Query 016124
Match_columns 394
No_of_seqs 1230 out of 1687
Neff 12.3
Searched_HMMs 29240
Date Mon Mar 25 08:17:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016124.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016124hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sf4_A G-protein-signaling mod 100.0 8.6E-34 3E-38 244.7 39.0 341 14-375 7-367 (406)
2 1w3b_A UDP-N-acetylglucosamine 100.0 1.2E-34 4.1E-39 248.4 30.5 309 13-388 64-372 (388)
3 1w3b_A UDP-N-acetylglucosamine 100.0 1.3E-33 4.5E-38 242.0 28.4 309 12-387 29-337 (388)
4 4a1s_A PINS, partner of inscut 100.0 1.9E-31 6.7E-36 230.4 37.4 314 13-345 45-375 (411)
5 4a1s_A PINS, partner of inscut 100.0 2.8E-31 9.7E-36 229.3 37.2 317 55-390 45-378 (411)
6 3sf4_A G-protein-signaling mod 100.0 5.6E-31 1.9E-35 227.1 36.8 313 57-388 8-340 (406)
7 3ro2_A PINS homolog, G-protein 100.0 1E-30 3.4E-35 219.7 37.2 313 58-389 5-337 (338)
8 3ro2_A PINS homolog, G-protein 100.0 1.4E-30 4.9E-35 218.7 37.3 311 16-345 5-335 (338)
9 4g1t_A Interferon-induced prot 100.0 1.5E-32 5E-37 241.8 25.4 350 12-392 47-467 (472)
10 2y4t_A DNAJ homolog subfamily 100.0 2E-31 7E-36 233.1 31.4 320 7-387 17-361 (450)
11 3ieg_A DNAJ homolog subfamily 100.0 9.8E-31 3.3E-35 221.7 33.1 315 16-388 3-339 (359)
12 3ulq_A Response regulator aspa 100.0 2.2E-28 7.5E-33 209.0 40.9 352 13-389 9-373 (383)
13 2xpi_A Anaphase-promoting comp 100.0 4.9E-29 1.7E-33 225.9 36.9 324 13-389 197-584 (597)
14 3fp2_A TPR repeat-containing p 100.0 1.4E-29 4.6E-34 226.6 32.0 325 12-390 55-497 (537)
15 4eqf_A PEX5-related protein; a 100.0 7.5E-30 2.6E-34 216.8 24.6 298 11-349 60-363 (365)
16 3fp2_A TPR repeat-containing p 100.0 2.6E-29 9E-34 224.7 29.2 322 13-388 22-461 (537)
17 3hym_B Cell division cycle pro 100.0 9.9E-30 3.4E-34 213.0 23.5 298 16-372 22-322 (330)
18 1fch_A Peroxisomal targeting s 100.0 1.9E-30 6.7E-35 220.8 19.5 319 23-388 32-363 (368)
19 3nf1_A KLC 1, kinesin light ch 100.0 1.6E-28 5.4E-33 203.9 30.2 287 4-300 15-308 (311)
20 3ulq_A Response regulator aspa 100.0 9.7E-28 3.3E-32 205.0 35.4 272 59-349 104-375 (383)
21 2gw1_A Mitochondrial precursor 100.0 2.2E-28 7.4E-33 217.6 32.6 325 13-388 3-405 (514)
22 3nf1_A KLC 1, kinesin light ch 100.0 2.4E-28 8.3E-33 202.8 30.4 285 92-387 19-310 (311)
23 3q15_A PSP28, response regulat 100.0 3.2E-27 1.1E-31 201.3 37.5 341 25-391 21-372 (378)
24 4eqf_A PEX5-related protein; a 100.0 6.8E-29 2.3E-33 210.9 25.5 288 56-384 63-356 (365)
25 2gw1_A Mitochondrial precursor 100.0 6.3E-29 2.2E-33 221.0 26.0 288 58-391 186-485 (514)
26 1fch_A Peroxisomal targeting s 100.0 1.4E-28 4.9E-33 209.2 25.2 287 16-349 64-366 (368)
27 2y4t_A DNAJ homolog subfamily 100.0 6.3E-28 2.2E-32 210.9 27.9 292 12-364 56-372 (450)
28 3q15_A PSP28, response regulat 100.0 1.4E-26 4.7E-31 197.4 33.5 270 58-347 101-370 (378)
29 3ieg_A DNAJ homolog subfamily 100.0 2.7E-27 9.1E-32 200.6 29.0 297 12-369 33-354 (359)
30 3hym_B Cell division cycle pro 100.0 4.6E-28 1.6E-32 202.9 23.9 278 59-387 23-302 (330)
31 2xpi_A Anaphase-promoting comp 100.0 2.8E-27 9.6E-32 214.3 30.3 293 13-366 302-595 (597)
32 3edt_B KLC 2, kinesin light ch 100.0 2.4E-27 8.3E-32 193.9 26.0 270 111-385 12-282 (283)
33 3edt_B KLC 2, kinesin light ch 100.0 6.5E-27 2.2E-31 191.4 27.3 271 25-299 10-281 (283)
34 4g1t_A Interferon-induced prot 100.0 1.5E-27 5E-32 209.9 24.8 316 28-385 23-364 (472)
35 3cv0_A Peroxisome targeting si 100.0 3.4E-27 1.2E-31 197.3 23.4 291 10-348 14-321 (327)
36 3cv0_A Peroxisome targeting si 100.0 9.7E-27 3.3E-31 194.6 24.9 288 57-388 20-319 (327)
37 1hz4_A MALT regulatory protein 100.0 6.7E-25 2.3E-29 186.8 35.9 312 14-345 12-325 (373)
38 1hz4_A MALT regulatory protein 99.9 2.7E-24 9.2E-29 183.1 33.5 313 56-388 12-326 (373)
39 3uq3_A Heat shock protein STI1 99.9 2.9E-24 1E-28 173.1 29.7 254 56-364 3-256 (258)
40 3uq3_A Heat shock protein STI1 99.9 3.6E-24 1.2E-28 172.6 29.3 254 13-320 2-255 (258)
41 2h6f_A Protein farnesyltransfe 99.9 4.4E-25 1.5E-29 185.7 24.2 256 11-325 92-366 (382)
42 3u4t_A TPR repeat-containing p 99.9 1.7E-25 5.9E-30 181.9 20.3 250 101-390 4-256 (272)
43 3u4t_A TPR repeat-containing p 99.9 4.3E-25 1.5E-29 179.5 21.3 244 59-342 4-250 (272)
44 2h6f_A Protein farnesyltransfe 99.9 1.2E-24 4.1E-29 183.1 23.6 255 54-368 93-366 (382)
45 2pl2_A Hypothetical conserved 99.9 6E-25 2.1E-29 171.7 18.5 200 13-255 2-212 (217)
46 2xm6_A Protein corresponding t 99.9 1.1E-22 3.7E-27 179.3 33.4 296 16-385 75-433 (490)
47 2pl2_A Hypothetical conserved 99.9 2.4E-24 8.4E-29 168.2 19.7 197 58-297 5-212 (217)
48 2xm6_A Protein corresponding t 99.9 1.7E-22 5.8E-27 178.1 31.9 294 15-384 38-396 (490)
49 3mkr_A Coatomer subunit epsilo 99.9 4.3E-22 1.5E-26 162.3 27.1 279 24-378 7-288 (291)
50 1ouv_A Conserved hypothetical 99.9 1.6E-21 5.5E-26 158.4 26.9 225 13-299 3-251 (273)
51 1ouv_A Conserved hypothetical 99.9 4.7E-21 1.6E-25 155.7 28.3 229 97-388 3-255 (273)
52 2ifu_A Gamma-SNAP; membrane fu 99.9 2.8E-21 9.6E-26 159.3 26.2 248 28-291 3-253 (307)
53 3mkr_A Coatomer subunit epsilo 99.9 3.4E-22 1.2E-26 162.9 19.9 260 66-390 7-270 (291)
54 1qqe_A Vesicular transport pro 99.9 2.2E-21 7.4E-26 158.8 24.0 223 63-297 42-267 (292)
55 2ifu_A Gamma-SNAP; membrane fu 99.9 3E-21 1E-25 159.2 23.7 248 112-376 3-253 (307)
56 1qqe_A Vesicular transport pro 99.9 7.4E-21 2.5E-25 155.7 25.2 230 15-256 36-268 (292)
57 2q7f_A YRRB protein; TPR, prot 99.9 1E-21 3.5E-26 156.7 18.9 203 56-300 21-223 (243)
58 2q7f_A YRRB protein; TPR, prot 99.9 1.1E-21 3.6E-26 156.6 18.8 219 15-283 22-240 (243)
59 2ho1_A Type 4 fimbrial biogene 99.9 3.6E-20 1.2E-24 148.6 26.8 205 56-300 35-239 (252)
60 1xnf_A Lipoprotein NLPI; TPR, 99.9 9.7E-22 3.3E-26 159.9 17.3 260 21-336 10-269 (275)
61 4abn_A Tetratricopeptide repea 99.9 3.5E-21 1.2E-25 168.2 21.7 219 34-296 79-318 (474)
62 2ho1_A Type 4 fimbrial biogene 99.9 4E-20 1.4E-24 148.3 25.6 207 11-257 31-238 (252)
63 1xnf_A Lipoprotein NLPI; TPR, 99.9 6.2E-21 2.1E-25 155.2 20.9 258 65-378 12-269 (275)
64 3vtx_A MAMA; tetratricopeptide 99.9 2E-20 6.7E-25 142.4 21.8 168 99-300 4-171 (184)
65 4gyw_A UDP-N-acetylglucosamine 99.9 3.9E-21 1.3E-25 174.1 20.5 176 11-220 4-179 (723)
66 2vq2_A PILW, putative fimbrial 99.9 7.7E-20 2.6E-24 143.9 25.5 206 54-299 4-211 (225)
67 2vq2_A PILW, putative fimbrial 99.9 1.7E-19 5.9E-24 141.9 27.5 207 95-342 3-211 (225)
68 3vtx_A MAMA; tetratricopeptide 99.9 2.9E-20 9.8E-25 141.5 22.1 166 58-257 5-170 (184)
69 4gyw_A UDP-N-acetylglucosamine 99.9 7.3E-21 2.5E-25 172.3 21.4 176 53-262 4-179 (723)
70 4abn_A Tetratricopeptide repea 99.9 1.9E-20 6.4E-25 163.6 22.8 221 76-338 79-317 (474)
71 3qky_A Outer membrane assembly 99.9 2.1E-20 7.3E-25 150.6 21.4 212 139-378 12-255 (261)
72 3qky_A Outer membrane assembly 99.9 2E-20 6.8E-25 150.8 20.8 210 12-248 11-252 (261)
73 3n71_A Histone lysine methyltr 99.9 7.1E-21 2.4E-25 164.2 19.0 152 233-385 314-465 (490)
74 3n71_A Histone lysine methyltr 99.9 1.8E-20 6.3E-25 161.6 18.3 153 190-343 313-465 (490)
75 4i17_A Hypothetical protein; T 99.8 1.1E-18 3.8E-23 137.6 22.7 188 59-280 8-224 (228)
76 3e4b_A ALGK; tetratricopeptide 99.8 1.8E-19 6.2E-24 156.4 18.3 295 18-384 37-387 (452)
77 3e4b_A ALGK; tetratricopeptide 99.8 1.1E-19 3.6E-24 157.8 15.1 281 20-383 7-350 (452)
78 4i17_A Hypothetical protein; T 99.8 1.8E-18 6E-23 136.4 19.5 171 100-300 7-210 (228)
79 3gw4_A Uncharacterized protein 99.8 5.2E-18 1.8E-22 131.2 21.2 193 27-236 3-195 (203)
80 3gw4_A Uncharacterized protein 99.8 6.3E-18 2.1E-22 130.7 21.6 194 111-321 3-196 (203)
81 2ooe_A Cleavage stimulation fa 99.8 2.1E-17 7.1E-22 147.1 27.8 206 143-387 273-495 (530)
82 3u3w_A Transcriptional activat 99.8 2.9E-18 1E-22 140.4 20.4 196 13-220 72-271 (293)
83 2qfc_A PLCR protein; TPR, HTH, 99.8 7.4E-18 2.5E-22 138.1 22.0 197 13-219 72-270 (293)
84 2qfc_A PLCR protein; TPR, HTH, 99.8 1.4E-17 4.7E-22 136.5 23.2 197 139-346 72-270 (293)
85 3u3w_A Transcriptional activat 99.8 1.6E-17 5.6E-22 136.0 23.4 194 56-261 73-270 (293)
86 2ooe_A Cleavage stimulation fa 99.8 6.7E-17 2.3E-21 143.9 26.6 318 12-384 9-454 (530)
