+.+....++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 56899999999966656666654 78999999999999999999999988775532111000 000122222334567
Q ss_pred HhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCC------Ch--hHHHHHHHHHHHHHHHh
Q 016123 118 GGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFAD------DP--AKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~------~~--~~~~~~~~~~~~~v~~~ 188 (394)
.+++.++.+.+....+++.-|+ ++|+..++..+..++|..+.+.+...+.+. +. ......++.++.++.+.
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~ 440 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLP 440 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 7778888888888999999985 699999999999999988888654444321 11 22344444555555555
Q ss_pred hhhcccc
Q 016123 189 AIFFLRE 195 (394)
Q Consensus 189 ~~~~~~~ 195 (394)
..+++|+
T Consensus 441 ~~~llP~ 447 (468)
T TIGR00788 441 LLHLLPR 447 (468)
T ss_pred HHHhCCC
Confidence 5566665
No 208
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.85 E-value=0.00012 Score=74.44 Aligned_cols=158 Identities=13% Similarity=0.185 Sum_probs=108.5
Q ss_pred ccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 31 YTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 31 y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
+...++.|.+.+.++.+..+.+.+.+...+.... -++.|++.|+...|+..+....+...|...+..... .+++
T Consensus 315 ~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~-----~~~~ 389 (509)
T KOG2504|consen 315 NVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFA-----TTYV 389 (509)
T ss_pred HHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHh-----ccHH
Confidence 3455678888889999999999966665566555 689999999999655444444444444333322221 4678
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFVVC 186 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~v~ 186 (394)
.+..+.++.|+..|....-...++.+..+ ++-..+.|+.....+++..+.+|+...+.+. +....+.+.++. .+++
T Consensus 390 ~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~-~~~s 468 (509)
T KOG2504|consen 390 GLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLC-FLLS 468 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChH-HHHH
Confidence 88888888888888765444457778887 6789999999999999999999999977664 333344444443 3334
Q ss_pred Hhhhhccc
Q 016123 187 LGAIFFLR 194 (394)
Q Consensus 187 ~~~~~~~~ 194 (394)
..++++++
T Consensus 469 ~~~~~~~~ 476 (509)
T KOG2504|consen 469 AVLLLILR 476 (509)
T ss_pred HHHHHHhH
Confidence 44444444
No 209
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.84 E-value=0.00033 Score=71.48 Aligned_cols=128 Identities=12% Similarity=0.015 Sum_probs=90.0
Q ss_pred hhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCc
Q 016123 67 LAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKI--QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGP 143 (394)
Q Consensus 67 ~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~--~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~ 143 (394)
..+++.||+++++.+.+|.++.++|++.......... ...+.+++....++.|+|..+..+.....+.+.-|+ .||+
T Consensus 339 ~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~ 418 (500)
T PRK09584 339 IYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGF 418 (500)
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHH
Confidence 4477788888889999999999999988766532100 012355566678889999999888888899999996 6999
Q ss_pred hHHHHHhhhhhhHHHHHHHHHhhc-C----C------ChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 144 VSGILKGYVGLSTAIFTDLCSALF-A----D------DPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 144 a~gl~~~~~glg~~i~~~i~~~~~-~----~------~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
++|+......+|+.+...+....- + + ....++..++++..+++++.....|
T Consensus 419 ~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 419 IMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888888877765321 1 0 1345666666665555544444433
No 210
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.83 E-value=0.0017 Score=63.20 Aligned_cols=130 Identities=12% Similarity=0.041 Sum_probs=88.9
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccC-----chHHHHH-HHHHHHHHHHHHHHHHHhccC-------Cc
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLI-GSLEGLVGYGAQWLVVSRKIQ-------PL 106 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~-g~~~~~~g~~~~~~~~~~~~~-------~~ 106 (394)
+..|++++..-.+.....-.+...+-+..|..+|+.+ ||...++ |.++.+.|..+..++...... ..
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 5678888887777655555555556789999999999 7776554 555555555554443211110 11
Q ss_pred hHHHHH--HHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 107 SYWQMC--VFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 107 ~~~~l~--~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
..+... +...+.|+|.+...++....+.+.-| ++|+++.++.-...=+|..+.+.+...++++
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~ 151 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP 151 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 233222 34567888888888888899998887 5899999999888777777777777777653
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=97.83 E-value=0.00037 Score=69.81 Aligned_cols=140 Identities=13% Similarity=0.078 Sum_probs=83.7
Q ss_pred HHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHH
Q 016123 54 LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVT 132 (394)
Q Consensus 54 ~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~ 132 (394)
+.....+..+. .++.+++.||+|+|+....+.+...++.....+. . ..+.+.+++..++.|++.+........+
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI--P---PSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--C---cchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444 6788999999999999998877666543332221 1 1345556666678888888777777777
Q ss_pred HHHhcc-------c-CCCchHHHHHhhhhhhHHHHHHHHHhhcC------C---Ch----hHHHHHHHHHHHHHHHhhhh
Q 016123 133 CIRNFR-------R-NRGPVSGILKGYVGLSTAIFTDLCSALFA------D---DP----AKFLFMLAIVPFVVCLGAIF 191 (394)
Q Consensus 133 ~~~~Fp-------~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~------~---~~----~~~~~~~~~~~~~v~~~~~~ 191 (394)
+++..+ + +.|...|+......+|.++.+.+...+++ + .. ...-.....+|++..+++.+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~~~~~~q~~~~~~~i~~~~~~~p~~~~~~~~~ 423 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYVGGAAVQSASVLTTINLLFTVIPGVLFAGMAI 423 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777664 1 23556666654445555555444444331 1 11 23345556677777777776
Q ss_pred cccccCC
Q 016123 192 FLRETTP 198 (394)
Q Consensus 192 ~~~~~p~ 198 (394)
++...|-
T Consensus 424 ~~~~y~l 430 (444)
T PRK09669 424 ILNFYKL 430 (444)
T ss_pred HHHhccC
Confidence 6655553
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.77 E-value=0.0004 Score=70.28 Aligned_cols=119 Identities=8% Similarity=-0.058 Sum_probs=72.7
Q ss_pred ChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhh
Q 016123 47 TQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWM 125 (394)
Q Consensus 47 s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~ 125 (394)
+....+.+.....+..+ ..++.+++.||+|+|+++.++.++..++.+....... .+..+.+.+.+..++.|++.+..
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~g~~~~~~ 341 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGL--AAPHNALLIVIAGILLNIGTALF 341 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc--cCchhHHHHHHHHHHHHHHHHHH
Confidence 34444444444434444 4788999999999999999888877666655433210 01124555555667777888777
Q ss_pred hhhHHHHHHHhcc-------c-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 126 NTAVLVTCIRNFR-------R-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 126 ~~~~~~~~~~~Fp-------~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
......++++.-+ + +.|...|......-+|.++.+.+...++
T Consensus 342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677776633 1 2355677766655566666555554443
No 213
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.73 E-value=0.00054 Score=66.72 Aligned_cols=72 Identities=18% Similarity=0.209 Sum_probs=51.8
Q ss_pred cchHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHH-HhCCCcch--hhHHHHHHHHHHhhhhhccccchhc
Q 016123 322 DHTIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGL-ALGYVDVS--IFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 322 ~~t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~-~~G~~~~a--~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
..|+||..+.++.-+..++.++..-....++.-.+.++. ++|.++.. .+....++....|-++.|++.||++
T Consensus 242 ~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg 316 (438)
T COG2270 242 KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFG 316 (438)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 357888888887776666666554444455555566666 67877533 5666678899999999999999986
No 214
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.72 E-value=0.00064 Score=68.91 Aligned_cols=127 Identities=9% Similarity=-0.038 Sum_probs=90.5
Q ss_pred hHhhhhc-cCchHHH--HHHHHHHHHHHHHHHHHHH--hccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CC
Q 016123 68 AGLASDR-IPAPIIL--LIGSLEGLVGYGAQWLVVS--RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR 141 (394)
Q Consensus 68 ~G~l~Dr-~G~r~~~--~~g~~~~~~g~~~~~~~~~--~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R 141 (394)
..++.|| .+++... .+|.++.++++..+.+... +.....++|++....++.++|..+..+.......+.-|+ .|
T Consensus 336 ~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~ 415 (475)
T TIGR00924 336 WTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLM 415 (475)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHH
Confidence 3455665 4455544 7889888888887764311 000013677777788899999998888888889999986 69
Q ss_pred CchHHHHHhhhhhhHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 142 GPVSGILKGYVGLSTAIFTDLCSALFAD-DPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 142 G~a~gl~~~~~glg~~i~~~i~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
|+.+|+.....++|..+.+.+....... +...++..+++...++.++..++.|
T Consensus 416 g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 416 GQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998887765443 3455667777666666666655444
No 215
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.00057 Score=66.54 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=83.0
Q ss_pred cccchhcHHH-HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhcc--CchHHHH-HHHHHHHHHHHHHHHHHHhccC
Q 016123 30 NYTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRI--PAPIILL-IGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 30 ~y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~--G~r~~~~-~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
.|+..-+.|- +.|+.|+|..+.++..+..-++.+. ++++|+++||+ |+|..+- +..+...++...++.. +
T Consensus 268 R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-----~ 342 (448)
T COG2271 268 RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-----P 342 (448)
T ss_pred HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-----C
Confidence 3444455554 5788999999999977777777765 78999999995 6776554 3344444555544432 1
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccC-CCchHHHHHhhhhh-hHHHHHHHHHhhcCC
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGL-STAIFTDLCSALFAD 169 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~~gl-g~~i~~~i~~~~~~~ 169 (394)
+.++++..+..++.|+-.-.-....-....+.-||+ -|+|.|+.-.+..+ |++........+.+.
T Consensus 343 ~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 343 NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 134555555555555433211111112334555875 99999999888888 555555555445454
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.59 E-value=0.0012 Score=66.22 Aligned_cols=158 Identities=22% Similarity=0.251 Sum_probs=107.3
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhhccC-----chHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASDRIP-----APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYW 109 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G-----~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~ 109 (394)
...+.+++++|++++|...+.....+....-|+.|.+.|-+. ||+-++++.++..++...++... ... .+..
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~-~~~--~s~~ 87 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLP-ASE--SSAA 87 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcc-ccc--chhh
Confidence 345668999999999999988877777788999999999974 55566777777766555554431 111 2344
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHhc---ccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCC-hhHHHHHHHHHHHHH
Q 016123 110 QMCVFLCMGGNSTTWMNTAVLVTCIRNF---RRNRGPVSGILKGYVGLSTAIFTDLCSALFADD-PAKFLFMLAIVPFVV 185 (394)
Q Consensus 110 ~l~~~~~l~G~g~g~~~~~~~~~~~~~F---p~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~v 185 (394)
...++.++..+|..+.++.+=....|.- |+.||...+.......+|+.+...+...+.+.. ....+.+.+.++.+.
T Consensus 88 ~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~ 167 (433)
T PF03092_consen 88 IAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM 167 (433)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence 4445566777888888877766666554 445778788877788888888877776666543 333444445556655
Q ss_pred HHhhhhcccc
Q 016123 186 CLGAIFFLRE 195 (394)
Q Consensus 186 ~~~~~~~~~~ 195 (394)
.+...++.++
T Consensus 168 ~~~~~~~~~e 177 (433)
T PF03092_consen 168 LIVALFLLEE 177 (433)
T ss_pred HHHHHHhhhh
Confidence 5555555554
No 217
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.56 E-value=0.0026 Score=63.21 Aligned_cols=125 Identities=8% Similarity=0.009 Sum_probs=78.7
Q ss_pred hcHHHHHHHc--CCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 35 NYSDALKTLM--NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 35 ~~~~~l~~~~--g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
.+.+.+.++. +.+....+............ -+++|++.||+++|+++.+..+...+..++.... ++...+
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-------~~~~~~ 325 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-------GGHVGL 325 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-------CChHHH
Confidence 4445544443 44443333332222333333 6889999999999999888887777776665432 122222
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
...++.|+..+..++.......+.++++...+.+...++. +|++++|++...+.+
T Consensus 326 -~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 326 -YCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH-hccchHHHHHHHHHH
Confidence 2334455666666777777888999887655444444443 999999999988876
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.0041 Score=59.55 Aligned_cols=154 Identities=17% Similarity=0.091 Sum_probs=98.3
Q ss_pred ccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q 016123 29 NNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQPL 106 (394)
Q Consensus 29 ~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 106 (394)
..|+.--+.|++-.|.|+|..+.++..+...+... .++..-.+.+| -..|+.......++.+|+..+.+... .
T Consensus 223 ~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~-----~ 297 (395)
T COG2807 223 LYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG-----Q 297 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----h
Confidence 45777778999999999999999986555555554 46666667774 56677777777788888888776521 1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc--CCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVP 182 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~ 182 (394)
.++. ..++.|+|.|..+..+...+..-.++ +-+.-.|..+..-.+=++..|.+...+.+. ++..-...+....
T Consensus 298 ~~~l---w~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 298 LPIL---WALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred HHHH---HHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 2221 24788999988887777777766643 455566666555444455666666666653 3333333333334
Q ss_pred HHHHHhhh
Q 016123 183 FVVCLGAI 190 (394)
Q Consensus 183 ~~v~~~~~ 190 (394)
.++.+.+.
T Consensus 375 i~m~i~Gl 382 (395)
T COG2807 375 LLMLIFGL 382 (395)
T ss_pred HHHHHHHh
Confidence 44444443
No 219
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.48 E-value=0.0018 Score=59.43 Aligned_cols=121 Identities=21% Similarity=0.141 Sum_probs=84.2
Q ss_pred hcHHHHHHHcCCCh--hhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Q 016123 35 NYSDALKTLMNLTQ--LELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQM 111 (394)
Q Consensus 35 ~~~~~l~~~~g~s~--~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l 111 (394)
...+.+.++++.+. .+.++......++... .++.|++.||+|+|+.+..+......+.....+... ...+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 97 (338)
T COG0477 23 PALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN-----VGLALL 97 (338)
T ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc-----chHHHH
Confidence 34555666666665 3666665555666654 589999999999998888888765555444333210 136667
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhccc--CCCchHHHHHhh-hhhhHHHHH
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR--NRGPVSGILKGY-VGLSTAIFT 160 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~--~RG~a~gl~~~~-~glg~~i~~ 160 (394)
.+.++..|++.+..+........+++|+ +|+...+..... ..+|..+.+
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888887777888889999996 789988888874 545555544
No 220
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.44 E-value=0.0028 Score=66.57 Aligned_cols=133 Identities=12% Similarity=-0.029 Sum_probs=90.7
Q ss_pred hcHHHHHHHcCCChhhhHHH-HHHHHhhhhhhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRKIQP-LSYWQM 111 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~~~l 111 (394)
++...+.+.+|++.++...+ .....+..+...++|++.|+ +|++++++++.++..+|+.+.+......... ......
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 34455677899999888774 44444444568899999998 8999999999999999998876531110000 011223
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHHHhccc----CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 112 CVFLCMGGNSTTWMNTAVLVTCIRNFRR----NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 112 ~~~~~l~G~g~g~~~~~~~~~~~~~Fp~----~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++...+..+|.|..-.+..+...+-|++ +|-....+...+..+|+.+.+++...+-
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677777666666777788863 2556677777777888888777776654
No 221
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.31 E-value=2.8e-06 Score=85.08 Aligned_cols=164 Identities=18% Similarity=0.079 Sum_probs=97.3
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHH---HHHHhccCCch
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQW---LVVSRKIQPLS 107 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~---~~~~~~~~~~~ 107 (394)
....|.+.+.+..+.+... .......+... ..+++..+.||+|||++++.+....++....++ ....+.....+
T Consensus 271 ~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNSF--LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445667777777777661 11121222222 356777999999999999999988887776664 11111000001
Q ss_pred HHHHHH-HHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhcCCCh-hHHHHHHHHHHHH
Q 016123 108 YWQMCV-FLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFV 184 (394)
Q Consensus 108 ~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~ 184 (394)
...+.. .....+.+.+.. ........|.||. .|+++.|+......+++++.+.+...+.+... +..+...+++..+
T Consensus 349 ~~~i~~~~l~~~~~~~g~~-~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWG-PLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred cccceeeeecccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 222221 112222232332 3445677999995 69999999999888888888777766665433 4555555555555
Q ss_pred HHHhhhhcccccCC
Q 016123 185 VCLGAIFFLRETTP 198 (394)
Q Consensus 185 v~~~~~~~~~~~p~ 198 (394)
..+...+++||...
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 55566666665443
No 222
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.00049 Score=67.63 Aligned_cols=182 Identities=8% Similarity=-0.021 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHH-hcccccchhcHHHHHHHcCCChhhhHH-----HHHHHH----hhhhh-hhhhHhhhhccCchHHHHH
Q 016123 15 LGFVTAVWVQAI-SGNNYTFSNYSDALKTLMNLTQLELNN-----LSVVKD----IGKAF-GLLAGLASDRIPAPIILLI 83 (394)
Q Consensus 15 ~~l~~~~~~~~~-~g~~y~~~~~~~~l~~~~g~s~~~~~~-----~~~~~~----~~~~~-~~~~G~l~Dr~G~r~~~~~ 83 (394)
..+++.+...+. .-..|..+++...+-+..++.+.+... ...... ++.+- .++...++|+.|||++.+-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 445555555443 345789999999999888888765544 111111 12221 3567789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCchHHHHH-HHHHHHhhhhhhhhhhHHHHHHHhcccC-CCchHHHHHhhhhhhHHHHHH
Q 016123 84 GSLEGLVGYGAQWLVVSRKIQPLSYWQMC-VFLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTD 161 (394)
Q Consensus 84 g~~~~~~g~~~~~~~~~~~~~~~~~~~l~-~~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~~glg~~i~~~ 161 (394)
|.+++++-++..+....+.........++ +..++.-+|=+ .......++.||.+ ||+.-|+..+.-=+|+.+...
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999888777765443211111122223 23344444433 23345668999965 999999999888888888887
Q ss_pred HHHhhcCC-----ChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 162 LCSALFAD-----DPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 162 i~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
.+....+. ..-+..+.+...+.....+..+++|+..+.
T Consensus 461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGK 503 (538)
T ss_pred HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeeccccc
Confidence 77776652 222333344444444455555556644443
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.0039 Score=62.29 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=82.6
Q ss_pred HHHHcCCChhhhHHHHH-HHHhhhhhhhhhHhhhhc----cCchHH-HHHHHHHHHHHHHHHHHHHHhccCCchHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSV-VKDIGKAFGLLAGLASDR----IPAPII-LLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCV 113 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~-~~~~~~~~~~~~G~l~Dr----~G~r~~-~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
+.+.+|++...++.+.. .-.+-++.-|+.|.+.|| +||||. ++.|.+..++.+.+++.... .....+....++
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~-~~~~~k~~ya~v 117 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD-FSMTGKLIYALV 117 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC-cccCcchHHHHH
Confidence 57889999999988543 333344557999999998 666654 55676778777777654321 000112333344
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhc--ccCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNF--RRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~F--p~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
-..+.+++......+..+...+.= |++|-...+.-+.+..+|..+...+...+
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777666666666665 45799999998888888877665544433
No 224
>PRK11462 putative transporter; Provisional
Probab=97.27 E-value=0.0098 Score=60.06 Aligned_cols=141 Identities=15% Similarity=0.029 Sum_probs=68.8
Q ss_pred HHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHH
Q 016123 52 NNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVL 130 (394)
Q Consensus 52 ~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~ 130 (394)
+.+.....+..+ ..++++++.||+|.|++...+..+..+......+. . ..+.+.+++..++.|++.+.......
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~l~g~~~~~~~~l~~ 340 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFV--P---MQASITMFVFIFVIGVLHQLVTPIQW 340 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh--c---hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334334444444 36889999999999998776655444433333221 1 12232333334455655554433333
Q ss_pred HHHHHhcc------cCCCchH--HHH----HhhhhhhHHHHHHHHHhh-cCC-----Ch---hHHHHHHHHHHHHHHHhh
Q 016123 131 VTCIRNFR------RNRGPVS--GIL----KGYVGLSTAIFTDLCSAL-FAD-----DP---AKFLFMLAIVPFVVCLGA 189 (394)
Q Consensus 131 ~~~~~~Fp------~~RG~a~--gl~----~~~~glg~~i~~~i~~~~-~~~-----~~---~~~~~~~~~~~~~v~~~~ 189 (394)
.+.++.-+ .+|..++ +.. +.+.++|+.+...+.... ++. +. ...-.+...+|++..+++
T Consensus 341 ~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy~~~~~~q~~~~~~~i~~~~~~~P~~~~~~~ 420 (460)
T PRK11462 341 VMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDAAEKAQNSATISIIIALFTIVPAICYLLS 420 (460)
T ss_pred HHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333222 2344333 332 334455555555444321 111 11 223445566777777777
Q ss_pred hhcc-cccC
Q 016123 190 IFFL-RETT 197 (394)
Q Consensus 190 ~~~~-~~~p 197 (394)
.+++ +..|
T Consensus 421 ~~~~~~~y~ 429 (460)
T PRK11462 421 AIIAKRYYS 429 (460)
T ss_pred HHHHHHhcc
Confidence 6655 3444
No 225
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.16 E-value=0.0059 Score=61.61 Aligned_cols=153 Identities=18% Similarity=0.101 Sum_probs=90.8
Q ss_pred cccchhcHHHH-HHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCch---------HHHHHHHHHHHHHHHHHHHH
Q 016123 30 NYTFSNYSDAL-KTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAP---------IILLIGSLEGLVGYGAQWLV 98 (394)
Q Consensus 30 ~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r---------~~~~~g~~~~~~g~~~~~~~ 98 (394)
.+.+-.|.|.+ ++.+|++..+.+++++.-.+.+. ..+++|.+.||.-.| ..-.++....++.++.+.+.
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 34555677765 77899999999998877777765 589999999998652 22223333333344333322
Q ss_pred HHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHH-HhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCC---hhHH
Q 016123 99 VSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCI-RNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADD---PAKF 174 (394)
Q Consensus 99 ~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~-~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~---~~~~ 174 (394)
+. .+....+.+.. .+.+............. ..-|++-+..+|+.+....+.+.+.|.+...+..++ .|+.