87 4b4t_Q 26S proteasome regulato 99.8 1.3E-16 4.5E-21 138.5 27.2 242 102-353 6-256 (434)
88 2ond_A Cleavage stimulation fa 99.8 7E-17 2.4E-21 133.2 23.7 223 33-300 33-271 (308)
89 2ond_A Cleavage stimulation fa 99.8 4.2E-17 1.4E-21 134.6 22.4 224 117-387 33-273 (308)
90 2yhc_A BAMD, UPF0169 lipoprote 99.8 9.9E-17 3.4E-21 125.9 21.8 177 16-214 4-212 (225)
91 4b4t_Q 26S proteasome regulato 99.8 1.1E-16 3.6E-21 139.1 24.1 236 19-263 7-251 (434)
92 2yhc_A BAMD, UPF0169 lipoprote 99.8 2.1E-16 7E-21 124.1 22.7 179 59-256 5-212 (225)
93 3qww_A SET and MYND domain-con 99.8 1.4E-17 4.6E-22 141.5 17.0 122 240-362 310-431 (433)
94 3qww_A SET and MYND domain-con 99.8 1E-17 3.6E-22 142.2 16.3 123 197-319 309-431 (433)
95 3as5_A MAMA; tetratricopeptide 99.8 3.7E-17 1.3E-21 124.3 17.9 172 11-216 3-174 (186)
96 3as5_A MAMA; tetratricopeptide 99.8 7.3E-17 2.5E-21 122.7 18.6 169 56-258 6-174 (186)
97 3ro3_A PINS homolog, G-protein 99.8 2.6E-16 9E-21 116.9 20.5 158 11-174 4-161 (164)
98 3qwp_A SET and MYND domain-con 99.8 2E-17 6.9E-22 140.9 15.9 134 235-369 294-427 (429)
99 3urz_A Uncharacterized protein 99.8 2.9E-16 9.9E-21 121.5 21.1 166 100-300 4-187 (208)
100 3ro3_A PINS homolog, G-protein 99.8 4.4E-16 1.5E-20 115.6 21.2 157 53-217 4-160 (164)
101 4ga2_A E3 SUMO-protein ligase 99.8 1.2E-17 4.2E-22 121.8 12.0 147 63-243 2-149 (150)
102 3qwp_A SET and MYND domain-con 99.8 1.8E-17 6.2E-22 141.2 14.7 135 192-326 293-427 (429)
103 4ga2_A E3 SUMO-protein ligase 99.7 1.4E-17 4.8E-22 121.5 12.2 147 21-201 2-149 (150)
104 2pzi_A Probable serine/threoni 99.7 9.5E-18 3.3E-22 152.9 13.7 200 27-261 402-602 (681)
105 2pzi_A Probable serine/threoni 99.7 2E-17 7E-22 150.7 15.6 200 69-303 402-602 (681)
106 3urz_A Uncharacterized protein 99.7 1.5E-16 5E-21 123.2 17.8 165 16-215 4-186 (208)
107 1xi4_A Clathrin heavy chain; a 99.7 1E-15 3.6E-20 142.5 25.8 257 22-386 1055-1311(1630)
108 4gco_A Protein STI-1; structur 99.7 5.6E-16 1.9E-20 109.1 13.8 120 8-151 5-124 (126)
109 4gco_A Protein STI-1; structur 99.7 3E-15 1E-19 105.3 14.8 103 54-172 9-111 (126)
110 1xi4_A Clathrin heavy chain; a 99.7 1.1E-13 3.7E-18 129.3 28.1 257 58-380 1105-1380(1630)
111 1b89_A Protein (clathrin heavy 99.7 9.7E-17 3.3E-21 133.8 7.3 269 17-380 33-307 (449)
112 4f3v_A ESX-1 secretion system 99.7 7.4E-15 2.5E-19 115.8 17.2 209 17-257 8-237 (282)
113 2r5s_A Uncharacterized protein 99.7 3.6E-15 1.2E-19 112.1 15.0 165 100-299 6-173 (176)
114 3rjv_A Putative SEL1 repeat pr 99.7 1.8E-14 6.3E-19 111.6 18.8 175 75-299 3-197 (212)
115 3rjv_A Putative SEL1 repeat pr 99.7 1.6E-14 5.6E-19 111.9 18.4 177 33-257 3-197 (212)
116 3qou_A Protein YBBN; thioredox 99.6 8.9E-15 3E-19 119.1 17.1 169 97-299 114-284 (287)
117 2r5s_A Uncharacterized protein 99.6 1.7E-15 5.7E-20 114.0 10.5 167 16-215 6-173 (176)
118 3gyz_A Chaperone protein IPGC; 99.6 2.2E-14 7.4E-19 103.8 15.7 109 5-129 25-133 (151)
119 3gyz_A Chaperone protein IPGC; 99.6 3.2E-15 1.1E-19 108.2 11.1 103 54-172 32-134 (151)
120 3dra_A Protein farnesyltransfe 99.6 4.6E-13 1.6E-17 108.3 24.3 225 69-341 43-286 (306)
121 4gcn_A Protein STI-1; structur 99.6 3.3E-14 1.1E-18 100.2 15.6 108 97-215 5-112 (127)
122 3qou_A Protein YBBN; thioredox 99.6 2.9E-14 9.9E-19 116.0 17.3 171 139-342 114-284 (287)
123 3dra_A Protein farnesyltransfe 99.6 4.9E-13 1.7E-17 108.1 24.2 226 26-298 42-286 (306)
124 1b89_A Protein (clathrin heavy 99.6 1.5E-15 5.2E-20 126.6 9.6 261 25-386 12-274 (449)
125 4gcn_A Protein STI-1; structur 99.6 4.2E-14 1.4E-18 99.7 15.7 108 55-171 5-112 (127)
126 2vsy_A XCC0866; transferase, g 99.6 1.4E-14 4.6E-19 130.1 15.9 153 71-257 2-157 (568)
127 4f3v_A ESX-1 secretion system 99.6 1.7E-14 5.9E-19 113.7 14.2 208 60-300 9-238 (282)
128 2vsy_A XCC0866; transferase, g 99.6 2.4E-14 8.1E-19 128.6 15.8 153 29-215 2-157 (568)
129 1p5q_A FKBP52, FK506-binding p 99.6 1.8E-14 6E-19 120.0 12.8 163 28-216 125-295 (336)
130 1p5q_A FKBP52, FK506-binding p 99.6 2E-14 7E-19 119.6 12.8 163 70-258 125-295 (336)
131 2fo7_A Synthetic consensus TPR 99.6 3E-13 1E-17 96.6 15.7 131 17-171 2-132 (136)
132 2fo7_A Synthetic consensus TPR 99.5 7.6E-13 2.6E-17 94.5 17.3 131 59-215 2-132 (136)
133 2vgx_A Chaperone SYCD; alterna 99.5 4.8E-13 1.6E-17 97.0 15.0 110 5-130 10-119 (148)
134 2vgx_A Chaperone SYCD; alterna 99.5 1.8E-13 6.1E-18 99.3 12.5 104 54-173 17-120 (148)
135 1a17_A Serine/threonine protei 99.5 6.2E-13 2.1E-17 98.8 15.8 140 13-174 10-149 (166)
136 3upv_A Heat shock protein STI1 99.5 6E-13 2E-17 93.9 14.7 123 13-153 1-123 (126)
137 1a17_A Serine/threonine protei 99.5 1.3E-12 4.5E-17 97.0 17.3 140 56-219 11-150 (166)
138 3upv_A Heat shock protein STI1 99.5 2.4E-12 8.3E-17 90.7 16.8 122 98-239 2-123 (126)
139 1hh8_A P67PHOX, NCF-2, neutrop 99.5 3.3E-13 1.1E-17 104.9 12.9 139 15-172 5-151 (213)
140 2hr2_A Hypothetical protein; a 99.5 1.8E-12 6.2E-17 92.4 15.1 118 57-175 10-135 (159)
141 1hh8_A P67PHOX, NCF-2, neutrop 99.5 6E-13 2.1E-17 103.4 13.7 139 58-215 6-150 (213)
142 2hr2_A Hypothetical protein; a 99.5 2.2E-12 7.6E-17 91.9 15.2 117 15-132 10-134 (159)
143 2fbn_A 70 kDa peptidylprolyl i 99.5 1.9E-13 6.6E-18 104.8 10.5 163 104-290 8-176 (198)
144 3rkv_A Putative peptidylprolyl 99.5 1.6E-12 5.5E-17 96.1 14.5 110 12-129 7-126 (162)
145 2xcb_A PCRH, regulatory protei 99.5 2.1E-12 7.2E-17 93.1 14.8 111 5-131 7-117 (142)
146 2c2l_A CHIP, carboxy terminus 99.5 1.7E-13 5.9E-18 111.0 9.6 194 58-298 4-198 (281)
147 2fbn_A 70 kDa peptidylprolyl i 99.5 2.7E-13 9.1E-18 104.0 10.0 159 20-206 8-176 (198)
148 2xcb_A PCRH, regulatory protei 99.5 6.6E-12 2.3E-16 90.5 16.7 105 54-174 14-118 (142)
149 2lni_A Stress-induced-phosphop 99.5 1.1E-12 3.6E-17 93.5 12.3 126 8-157 8-133 (133)
150 2vyi_A SGTA protein; chaperone 99.5 1.8E-12 6.1E-17 92.0 13.3 126 9-158 5-130 (131)
151 2c2l_A CHIP, carboxy terminus 99.5 1.4E-13 4.8E-18 111.5 7.9 195 15-256 3-198 (281)
152 2vyi_A SGTA protein; chaperone 99.4 6.7E-12 2.3E-16 89.0 15.8 124 53-202 7-130 (131)
153 3dss_A Geranylgeranyl transfer 99.4 4.1E-10 1.4E-14 91.6 27.8 224 68-342 39-304 (331)
154 1wao_1 Serine/threonine protei 99.4 1.4E-13 4.8E-18 120.0 8.0 180 97-302 3-200 (477)
155 3sz7_A HSC70 cochaperone (SGT) 99.4 2E-12 6.9E-17 95.8 12.5 105 10-130 5-109 (164)
156 2lni_A Stress-induced-phosphop 99.4 3E-12 1E-16 91.1 12.8 123 53-201 11-133 (133)
157 3dss_A Geranylgeranyl transfer 99.4 6.3E-10 2.1E-14 90.5 27.2 223 27-299 40-304 (331)
158 3sz7_A HSC70 cochaperone (SGT) 99.4 6.7E-12 2.3E-16 92.9 14.2 104 54-173 7-110 (164)
159 3rkv_A Putative peptidylprolyl 99.4 1.5E-11 5.1E-16 90.9 16.0 130 139-284 8-146 (162)
160 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 6.2E-13 2.1E-17 115.4 9.8 155 70-250 246-407 (457)
161 1wao_1 Serine/threonine protei 99.4 4.1E-13 1.4E-17 117.0 8.5 181 139-345 3-200 (477)
162 3q7a_A Farnesyltransferase alp 99.4 2E-10 6.9E-15 93.8 23.3 245 12-298 50-330 (349)
163 2e2e_A Formate-dependent nitri 99.4 1.8E-12 6.3E-17 97.4 10.7 125 24-172 18-145 (177)
164 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 5.2E-12 1.8E-16 109.7 14.6 143 11-169 263-413 (457)
165 2e2e_A Formate-dependent nitri 99.4 5.9E-12 2E-16 94.6 13.1 122 68-215 20-144 (177)
166 3q7a_A Farnesyltransferase alp 99.4 8.2E-11 2.8E-15 96.1 20.5 241 100-382 54-329 (349)
167 2xev_A YBGF; tetratricopeptide 99.4 2.6E-11 8.8E-16 85.8 15.3 116 18-148 4-119 (129)
168 1na0_A Designed protein CTPR3; 99.4 1.5E-11 5.3E-16 86.2 13.3 118 15-156 8-125 (125)
169 2xev_A YBGF; tetratricopeptide 99.4 3.9E-11 1.3E-15 84.8 15.4 103 60-172 4-106 (129)
170 1elr_A TPR2A-domain of HOP; HO 99.4 6.1E-11 2.1E-15 83.9 16.0 124 99-242 3-126 (131)
171 3q49_B STIP1 homology and U bo 99.4 9.3E-12 3.2E-16 89.1 11.7 105 12-132 5-109 (137)
172 1na0_A Designed protein CTPR3; 99.3 5.2E-11 1.8E-15 83.5 14.8 117 58-200 9-125 (125)
173 1ihg_A Cyclophilin 40; ppiase 99.3 2.7E-11 9.3E-16 101.8 15.3 134 14-163 221-362 (370)
174 1elr_A TPR2A-domain of HOP; HO 99.3 7.2E-11 2.4E-15 83.6 15.3 106 57-171 3-108 (131)
175 3q49_B STIP1 homology and U bo 99.3 1.2E-10 4.1E-15 83.2 15.7 105 96-218 5-109 (137)