T Consensus 354 --~~--~~~~~a~~~l~--~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~ 427 (466)
T KOG2532|consen 354 --SD--EHRLLAVILLT--IAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRI 427 (466)
T ss_pred --CC--CcchHHHHHHH--HHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHH
Confidence 11 01211111111 11122111222333333 337889999999999999999999999988888532 4655
Q ss_pred HHHHHHHHHHHHHh
Q 016123 175 LFMLAIVPFVVCLG 188 (394)
Q Consensus 175 ~~~~~~~~~~v~~~ 188 (394)
.+++..+..++..+
T Consensus 428 VF~i~a~i~~~~~i 441 (466)
T KOG2532|consen 428 VFLIAAGILIVGNI 441 (466)
T ss_pred HHHHHHHHHHHhch
Confidence 55555444444433
No 226
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.15 E-value=0.002 Score=64.59 Aligned_cols=152 Identities=11% Similarity=0.053 Sum_probs=100.2
Q ss_pred HHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHh
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGG 119 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G 119 (394)
.|+++-...-.+..+.....+-+. -++.+++++|+|.-+++.+|.....+=++..+.. .+.|+..-.-++.|
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L-------~n~W~vLPieilqg 470 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL-------QNPWMVLPIEILQG 470 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh-------cCchheeeHHHHHH
Confidence 455664444444333333334343 5788999999999999999999888877776654 46777776889999
Q ss_pred hhhhhhhhhHHHHHHHhcccC-CCchHHHHHhh-hhhhHHHHHHHHHhhcCCCh-hHHHHHHHHHHHHHHHhhhhccccc
Q 016123 120 NSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGY-VGLSTAIFTDLCSALFADDP-AKFLFMLAIVPFVVCLGAIFFLRET 196 (394)
Q Consensus 120 ~g~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~-~glg~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 196 (394)
+..+..+.+...+++..-|++ |..+-|+.... .|+|-.+.+.+...+++.-+ ...+...++.+.++++.-...-+..
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l 550 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLL 550 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999864 99999998763 35555555555555554433 3444444444444333333333444
Q ss_pred CCC
Q 016123 197 TPA 199 (394)
Q Consensus 197 p~~ 199 (394)
+++
T Consensus 551 ~~~ 553 (618)
T KOG3762|consen 551 KRR 553 (618)
T ss_pred ccc
Confidence 443
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.14 E-value=0.015 Score=56.53 Aligned_cols=139 Identities=14% Similarity=0.095 Sum_probs=95.3
Q ss_pred hcccccchhcHHHHHHH-cCCChhhhHHHHHHHHhhhhhh-hhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC
Q 016123 27 SGNNYTFSNYSDALKTL-MNLTQLELNNLSVVKDIGKAFG-LLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ 104 (394)
Q Consensus 27 ~g~~y~~~~~~~~l~~~-~g~s~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~ 104 (394)
.|.--+.+.+.+.+.++ .|.+..|.+.+.+....+...+ +++-++..|+-+.|.+.+.++...+-.+...++
T Consensus 249 VG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~------ 322 (422)
T COG0738 249 VGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI------ 322 (422)
T ss_pred HhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh------
Confidence 45544455566665544 7888888888777777776665 688889999999999888776555444444433
Q ss_pred CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHH
Q 016123 105 PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPAKF 174 (394)
Q Consensus 105 ~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~ 174 (394)
++.+.++ ..++.|+-.+..++.......+..|++-..+.++..+ ..+|+++.|++...+.+......
T Consensus 323 -~g~v~~~-~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l~m-aivGGAiiP~l~G~i~d~~g~~~ 389 (422)
T COG0738 323 -GGVVALY-ALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVM-AIVGGAIIPPLQGVIADMFGIQL 389 (422)
T ss_pred -cChHHHH-HHHHHHHHhHHHHHHHHHHHHhccCccccccceeeee-heecchHHHHHHHHHHHhhhhHH
Confidence 2444433 2355667777788888888889999665555555443 46899999999988877644333
No 228
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.13 E-value=0.0062 Score=51.87 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=72.8
Q ss_pred hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CC
Q 016123 63 AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR 141 (394)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R 141 (394)
+..+++..+.+++|+|+.+++|.+.+.+-...... ++.+.++....+.|+|.+...++.-..+.+.-++ +|
T Consensus 52 ~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~--------~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 52 ISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY--------PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 34677888999999999999999888754433221 3566777788999999999888877888888764 69
Q ss_pred CchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 142 GPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 142 G~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
++-.|+..+....+..+...+.....
T Consensus 124 ~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 124 GRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877776666655544433
No 229
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.12 E-value=0.0024 Score=48.22 Aligned_cols=69 Identities=16% Similarity=0.141 Sum_probs=61.5
Q ss_pred cccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHH
Q 016123 30 NYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLV 98 (394)
Q Consensus 30 ~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~ 98 (394)
.+.|+...|.++++.++|.++.+++.+...+|... .+...++.+|..+|+.+..+.+...+..+.+++.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 57888899999999999999999999999999976 6788999999899999999999988888887764
No 230
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.03 E-value=0.0044 Score=62.86 Aligned_cols=135 Identities=19% Similarity=0.095 Sum_probs=85.1
Q ss_pred cccccchhcHHHHHHH-cCCChhhhHHHHHHHHhhhhh-hhhhHhhhhc----cCchHHHHHHHHHHH-HHHHHHHHHHH
Q 016123 28 GNNYTFSNYSDALKTL-MNLTQLELNNLSVVKDIGKAF-GLLAGLASDR----IPAPIILLIGSLEGL-VGYGAQWLVVS 100 (394)
Q Consensus 28 g~~y~~~~~~~~l~~~-~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr----~G~r~~~~~g~~~~~-~g~~~~~~~~~ 100 (394)
...|+++.+.|.+.++ .|+|..+.+.+++...++.+. .+++|.+.|| ..+|........++. +|+..+...
T Consensus 287 lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~-- 364 (495)
T KOG2533|consen 287 LVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAA-- 364 (495)
T ss_pred hccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 4568889999987666 679999999988888888765 7899999999 666666666555554 343433221
Q ss_pred hccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc--cCCCchHHHHHhhhhhhHHHHHHHHHhhcCC
Q 016123 101 RKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR--RNRGPVSGILKGYVGLSTAIFTDLCSALFAD 169 (394)
Q Consensus 101 ~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp--~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~ 169 (394)
......+.+.+....+.....+....-.+.... .+|-...+....+.+.++.+.+++......+
T Consensus 365 -----~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap 430 (495)
T KOG2533|consen 365 -----AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAP 430 (495)
T ss_pred -----ccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCc
Confidence 111222222222222222222333334444444 2566677777788888889888888776655
No 231
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.98 E-value=0.01 Score=59.31 Aligned_cols=119 Identities=18% Similarity=0.069 Sum_probs=81.1
Q ss_pred cCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhh
Q 016123 44 MNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNST 122 (394)
Q Consensus 44 ~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~ 122 (394)
+|.+..+..........+.+. .++..++.+|+|+|++..++.++..+++.+..+.. .++.+.+++..++.++|.
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~-----~~~~~l~~~~~~i~~~g~ 341 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTP-----AGSVVLIVVALIIAGVGT 341 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhc-----CcchHHHHHHHHHHHHHh
Confidence 455555554444444455555 68899999999999999999999999999988763 135777777888888999
Q ss_pred hhhhhhHHHHHH------Hhccc--CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 123 TWMNTAVLVTCI------RNFRR--NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 123 g~~~~~~~~~~~------~~Fp~--~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
+..+...+.+++ ||-.. +-|..-|......=+|.++...+....+
T Consensus 342 ~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 342 GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777776665 44442 2466666655444455555554444443
No 232
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.89 E-value=0.004 Score=46.36 Aligned_cols=54 Identities=19% Similarity=0.245 Sum_probs=43.6
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHH
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEG 88 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~ 88 (394)
.|.+...++.|+|..|++.+.....+... ..|+.|.++||+++++.++.+...+
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 45555666799999999998777766665 4899999999999999998876654
No 233
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.88 E-value=0.039 Score=55.80 Aligned_cols=134 Identities=13% Similarity=0.050 Sum_probs=86.2
Q ss_pred hhhhHhhhhccCc-hHHHHHHHHHHHHHHHHHHHHHH--h---c--------cCCch-HHHHHHHHHHHhhhhhhhhhhH
Q 016123 65 GLLAGLASDRIPA-PIILLIGSLEGLVGYGAQWLVVS--R---K--------IQPLS-YWQMCVFLCMGGNSTTWMNTAV 129 (394)
Q Consensus 65 ~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~--~---~--------~~~~~-~~~l~~~~~l~G~g~g~~~~~~ 129 (394)
+++--++.+|+|+ |++..++.++.+++.....+... + . .++.. .+...+...+.|+..+..+..+
T Consensus 322 s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siP 401 (477)
T TIGR01301 322 SIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIP 401 (477)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHh
Confidence 5566778999996 56668888888888777654321 0 0 00001 2344445567788888888899
Q ss_pred HHHHHHhccc---CCCchHHHHHhhhhhhHHHHHHHHHhh---cCCChhHHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 130 LVTCIRNFRR---NRGPVSGILKGYVGLSTAIFTDLCSAL---FADDPAKFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 130 ~~~~~~~Fp~---~RG~a~gl~~~~~glg~~i~~~i~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
+.++++.-|+ +.|.-+|+.+...-+...+.+.....+ ++++....+.+-++...+.++.+.+.+|.++.
T Consensus 402 fal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 402 FALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred HHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999998883 469999999999888888777655443 33333334444444444455555666666553
No 234
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.58 E-value=0.0078 Score=62.19 Aligned_cols=148 Identities=17% Similarity=0.164 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhcc-cccchhcHHHH-HHHcCCCh---hhhHHHHHHHHhhhhh-hhhhHhhhhccCchH-HHHHHHHHHH
Q 016123 17 FVTAVWVQAISGN-NYTFSNYSDAL-KTLMNLTQ---LELNNLSVVKDIGKAF-GLLAGLASDRIPAPI-ILLIGSLEGL 89 (394)
Q Consensus 17 l~~~~~~~~~~g~-~y~~~~~~~~l-~~~~g~s~---~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~-~~~~g~~~~~ 89 (394)
+.+.+++.+..|. .|+...+-|+. ..-|+-+. .+.++.+....++... +.+.|.+..++++-| .++++.+++.
T Consensus 312 ~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~t 391 (599)
T PF06609_consen 312 FAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMT 391 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHH
Confidence 3333344444454 35555555654 44555443 2455665555566554 677888887766544 4557777776
Q ss_pred HHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 90 VGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 90 ~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
++..+++.. . . .+....+.+.++.|+|.|..........+-.-| ++-|+++|+..+...+|+.++..++...+.
T Consensus 392 a~~Gama~~-~--~--~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 392 AFCGAMAAV-R--P--DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HHHHHHHHc-c--C--CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 655555433 1 1 122333456778888888776555555555557 469999999999999999999998888775
Q ss_pred C
Q 016123 169 D 169 (394)
Q Consensus 169 ~ 169 (394)
+
T Consensus 467 n 467 (599)
T PF06609_consen 467 N 467 (599)
T ss_pred h
Confidence 3
No 235
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.57 E-value=0.014 Score=61.20 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=54.1
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWL 97 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~ 97 (394)
....++++|+++.++.+++.....++..+ ..+..+..-|.-|-+.+-+|.+++++|.++.++
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~al 181 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFAL 181 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhC
Confidence 34668999999999999988888888865 678899999999999999999999999988765
No 236
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.56 E-value=0.083 Score=54.04 Aligned_cols=130 Identities=12% Similarity=0.061 Sum_probs=87.3
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCc
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGP 143 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~ 143 (394)
....+.+.||+|||.....+..+..++++...+.... ...+...+...+...+.+..+.......++.+|+ .|..