176 2dba_A Smooth muscle cell asso 99.3 3.2E-11 1.1E-15 87.5 12.6 105 12-129 24-128 (148)
177 1hxi_A PEX5, peroxisome target 99.3 1.5E-11 5.2E-16 85.6 10.2 97 60-172 19-115 (121)
178 3mv2_B Coatomer subunit epsilo 99.3 7.3E-10 2.5E-14 88.7 20.7 185 100-312 100-290 (310)
179 1ihg_A Cyclophilin 40; ppiase 99.3 1.1E-10 3.8E-15 98.1 16.9 135 141-291 222-362 (370)
180 1hxi_A PEX5, peroxisome target 99.3 1.8E-11 6.3E-16 85.2 10.0 96 18-129 19-114 (121)
181 3mv2_B Coatomer subunit epsilo 99.3 1.1E-09 3.9E-14 87.6 20.7 264 19-357 17-292 (310)
182 1elw_A TPR1-domain of HOP; HOP 99.3 9.3E-11 3.2E-15 81.2 12.9 99 15-129 3-101 (118)
183 2if4_A ATFKBP42; FKBP-like, al 99.3 1.3E-11 4.6E-16 102.6 9.8 145 12-172 175-329 (338)
184 2dba_A Smooth muscle cell asso 99.3 2.1E-10 7.3E-15 83.1 15.1 119 139-280 25-143 (148)
185 4e6h_A MRNA 3'-END-processing 99.3 1.6E-08 5.6E-13 91.1 30.0 232 117-387 326-573 (679)
186 1elw_A TPR1-domain of HOP; HOP 99.3 4.4E-10 1.5E-14 77.8 15.7 113 142-280 4-116 (118)
187 3k9i_A BH0479 protein; putativ 99.2 3.2E-11 1.1E-15 83.6 8.3 90 28-130 2-91 (117)
188 2if4_A ATFKBP42; FKBP-like, al 99.2 4.4E-11 1.5E-15 99.5 8.9 143 55-215 176-328 (338)
189 2kck_A TPR repeat; tetratricop 99.2 1.6E-10 5.5E-15 79.2 9.5 103 97-215 3-106 (112)
190 3k9i_A BH0479 protein; putativ 99.2 2E-10 6.8E-15 79.5 9.8 89 154-257 2-90 (117)
191 1dce_A Protein (RAB geranylger 99.2 3.2E-09 1.1E-13 94.2 19.7 177 70-288 40-244 (567)
192 2kck_A TPR repeat; tetratricop 99.1 6.6E-10 2.2E-14 76.1 10.0 96 188-299 8-106 (112)
193 1zu2_A Mitochondrial import re 99.1 6.4E-10 2.2E-14 79.1 9.9 87 27-129 13-120 (158)
194 1dce_A Protein (RAB geranylger 99.1 2.4E-09 8.2E-14 95.0 15.6 172 116-329 45-243 (567)
195 4e6h_A MRNA 3'-END-processing 99.1 8E-08 2.7E-12 86.6 25.4 230 33-300 326-571 (679)
196 1zu2_A Mitochondrial import re 99.0 8E-10 2.8E-14 78.6 8.4 88 69-172 13-121 (158)
197 1na3_A Designed protein CTPR2; 99.0 4.3E-09 1.5E-13 68.9 10.2 88 11-114 4-91 (91)
198 1na3_A Designed protein CTPR2; 99.0 6.1E-09 2.1E-13 68.2 10.5 86 55-156 6-91 (91)
199 2l6j_A TPR repeat-containing p 99.0 5.7E-10 2E-14 76.3 4.8 99 100-210 4-102 (111)
200 2l6j_A TPR repeat-containing p 99.0 1.2E-09 4.2E-14 74.6 6.5 93 186-294 4-102 (111)
201 2kat_A Uncharacterized protein 98.9 2.1E-08 7.3E-13 68.9 11.3 84 75-174 2-85 (115)
202 2kat_A Uncharacterized protein 98.9 4.7E-08 1.6E-12 67.2 12.2 84 203-302 2-85 (115)
203 3ma5_A Tetratricopeptide repea 98.9 4.6E-08 1.6E-12 65.2 11.5 71 224-302 3-73 (100)
204 3ma5_A Tetratricopeptide repea 98.9 4.2E-08 1.4E-12 65.4 10.9 71 96-174 3-73 (100)
205 1klx_A Cysteine rich protein B 98.9 9.3E-08 3.2E-12 67.9 13.2 109 156-298 9-125 (138)
206 1klx_A Cysteine rich protein B 98.9 4.2E-08 1.4E-12 69.7 11.4 110 200-342 9-126 (138)
207 4g26_A Pentatricopeptide repea 98.8 5.9E-07 2E-11 78.5 18.3 166 190-384 30-204 (501)
208 4g26_A Pentatricopeptide repea 98.7 1.9E-06 6.5E-11 75.3 19.9 167 102-298 28-203 (501)
209 3txn_A 26S proteasome regulato 98.7 8.7E-06 3E-10 67.7 22.1 212 59-286 20-236 (394)
210 2kc7_A BFR218_protein; tetratr 98.6 2E-07 6.7E-12 62.0 8.0 88 62-173 4-92 (99)
211 3txn_A 26S proteasome regulato 98.6 6E-05 2.1E-09 62.8 24.1 212 17-243 20-235 (394)
212 2uy1_A Cleavage stimulation fa 98.6 0.0002 6.7E-09 62.7 28.0 213 117-385 196-414 (493)
213 2kc7_A BFR218_protein; tetratr 98.5 2.4E-07 8.3E-12 61.5 7.2 87 20-130 4-91 (99)
214 2v5f_A Prolyl 4-hydroxylase su 98.5 1E-06 3.5E-11 58.9 10.1 82 17-107 6-87 (104)
215 3ly7_A Transcriptional activat 98.5 2.2E-05 7.5E-10 64.3 17.8 133 20-171 200-339 (372)
216 2v5f_A Prolyl 4-hydroxylase su 98.4 4.9E-06 1.7E-10 55.6 11.4 82 143-235 6-87 (104)
217 3ly7_A Transcriptional activat 98.3 4E-05 1.4E-09 62.7 14.8 131 64-215 202-339 (372)
218 3u64_A Protein TP_0956; tetrat 98.3 0.00073 2.5E-08 53.1 21.1 84 158-257 179-269 (301)
219 3u64_A Protein TP_0956; tetrat 98.2 5.2E-05 1.8E-09 59.5 14.3 101 56-172 150-270 (301)
220 3ffl_A Anaphase-promoting comp 98.2 0.00012 4.2E-09 51.8 14.6 128 143-280 21-165 (167)
221 3bee_A Putative YFRE protein; 98.2 1.8E-05 6.1E-10 51.3 9.6 67 225-299 3-72 (93)
222 3bee_A Putative YFRE protein; 98.2 1.6E-05 5.3E-10 51.6 9.3 68 96-171 2-72 (93)
223 3ffl_A Anaphase-promoting comp 98.2 0.00011 3.7E-09 52.1 13.4 108 18-125 22-147 (167)
224 1pc2_A Mitochondria fission pr 98.1 6.5E-05 2.2E-09 52.9 12.0 69 225-300 29-101 (152)
225 1pc2_A Mitochondria fission pr 98.1 0.00022 7.5E-09 50.2 14.2 69 97-172 29-101 (152)
226 2uy1_A Cleavage stimulation fa 98.1 0.0021 7.1E-08 56.2 23.1 215 76-344 197-415 (493)
227 4b4t_P 26S proteasome regulato 97.8 0.012 4.1E-07 50.6 21.6 217 29-260 29-250 (445)
228 4b4t_P 26S proteasome regulato 97.6 0.024 8.2E-07 48.7 22.7 216 114-345 30-250 (445)
229 4h7y_A Dual specificity protei 97.4 0.0059 2E-07 42.4 11.9 110 8-129 8-123 (161)
230 1nzn_A CGI-135 protein, fissio 97.4 0.0013 4.5E-08 44.5 8.3 76 311-391 34-110 (126)
231 4h7y_A Dual specificity protei 97.3 0.0021 7E-08 44.6 8.6 116 267-392 10-131 (161)
232 1nzn_A CGI-135 protein, fissio 97.2 0.0094 3.2E-07 40.3 11.3 68 226-300 33-104 (126)
233 4b4t_R RPN7, 26S proteasome re 96.9 0.013 4.3E-07 50.2 12.1 110 97-215 128-237 (429)
234 4b4t_R RPN7, 26S proteasome re 96.8 0.076 2.6E-06 45.4 15.6 108 58-172 131-238 (429)
235 3spa_A Mtrpol, DNA-directed RN 96.7 0.043 1.5E-06 51.4 14.0 107 224-341 123-229 (1134)
236 3spa_A Mtrpol, DNA-directed RN 96.6 0.041 1.4E-06 51.5 13.6 103 185-298 126-229 (1134)
237 3o48_A Mitochondria fission 1 96.5 0.0025 8.4E-08 43.3 3.8 73 312-391 40-114 (134)
238 3mkq_A Coatomer beta'-subunit; 96.4 0.086 2.9E-06 49.4 14.8 47 68-127 662-708 (814)
239 1y8m_A FIS1; mitochondria, unk 96.4 0.006 2E-07 42.0 5.0 75 310-391 37-113 (144)
240 3mkq_A Coatomer beta'-subunit; 96.3 0.08 2.7E-06 49.6 14.3 75 146-254 633-707 (814)
241 2ff4_A Probable regulatory pro 95.9 0.26 8.9E-06 41.5 14.0 109 21-137 120-242 (388)
242 2ff4_A Probable regulatory pro 95.8 0.25 8.4E-06 41.6 13.5 107 194-308 123-243 (388)
243 4gns_B Protein CSD3, chitin bi 95.7 0.54 1.8E-05 43.1 15.6 124 154-296 260-397 (754)
244 1y8m_A FIS1; mitochondria, unk 95.6 0.33 1.1E-05 33.5 12.8 68 226-300 37-107 (144)
245 3o48_A Mitochondria fission 1 95.5 0.36 1.2E-05 32.9 11.6 66 99-171 39-107 (134)
246 4b4t_S RPN3, 26S proteasome re 95.1 0.29 1E-05 42.2 11.5 145 25-172 145-300 (523)
247 3lpz_A GET4 (YOR164C homolog); 95.0 1.2 4E-05 36.2 26.8 212 146-370 59-297 (336)
248 3mkq_B Coatomer subunit alpha; 95.0 0.52 1.8E-05 34.1 10.8 101 68-212 15-115 (177)
249 2o8p_A 14-3-3 domain containin 94.7 0.98 3.4E-05 34.1 15.3 60 241-300 138-198 (227)
250 1ya0_A SMG-7 transcript varian 94.5 0.28 9.7E-06 42.5 10.0 63 59-129 153-215 (497)
251 4fhn_B Nucleoporin NUP120; pro 94.5 4 0.00014 40.0 19.8 208 145-368 845-1079(1139)
252 4b4t_S RPN3, 26S proteasome re 94.4 0.14 4.9E-06 44.1 7.8 143 68-215 146-299 (523)
253 3mkq_B Coatomer subunit alpha; 94.0 1.2 4.1E-05 32.3 11.2 101 152-296 15-115 (177)
254 2wpv_A GET4, UPF0363 protein Y 93.9 2 7E-05 34.5 20.4 172 143-343 34-218 (312)
255 1ya0_A SMG-7 transcript varian 92.6 1 3.4E-05 39.2 10.2 63 186-256 152-214 (497)
256 3kae_A CDC27, possible protein 92.4 2.1 7.3E-05 30.5 12.3 98 61-171 36-143 (242)
257 3kae_A CDC27, possible protein 91.1 3.1 0.00011 29.7 12.7 97 190-299 37-143 (242)
258 3lpz_A GET4 (YOR164C homolog); 90.9 5.6 0.00019 32.3 29.2 244 26-284 22-296 (336)
259 1zbp_A Hypothetical protein VP 88.9 7 0.00024 30.5 11.6 122 238-385 7-130 (273)
260 4gns_B Protein CSD3, chitin bi 88.8 14 0.00049 34.0 34.4 88 73-168 300-397 (754)
261 4fhn_B Nucleoporin NUP120; pro 88.5 20 0.00068 35.2 23.0 184 101-301 843-1052(1139)
262 4b4t_O 26S proteasome regulato 87.4 12 0.00041 31.4 16.6 131 204-340 57-196 (393)
263 3efz_A 14-3-3 protein; 14-3-3, 86.2 10 0.00035 29.5 11.8 95 163-257 119-226 (268)
264 4b4t_O 26S proteasome regulato 85.6 15 0.00051 30.8 17.8 136 33-173 56-200 (393)
265 1o9d_A 14-3-3-like protein C; 83.9 13 0.00046 28.8 19.8 55 203-257 152-207 (260)
266 2crb_A Nuclear receptor bindin 83.4 4.9 0.00017 25.1 5.8 38 12-49 11-48 (97)
267 3uzd_A 14-3-3 protein gamma; s 79.3 19 0.00067 27.7 22.0 56 203-258 148-204 (248)
268 3efz_A 14-3-3 protein; 14-3-3, 79.0 21 0.00071 27.8 12.3 56 74-129 168-226 (268)
269 2rpa_A Katanin P60 ATPase-cont 78.2 3.9 0.00013 24.8 4.1 31 19-49 15-45 (78)
270 1zbp_A Hypothetical protein VP 78.0 23 0.00078 27.7 11.7 55 67-129 6-60 (273)
271 2wpv_A GET4, UPF0363 protein Y 77.7 26 0.00089 28.2 26.6 182 26-216 23-218 (312)
272 1o9d_A 14-3-3-like protein C; 77.6 23 0.00078 27.5 17.4 56 286-342 151-207 (260)
273 3re2_A Predicted protein; meni 76.0 31 0.0011 28.2 13.7 57 119-178 276-332 (472)
274 3t5v_B Nuclear mRNA export pro 75.7 13 0.00046 31.8 8.3 100 157-257 141-249 (455)
275 2br9_A 14-3-3E, 14-3-3 protein 75.6 25 0.00084 26.9 21.4 59 159-219 147-206 (234)
276 3ubw_A 14-3-3E, 14-3-3 protein 75.1 27 0.00092 27.1 22.1 56 203-258 173-229 (261)
277 3ubw_A 14-3-3E, 14-3-3 protein 74.9 27 0.00093 27.1 21.0 58 159-218 173-231 (261)
278 2crb_A Nuclear receptor bindin 73.8 14 0.00047 23.1 7.8 40 182-221 11-50 (97)
279 2br9_A 14-3-3E, 14-3-3 protein 73.2 29 0.00098 26.5 22.5 56 203-258 147-203 (234)
280 3uzd_A 14-3-3 protein gamma; s 72.5 31 0.0011 26.6 22.4 58 159-218 148-206 (248)
281 4a5x_A MITD1, MIT domain-conta 72.0 15 0.00051 22.8 8.0 32 144-175 18-49 (86)
282 2rpa_A Katanin P60 ATPase-cont 71.9 7.7 0.00026 23.5 4.3 34 358-391 15-48 (78)
283 4gq2_M Nucleoporin NUP120; bet 71.4 74 0.0025 30.6 13.8 73 100-172 840-927 (950)
284 2w2u_A Hypothetical P60 katani 70.8 16 0.00054 22.5 6.5 28 147-174 24-51 (83)
285 3u84_A Menin; MLL, JUND, ledgf 70.0 48 0.0016 27.8 13.6 58 119-179 298-355 (550)
286 4ady_A RPN2, 26S proteasome re 68.3 85 0.0029 30.0 27.0 174 14-213 411-587 (963)
287 3iqu_A 14-3-3 protein sigma; s 68.0 38 0.0013 25.9 22.7 182 19-218 11-208 (236)
288 3esl_A Checkpoint serine/threo 67.1 36 0.0012 25.2 14.0 86 37-129 58-144 (202)
289 2v6y_A AAA family ATPase, P60 66.1 20 0.00069 22.0 6.6 27 148-174 17-43 (83)
290 4gq4_A Menin; tumor suppressor 65.2 61 0.0021 27.2 13.0 61 118-181 282-342 (489)
291 1wfd_A Hypothetical protein 15 64.8 24 0.00081 22.3 8.0 30 146-175 19-48 (93)
292 3re2_A Predicted protein; meni 64.7 58 0.002 26.7 12.9 71 228-301 255-327 (472)
293 4gq2_M Nucleoporin NUP120; bet 62.6 1.1E+02 0.0038 29.4 12.9 75 267-342 837-926 (950)
294 2cpt_A SKD1 protein, vacuolar 62.5 31 0.0011 22.9 7.5 26 150-175 26-51 (117)
295 2v6y_A AAA family ATPase, P60 62.2 24 0.00084 21.6 5.4 33 16-48 11-43 (83)
296 3t5v_B Nuclear mRNA export pro 61.8 44 0.0015 28.7 8.6 99 103-203 179-282 (455)
297 3ax2_A Mitochondrial import re 61.0 20 0.00069 21.4 4.5 28 145-172 20-47 (73)
298 3ax2_A Mitochondrial import re 59.7 21 0.00073 21.2 4.5 27 274-300 21-47 (73)
299 1qsa_A Protein (soluble lytic 59.3 1E+02 0.0035 27.8 22.6 127 149-298 221-347 (618)
300 1wy6_A Hypothetical protein ST 59.3 41 0.0014 23.3 7.0 53 238-298 101-153 (172)
301 2v6x_A Vacuolar protein sortin 59.1 28 0.00097 21.4 7.7 28 147-174 18-45 (85)
302 2wb7_A PT26-6P; extra chromoso 59.1 67 0.0023 27.7 8.8 56 331-386 450-518 (526)
303 2npm_A 14-3-3 domain containin 57.5 66 0.0022 25.0 21.9 56 159-217 173-229 (260)
304 3u84_A Menin; MLL, JUND, ledgf 57.0 88 0.003 26.3 12.8 53 246-301 297-349 (550)
305 1om2_A Protein (mitochondrial 56.0 35 0.0012 21.6 5.2 27 274-300 24-50 (95)
306 4a5x_A MITD1, MIT domain-conta 55.9 34 0.0011 21.2 8.8 34 16-49 16-49 (86)
307 4gq4_A Menin; tumor suppressor 55.6 93 0.0032 26.2 12.6 71 228-301 262-334 (489)
308 1om2_A Protein (mitochondrial 54.9 11 0.00038 23.8 2.9 32 359-390 24-55 (95)
309 4ady_A RPN2, 26S proteasome re 52.4 1.7E+02 0.0057 28.1 24.8 175 55-256 410-588 (963)
310 2w2u_A Hypothetical P60 katani 52.0 39 0.0013 20.7 6.9 30 190-219 23-52 (83)
311 2o8p_A 14-3-3 domain containin 49.9 82 0.0028 23.9 24.3 181 63-258 11-198 (227)
312 3t5x_A PCI domain-containing p 49.5 78 0.0027 23.5 8.5 61 139-204 11-71 (203)
313 3myv_A SUSD superfamily protei 49.0 29 0.00099 29.8 5.6 35 138-172 186-220 (454)
314 2npm_A 14-3-3 domain containin 48.5 94 0.0032 24.2 22.3 55 203-258 173-228 (260)
315 3iqu_A 14-3-3 protein sigma; s 48.5 89 0.003 23.9 23.2 57 286-343 149-206 (236)
316 2ijq_A Hypothetical protein; s 48.3 34 0.0012 24.3 4.8 68 20-90 36-107 (161)
317 3t5x_A PCI domain-containing p 47.6 60 0.0021 24.1 6.5 60 14-76 12-71 (203)
318 2a9u_A Ubiquitin carboxyl-term 47.6 57 0.0019 22.7 5.7 40 272-313 44-83 (144)
319 2wvi_A Mitotic checkpoint seri 47.5 74 0.0025 22.7 10.5 82 36-129 43-125 (164)
320 2r17_C Vacuolar protein sortin 45.8 1.1E+02 0.0039 24.3 22.6 158 59-220 100-272 (298)
321 3kez_A Putative sugar binding 45.3 31 0.0011 29.7 5.2 35 138-172 192-226 (461)
322 2wb7_A PT26-6P; extra chromoso 44.8 45 0.0015 28.7 5.7 42 287-328 449-490 (526)
323 1wy6_A Hypothetical protein ST 44.8 76 0.0026 22.0 6.8 53 196-256 101-153 (172)
324 2cpt_A SKD1 protein, vacuolar 44.2 68 0.0023 21.3 8.7 36 15-50 17-52 (117)
325 2ijq_A Hypothetical protein; s 43.7 85 0.0029 22.3 7.4 67 147-218 37-107 (161)
326 2xze_A STAM-binding protein; h 43.1 34 0.0012 23.8 4.2 39 272-311 42-80 (146)
327 2a9u_A Ubiquitin carboxyl-term 43.1 81 0.0028 21.9 8.7 42 312-356 42-83 (144)
328 3myv_A SUSD superfamily protei 42.7 57 0.002 28.0 6.5 35 266-300 186-220 (454)
329 4aez_C MAD3, mitotic spindle c 42.7 1.1E+02 0.0037 23.2 10.0 82 36-129 97-179 (223)
330 2vkj_A TM1634; membrane protei 41.0 63 0.0021 20.0 6.9 31 15-45 52-82 (106)
331 3kez_A Putative sugar binding 40.8 63 0.0022 27.8 6.5 34 266-299 192-225 (461)
332 2wvi_A Mitotic checkpoint seri 40.0 99 0.0034 22.0 9.4 82 206-299 43-125 (164)
333 2wm9_A Dedicator of cytokinesi 39.5 1.8E+02 0.0061 24.8 10.8 35 11-45 5-40 (428)
334 4aez_C MAD3, mitotic spindle c 38.4 1.3E+02 0.0044 22.8 11.4 83 206-300 97-180 (223)
335 3mcx_A SUSD superfamily protei 37.4 36 0.0012 29.4 4.5 34 138-171 198-231 (477)
336 4a1g_A Mitotic checkpoint seri 35.9 1.1E+02 0.0038 21.4 8.1 83 35-129 47-130 (152)
337 2wm9_A Dedicator of cytokinesi 35.1 2.1E+02 0.0072 24.3 11.0 28 271-298 12-39 (428)
338 3snx_A SUSD homolog, putative 32.8 73 0.0025 27.4 5.5 33 138-170 187-219 (460)
339 2v6x_A Vacuolar protein sortin 32.1 89 0.003 19.1 8.4 36 14-49 11-46 (85)
340 1wfd_A Hypothetical protein 15 31.8 97 0.0033 19.4 8.1 35 15-49 14-48 (93)
341 2r17_C Vacuolar protein sortin 31.0 2E+02 0.0069 22.9 22.3 148 107-261 106-271 (298)
342 3mcx_A SUSD superfamily protei 30.8 73 0.0025 27.5 5.3 34 266-299 198-231 (477)
343 3snx_A SUSD homolog, putative 29.9 1E+02 0.0035 26.5 5.9 30 185-214 190-219 (460)
344 2xze_A STAM-binding protein; h 28.9 1.5E+02 0.005 20.6 5.7 34 142-175 40-73 (146)
345 3eab_A Spastin; spastin, MIT, 28.5 1.1E+02 0.0038 19.1 4.4 19 326-345 33-51 (89)
346 3lew_A SUSD-like carbohydrate 27.8 1.2E+02 0.004 26.5 6.0 33 139-171 200-232 (495)
347 3esl_A Checkpoint serine/threo 24.9 2.1E+02 0.0073 21.2 17.5 86 207-299 58-144 (202)
348 3lew_A SUSD-like carbohydrate 24.0 1.8E+02 0.0061 25.3 6.5 31 185-215 202-232 (495)
349 3hdx_A SUSD homolog, SUSD supe 23.9 1.6E+02 0.0056 25.4 6.2 31 185-215 196-226 (478)
350 2cwy_A Hypothetical protein TT 23.8 1.4E+02 0.0049 18.7 8.4 65 148-219 7-72 (94)
351 3jq1_A SUSD superfamily protei 23.3 72 0.0025 27.6 3.9 32 139-170 177-208 (481)
352 1zb1_A BRO1 protein; AIP1, BRO 23.1 3.3E+02 0.011 22.7 12.6 34 14-47 121-160 (392)
353 3hdx_A SUSD homolog, SUSD supe 21.6 1.5E+02 0.0053 25.5 5.6 34 138-171 193-226 (478)
354 2yin_A DOCK2, dedicator of cyt 20.8 3.9E+02 0.013 22.8 10.8 111 83-198 20-145 (436)
355 1zb1_A BRO1 protein; AIP1, BRO 20.7 3.7E+02 0.013 22.4 11.6 35 56-90 121-161 (392)
356 3qnk_A Putative lipoprotein; a 20.1 1.7E+02 0.0059 25.6 5.6 32 139-170 179-210 (517)
No 1
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.6e-34 Score=244.72 Aligned_cols=341 Identities=17% Similarity=0.140 Sum_probs=296.0
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcC
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 93 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 93 (394)
..+..+..+|..+...|++++|+.+|++++... +.+.+....++..+|.++...|++++|+.++++++.+.....