T Consensus 367 ~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~ 442 (521)
T KOG0255|consen 367 YFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD----LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNT 442 (521)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 4466899999999999999999999999988775321 1111222333444445555555667888999996 5999
Q ss_pred hHHHHHhhhhhhHHHHHHHHHhhcCCC-hhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 144 VSGILKGYVGLSTAIFTDLCSALFADD-PAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 144 a~gl~~~~~glg~~i~~~i~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
+.+...+...+|+.+.+.+........ ...... .+....+..+++.+++|++...
T Consensus 443 ~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 443 AVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccCCC
Confidence 999999988888888777664433211 112222 4556666666666777766544
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.51 E-value=0.05 Score=53.22 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=89.6
Q ss_pred HHHcCCChhhhHHHHHHHHhhhhhh-hhhHhhhh-ccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Q 016123 41 KTLMNLTQLELNNLSVVKDIGKAFG-LLAGLASD-RIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 41 ~~~~g~s~~~~~~~~~~~~~~~~~~-~~~G~l~D-r~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~ 118 (394)
-+.||+|.+|...++.....|...+ ...|++.. |.+++++..+|+....+++.+...+ +.. .+.+.+...-++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a--~~~--~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA--GPL--GSPWLFRPGVFLL 311 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH--Hhc--ccchHHHHHHHHH
Confidence 5779999999988888777777664 47777666 7999999999999888888776554 221 3567777778899
Q ss_pred hhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 119 GNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
|+|.|...+.....+.+.-+ ++.|+.+|..-+...++..+...+..
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888875 57898888876655554444444333
No 238
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.46 E-value=0.033 Score=56.09 Aligned_cols=121 Identities=22% Similarity=0.245 Sum_probs=93.4
Q ss_pred HHHHcCCChhhhHHH-HHHHHhhhhhhh-hhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNL-SVVKDIGKAFGL-LAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCM 117 (394)
Q Consensus 40 l~~~~g~s~~~~~~~-~~~~~~~~~~~~-~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (394)
++..++|+..+.+.+ +....++...+. ....+...+|-|+++.+|.+...++....+++ +..|+.+....+
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-------~~~w~~~~~~v~ 340 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-------TETWMMFAAGVV 340 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-------ccchhhhHHHHH
Confidence 567899999999975 444444445554 55588888999999999999999999988875 467888877666
Q ss_pred HhhhhhhhhhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 118 GGNSTTWMNTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
.++. +...++.-+..+++-+ +++|++.++.....++++.+.+.++..++.
T Consensus 341 ~~~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 341 VALA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred HHhh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 6543 4445666677777775 689999999999999999999888877653
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.17 E-value=0.033 Score=54.14 Aligned_cols=125 Identities=19% Similarity=0.051 Sum_probs=84.0
Q ss_pred HHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhccC--chHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Q 016123 40 LKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDRIP--APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLC 116 (394)
Q Consensus 40 l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~ 116 (394)
..|.+..+.-++++......+...+ ..+.|.+.||++ ++.....|.++.+......-++ +++.++.+-++
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~-------~~~~~L~vp~~ 369 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA-------TSIAQLWVPNF 369 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh-------hhHHHHhhhhH
Confidence 4667775555777754444555554 789999999999 7666666666665443333222 35666766566
Q ss_pred HHhhhhhhhhhhHHHHHHHhcc-c------CCCchHHHHHhhhhhhHHHHHHHHHhhcCCCh
Q 016123 117 MGGNSTTWMNTAVLVTCIRNFR-R------NRGPVSGILKGYVGLSTAIFTDLCSALFADDP 171 (394)
Q Consensus 117 l~G~g~g~~~~~~~~~~~~~Fp-~------~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~ 171 (394)
..|++.+..+.....+....-. + --|...++...++++|.++.|.+...+.+...
T Consensus 370 ~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG 431 (464)
T KOG3764|consen 370 GLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG 431 (464)
T ss_pred HHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh
Confidence 6666666666555555544443 2 25899999999999999999988888877543
No 240
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.03 E-value=0.2 Score=50.90 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=75.2
Q ss_pred HHHHHHHHhhhh-hhhhhHhhhhccCc--h----H-HHHHHHHHHHHHHHHHHHHHHhccC--CchHHHHHHHHHHHhhh
Q 016123 52 NNLSVVKDIGKA-FGLLAGLASDRIPA--P----I-ILLIGSLEGLVGYGAQWLVVSRKIQ--PLSYWQMCVFLCMGGNS 121 (394)
Q Consensus 52 ~~~~~~~~~~~~-~~~~~G~l~Dr~G~--r----~-~~~~g~~~~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~g 121 (394)
+++.+...+..+ ++|+.+++-.|..+ | + =+.+|.++.+++++.+.+......+ ..+.+++.+..++..+|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 344444444443 47777777555522 1 1 1668888999998887654322111 12455566667778888
Q ss_pred hhhhhhhHHHHHHHhcccC-CCchHHHHHhh-hhhhHHHHHHHHHhh
Q 016123 122 TTWMNTAVLVTCIRNFRRN-RGPVSGILKGY-VGLSTAIFTDLCSAL 166 (394)
Q Consensus 122 ~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~-~glg~~i~~~i~~~~ 166 (394)
.-+..+.....+++..|+| ||..+|+.... ..+|..+.+.+....
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8777788889999999975 99999998663 356666666655543
No 241
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.83 E-value=0.044 Score=55.25 Aligned_cols=125 Identities=20% Similarity=0.237 Sum_probs=80.6
Q ss_pred hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCC
Q 016123 63 AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNR 141 (394)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~R 141 (394)
+.++..|.+.||+|||..+.+..+...+.-....+. .+|.+....+..|. +.........++..-. ++|
T Consensus 77 i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~--------~~~~~~~~~l~g~~--~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 77 ISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ--------GYWFFLLLGLSGGF--SAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH--------HHHHhhhcccccch--hhhhhhhhhheeeccchhHH
Confidence 448999999999999999999888887776665442 23332222222222 2223344555666665 469
Q ss_pred CchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH-hhhhcccccC
Q 016123 142 GPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCL-GAIFFLRETT 197 (394)
Q Consensus 142 G~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~p 197 (394)
-...|+..+.++.+..+.+.+.....+...-.....++....+..+ -..+++||+-
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccccc
Confidence 9999999999999999988888777665333344444444444444 3445555543
No 242
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.83 E-value=1.4 Score=44.63 Aligned_cols=151 Identities=10% Similarity=-0.047 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHhcccccchhcHHHHHHHcCCCh-----hhhHHHHHHHHhhh-h-hhhhhHhhhhccCchHHHHHHHH
Q 016123 14 WLGFVTAVWVQAISGNNYTFSNYSDALKTLMNLTQ-----LELNNLSVVKDIGK-A-FGLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 14 w~~l~~~~~~~~~~g~~y~~~~~~~~l~~~~g~s~-----~~~~~~~~~~~~~~-~-~~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
+..++...+..++....|. ..-++++.+..+. ..+.++-+...+.+ + +.++.+++.+|++++++.-+-..
T Consensus 6 ~~k~~~~~l~fF~il~~Y~---iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYT---ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3334444444444433332 3567888887743 45666555554444 3 37899999999999998887777
Q ss_pred HHHHHHHHHHHHHHhccCC--c----------------------hHHHHHHHHHHHhhhhhhhhh-hHHHHHHHhcc-cC
Q 016123 87 EGLVGYGAQWLVVSRKIQP--L----------------------SYWQMCVFLCMGGNSTTWMNT-AVLVTCIRNFR-RN 140 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~--~----------------------~~~~l~~~~~l~G~g~g~~~~-~~~~~~~~~Fp-~~ 140 (394)
.+..-+.++++........ + +.|...++.+..-+=...... .-+..+++.+. ++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 7766666665542210000 0 022222222222222222221 44566777775 45
Q ss_pred CCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 141 RGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 141 RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
-.+--++...+..+|..+.+.+...+.
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677777777777776666655543
No 243
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.56 E-value=0.47 Score=46.75 Aligned_cols=123 Identities=16% Similarity=0.152 Sum_probs=81.6
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCch
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPV 144 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a 144 (394)
-+.+-+..+|+..+.=+.+..++..+|.++.+++ ++.+.-.++-++.+++.|+.-..... .+..|++. +
T Consensus 76 Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~-------~~v~~~l~Gv~las~ssg~GE~tfL~-lt~~y~~~---~ 144 (402)
T PF02487_consen 76 KLIAPFFIHRVPYWIRILICVALSAAGMLLVAFS-------PSVWVRLLGVVLASLSSGLGEVTFLS-LTHFYGKS---S 144 (402)
T ss_pred HHHhHhhhhhccchHHHHHHHHHHHHHHhheeec-------cchhHHHHHHHHHhhhhhhhHHHHHH-HHHhcCcc---c
Confidence 4567778899887776777777888888877653 35554445667788888876544444 45667752 4
Q ss_pred HHHHHhhhhhhHHHHHHHHHhhcC--CChhHHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 145 SGILKGYVGLSTAIFTDLCSALFA--DDPAKFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 145 ~gl~~~~~glg~~i~~~i~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
++-..+|.|.++.+.+..+..+-. -..+..++....+|.+..+...+.++.+++
T Consensus 145 l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~ 200 (402)
T PF02487_consen 145 LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPT 200 (402)
T ss_pred cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 555667788887777766655443 234566777777777777766767765543
No 244
>PRK03612 spermidine synthase; Provisional
Probab=94.41 E-value=1.9 Score=44.38 Aligned_cols=54 Identities=7% Similarity=-0.014 Sum_probs=31.5
Q ss_pred CCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHHHHHHHhhhhcc
Q 016123 140 NRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFVVCLGAIFFL 193 (394)
Q Consensus 140 ~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~ 193 (394)
+-|...|-+.+...+|+.+.+.+...++-. ...+..+.++.+..+++++..+..
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~~~ 197 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLWLF 197 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777777788887777776665432 333444555555555554444333
No 245
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.91 E-value=1.9 Score=43.12 Aligned_cols=126 Identities=13% Similarity=-0.025 Sum_probs=77.3
Q ss_pred cchhcHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC---Cch
Q 016123 32 TFSNYSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ---PLS 107 (394)
Q Consensus 32 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~---~~~ 107 (394)
+|+-....+...-|+|...++.+-..+.+..+ ..+...++.+|+|..+.-+++...-.....+....+..... ..+
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 44444444544559999999987555555444 47899999999999999999988665444333222211110 011
Q ss_pred HHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHH
Q 016123 108 YWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTA 157 (394)
Q Consensus 108 ~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~ 157 (394)
...+..+..+.=+|.=....+....++++-|+ +||...|.-.+...+-..
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~l 406 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFEL 406 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHH
Confidence 22222222222233323456777888899985 799999998887655433
No 246
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.58 E-value=5 Score=40.13 Aligned_cols=69 Identities=16% Similarity=0.088 Sum_probs=49.6
Q ss_pred hHHHHhhchhHHHHHHHHHhcccceeeeeeChHHHHHHhCCCc--chhhHHHHHHHHHHhhhhhccccchhc
Q 016123 324 TIFEAMWTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYVD--VSIFVSLTSIWGFFGRIISGSVSEYFI 393 (394)
Q Consensus 324 t~~~~l~t~~Fwll~~~~~~~~g~g~~~~~n~~~i~~~~G~~~--~a~~vsl~si~~~~GRl~~G~lsD~~~ 393 (394)
.+++.+|++.|.-- +++.+.-...+.+-+.+..++.+.|+++ .+..=++-+++...|-++..++.+|+|
T Consensus 251 ~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 251 GWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred cHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46677777766543 3333333445667788888999999985 456777778888888899998888876
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.39 E-value=1.6 Score=43.82 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=74.3
Q ss_pred HHHHhhhhh-hhhhH---hhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccC-----------CchHHHHHHHHHHHhh
Q 016123 56 VVKDIGKAF-GLLAG---LASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQ-----------PLSYWQMCVFLCMGGN 120 (394)
Q Consensus 56 ~~~~~~~~~-~~~~G---~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~-----------~~~~~~l~~~~~l~G~ 120 (394)
....++.+. +.+.+ +=.+|+|+++++.++..+..++.++.........+ .++.....+..++.|+
T Consensus 286 ~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 286 IGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence 333444443 44444 44566999999999999999888876654322111 0123334456788899
Q ss_pred hhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHH
Q 016123 121 STTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFT 160 (394)
Q Consensus 121 g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~ 160 (394)
+-+...+.-...+...+|++|..+..+.....++++.+..
T Consensus 366 ~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHh
Confidence 9988888888889999999999999999988888876643
No 248
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=92.52 E-value=0.45 Score=46.31 Aligned_cols=120 Identities=15% Similarity=0.079 Sum_probs=78.4
Q ss_pred HHHcCCChhhhHHH-HHHHHhhhhhhhhhHhhhhccC--chHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHH
Q 016123 41 KTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDRIP--APIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCM 117 (394)
Q Consensus 41 ~~~~g~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l 117 (394)
.+.+|+++.|.+-+ ...+..+..++....+..||.. .+..+..+..++.=.+++.+.+ .....+++...+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~-------~~~~~l~~~s~l 361 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA-------RTPVVLYLGSTL 361 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------ccchhhhHHHHH
Confidence 46799999999984 4444444456788888888877 6767777666665555554432 122344544455
Q ss_pred HhhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 118 GGNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 118 ~G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
-.+..+..-+.-..++.+.-|+ +||.++|+......++=++.|.+....+
T Consensus 362 ~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~ 412 (451)
T KOG2615|consen 362 KSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIF 412 (451)
T ss_pred HHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeE
Confidence 5555454444455566677784 7999999998887777777776654443
No 249
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.48 E-value=0.63 Score=45.42 Aligned_cols=116 Identities=11% Similarity=0.033 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccC--CchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccC----CCchHHHHHhhh
Q 016123 79 IILLIGSLEGLVGYGAQWLVVSRKIQ--PLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRN----RGPVSGILKGYV 152 (394)
Q Consensus 79 ~~~~~g~~~~~~g~~~~~~~~~~~~~--~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~----RG~a~gl~~~~~ 152 (394)
+++++|.+++.+|++++.++...... +.+.+.+++...+.++|.|..-+.......+.|+++ |-....+...+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67889999999999996655322110 112356677777889999988777778899999753 444555667777
Q ss_pred hhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHhhhhccc
Q 016123 153 GLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLGAIFFLR 194 (394)
Q Consensus 153 glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 194 (394)
.+|+.+...+...+-+...|...+.++.+..+++++..+.-+
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 888777766665555556677777777666666666555544
No 250
>PTZ00207 hypothetical protein; Provisional
Probab=92.04 E-value=3 Score=43.46 Aligned_cols=119 Identities=10% Similarity=0.023 Sum_probs=76.3
Q ss_pred HHHHHHHc-CC-Chhh-----hHHHHHHHHhhhhh-hhhhHhhhhccC-----chHHHHHHHHHHHHHHHHHHHHHHhcc
Q 016123 37 SDALKTLM-NL-TQLE-----LNNLSVVKDIGKAF-GLLAGLASDRIP-----APIILLIGSLEGLVGYGAQWLVVSRKI 103 (394)
Q Consensus 37 ~~~l~~~~-g~-s~~~-----~~~~~~~~~~~~~~-~~~~G~l~Dr~G-----~r~~~~~g~~~~~~g~~~~~~~~~~~~ 103 (394)
..++-+.+ |. +..+ +++++....+|-+. +.+. .+..|.. ||.+.+....++.++.+++++..
T Consensus 376 ~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~---- 450 (591)
T PTZ00207 376 ARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTL---- 450 (591)
T ss_pred HHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHHHHHHHHHHHHHC----
Confidence 35676667 66 2232 23334444444433 3444 2222322 45555544445777777776642
Q ss_pred CCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHH
Q 016123 104 QPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 104 ~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
+-..+++..++.|++.|........+..+.|-|+-|+---+......+|+.+++-..
T Consensus 451 ---p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l 507 (591)
T PTZ00207 451 ---PKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLL 507 (591)
T ss_pred ---CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHH
Confidence 113577888899999999888888889999998899888888888888888885433
No 251
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.65 E-value=0.53 Score=47.26 Aligned_cols=95 Identities=13% Similarity=-0.121 Sum_probs=72.2
Q ss_pred hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-CC
Q 016123 63 AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-NR 141 (394)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-~R 141 (394)
+..++++.+.|+.|+|..+.+|+..+..-.+.+.. .|-+.++....+.|+|.++.+...-..++++.++ ++
T Consensus 65 v~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~--------~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ti 136 (461)
T KOG3098|consen 65 VSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF--------PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETI 136 (461)
T ss_pred HHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh--------cchHHHHHHHHHhhhhHHheecccceehhhcCChhhH
Confidence 45789999999999999999999888766555433 3556677788999999998887777889999874 58
Q ss_pred CchHHHHHhhhhhhHHHHHHHHHh
Q 016123 142 GPVSGILKGYVGLSTAIFTDLCSA 165 (394)
Q Consensus 142 G~a~gl~~~~~glg~~i~~~i~~~ 165 (394)
.+-.++.-+..-.+..+++.+...
T Consensus 137 e~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 137 ERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhee
Confidence 888888776665555555444433
No 252
>PF12832 MFS_1_like: MFS_1 like family
Probab=91.61 E-value=0.11 Score=38.49 Aligned_cols=45 Identities=16% Similarity=0.238 Sum_probs=38.6
Q ss_pred eeeeChHHHHHHhCCC--cchhhHHHHHHHHHHhhhhhccccchhcC
Q 016123 350 AVMNNMGQIGLALGYV--DVSIFVSLTSIWGFFGRIISGSVSEYFIK 394 (394)
Q Consensus 350 ~~~~n~~~i~~~~G~~--~~a~~vsl~si~~~~GRl~~G~lsD~~~r 394 (394)
.+...++-+.++.|++ +...+.++.-+...++..++|+++||.+|
T Consensus 18 ~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~ 64 (77)
T PF12832_consen 18 CLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGK 64 (77)
T ss_pred HHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 3556777888999997 46788888999999999999999999986
No 253
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=91.51 E-value=0.62 Score=49.12 Aligned_cols=66 Identities=11% Similarity=0.079 Sum_probs=46.6
Q ss_pred ccccchhcHHHH-HHHcCCChhhhHHHHHHHHh-hhh-hhhhhHhhhhccC--chHHHHHHHHHHHHHHHH
Q 016123 29 NNYTFSNYSDAL-KTLMNLTQLELNNLSVVKDI-GKA-FGLLAGLASDRIP--APIILLIGSLEGLVGYGA 94 (394)
Q Consensus 29 ~~y~~~~~~~~l-~~~~g~s~~~~~~~~~~~~~-~~~-~~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~~ 94 (394)
..+.+..+.|.+ ++++|++..+.+++.....+ +.. ..+++|++.||++ .|+.+..+.++..++.+.
T Consensus 345 ~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 345 AFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 345566677765 67899999999986554444 344 4789999999998 556777776666665544
No 254
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.43 E-value=0.095 Score=48.45 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=55.3
Q ss_pred HHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhh
Q 016123 42 TLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGN 120 (394)
Q Consensus 42 ~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 120 (394)
+.+++-..|++-+..++.-.. .++.+.|-+.||-|||+..+. +++-|.+.... .+ ++.+-.+.+.|.+.|+
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvt----ycitYiLsCiT--Kh--SpqYkVLmVGR~LGGi 136 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVT----YCITYILSCIT--KH--SPQYKVLMVGRVLGGI 136 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceee----ehHHHHHHHHh--hc--CCceEEEeehhhhhhH
Confidence 467888888887655544333 468999999999999997654 44455554433 11 2456677789999999
Q ss_pred hhhhhhhh
Q 016123 121 STTWMNTA 128 (394)
Q Consensus 121 g~g~~~~~ 128 (394)
..++.+.+
T Consensus 137 aTsLLFSa 144 (454)
T KOG4332|consen 137 ATSLLFSA 144 (454)
T ss_pred HHHHHHHH
Confidence 98877643
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=87.41 E-value=9.6 Score=37.42 Aligned_cols=172 Identities=13% Similarity=-0.003 Sum_probs=89.7
Q ss_pred HhcccccchhcHHHHHHHcCCChhhhHHHHHHHHhhhhhhhhhHhhhh-----ccCchHHHHHHHHHHHHHHHHHHHHH-
Q 016123 26 ISGNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGKAFGLLAGLASD-----RIPAPIILLIGSLEGLVGYGAQWLVV- 99 (394)
Q Consensus 26 ~~g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~G~l~D-----r~G~r~~~~~g~~~~~~g~~~~~~~~- 99 (394)
.-|..++..--.|.+-+.-|.|-++.+.++.+.. -...-.+...+.| |+||||.-++=. .+.+|.++..++.
T Consensus 42 lQGiP~GL~~~iP~lL~ak~vSyt~~a~fS~ay~-P~sLKllWaPiVDs~y~k~~GrrksWvvp~-q~llG~~mllLs~~ 119 (510)
T KOG3574|consen 42 LQGIPLGLIGAIPLLLQAKGVSYTSQAIFSFAYW-PFSLKLLWAPIVDSVYSKRFGRRKSWVVPC-QYLLGLFMLLLSYL 119 (510)
T ss_pred HcCCchhHhhhhHHHhcCCCcchhhhhhhhhhhh-HHHHHHHHHhhhHHHHHHhhccccceeeeh-HHHHHHHHHHHhhC
Confidence 3455555444556676677888888776554332 1112456677777 999999654322 1222333222221
Q ss_pred -Hh----ccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhc-ccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC----
Q 016123 100 -SR----KIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF-RRNRGPVSGILKGYVGLSTAIFTDLCSALFAD---- 169 (394)
Q Consensus 100 -~~----~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F-p~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~---- 169 (394)
.. ....++...+....++.-+.++.-..+.=....... |++-|-|.-....|...|.++...++-.+...
T Consensus 120 v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N 199 (510)
T KOG3574|consen 120 VDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCN 199 (510)
T ss_pred CCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhh
Confidence 11 111122222222222333343433443334444444 46788888777777777776665444333221
Q ss_pred -------------ChhHHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 170 -------------DPAKFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 170 -------------~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
...+++.|-+.+..+...+..++-++.+++
T Consensus 200 ~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~ 242 (510)
T KOG3574|consen 200 TYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDES 242 (510)
T ss_pred HHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchh
Confidence 124677777776666666666666666655
No 256
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=86.83 E-value=0.96 Score=45.95 Aligned_cols=57 Identities=21% Similarity=0.110 Sum_probs=44.3
Q ss_pred cHHHHHHHcCCChhhhHHHHHHHHhhhh-hhhhhHhhhhccCchHHHHHHHHHHHHHH
Q 016123 36 YSDALKTLMNLTQLELNNLSVVKDIGKA-FGLLAGLASDRIPAPIILLIGSLEGLVGY 92 (394)
Q Consensus 36 ~~~~l~~~~g~s~~~~~~~~~~~~~~~~-~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~ 92 (394)
+.+.+-+++|+++++.+.++....+..+ ..|+.|.++||+-.||.+++|..+..+..