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~- 81 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG- 81 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC----cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcc-
Confidence 345667899999999999999999999999872 333445678899999999999999999999999999987753
Q ss_pred CCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC----------------
Q 016124 94 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN---------------- 157 (394)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------------- 157 (394)
+.+....++..+|.++...|++++|+.++++++.+.+.. .+.+....++..+|.++...|+
T Consensus 82 -~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~ 158 (406)
T 3sf4_A 82 -DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEE 158 (406)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHH
T ss_pred -ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhh
Confidence 566778899999999999999999999999999998875 2456677899999999999999
Q ss_pred ----HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHH
Q 016124 158 ----AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLN 233 (394)
Q Consensus 158 ----~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 233 (394)
+++|+.++++++.+.... ++++....++.++|.++...|++++|+.++++++.+..... +.+....++.+
T Consensus 159 a~~~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~ 232 (406)
T 3sf4_A 159 VRDALQAAVDFYEENLSLVTAL----GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERRAYSN 232 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----cCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHH
Confidence 999999999999998764 46677788899999999999999999999999999887643 44556778999
Q ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHH
Q 016124 234 LAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGE 313 (394)
Q Consensus 234 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 313 (394)
+|.++...|++++|+.++++++.+.... ++.+....++..+|.++...|++++|+.++++++.+.... ++.+....
T Consensus 233 la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~ 308 (406)
T 3sf4_A 233 LGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRIGEGR 308 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc--CCcHHHHH
Confidence 9999999999999999999999987664 3445567788999999999999999999999999988775 44566788
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhh
Q 016124 314 ALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKF 375 (394)
Q Consensus 314 ~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 375 (394)
++..+|.++...|+++ +|+.++++++++.... ...+....++..++.++...|+...+.
T Consensus 309 ~~~~la~~~~~~g~~~-~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~ 367 (406)
T 3sf4_A 309 ACWSLGNAYTALGNHD-QAMHFAEKHLEISREV--GDKSGELTARLNLSDLQMVLGLSYSTN 367 (406)
T ss_dssp HHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHTTSCC-
T ss_pred HHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHh--cCCcchhHHHHHHHHHHHHhhHhHHHH
Confidence 8999999999999999 9999999999998875 345778889999999999999875543
No 2
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=1.2e-34 Score=248.45 Aligned_cols=309 Identities=18% Similarity=0.233 Sum_probs=235.4
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
|..+.++..+|.++...|++++|+..|++++.+ .|....++..+|.++...|++++|+..|++++..
T Consensus 64 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----- 130 (388)
T 1w3b_A 64 PLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL--------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY----- 130 (388)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH-----
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHc--------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Confidence 444556666777777777777777777776654 1333445666777777777777777777776664
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.|....++..+|.++...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++++.
T Consensus 131 ---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 199 (388)
T 1w3b_A 131 ---NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLD 199 (388)
T ss_dssp ---CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred ---CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 3445566677777777777777777777777765 34445677788888888888888888888887753
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
|+. ..++.++|.++...|++++|+..+++++.+ .|....++.++|.++...|++++|+..++
T Consensus 200 -------p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 261 (388)
T 1w3b_A 200 -------PNF---LDAYINLGNVLKEARIFDRAVAAYLRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYR 261 (388)
T ss_dssp -------TTC---HHHHHHHHHHHHTTTCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -------CCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 222 345678888888888888888888888775 35556778889999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKL 332 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A 332 (394)
+++.+ .|....++..+|.++...|++++|+..++++++.. |....++..++.++...|+++ +|
T Consensus 262 ~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~-~A 324 (388)
T 1w3b_A 262 RAIEL--------QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC--------PTHADSLNNLANIKREQGNIE-EA 324 (388)
T ss_dssp HHHHT--------CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHTTTCHH-HH
T ss_pred HHHhh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------cccHHHHHHHHHHHHHcCCHH-HH
Confidence 98873 46667788999999999999999999999998753 334557889999999999999 99
Q ss_pred HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHH
Q 016124 333 LELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 333 ~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
+..+++++++ .|+...++..+|.++...|++++|+..|++++++.+..
T Consensus 325 ~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 325 VRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHHHHHHTTS--------CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHhc--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 9999998753 35556788999999999999999999999998876554
No 3
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=100.00 E-value=1.3e-33 Score=241.99 Aligned_cols=309 Identities=17% Similarity=0.178 Sum_probs=264.1
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|....++..+|.++...|++++|..++++++.. .|....++..+|.++...|++++|+..|++++.+
T Consensus 29 ~p~~~~~~~~l~~~~~~~~~~~~a~~~~~~a~~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 96 (388)
T 1w3b_A 29 EPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQ--------NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRL---- 96 (388)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHc----
Confidence 4555567788999999999999999999998875 2455678999999999999999999999999886
Q ss_pred cCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 92 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.|....++..+|.++...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++..
T Consensus 97 ----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 164 (388)
T 1w3b_A 97 ----KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY--------NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIET 164 (388)
T ss_dssp ----CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred ----CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4666778999999999999999999999999876 3445567889999999999999999999999885
Q ss_pred HHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHH
Q 016124 172 IKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLL 251 (394)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 251 (394)
. |+. ..++.++|.++...|++++|+..+++++.+ +|....++..+|.++...|++++|+..+
T Consensus 165 ~-------p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~ 226 (388)
T 1w3b_A 165 Q-------PNF---AVAWSNLGCVFNAQGEIWLAIHHFEKAVTL--------DPNFLDAYINLGNVLKEARIFDRAVAAY 226 (388)
T ss_dssp C-------TTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCTTHHHHHH
T ss_pred C-------CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3 222 446688999999999999999999999885 4566778999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchH
Q 016124 252 RICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTK 331 (394)
Q Consensus 252 ~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 331 (394)
++++.+ .|....++..+|.++...|++++|+..++++++.. |....++..+|.++...|+++ +
T Consensus 227 ~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~-~ 289 (388)
T 1w3b_A 227 LRALSL--------SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ--------PHFPDAYCNLANALKEKGSVA-E 289 (388)
T ss_dssp HHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------SSCHHHHHHHHHHHHHHSCHH-H
T ss_pred HHHHhh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHcCCHH-H
Confidence 999884 45667888999999999999999999999998742 344457899999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Q 016124 332 LLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 332 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
|+..|+++++.. |....++..+|.++...|++++|+..|++++++.+.
T Consensus 290 A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 337 (388)
T 1w3b_A 290 AEDCYNTALRLC--------PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 337 (388)
T ss_dssp HHHHHHHHHHHC--------TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHhhC--------cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 999999999762 334567889999999999999999999999876443
No 4
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=100.00 E-value=1.9e-31 Score=230.38 Aligned_cols=314 Identities=17% Similarity=0.148 Sum_probs=275.0
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
+..+..+..+|..+...|++++|+.+|++++++. ..+......++..+|.++...|++++|+.++++++.+.+...
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG----TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc----ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcc
Confidence 5667778899999999999999999999999872 233345667899999999999999999999999999987753
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC---------------
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN--------------- 157 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------- 157 (394)
+.+....++..+|.++...|++++|+.++++++.+.... .+.+....++..+|.++...|+
T Consensus 121 --~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~ 196 (411)
T 4a1s_A 121 --DRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVK 196 (411)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHH
T ss_pred --CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhh
Confidence 567788899999999999999999999999999998775 3567788899999999999999
Q ss_pred --HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q 016124 158 --AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLA 235 (394)
Q Consensus 158 --~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 235 (394)
+++|+.++++++++.... .+++....++.++|.++...|++++|+.++++++.+..... +......++.++|
T Consensus 197 ~~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la 270 (411)
T 4a1s_A 197 EALTRAVEFYQENLKLMRDL----GDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG--DRAAERRANSNLG 270 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHH
Confidence 999999999999988764 45567778899999999999999999999999999887753 3445667899999
Q ss_pred HHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHH
Q 016124 236 ASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEAL 315 (394)
Q Consensus 236 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 315 (394)
.++...|++++|+.++++++.+.... .+......++..+|.++...|++++|+.++++++.+.... .+.+....++
T Consensus 271 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~ 346 (411)
T 4a1s_A 271 NSHIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARAC 346 (411)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHH
Confidence 99999999999999999999987765 3344567788999999999999999999999999998776 4556777889
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHHHh
Q 016124 316 DCLVSIQTRLGEDDTKLLELLKRVLRIQER 345 (394)
Q Consensus 316 ~~l~~~~~~~g~~~~~A~~~~~~al~~~~~ 345 (394)
..+|.++...|+++ +|..++++++++.++
T Consensus 347 ~~la~~~~~~g~~~-~A~~~~~~al~~~~~ 375 (411)
T 4a1s_A 347 WSLGNAHSAIGGHE-RALKYAEQHLQLAXX 375 (411)
T ss_dssp HHHHHHHHHTTCHH-HHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHhccHH-HHHHHHHHHHHHHhh
Confidence 99999999999999 999999999998655
No 5
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=100.00 E-value=2.8e-31 Score=229.35 Aligned_cols=317 Identities=15% Similarity=0.084 Sum_probs=276.1
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhh
Q 016124 55 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 134 (394)
Q Consensus 55 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 134 (394)
+.....+..+|..+...|++++|+..|+++++.. ..+......++..+|.++...|++++|+.++++++.+.+..
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~- 119 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAG----TEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM- 119 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc----ccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-
Confidence 5667778899999999999999999999999871 12222345789999999999999999999999999998775
Q ss_pred CCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC-------------
Q 016124 135 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR------------- 201 (394)
Q Consensus 135 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------- 201 (394)
.+.+....++..+|.++...|++++|+.++++++++.... .+.+....++.++|.++...|+
T Consensus 120 -~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 194 (411)
T 4a1s_A 120 -NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL----GDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDD 194 (411)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHH
T ss_pred -cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh----hchHHHHHHHHHHHHHHHHcCcccccccchhhhhh
Confidence 3567888999999999999999999999999999998764 4567778889999999999999
Q ss_pred ----hHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHH
Q 016124 202 ----GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLG 277 (394)
Q Consensus 202 ----~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 277 (394)
+++|+.++++++.+..... +.+....++.++|.++...|++++|+.++++++.+.... .+......++..+|
T Consensus 195 a~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la 270 (411)
T 4a1s_A 195 VKEALTRAVEFYQENLKLMRDLG--DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLG 270 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHH
Confidence 9999999999999887664 456677899999999999999999999999999987764 33445566889999
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHH
Q 016124 278 ITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLT 357 (394)
Q Consensus 278 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 357 (394)
.++...|++++|+.++++++.+.... .+......++..+|.++...|+++ +|+.++++++.+.... .+.+....+
T Consensus 271 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~~~~--~~~~~~~~~ 345 (411)
T 4a1s_A 271 NSHIFLGQFEDAAEHYKRTLALAVEL--GEREVEAQSCYSLGNTYTLLHEFN-TAIEYHNRHLAIAQEL--GDRIGEARA 345 (411)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHH--TCHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHC--CChHHHHHH
Confidence 99999999999999999999998765 445566788999999999999999 9999999999998775 345677889
Q ss_pred HHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHH
Q 016124 358 LKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQ 390 (394)
Q Consensus 358 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 390 (394)
+..+|.++...|++++|..+|++++.+.++.+.
T Consensus 346 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 378 (411)
T 4a1s_A 346 CWSLGNAHSAIGGHERALKYAEQHLQLAXXXXX 378 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999887764
No 6
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.6e-31 Score=227.15 Aligned_cols=313 Identities=15% Similarity=0.109 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC
Q 016124 57 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE 136 (394)
Q Consensus 57 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 136 (394)
.+..+...|..+...|++++|+.++++++... +.+.+....++..+|.++...|++++|+.++++++.+.+.. .
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~ 81 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--G 81 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--T
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC----cccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--c
Confidence 34567889999999999999999999999871 22223346789999999999999999999999999998775 3
Q ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC---------------
Q 016124 137 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR--------------- 201 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~--------------- 201 (394)
+.+....++..+|.++...|++++|+.++++++++.+.. ++++....++.++|.++...|+
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 157 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPE 157 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc----ccccchHHHHHHHHHHHHHcCCcccccccchhhhhhh
Confidence 567788899999999999999999999999999998764 4556677889999999999999
Q ss_pred -----hHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHH
Q 016124 202 -----GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHL 276 (394)
Q Consensus 202 -----~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 276 (394)
+++|+.++++++.+..... +.+....++.++|.++...|++++|+.++++++.+.... ++.+....++..+
T Consensus 158 ~a~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l 233 (406)
T 3sf4_A 158 EVRDALQAAVDFYEENLSLVTALG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNL 233 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHH
Confidence 9999999999999887753 456778899999999999999999999999999987764 3445566789999
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHH
Q 016124 277 GITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVML 356 (394)
Q Consensus 277 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 356 (394)
|.++...|++++|+.++++++.+.... ++++....++..+|.++...|+++ +|+.++++++++.... .+.+....
T Consensus 234 a~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~~~~--~~~~~~~~ 308 (406)
T 3sf4_A 234 GNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYE-KAIDYHLKHLAIAQEL--NDRIGEGR 308 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHT--TCHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHhc--CCcHHHHH
Confidence 999999999999999999999988764 455666788999999999999999 9999999999988774 34567788
Q ss_pred HHHHHHHHHHHhcCchhhhhhHHHHHHHHHHH
Q 016124 357 TLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 357 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
++..+|.++...|++++|..++++++.+.++.
T Consensus 309 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 340 (406)
T 3sf4_A 309 ACWSLGNAYTALGNHDQAMHFAEKHLEISREV 340 (406)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999997665
No 7
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=100.00 E-value=1e-30 Score=219.67 Aligned_cols=313 Identities=15% Similarity=0.112 Sum_probs=267.7
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
...+...|..+...|++++|+..+++++... ..+.+....++..+|.++...|++++|+.++++++.+.+.. .+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~ 78 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GD 78 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhC----cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--cc
Confidence 3456778999999999999999999999871 12223346789999999999999999999999999998775 35
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC----------------
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR---------------- 201 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---------------- 201 (394)
.+....++..+|.++...|++++|+.++++++++.+.. ++++....++..+|.++...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL----NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPED 154 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh----cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhh
Confidence 67778899999999999999999999999999998764 4566677888999999999999
Q ss_pred ----hHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHH
Q 016124 202 ----GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLG 277 (394)
Q Consensus 202 ----~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 277 (394)
+++|+.++++++.+..... +.+....++..+|.++...|++++|+.++++++.+.... ++.+....++..+|
T Consensus 155 a~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~ 230 (338)
T 3ro2_A 155 VRNALQAAVDLYEENLSLVTALG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLG 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHH
Confidence 9999999999998877654 456677889999999999999999999999999987765 34455667899999
Q ss_pred HHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHH
Q 016124 278 ITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLT 357 (394)
Q Consensus 278 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 357 (394)
.++...|++++|+.++++++.+.... ++++....++..+|.++...|+++ +|+.++++++.+.... .+.+....+
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~~~~--~~~~~~~~~ 305 (338)
T 3ro2_A 231 NAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYE-KAIDYHLKHLAIAQEL--KDRIGEGRA 305 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHH--TCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHhc--CCcHHHHHH
Confidence 99999999999999999999988764 455666788999999999999999 9999999999988775 335677788
Q ss_pred HHHHHHHHHHhcCchhhhhhHHHHHHHHHHHH
Q 016124 358 LKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYK 389 (394)
Q Consensus 358 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 389 (394)
+..+|.++...|++++|..++++++.+.++.+
T Consensus 306 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 337 (338)
T 3ro2_A 306 CWSLGNAYTALGNHDQAMHFAEKHLEISREVG 337 (338)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988765
No 8
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=100.00 E-value=1.4e-30 Score=218.73 Aligned_cols=311 Identities=19% Similarity=0.167 Sum_probs=268.7
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
...+...|..+...|++++|+.+|+++++.. +.+.+....++..+|.++...|++++|+.++++++.+..... +
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~ 78 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVG----TEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIG--D 78 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----CSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhC----cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccc--c
Confidence 4567889999999999999999999999862 333445678899999999999999999999999999987763 5
Q ss_pred CcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC------------------
Q 016124 96 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN------------------ 157 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~------------------ 157 (394)
.+....++..+|.++...|++++|+.++++++.+.+.. .+.+....++..+|.++...|+
T Consensus 79 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~ 156 (338)
T 3ro2_A 79 QLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVR 156 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHH
Confidence 56778899999999999999999999999999998774 3456677889999999999999
Q ss_pred --HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q 016124 158 --AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLA 235 (394)
Q Consensus 158 --~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 235 (394)
+++|+.++++++.+.+.. ++.+....++.++|.++...|++++|+.++++++.+..... +.+....++..+|
T Consensus 157 ~~~~~A~~~~~~a~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~l~ 230 (338)
T 3ro2_A 157 NALQAAVDLYEENLSLVTAL----GDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERRAYSNLG 230 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHH
Confidence 999999999999988764 45667778889999999999999999999999999887753 4455677899999
Q ss_pred HHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHH
Q 016124 236 ASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEAL 315 (394)
Q Consensus 236 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 315 (394)
.++...|++++|+.++++++.+.... .+.+....++..+|.++...|++++|..++++++.+.... .+.+....++
T Consensus 231 ~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~ 306 (338)
T 3ro2_A 231 NAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRIGEGRAC 306 (338)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhh--cchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--CCcHHHHHHH
Confidence 99999999999999999999987664 3445567788999999999999999999999999998775 3456677889
Q ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHHHh
Q 016124 316 DCLVSIQTRLGEDDTKLLELLKRVLRIQER 345 (394)
Q Consensus 316 ~~l~~~~~~~g~~~~~A~~~~~~al~~~~~ 345 (394)
..+|.++...|+++ +|..++++++++.++
T Consensus 307 ~~la~~~~~~g~~~-~A~~~~~~a~~~~~~ 335 (338)
T 3ro2_A 307 WSLGNAYTALGNHD-QAMHFAEKHLEISRE 335 (338)
T ss_dssp HHHHHHHHHHTCHH-HHHHHHHHHHHC---
T ss_pred HHHHHHHHHcCChH-HHHHHHHHHHHHHHh
Confidence 99999999999999 999999999987654
No 9
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=241.76 Aligned_cols=350 Identities=11% Similarity=0.022 Sum_probs=226.3
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK-TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
++..+.+++.+|.++..+|++++|+.+|++++++.+...+. .+|..+.++.++|.+|..+|++++|+.++++++.+.+.
T Consensus 47 ~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 47 REFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp ---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 44456778999999999999999999999999998765432 35667788999999999999999999999999999988
Q ss_pred hcCCCCcchHhhhHhHHHHHHHh--CcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPLFSLGSLFIKE--GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKA 168 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~--g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 168 (394)
..++..+..+.++..+|.++... +++++|+.+|++++.+ .|+++.....+..+...+...++.++|+..++++
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~a 201 (472)
T 4g1t_A 127 FSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQA 201 (472)
T ss_dssp SCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 87777777888899999887765 4799999999999987 3344433222222222234456666667666666
Q ss_pred HHHHHhcc-------------------------------cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 169 LRVIKDSN-------------------------------YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 169 ~~~~~~~~-------------------------------~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
+++..... ...++. ..++.++|.+|...|++++|+..++++++.
T Consensus 202 l~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-- 276 (472)
T 4g1t_A 202 IRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGV---TDVLRSAAKFYRRKDEPDKAIELLKKALEY-- 276 (472)
T ss_dssp HHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccH---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh--
Confidence 65421100 001111 223455666666666666666666666653
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcc-------------------cHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSK-------------------NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGI 278 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g-------------------~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 278 (394)
+|....++.++|.+|...+ .+++|+..+++++.+ +|....++..+|.
T Consensus 277 ------~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~lg~ 342 (472)
T 4g1t_A 277 ------IPNNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKADEA--------NDNLFRVCSILAS 342 (472)
T ss_dssp ------STTCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHHHHH--------CTTTCCCHHHHHH
T ss_pred ------CCChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHHhhc--------CCchhhhhhhHHH
Confidence 3445555666666654321 233444444444432 3455566788999
Q ss_pred HHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHH-HHhCCCchHHHHHHHHHHHHHHh------------
Q 016124 279 TLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQ-TRLGEDDTKLLELLKRVLRIQER------------ 345 (394)
Q Consensus 279 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~A~~~~~~al~~~~~------------ 345 (394)
++...|++++|+.+|++++.+. +++......+..+|.+. ...|+++ +|+..|++++++...
T Consensus 343 ~~~~~~~~~~A~~~~~kaL~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~Ai~~y~kal~i~~~~~~~~~~~~~l~ 416 (472)
T 4g1t_A 343 LHALADQYEEAEYYFQKEFSKE-----LTPVAKQLLHLRYGNFQLYQMKCED-KAIHHFIEGVKINQKSREKEKMKDKLQ 416 (472)
T ss_dssp HHHHTTCHHHHHHHHHHHHHSC-----CCHHHHHHHHHHHHHHHHHTSSCHH-HHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHhcC-----CCChHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 9999999999999999998743 33333344566677654 4678888 999999999865211
Q ss_pred -----hcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHhh
Q 016124 346 -----EFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQKV 392 (394)
Q Consensus 346 -----~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 392 (394)
.+ ..+|..+.++..+|.+|...|++++|+++|++++++.+......
T Consensus 417 ~~~~~~l-~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~~~~~p~a~ 467 (472)
T 4g1t_A 417 KIAKMRL-SKNGADSEALHVLAFLQELNEKMQQADEDSERGLESGSLIPSAS 467 (472)
T ss_dssp HHHHHHH-HHCC-CTTHHHHHHHHHHHHHHCC--------------------
T ss_pred HHHHHHH-HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcHh
Confidence 11 11345567899999999999999999999999999988876543
No 10
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=100.00 E-value=2e-31 Score=233.07 Aligned_cols=320 Identities=16% Similarity=0.131 Sum_probs=261.3
Q ss_pred ccCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Q 016124 7 SLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVIT 86 (394)
Q Consensus 7 ~l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 86 (394)
.+-..+|..+..+..+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..++++++
T Consensus 17 ~~~~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 88 (450)
T 2y4t_A 17 NLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDG--------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQ 88 (450)
T ss_dssp ------CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 334567888899999999999999999999999999875 233467889999999999999999999999998
Q ss_pred HHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHH------------HHHHHHHHHH
Q 016124 87 ILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA------------MCSLAHAKCA 154 (394)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~------------~~~la~~~~~ 154 (394)
. .|....++..+|.++...|++++|+..|++++.. .++.+....+ +..+|.++..
T Consensus 89 ~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~ 155 (450)
T 2y4t_A 89 L--------KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS-----NPSENEEKEAQSQLIKSDEMQRLRSQALNAFG 155 (450)
T ss_dssp H--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 4556788999999999999999999999999875 2233311122 4455888999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Q 016124 155 NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNL 234 (394)
Q Consensus 155 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 234 (394)
.|++++|+..++++++... .. ..++..+|.++...|++++|+..+++++... |....++..+
T Consensus 156 ~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------~~~~~~~~~l 217 (450)
T 2y4t_A 156 SGDYTAAIAFLDKILEVCV-------WD---AELRELRAECFIKEGEPRKAISDLKAASKLK--------NDNTEAFYKI 217 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH--------CSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCC-------CC---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------CCCHHHHHHH
Confidence 9999999999999998632 22 3456889999999999999999999998762 4456789999
Q ss_pred HHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHH------------HHHHHHhhcChHHHHHHHHHHHHHHHH
Q 016124 235 AASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLH------------LGITLYHLNRDKEAEKLVLEALYIREI 302 (394)
Q Consensus 235 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~------------la~~~~~~g~~~~A~~~~~~a~~~~~~ 302 (394)
|.++...|++++|+..+++++.+ .|.....+.. +|.++...|++++|+.+|++++.+.
T Consensus 218 ~~~~~~~g~~~~A~~~~~~~~~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-- 287 (450)
T 2y4t_A 218 STLYYQLGDHELSLSEVRECLKL--------DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE-- 287 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh--------CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--
Confidence 99999999999999999999874 2333333333 3999999999999999999998853
Q ss_pred HcCCCChhH-HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHH
Q 016124 303 AFGKDSLPV-GEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRL 381 (394)
Q Consensus 303 ~~~~~~~~~-~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 381 (394)
++++.. ...+..+|.++...|+++ +|+..+++++++ .|....++..+|.++...|++++|...|+++
T Consensus 288 ---p~~~~~~~~~~~~l~~~~~~~g~~~-~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 355 (450)
T 2y4t_A 288 ---PSIAEYTVRSKERICHCFSKDEKPV-EAIRVCSEVLQM--------EPDNVNALKDRAEAYLIEEMYDEAIQDYETA 355 (450)
T ss_dssp ---CSSHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ---CcchHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHh--------CcccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 444432 567889999999999999 999999999975 2344578999999999999999999999999
Q ss_pred HHHHHH
Q 016124 382 SNLRMK 387 (394)
Q Consensus 382 ~~~~~~ 387 (394)
+++.++
T Consensus 356 l~~~p~ 361 (450)
T 2y4t_A 356 QEHNEN 361 (450)
T ss_dssp HTTSSS
T ss_pred HHhCcc
Confidence 887554
No 11
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=100.00 E-value=9.8e-31 Score=221.75 Aligned_cols=315 Identities=15% Similarity=0.125 Sum_probs=258.5
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
+..+..+|..+...|++++|+..|++++... |....++..+|.++...|++++|+..+++++..
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-------- 66 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDGD--------PDNYIAYYRRATVFLAMGKSKAALPDLTKVIAL-------- 66 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------cccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------
Confidence 4678899999999999999999999999852 334568899999999999999999999999987
Q ss_pred CcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH------------HHHHHHCCCHHHHHH
Q 016124 96 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSL------------AHAKCANGNAEEAVE 163 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l------------a~~~~~~g~~~~A~~ 163 (394)
.|....++..+|.++...|++++|+..+++++... +.......++..+ |.++...|++++|+.