T Consensus 33 ll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a 90 (618)
T KOG3762|consen 33 LLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTA 90 (618)
T ss_pred HHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 3455667899999999997665555554 58999999999999998888877665443
No 257
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.28 E-value=2.3 Score=42.37 Aligned_cols=126 Identities=10% Similarity=-0.004 Sum_probs=74.2
Q ss_pred hcHHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhc----cCchHHHH-HHHHHHHHHHHHHHHHHHh-----cc
Q 016123 35 NYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDR----IPAPIILL-IGSLEGLVGYGAQWLVVSR-----KI 103 (394)
Q Consensus 35 ~~~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr----~G~r~~~~-~g~~~~~~g~~~~~~~~~~-----~~ 103 (394)
.|.+|+.++.|.+..-.+.+=.+..+.. ..+|+.|...|| +||||..+ .+.++..++.++..++..- ..
T Consensus 53 sy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~ 132 (498)
T KOG0637|consen 53 SYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDN 132 (498)
T ss_pred ccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCC
Confidence 3678888899999876666544455544 459999999997 88888655 4555556777666554210 00
Q ss_pred CCc-----hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc-cCCCc-hHHHHHhhhhhhHHHHH
Q 016123 104 QPL-----SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR-RNRGP-VSGILKGYVGLSTAIFT 160 (394)
Q Consensus 104 ~~~-----~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp-~~RG~-a~gl~~~~~glg~~i~~ 160 (394)
... ...+..+..-+.=+.......++-........ ++|-+ |.+......++|+.+.-
T Consensus 133 ~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY 196 (498)
T KOG0637|consen 133 ERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGY 196 (498)
T ss_pred cccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeee
Confidence 001 01111112222223333445566667777773 33333 88888777788876653
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=85.47 E-value=2 Score=43.01 Aligned_cols=121 Identities=18% Similarity=0.172 Sum_probs=76.5
Q ss_pred CCChhhhHHHHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh-----ccCCchHHHHHHHHHHH
Q 016123 45 NLTQLELNNLSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR-----KIQPLSYWQMCVFLCMG 118 (394)
Q Consensus 45 g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~~~~l~ 118 (394)
|+++...+.+...+.++.+. ..+..+..-+..-|+++....++..+..+.....+.. .++ +.+..+.-.++.
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~--d~~f~lgd~~l~ 328 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIP--DQWFALGDTILE 328 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcC--CeEEEEEhHHHH
Confidence 37777777766666666554 4566666667788888888777666554432111110 011 111111223455
Q ss_pred hhhhhhhhhhHHHHHHHhccc-CCCchHHHHHhhhhhhHHHHHHHHHhhc
Q 016123 119 GNSTTWMNTAVLVTCIRNFRR-NRGPVSGILKGYVGLSTAIFTDLCSALF 167 (394)
Q Consensus 119 G~g~g~~~~~~~~~~~~~Fp~-~RG~a~gl~~~~~glg~~i~~~i~~~~~ 167 (394)
.+-..+.+.+....++|.-|+ .-|+.-++..+...+|..+...+...+.
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~ 378 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLM 378 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566667788889999997 5899999999888888877776665554
No 259
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=82.95 E-value=3.4 Score=41.15 Aligned_cols=138 Identities=13% Similarity=0.008 Sum_probs=70.9
Q ss_pred cccccchhcHHHHHHHcCCChhhhHHHHHHHHhhh-hhhhhhHhhhhccCc-hHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 016123 28 GNNYTFSNYSDALKTLMNLTQLELNNLSVVKDIGK-AFGLLAGLASDRIPA-PIILLIGSLEGLVGYGAQWLVVSRKIQP 105 (394)
Q Consensus 28 g~~y~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~-~~~~~~G~l~Dr~G~-r~~~~~g~~~~~~g~~~~~~~~~~~~~~ 105 (394)
|..|+.+.........-|++....+++.....++. +.+.++|.+.||..- |.++++......++...+... .... .
T Consensus 280 g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~-t~~~-~ 357 (480)
T KOG2563|consen 280 GLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTC-TLFL-G 357 (480)
T ss_pred HHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHh-hccC-C
Confidence 33455555444333445666677777655544444 558999999999754 445555555544553222211 1111 1
Q ss_pred chHHHHHHHHHHHhhhhhhhhhhHHHH-HHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 106 LSYWQMCVFLCMGGNSTTWMNTAVLVT-CIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 106 ~~~~~l~~~~~l~G~g~g~~~~~~~~~-~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
..+.++.-..+.|+.....++...-. +..-||..-|.-.|+....-.+=+.+...+.....+
T Consensus 358 -~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~ 420 (480)
T KOG2563|consen 358 -DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE 420 (480)
T ss_pred -ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh
Confidence 12233332333333322223333322 345689877777888766544444555555555444
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=80.67 E-value=49 Score=33.63 Aligned_cols=127 Identities=9% Similarity=0.080 Sum_probs=80.9
Q ss_pred hhhhhHhhhhccCch-------HHHHHHHHHHHHHHHHHHHHHH--hc-cCCchHHHHHHHHHHHhhhhhhhhhhHHHHH
Q 016123 64 FGLLAGLASDRIPAP-------IILLIGSLEGLVGYGAQWLVVS--RK-IQPLSYWQMCVFLCMGGNSTTWMNTAVLVTC 133 (394)
Q Consensus 64 ~~~~~G~l~Dr~G~r-------~~~~~g~~~~~~g~~~~~~~~~--~~-~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~ 133 (394)
++|+..++.-|.++| .=+-+|..+.+.+++.+..... +. ....+.+++....+++.+|.=+..+.....+
T Consensus 340 ~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~ 419 (498)
T COG3104 340 FSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMV 419 (498)
T ss_pred HHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 466666665553322 3456778888888887766511 11 1113567777777888899877778888999
Q ss_pred HHhcccC-CCchHHHHHhhhhhhHHHHHHHHHh------hcC-CChhHHHHHHHHHHHHHHHhhh
Q 016123 134 IRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSA------LFA-DDPAKFLFMLAIVPFVVCLGAI 190 (394)
Q Consensus 134 ~~~Fp~~-RG~a~gl~~~~~glg~~i~~~i~~~------~~~-~~~~~~~~~~~~~~~~v~~~~~ 190 (394)
.+.-|++ .+.+++........|..+...+... ..+ ....+++..++++..++.....
T Consensus 420 t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 420 TKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999975 8999999888887777776665542 111 1223455555555554444433
No 261
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=80.15 E-value=12 Score=37.06 Aligned_cols=113 Identities=11% Similarity=-0.029 Sum_probs=68.6
Q ss_pred ChhhhHHHHHHHHhhhhhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhh
Q 016123 47 TQLELNNLSVVKDIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMN 126 (394)
Q Consensus 47 s~~~~~~~~~~~~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~ 126 (394)
.+.+.-++.....+|...+=-...+ +-.|++.+...+-..--.+...-+..... ++.|.+++..+..|+-.|..|
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~---~rir~lwils~LQ~~nl~~~~l~s~~~fi--psi~ivf~lif~eGLlGGa~Y 353 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPF---FRIRRLWILSLLQVINLVFLLLQSWYRFI--PSIWIVFVLIFYEGLLGGASY 353 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceee---eehhhHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHhhhHHH
Confidence 3455556666666665432111122 23466666555433321111111111222 367777767777888888888
Q ss_pred hhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHH
Q 016123 127 TAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCS 164 (394)
Q Consensus 127 ~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~ 164 (394)
+-....+.+..| ++|..++|.+..+-++|..+.+.+.-
T Consensus 354 VNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 354 VNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 877877887776 67999999999999988777766543
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.74 E-value=59 Score=33.92 Aligned_cols=133 Identities=14% Similarity=0.028 Sum_probs=76.4
Q ss_pred hhcHHHHHHHcCCChhhhHHH-HHHHHhhhhhhhhhHhhhhc-cCchHHHHHHHHHHHHHHHHHHHHHHhc---c-----
Q 016123 34 SNYSDALKTLMNLTQLELNNL-SVVKDIGKAFGLLAGLASDR-IPAPIILLIGSLEGLVGYGAQWLVVSRK---I----- 103 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~-~~~~~~~~~~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g~~~~~~~~~~~---~----- 103 (394)
......+.+++|.+..++.-. .............+++++|- .||-+++.++.++..+|..+..+..... .
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~ 137 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKF 137 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccC
Confidence 345566788888888666653 33332222346789999998 5888899999999988876655432211 0
Q ss_pred -------CCchH---HHHHHHHHHHhhhhhhhhhhHHHHHHHhccc-----CCC--chHHHHHhhhhhhHHHHHHHHHhh
Q 016123 104 -------QPLSY---WQMCVFLCMGGNSTTWMNTAVLVTCIRNFRR-----NRG--PVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 104 -------~~~~~---~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~-----~RG--~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
..++- ..++....+..+|.|..-......-++-|++ ++. .-.........+|..+...+..+.
T Consensus 138 ~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyi 217 (571)
T KOG1237|consen 138 KPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYI 217 (571)
T ss_pred CCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhh
Confidence 00121 2334444556667776555556667777872 133 333444444455555444444333
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=64.96 E-value=62 Score=32.45 Aligned_cols=129 Identities=17% Similarity=0.078 Sum_probs=63.2
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCc
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQP-LSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGP 143 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~ 143 (394)
.+..-.+..|+..|.=+..+.++..+..+..........+. ..++..++..++.|++.+.... ..--.+..||++
T Consensus 62 ~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~-s~~gla~~fp~~--- 137 (437)
T TIGR00939 62 NSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQG-SLFGLAGVFPST--- 137 (437)
T ss_pred HHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcc-cchhhcccCCHH---
Confidence 45555667776664444444443332222221111111111 1244444456677777776654 334455678854
Q ss_pred hHHHHHhhhhhhHHHHHHH---HHhhcCCC--h---hHHHHHHHHHHHHHHHhhhhcccccC
Q 016123 144 VSGILKGYVGLSTAIFTDL---CSALFADD--P---AKFLFMLAIVPFVVCLGAIFFLRETT 197 (394)
Q Consensus 144 a~gl~~~~~glg~~i~~~i---~~~~~~~~--~---~~~~~~~~~~~~~v~~~~~~~~~~~p 197 (394)
-++....|.+++|.+.+.+ .....+++ . ....+.++++..++++++...++..|
T Consensus 138 ~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~ 199 (437)
T TIGR00939 138 YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLP 199 (437)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCH
Confidence 3445556777777665443 22222221 1 23455555566666666666555444
No 264
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=54.95 E-value=17 Score=34.75 Aligned_cols=125 Identities=14% Similarity=0.069 Sum_probs=71.6
Q ss_pred hhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCch
Q 016123 65 GLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPV 144 (394)
Q Consensus 65 ~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a 144 (394)
-..+-...||+.--+-+.+..++.+.++.+.++. .+.++-.++-.+..++.|+.-+.-..+ +..+|+. +
T Consensus 79 Kl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs-------~s~~~sL~GV~~aSissGlGEiTFL~l-ss~Y~~~---~ 147 (409)
T KOG3880|consen 79 KLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFS-------NSVPMSLLGVVFASISSGLGEITFLAL-SSRYPSI---V 147 (409)
T ss_pred HHhchhhhhhcccchHHHHHHHHHhcceEEEEec-------cchhHHHhhhhhhhhcCCcceeehhhh-hccCCCc---e
Confidence 3455567778544444455566677777765543 345544445566677777655433333 3333431 1
Q ss_pred HHHHHhhhhhhHHHHHHHHHhhc---CCChhHHHHHHHHHHHHHHHhhhhcccccCCCC
Q 016123 145 SGILKGYVGLSTAIFTDLCSALF---ADDPAKFLFMLAIVPFVVCLGAIFFLRETTPAS 200 (394)
Q Consensus 145 ~gl~~~~~glg~~i~~~i~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~p~~~ 200 (394)
..-...|.|..+.+.+.-+..+- +-.....++....+|++.++..++.++.|+...