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~ 141 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSN-----PSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAIT 141 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcC-----CcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 45556889999999999999999999999998752 1000333344433 899999999999999
Q ss_pred HHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHccc
Q 016124 164 LYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKN 243 (394)
Q Consensus 164 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 243 (394)
.++++++..+ +. ..++..+|.++...|++++|+..+++++.. .|....++..+|.++...|+
T Consensus 142 ~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~ 203 (359)
T 3ieg_A 142 FLDKILEVCV-------WD---AELRELRAECFIKEGEPRKAISDLKAASKL--------KSDNTEAFYKISTLYYQLGD 203 (359)
T ss_dssp HHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CSCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCC-------Cc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCC
Confidence 9999998632 22 345688999999999999999999999864 45667889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcchHH---------HHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChh-HHH
Q 016124 244 FVEAERLLRICLDIMTKTVGPDDQSISFP---------MLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLP-VGE 313 (394)
Q Consensus 244 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~---------~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~ 313 (394)
+++|+..+++++... ++++..... ...+|.++...|++++|+..+++++... ++.+. ...
T Consensus 204 ~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~~ 273 (359)
T 3ieg_A 204 HELSLSEVRECLKLD-----QDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTE-----PSVAEYTVR 273 (359)
T ss_dssp HHHHHHHHHHHHHHC-----TTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CSSHHHHHH
T ss_pred HHHHHHHHHHHHhhC-----ccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCchHHHHH
Confidence 999999999999742 232222211 2345889999999999999999998854 44433 335
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHH
Q 016124 314 ALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 314 ~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
.+..+|.++...|+++ +|+..++++++. .|....++..+|.++...|++++|...|++++++.++.
T Consensus 274 ~~~~la~~~~~~~~~~-~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 274 SKERICHCFSKDEKPV-EAIRICSEVLQM--------EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HHHHHHHHHHHTTCHH-HHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHccCHH-HHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 6778999999999999 999999999986 23346688999999999999999999999999877654
No 12
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-28 Score=208.98 Aligned_cols=352 Identities=8% Similarity=0.015 Sum_probs=270.8
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH--HHHHHHhhchhHHH-----------H
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM--AKVLGSIGRAKKAV-----------E 79 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l--~~~~~~~g~~~~A~-----------~ 79 (394)
+.......+-.......+++++|...++++.+..... ..++... .++.+ .+.....+.+..+. .
T Consensus 9 ~~~v~~~l~~w~~~i~~~~~~~A~~l~~~i~~~~~~~--~~~~~~~-~y~~ll~~r~~~~~~~~~~~~~~~~e~~~~~~~ 85 (383)
T 3ulq_A 9 SSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQM--EEDQDLH-LYYSLMEFRHNLMLEYLEPLEKMRIEEQPRLSD 85 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS--CCCHHHH-HHHHHHHHHHHHHHHHHGGGGGSCGGGSCCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh--ccchHHH-HHHHHHHHHHHHHHhhcCcccccccccccchhh
Confidence 3344444555666778999999999999987765432 1223333 22222 22333445555555 5
Q ss_pred HHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHH
Q 016124 80 IYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAE 159 (394)
Q Consensus 80 ~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 159 (394)
.+++.-...... +.......++..|.++...|++++|+.++++++.+.+.. ++.+..+.++..+|.+|...|+++
T Consensus 86 ~~~~i~~~~~~~---~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~ 160 (383)
T 3ulq_A 86 LLLEIDKKQARL---TGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTY 160 (383)
T ss_dssp HHHHHHHHTHHH---HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhcCCCc---hhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHH
Confidence 555432221110 011112345568999999999999999999999886653 455668899999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q 016124 160 EAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS 239 (394)
Q Consensus 160 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 239 (394)
+|+.++++++++.++. +...+....++.++|.++...|++++|+.++++++.+.+... +.+..+.++.++|.+|.
T Consensus 161 ~A~~~~~~al~~~~~~---~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 161 FSMDYARQAYEIYKEH---EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--QPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp HHHHHHHHHHHHHHTC---STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC---ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHH
Confidence 9999999999999874 233677788999999999999999999999999999987753 45667789999999999
Q ss_pred HcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 016124 240 RSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLV 319 (394)
Q Consensus 240 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 319 (394)
..|++++|+.++++++.+.... .+.|....++.++|.++...|++++|..++++++.+.... +.+.....+..++
T Consensus 236 ~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~ 310 (383)
T 3ulq_A 236 SQSQYEDAIPYFKRAIAVFEES--NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA---GDVIYLSEFEFLK 310 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHT--TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhh--ccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHH
Confidence 9999999999999999987765 2226778899999999999999999999999999998775 3344444477899
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHH
Q 016124 320 SIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYK 389 (394)
Q Consensus 320 ~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 389 (394)
.++...|+. ..+++++..+++. ...+....++..+|.+|...|++++|..+|++++.+.+++.
T Consensus 311 ~~~~~~~~~-----~~~~~al~~~~~~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~i~ 373 (383)
T 3ulq_A 311 SLYLSGPDE-----EAIQGFFDFLESK--MLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQ 373 (383)
T ss_dssp HHHTSSCCH-----HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTSCS
T ss_pred HHHhCCCcH-----HHHHHHHHHHHHC--cCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhh
Confidence 999998873 3556666666654 45678888999999999999999999999999999887643
No 13
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.98 E-value=4.9e-29 Score=225.87 Aligned_cols=324 Identities=12% Similarity=0.043 Sum_probs=257.3
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHh------------------------------------------
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY------------------------------------------ 50 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~------------------------------------------ 50 (394)
+....+++.+|.+|...|++++|+..|++++.......
T Consensus 197 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 276 (597)
T 2xpi_A 197 KLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAKCYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYM 276 (597)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCchhhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHH
Confidence 45678899999999999999999999999986521100
Q ss_pred ---------------------CCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHH
Q 016124 51 ---------------------GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSL 109 (394)
Q Consensus 51 ---------------------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~ 109 (394)
....|....++..++.++...|++++|+..|++++.. .|....++..++.+
T Consensus 277 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~ 348 (597)
T 2xpi_A 277 LKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKADTLFVRSRFIDVLAITTKILEI--------DPYNLDVYPLHLAS 348 (597)
T ss_dssp TTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCCTTHHHHHHH
T ss_pred HHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHc--------CcccHHHHHHHHHH
Confidence 0000122445666777777788888888888777754 23345567777888
Q ss_pred HHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHH
Q 016124 110 FIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMR 189 (394)
Q Consensus 110 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 189 (394)
+...|++++|...+++++.. .|....++..+|.+|...|++++|+.+|++++++.. .. ..++
T Consensus 349 ~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-------~~---~~~~ 410 (597)
T 2xpi_A 349 LHESGEKNKLYLISNDLVDR--------HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDP-------QF---GPAW 410 (597)
T ss_dssp HHHHTCHHHHHHHHHHHHHH--------CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHH
T ss_pred HHHhCCHHHHHHHHHHHHhh--------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-------CC---HHHH
Confidence 88888888888888777754 234456788899999999999999999999988532 22 3456
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSI 269 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 269 (394)
..++.++...|++++|+..|++++.. .|....++..+|.++...|++++|+.+|+++++. .|..
T Consensus 411 ~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~ 474 (597)
T 2xpi_A 411 IGFAHSFAIEGEHDQAISAYTTAARL--------FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYAL--------FQYD 474 (597)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHT--------TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CCCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Confidence 88999999999999999999998864 3344567889999999999999999999999874 3445
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChh-HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcC
Q 016124 270 SFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLP-VGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFG 348 (394)
Q Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~ 348 (394)
..++..+|.++...|++++|+..|+++++..... +..|. ...++..++.++...|+++ +|+..++++++..
T Consensus 475 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~-~A~~~~~~~~~~~----- 546 (597)
T 2xpi_A 475 PLLLNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYD-AAIDALNQGLLLS----- 546 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHS-----
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHhC-----
Confidence 6788999999999999999999999999876543 23344 3788999999999999999 9999999999752
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHH
Q 016124 349 SESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYK 389 (394)
Q Consensus 349 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 389 (394)
|....++..++.+|...|++++|..+|++++++.++..
T Consensus 547 ---p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 547 ---TNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp ---SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred ---CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 33357889999999999999999999999999876543
No 14
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.98 E-value=1.4e-29 Score=226.58 Aligned_cols=325 Identities=14% Similarity=0.100 Sum_probs=257.7
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHH---------
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYH--------- 82 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~--------- 82 (394)
+|....++..+|.++...|++++|+..+++++.+. |....++..+|.++...|++++|+..|+
T Consensus 55 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 126 (537)
T 3fp2_A 55 DPNEPVFYSNISACYISTGDLEKVIEFTTKALEIK--------PDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFD 126 (537)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHC------
T ss_pred CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--------CchHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCC
Confidence 34556778889999999999999999999998762 3445678899999999999999988763
Q ss_pred --------------------------------------------------------------------------------
Q 016124 83 -------------------------------------------------------------------------------- 82 (394)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (394)
T Consensus 127 ~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 206 (537)
T 3fp2_A 127 GASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSA 206 (537)
T ss_dssp -----CHHHHHHHHHHHHHHHHHCC-------CCCCCHHHHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHhHHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHh
Confidence
Q ss_pred -------------HHHHHHHHhcC--CCCcc----hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHH
Q 016124 83 -------------RVITILELNRG--TESAD----LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM 143 (394)
Q Consensus 83 -------------~al~~~~~~~~--~~~~~----~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 143 (394)
+++..+++... ++++. .+.++..+|.++...|++++|+..+++++.. .|. ..
T Consensus 207 ~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~--------~~~-~~ 277 (537)
T 3fp2_A 207 TDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINL--------HPT-PN 277 (537)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCC-HH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhc--------CCC-ch
Confidence 22222222211 11111 2446788899999999999999999999886 233 56
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCC
Q 016124 144 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKE 223 (394)
Q Consensus 144 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 223 (394)
++..+|.++...|++++|+.+++++++... +. ..++..+|.++...|++++|+..+++++..
T Consensus 278 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-------- 339 (537)
T 3fp2_A 278 SYIFLALTLADKENSQEFFKFFQKAVDLNP-------EY---PPTYYHRGQMYFILQDYKNAKEDFQKAQSL-------- 339 (537)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHhccCC-------CC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------
Confidence 788999999999999999999999998642 22 345688999999999999999999999885
Q ss_pred CccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Q 016124 224 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIA 303 (394)
Q Consensus 224 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 303 (394)
.|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++......
T Consensus 340 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 411 (537)
T 3fp2_A 340 NPENVYPYIQLACLLYKQGKFTESEAFFNETKLK--------FPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQ 411 (537)
T ss_dssp CTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcc
Confidence 2344467889999999999999999999999984 35556788999999999999999999999999987543
Q ss_pred cCCCChhHHHHHHHHHHHHHHh----------CCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchh
Q 016124 304 FGKDSLPVGEALDCLVSIQTRL----------GEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEE 373 (394)
Q Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~----------g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 373 (394)
+........+..++.++... |+++ +|+..|+++++. .|....++..+|.++...|++++
T Consensus 412 --~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~-~A~~~~~~a~~~--------~p~~~~~~~~l~~~~~~~g~~~~ 480 (537)
T 3fp2_A 412 --EKIHVGIGPLIGKATILARQSSQDPTQLDEEKFN-AAIKLLTKACEL--------DPRSEQAKIGLAQLKLQMEKIDE 480 (537)
T ss_dssp --SSCSSTTHHHHHHHHHHHHHHTC----CCHHHHH-HHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHH
T ss_pred --hhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHH-HHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhccHHH
Confidence 12222233467788899998 9999 999999999986 23345778999999999999999
Q ss_pred hhhhHHHHHHHHHHHHH
Q 016124 374 KFPLKKRLSNLRMKYKQ 390 (394)
Q Consensus 374 A~~~~~~a~~~~~~~~~ 390 (394)
|..+|++++++.+....