T Consensus 148 i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~ 206 (409)
T KOG3880|consen 148 IAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVY 206 (409)
T ss_pred eccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcccc
Confidence 22223345555555544333332 334566777888889888888888888776544
No 265
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=51.76 E-value=15 Score=37.29 Aligned_cols=159 Identities=14% Similarity=0.127 Sum_probs=86.3
Q ss_pred cHHHHHHHHHHHHHhccc-cc-chhcHHHHHHHcCCChhhhHHHHH-HHHhhhh-h-hhhhHhhh---hccCchHHHHHH
Q 016123 13 KWLGFVTAVWVQAISGNN-YT-FSNYSDALKTLMNLTQLELNNLSV-VKDIGKA-F-GLLAGLAS---DRIPAPIILLIG 84 (394)
Q Consensus 13 ~w~~l~~~~~~~~~~g~~-y~-~~~~~~~l~~~~g~s~~~~~~~~~-~~~~~~~-~-~~~~G~l~---Dr~G~r~~~~~g 84 (394)
.|...+.++......-.. .. -+...+.....++|+..+.-.... ...+... . ........ -|+..|+.++.+
T Consensus 260 d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g 339 (488)
T KOG2325|consen 260 DWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLG 339 (488)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeeh
Confidence 355555555443222122 22 133444457788999988876422 2222222 1 22222222 344557777777
Q ss_pred HHHHHHHHHHHHHHHH---hc--------c-------------CCchHHHHHH-HHHHHhhhhhhhhhhHHHHHHHhc-c
Q 016123 85 SLEGLVGYGAQWLVVS---RK--------I-------------QPLSYWQMCV-FLCMGGNSTTWMNTAVLVTCIRNF-R 138 (394)
Q Consensus 85 ~~~~~~g~~~~~~~~~---~~--------~-------------~~~~~~~l~~-~~~l~G~g~g~~~~~~~~~~~~~F-p 138 (394)
.+.....+.+.-.-.. +. . +..+.+.+++ +-++.|.+..+...+..+.-+|.. |
T Consensus 340 ~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp 419 (488)
T KOG2325|consen 340 FLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGP 419 (488)
T ss_pred HHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCC
Confidence 5555444443221100 00 0 0011222222 345566666666667778888888 7
Q ss_pred cCCCchHHHHHhhhhhhHHHHHHHHHhhcCCCh
Q 016123 139 RNRGPVSGILKGYVGLSTAIFTDLCSALFADDP 171 (394)
Q Consensus 139 ~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~ 171 (394)
+++|++.|+.......+-.+.+.+....+....
T Consensus 420 ~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g 452 (488)
T KOG2325|consen 420 RDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG 452 (488)
T ss_pred ccccceeEEEEeccchhhhhhHHHHhhhHHhcC
Confidence 899999999999888888888777766665433
No 266
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=51.07 E-value=23 Score=32.07 Aligned_cols=91 Identities=9% Similarity=0.043 Sum_probs=54.5
Q ss_pred hhhHhhhhccCchH--------HHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhc
Q 016123 66 LLAGLASDRIPAPI--------ILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNF 137 (394)
Q Consensus 66 ~~~G~l~Dr~G~r~--------~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~F 137 (394)
+=.+.+.||||.+. +.+.|.++-++-+-+++-..... ....=+....-.|.|.+...+++...+.+.|
T Consensus 125 p~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~----~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~ 200 (241)
T PF11299_consen 125 PNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASL----GIFHPYALAMASGVGSGSMMAAASGALAAAY 200 (241)
T ss_pred cceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhc----cCCCHHHHHHHcCCcHHHHHHHHHHHHHHHC
Confidence 34578999998763 44455554443333332211110 1111122334467888887888888999999
Q ss_pred ccCCCchHHHHHhhhhhhHHHHH
Q 016123 138 RRNRGPVSGILKGYVGLSTAIFT 160 (394)
Q Consensus 138 p~~RG~a~gl~~~~~glg~~i~~ 160 (394)
|+......+...+.+-+.+....
T Consensus 201 P~~a~~i~A~AaaSNllt~~~G~ 223 (241)
T PF11299_consen 201 PEMADQILAFAAASNLLTSVTGL 223 (241)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 99888888887776666555443
No 267
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=49.99 E-value=2.6e+02 Score=27.44 Aligned_cols=87 Identities=13% Similarity=0.045 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC--ChhHHHHHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFAD--DPAKFLFMLAIVPFV 184 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~--~~~~~~~~~~~~~~~ 184 (394)
+.+.++..-.+.|.=.|+-.+..+.+..+-..+-+-....+.. .=.+|+...+.....++-. .-.+--...+.+-.+
T Consensus 104 ~~~Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k~~~s~vl~-~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~ 182 (508)
T COG4262 104 SRLVLYALTAVIGVLVGAEIPLLMRMLQRRQAKAKDLGSRVLT-LDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLA 182 (508)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhhhhhhh-hHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHH
Confidence 4566666666666656665555555555522222222222222 2456666665555554432 122333444444445
Q ss_pred HHHhhhhccc
Q 016123 185 VCLGAIFFLR 194 (394)
Q Consensus 185 v~~~~~~~~~ 194 (394)
.+++..+.+|
T Consensus 183 aAvv~~fllr 192 (508)
T COG4262 183 AAVVTLFLLR 192 (508)
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 268
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=49.90 E-value=21 Score=35.92 Aligned_cols=36 Identities=17% Similarity=0.004 Sum_probs=26.3
Q ss_pred hhhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHH
Q 016123 62 KAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWL 97 (394)
Q Consensus 62 ~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~ 97 (394)
.+.+....++.||+|-|+..+.+...+.++..+...
T Consensus 346 gi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl 381 (498)
T KOG0637|consen 346 GIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGL 381 (498)
T ss_pred HHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhh
Confidence 345778899999999888877777766666555443
No 269
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=49.29 E-value=64 Score=27.26 Aligned_cols=87 Identities=14% Similarity=0.045 Sum_probs=43.5
Q ss_pred hHhhhhccCchHHHHHHHHHH-HHHHHHHHH-HHHhccCC-chHHHHHHHHHHHhhhh-hhhhhhHHHHHHHhcccCCCc
Q 016123 68 AGLASDRIPAPIILLIGSLEG-LVGYGAQWL-VVSRKIQP-LSYWQMCVFLCMGGNST-TWMNTAVLVTCIRNFRRNRGP 143 (394)
Q Consensus 68 ~G~l~Dr~G~r~~~~~g~~~~-~~g~~~~~~-~~~~~~~~-~~~~~l~~~~~l~G~g~-g~~~~~~~~~~~~~Fp~~RG~ 143 (394)
-=.+.||.-+|..+..|+-.. +++.+...+ ........ ++...+....++.|+|. |+.| -.+.+.|=|++.|.
T Consensus 54 P~~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGisY---GilSaSWD~~r~GS 130 (153)
T PF11947_consen 54 PEVVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGISY---GILSASWDPEREGS 130 (153)
T ss_pred CHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhhhh---hhcccccCCCCCCC
Confidence 345677777776665554422 222222222 11221111 12222333334444443 3333 24456888889999
Q ss_pred hHHHHHhhhhhhHH
Q 016123 144 VSGILKGYVGLSTA 157 (394)
Q Consensus 144 a~gl~~~~~glg~~ 157 (394)
.+|+-..-..++-+
T Consensus 131 llG~~e~~~N~~r~ 144 (153)
T PF11947_consen 131 LLGWEEFKRNWGRM 144 (153)
T ss_pred cccHHHHHHhHHHH
Confidence 99998776666543
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=45.94 E-value=71 Score=34.21 Aligned_cols=63 Identities=14% Similarity=0.075 Sum_probs=41.8
Q ss_pred ccchhcHHH-HHHHcCCChhhhHHHHHHHHhhh-hh-hhhhHhhhhccC--chHHHHHHHHHHHHHHH
Q 016123 31 YTFSNYSDA-LKTLMNLTQLELNNLSVVKDIGK-AF-GLLAGLASDRIP--APIILLIGSLEGLVGYG 93 (394)
Q Consensus 31 y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~~~-~~-~~~~G~l~Dr~G--~r~~~~~g~~~~~~g~~ 93 (394)
..+..|.|. ++++||.+++.++.++....+.. .. ..++|+++.|+- .|....+..+...+.++
T Consensus 409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~ 476 (735)
T KOG3626|consen 409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLL 476 (735)
T ss_pred hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHH
Confidence 456677776 58899999999999654444544 34 569999999964 44455444444444433
No 271
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=43.24 E-value=7.9 Score=36.76 Aligned_cols=20 Identities=20% Similarity=0.404 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHhhhhhccc
Q 016123 369 IFVSLTSIWGFFGRIISGSV 388 (394)
Q Consensus 369 ~~vsl~si~~~~GRl~~G~l 388 (394)
.+..++.++-.+||.+.++.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp --------------------
T ss_pred HHHHHHHHHHHhcchhccee
Confidence 45667889999999988774
No 272
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=42.81 E-value=3.4e+02 Score=27.93 Aligned_cols=61 Identities=18% Similarity=0.082 Sum_probs=42.7
Q ss_pred ccCCCchHHHHHhhhhhhHHHHHHHHHhhcCC-----------------ChhHHHHHHHHHHHHHHHhhhhcccccCC
Q 016123 138 RRNRGPVSGILKGYVGLSTAIFTDLCSALFAD-----------------DPAKFLFMLAIVPFVVCLGAIFFLRETTP 198 (394)
Q Consensus 138 p~~RG~a~gl~~~~~glg~~i~~~i~~~~~~~-----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~p~ 198 (394)
|+++|.|.---..|...|-++.-.++-.+-.. ....|+.|-+++..++.+...++-+|.|+
T Consensus 149 ~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~ 226 (544)
T PF13000_consen 149 PENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPH 226 (544)
T ss_pred hhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccc
Confidence 56788888877777777766654444333211 13578999999999888888888887763
No 273
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=42.66 E-value=92 Score=31.83 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=53.3
Q ss_pred HhhhhhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcc
Q 016123 59 DIGKAFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFR 138 (394)
Q Consensus 59 ~~~~~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp 138 (394)
.++.+.++.+|++-.+..+.--+.++..-..-|..++.... ++++|..|+..++.+....+..+.+..-+++...
T Consensus 309 llga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~-----t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~ 383 (511)
T TIGR00806 309 LLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQ-----SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLS 383 (511)
T ss_pred HHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556688899987766443344444443333333322221 1578988887777776667666666677778877
Q ss_pred cC-CCchHHHHH
Q 016123 139 RN-RGPVSGILK 149 (394)
Q Consensus 139 ~~-RG~a~gl~~ 149 (394)
++ -|+..|+-+
T Consensus 384 ~~~~aLvFGiNt 395 (511)
T TIGR00806 384 KELCALVFGINT 395 (511)
T ss_pred ccceEEEEecHH
Confidence 55 588888743
No 274
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.20 E-value=59 Score=25.66 Aligned_cols=23 Identities=22% Similarity=0.040 Sum_probs=13.9
Q ss_pred hhhhhhHhhhhcc-CchHHHHHHH
Q 016123 63 AFGLLAGLASDRI-PAPIILLIGS 85 (394)
Q Consensus 63 ~~~~~~G~l~Dr~-G~r~~~~~g~ 85 (394)
+++...||+.||| |.++.-+|..
T Consensus 57 lVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 57 LVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHhcCCCcHHHHHH
Confidence 4577788888884 4444444333
No 275
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=41.63 E-value=1.4e+02 Score=22.91 Aligned_cols=19 Identities=16% Similarity=0.074 Sum_probs=9.7
Q ss_pred hhhHhhhhccCchHHHHHH
Q 016123 66 LLAGLASDRIPAPIILLIG 84 (394)
Q Consensus 66 ~~~G~l~Dr~G~r~~~~~g 84 (394)
.+.|.+.|+.|.+....+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~ 123 (141)
T TIGR00880 105 PLGGVLAQFLGWRAPFLFL 123 (141)
T ss_pred HhHHHHhcccchHHHHHHH
Confidence 4555555555555444433
No 276
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=40.98 E-value=96 Score=31.37 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=23.3
Q ss_pred hhcHHHHHHHcCCChhhhHHHHHHHHhhhhh-hhhhHhhhhc
Q 016123 34 SNYSDALKTLMNLTQLELNNLSVVKDIGKAF-GLLAGLASDR 74 (394)
Q Consensus 34 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~-~~~~G~l~Dr 74 (394)
..+.+...+--|.+..+..++......+... ..++|.+.||
T Consensus 268 p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 268 PAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred hhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 3444444444455554444455555555544 6788889998
No 277
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.99 E-value=1e+02 Score=24.01 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=15.3
Q ss_pred hhhhhHhhhhc-cCchHHHHHHHHHHH
Q 016123 64 FGLLAGLASDR-IPAPIILLIGSLEGL 89 (394)
Q Consensus 64 ~~~~~G~l~Dr-~G~r~~~~~g~~~~~ 89 (394)
.+...|+..|+ +|.++...+..++.+
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 46777888887 665554444443333
No 278
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=29.36 E-value=4.5e+02 Score=24.12 Aligned_cols=54 Identities=11% Similarity=-0.042 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHH
Q 016123 107 SYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLC 163 (394)
Q Consensus 107 ~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~ 163 (394)
+....|..+...|+-. ......-...|..| +|...-.+..++.++|..+...+.
T Consensus 33 s~~FyY~sg~~lGv~~--s~li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~ 86 (249)
T PF10225_consen 33 SVLFYYSSGISLGVLA--SLLILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLW 86 (249)
T ss_pred ChhHHHhhhHHHHHHH--HHHHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHH
Confidence 4444444444444322 22344556789999 666666666666666655554443
No 279
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=28.28 E-value=6.6e+02 Score=25.68 Aligned_cols=106 Identities=11% Similarity=0.034 Sum_probs=59.9
Q ss_pred hhhhhhHhhhhccCchHHHHHHHHHHHHHHHHHHHHHHh---cc-CC-----------c---------hHHHHHHHHHHH
Q 016123 63 AFGLLAGLASDRIPAPIILLIGSLEGLVGYGAQWLVVSR---KI-QP-----------L---------SYWQMCVFLCMG 118 (394)
Q Consensus 63 ~~~~~~G~l~Dr~G~r~~~~~g~~~~~~g~~~~~~~~~~---~~-~~-----------~---------~~~~l~~~~~l~ 118 (394)
.+..+..++.+|++++++.-+-...+..-+.++++..-. .. ++ . +.|...++.++.
T Consensus 74 ~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~a 153 (491)
T PF03219_consen 74 LFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMA 153 (491)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHH
Confidence 347789999999999998877766666656555553210 00 00 0 111122222221
Q ss_pred hhhhhhh-hhhHHHHHHHhcc-cCCCchHHHHHhhhhhhHHHHHHHHHhhcC
Q 016123 119 GNSTTWM-NTAVLVTCIRNFR-RNRGPVSGILKGYVGLSTAIFTDLCSALFA 168 (394)
Q Consensus 119 G~g~g~~-~~~~~~~~~~~Fp-~~RG~a~gl~~~~~glg~~i~~~i~~~~~~ 168 (394)
-+=.... ...-+..+.+.++ ++-.+--++...+..+|..+.+.+...+-+
T Consensus 154 ElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 154 ELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1123566777886 556677777777777877777776666554
No 280
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=25.28 E-value=2.8e+02 Score=29.54 Aligned_cols=75 Identities=12% Similarity=0.014 Sum_probs=42.2
Q ss_pred HHHHHhhhhhhhhhhHHHHHHHhcccC-CCchHHHHHhhhhhhHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHh
Q 016123 114 FLCMGGNSTTWMNTAVLVTCIRNFRRN-RGPVSGILKGYVGLSTAIFTDLCSALFADDPAKFLFMLAIVPFVVCLG 188 (394)
Q Consensus 114 ~~~l~G~g~g~~~~~~~~~~~~~Fp~~-RG~a~gl~~~~~glg~~i~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 188 (394)
-.++.++|-.+......-..-.-.|++ |..+.++..+..++|..+...+...-...+.+.-+.+.+.+..++.++
T Consensus 571 q~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (654)
T TIGR00926 571 QYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFENFSVQAAEFFLFASLMLVVMAI 646 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHHH
Confidence 345556666655444444444555654 888888888888888877766655543333333333333334433333
No 281
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=23.47 E-value=66 Score=31.42 Aligned_cols=182 Identities=13% Similarity=0.012 Sum_probs=0.0
Q ss_pred CCcH-HHHHHHHHHHHHhcccccchhcHHHHH-HHcCCChhhhHH-HHHHHHhhhhh-hhhhHhhhhccCchHHHHHHHH
Q 016123 11 AGKW-LGFVTAVWVQAISGNNYTFSNYSDALK-TLMNLTQLELNN-LSVVKDIGKAF-GLLAGLASDRIPAPIILLIGSL 86 (394)
Q Consensus 11 ~~~w-~~l~~~~~~~~~~g~~y~~~~~~~~l~-~~~g~s~~~~~~-~~~~~~~~~~~-~~~~G~l~Dr~G~r~~~~~g~~ 86 (394)
.+.| .+...-++-.+.--..-+=+...|.+. .+-|++..|+.- +.-.-.-...+ -.+.=.+.|-.--|+++++-.+
T Consensus 1 m~~W~~~~~llC~yG~~~e~RPseP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~l 80 (433)
T KOG3810|consen 1 MKSWLKITCLLCLYGFVREFRPSEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQAL 80 (433)
T ss_pred CcchhhhhhhhhhhhHHHHhCCCCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeecc
Q ss_pred HHHHHHHHHHHHHHhccCCchHHHHHHHHHHHhhhhhhhhhhHHHHHHHhcccCCCchHHHHHhhhhhhHHHHHHHHHhh
Q 016123 87 EGLVGYGAQWLVVSRKIQPLSYWQMCVFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSAL 166 (394)
Q Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~l~G~g~g~~~~~~~~~~~~~Fp~~RG~a~gl~~~~~glg~~i~~~i~~~~ 166 (394)
.....+.++-+. ++.+.+-+.-+..|...+.-..-....-+++=|+++-+++|-.-+..=.|-.+...+.+.+
T Consensus 81 s~v~~w~~lv~g-------~sV~~mQvlE~FyG~~tAaEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlL 153 (433)
T KOG3810|consen 81 SGVPVWIMLVFG-------PSVKAMQVLEFFYGPATAAEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLL 153 (433)
T ss_pred chhHHHHHHHhc-------CCchheeeehhhcChHHHHHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHH
Q ss_pred cCCChh--HHHHHHHHHHHHHHHhhhhcccccCCC
Q 016123 167 FADDPA--KFLFMLAIVPFVVCLGAIFFLRETTPA 199 (394)
Q Consensus 167 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~p~~ 199 (394)
...++. ..+=.+......++++..+++|.+|++
T Consensus 154 vs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rS 188 (433)
T KOG3810|consen 154 VSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRS 188 (433)
T ss_pred hhhcccchhhhchhhHHHHHHHHHHHhhCCCCchh
No 282
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=22.88 E-value=28 Score=35.98 Aligned_cols=61 Identities=18% Similarity=0.224 Sum_probs=0.0
Q ss_pred ccchhcHHH-HHHHcCCChhhhHHHHHHHHh-hhhh-hhhhHhhhhccCc--hHHHHHHHHHHHHH
Q 016123 31 YTFSNYSDA-LKTLMNLTQLELNNLSVVKDI-GKAF-GLLAGLASDRIPA--PIILLIGSLEGLVG 91 (394)
Q Consensus 31 y~~~~~~~~-l~~~~g~s~~~~~~~~~~~~~-~~~~-~~~~G~l~Dr~G~--r~~~~~g~~~~~~g 91 (394)
..+..|.|. ++.+|+.++++++++.....+ +..+ .+++|++..|+.. |..+....+...++
T Consensus 322 ~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 322 SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 356677776 588999999999985443333 4444 6799999999755 44444444433333
No 283
>PRK10692 hypothetical protein; Provisional
Probab=22.05 E-value=3.1e+02 Score=20.73 Aligned_cols=18 Identities=17% Similarity=0.071 Sum_probs=9.8
Q ss_pred chHHHHHHHHHHHHHHHH
Q 016123 77 APIILLIGSLEGLVGYGA 94 (394)
Q Consensus 77 ~r~~~~~g~~~~~~g~~~ 94 (394)
||...++|.+++++|.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVV 20 (92)
T ss_pred chhhHHHhhHHHHHHHHH
Confidence 445555566655555543
No 284
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=22.05 E-value=2.5e+02 Score=18.75 Aligned_cols=28 Identities=14% Similarity=0.112 Sum_probs=16.1
Q ss_pred hhhhhHhhhhc-cCchHHHHHHHHHHHHH
Q 016123 64 FGLLAGLASDR-IPAPIILLIGSLEGLVG 91 (394)
Q Consensus 64 ~~~~~G~l~Dr-~G~r~~~~~g~~~~~~g 91 (394)
.+...|+..|+ ++.++...+..++.++.
T Consensus 16 ~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 16 VGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 35667777776 66655555544444433
No 285
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=20.25 E-value=2.8e+02 Score=20.83 Aligned_cols=18 Identities=17% Similarity=0.143 Sum_probs=9.6
Q ss_pred chHHHHHHHHHHHHHHHH
Q 016123 77 APIILLIGSLEGLVGYGA 94 (394)
Q Consensus 77 ~r~~~~~g~~~~~~g~~~ 94 (394)
||...++|.+++++|.+.
T Consensus 3 Rk~a~~~GN~lMglGmv~ 20 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVV 20 (89)
T ss_pred chhhHHHhhHHHHHhHHH
Confidence 445555555555555443
Done!