T Consensus 481 A~~~~~~al~~~~~~~~ 497 (537)
T 3fp2_A 481 AIELFEDSAILARTMDE 497 (537)
T ss_dssp HHHHHHHHHHHC--CHH
T ss_pred HHHHHHHHHHhCCCcHH
Confidence 99999999998776544
No 15
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.97 E-value=7.5e-30 Score=216.84 Aligned_cols=298 Identities=15% Similarity=0.113 Sum_probs=231.4
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
+++.....++.+|..+...|++++|+.+|++++... |....++..+|.++...|++++|+..|++++.+
T Consensus 60 ~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--- 128 (365)
T 4eqf_A 60 NPFKDWPGAFEEGLKRLKEGDLPVTILFMEAAILQD--------PGDAEAWQFLGITQAENENEQAAIVALQRCLEL--- 128 (365)
T ss_dssp CTTTTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CcccchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--------cCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc---
Confidence 333445668899999999999999999999999862 344678899999999999999999999999987
Q ss_pred hcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCch--HHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG--RVGMAMCSLAHAKCANGNAEEAVELYKKA 168 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~a 168 (394)
.|....++..+|.++...|++++|+.++++++.+.+........ .....+..+|.++...|++++|+.+++++
T Consensus 129 -----~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 203 (365)
T 4eqf_A 129 -----QPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEA 203 (365)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 45567889999999999999999999999999874432111000 12344566799999999999999999999
Q ss_pred HHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHH
Q 016124 169 LRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAE 248 (394)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 248 (394)
++.... ... ..++.++|.++...|++++|+.++++++.. .|....++.++|.++...|++++|+
T Consensus 204 l~~~p~-----~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~ 267 (365)
T 4eqf_A 204 AHQNGD-----MID---PDLQTGLGVLFHLSGEFNRAIDAFNAALTV--------RPEDYSLWNRLGATLANGDRSEEAV 267 (365)
T ss_dssp HHHSCS-----SCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhCcC-----ccC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 987422 002 345688999999999999999999999986 3556778999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChh----HHHHHHHHHHHHHH
Q 016124 249 RLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLP----VGEALDCLVSIQTR 324 (394)
Q Consensus 249 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~----~~~~~~~l~~~~~~ 324 (394)
..|++++.+ +|....++..+|.++...|++++|+.++++++.+.....++.++. ...++..++.++..
T Consensus 268 ~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (365)
T 4eqf_A 268 EAYTRALEI--------QPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSL 339 (365)
T ss_dssp HHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHH
T ss_pred HHHHHHHhc--------CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHH
Confidence 999999985 466688999999999999999999999999999885543332221 25678899999999
Q ss_pred hCCCchHHHHHHHHHHHHHHhhcCC
Q 016124 325 LGEDDTKLLELLKRVLRIQEREFGS 349 (394)
Q Consensus 325 ~g~~~~~A~~~~~~al~~~~~~~~~ 349 (394)
.|+.+ .+....++.++.+.+.++.
T Consensus 340 ~g~~~-~a~~~~~~~l~~~~~~~~~ 363 (365)
T 4eqf_A 340 MDQPE-LFQAANLGDLDVLLRAFNL 363 (365)
T ss_dssp HTCHH-HHHHHHTTCCGGGTTTTTC
T ss_pred cCcHH-HHHHHHHhhHHHHHHhcCC
Confidence 99998 8888887777666555443
No 16
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.97 E-value=2.6e-29 Score=224.70 Aligned_cols=322 Identities=17% Similarity=0.173 Sum_probs=262.5
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
+..+..+..+|..++..|++++|+..|++++... |....++..+|.++...|++++|+..+++++..
T Consensus 22 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~----- 88 (537)
T 3fp2_A 22 QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELD--------PNEPVFYSNISACYISTGDLEKVIEFTTKALEI----- 88 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhC--------CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----
Confidence 4467889999999999999999999999999862 344578999999999999999999999999987
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHH------------------------------------------------
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFS------------------------------------------------ 124 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~------------------------------------------------ 124 (394)
.|....++..+|.++...|++++|+..|+
T Consensus 89 ---~p~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~ 165 (537)
T 3fp2_A 89 ---KPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNENLSKDEGRGSQVLPSNT 165 (537)
T ss_dssp ---CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHC-----------CHHHHHHHHHHHHHHHHHCC-------CCCCCHH
T ss_pred ---CCchHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHhCccccccccchHh
Confidence 45667889999999999999999988763
Q ss_pred ------------------------------------------------------HHHHHHHHhhC--CCchH----HHHH
Q 016124 125 ------------------------------------------------------RILKIYTKVYG--ENDGR----VGMA 144 (394)
Q Consensus 125 ------------------------------------------------------~al~~~~~~~~--~~~~~----~~~~ 144 (394)
+++..+++... ++++. .+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~ 245 (537)
T 3fp2_A 166 SLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSANTVDDPLRENAALA 245 (537)
T ss_dssp HHHHHHHTSCHHHHHHTSCCCCSSCSSHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHH
T ss_pred HHHHHHHhcChHHHHHHHhhccccccHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHHHHHH
Confidence 12222222211 22222 2556
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCC
Q 016124 145 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEH 224 (394)
Q Consensus 145 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 224 (394)
+..+|.++...|++++|+..+++++... ++ ..++..+|.++...|++++|+.++++++.. .
T Consensus 246 ~~~~g~~~~~~~~~~~A~~~~~~~~~~~-------~~----~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~ 306 (537)
T 3fp2_A 246 LCYTGIFHFLKNNLLDAQVLLQESINLH-------PT----PNSYIFLALTLADKENSQEFFKFFQKAVDL--------N 306 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CC----HHHHHHHHHHTCCSSCCHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHhcC-------CC----chHHHHHHHHHHHhcCHHHHHHHHHHHhcc--------C
Confidence 8889999999999999999999999852 23 345688999999999999999999999875 3
Q ss_pred ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHc
Q 016124 225 PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAF 304 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 304 (394)
|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++...
T Consensus 307 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~---- 374 (537)
T 3fp2_A 307 PEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSL--------NPENVYPYIQLACLLYKQGKFTESEAFFNETKLKF---- 374 (537)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----
Confidence 556678999999999999999999999999984 34556788999999999999999999999998863
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHh----------cCchhh
Q 016124 305 GKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKL----------GRKEEK 374 (394)
Q Consensus 305 ~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A 374 (394)
++ ...++..+|.++...|+++ +|+..|+++++....... .......+..+|.++... |++++|
T Consensus 375 -~~---~~~~~~~l~~~~~~~g~~~-~A~~~~~~a~~~~~~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~A 447 (537)
T 3fp2_A 375 -PT---LPEVPTFFAEILTDRGDFD-TAIKQYDIAKRLEEVQEK--IHVGIGPLIGKATILARQSSQDPTQLDEEKFNAA 447 (537)
T ss_dssp -TT---CTHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHCSS--CSSTTHHHHHHHHHHHHHHTC----CCHHHHHHH
T ss_pred -CC---ChHHHHHHHHHHHHhCCHH-HHHHHHHHHHHcCCcchh--hHHHHHHHHHHHHHHHHHhhccchhhhHhHHHHH
Confidence 33 3457889999999999999 999999999998755322 112234467788899999 999999
Q ss_pred hhhHHHHHHHHHHH
Q 016124 375 FPLKKRLSNLRMKY 388 (394)
Q Consensus 375 ~~~~~~a~~~~~~~ 388 (394)
+.+|++++.+.+..
T Consensus 448 ~~~~~~a~~~~p~~ 461 (537)
T 3fp2_A 448 IKLLTKACELDPRS 461 (537)
T ss_dssp HHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhCCCC
Confidence 99999999876543
No 17
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.97 E-value=9.9e-30 Score=213.04 Aligned_cols=298 Identities=12% Similarity=0.150 Sum_probs=246.0
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
...+..+|..++..|++++|+..+++++... |....++..++.++...|++++|+..+++++..
T Consensus 22 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~--------p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-------- 85 (330)
T 3hym_B 22 LDVVVSLAERHYYNCDFKMCYKLTSVVMEKD--------PFHASCLPVHIGTLVELNKANELFYLSHKLVDL-------- 85 (330)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHh--------
Confidence 3457789999999999999999999998752 233445667889999999999999999999886
Q ss_pred CcchHhhhHhHHHHHHHhC-cHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 96 SADLVLPLFSLGSLFIKEG-KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|....++..+|.++...| ++++|+.++++++.. .|....++..+|.++...|++++|+..++++++....
T Consensus 86 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 157 (330)
T 3hym_B 86 YPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTL--------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG 157 (330)
T ss_dssp CTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTT--------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT
T ss_pred CcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc
Confidence 4556678999999999999 999999999999875 3444567889999999999999999999999987532
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 016124 175 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 254 (394)
Q Consensus 175 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 254 (394)
. ..++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+..++++
T Consensus 158 -------~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 219 (330)
T 3hym_B 158 -------C---HLPMLYIGLEYGLTNNSKLAERFFSQALSI--------APEDPFVMHEVGVVAFQNGEWKTAEKWFLDA 219 (330)
T ss_dssp -------C---SHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -------c---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 1 233567999999999999999999999874 4556788999999999999999999999999
Q ss_pred HHHHHhhcCCCC-CcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHH
Q 016124 255 LDIMTKTVGPDD-QSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLL 333 (394)
Q Consensus 255 ~~~~~~~~~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~ 333 (394)
+.+......... +....++..+|.++...|++++|+.+++++++.. |....++..+|.++...|+++ +|+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~g~~~-~A~ 290 (330)
T 3hym_B 220 LEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI--------PQNASTYSAIGYIHSLMGNFE-NAV 290 (330)
T ss_dssp HHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCSHHHHHHHHHHHHHTCHH-HHH
T ss_pred HHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC--------ccchHHHHHHHHHHHHhccHH-HHH
Confidence 997765433222 5567789999999999999999999999999864 334457899999999999999 999
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH-HHhcCch
Q 016124 334 ELLKRVLRIQEREFGSESEEVMLTLKKVVSYL-DKLGRKE 372 (394)
Q Consensus 334 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~-~~~g~~~ 372 (394)
.++++++++ .|+...++..++.++ ...|+.+
T Consensus 291 ~~~~~al~~--------~p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 291 DYFHTALGL--------RRDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp HHHHTTTTT--------CSCCHHHHHHHHHHHHTTTTC--
T ss_pred HHHHHHHcc--------CCCchHHHHHHHHHHHHHhCchh
Confidence 999998864 233456788889888 4555543
No 18
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.97 E-value=1.9e-30 Score=220.76 Aligned_cols=319 Identities=16% Similarity=0.085 Sum_probs=243.2
Q ss_pred HHHHHhhhchHHHHH-HHHHHHHHHHHHhCCchH-HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchH
Q 016124 23 GSMYSTLENYEKSML-VYQRVINVLESRYGKTSI-LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 100 (394)
Q Consensus 23 ~~~~~~~g~~~~A~~-~~~~al~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 100 (394)
+.++...|++++|+. .|++++.+. ++.| .....+..+|.++...|++++|+..+++++.. .|...
T Consensus 32 ~~~~~~~~~~~~a~~~~~~~a~~~~-----~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~ 98 (368)
T 1fch_A 32 AEAHPWLSDYDDLTSATYDKGYQFE-----EENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQ--------DPKHM 98 (368)
T ss_dssp --------------CHHHHCCCCCC-----SSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCH
T ss_pred chhhHHHHHHHHHHhhhhhHHHhcC-----CCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCH
Confidence 346777899999999 888887652 2222 23456788999999999999999999999875 45667
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCC
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSL 180 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 180 (394)
.++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++...........
T Consensus 99 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~ 170 (368)
T 1fch_A 99 EAWQYLGTTQAENEQELLAISALRRCLEL--------KPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVT 170 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHH
Confidence 88999999999999999999999999987 3444568899999999999999999999999986432100000
Q ss_pred c------hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCcc--HHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 181 D------DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS--FVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 181 ~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
. ..........++.++ ..|++++|+..+++++.. .|. ...++..+|.++...|++++|+..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~~~~~~a~~~--------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 241 (368)
T 1fch_A 171 PAEEGAGGAGLGPSKRILGSLL-SDSLFLEVKELFLAAVRL--------DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFT 241 (368)
T ss_dssp ---------------CTTHHHH-HHHHHHHHHHHHHHHHHH--------STTSCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhhhhcccHHHHHHHHHh-hcccHHHHHHHHHHHHHh--------CcCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 0 000011112466666 899999999999999875 233 56788999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKL 332 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A 332 (394)
+++.+ .|....++..+|.++...|++++|+..+++++.+. |....++..+|.++...|+++ +|
T Consensus 242 ~al~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~g~~~-~A 304 (368)
T 1fch_A 242 AALSV--------RPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQ--------PGYIRSRYNLGISCINLGAHR-EA 304 (368)
T ss_dssp HHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHH-HH
T ss_pred HHHHh--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHCCCHH-HH
Confidence 99985 35567789999999999999999999999998853 444568899999999999999 99
Q ss_pred HHHHHHHHHHHHhhcCC---CCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHH
Q 016124 333 LELLKRVLRIQEREFGS---ESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 333 ~~~~~~al~~~~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
+..|++++.+.....++ .++....++..+|.++...|++++|..+++++++..++.
T Consensus 305 ~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~ 363 (368)
T 1fch_A 305 VEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTM 363 (368)
T ss_dssp HHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHh
Confidence 99999999987653221 122336789999999999999999999999999876654
No 19
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-28 Score=203.92 Aligned_cols=287 Identities=21% Similarity=0.240 Sum_probs=235.2
Q ss_pred cccccCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHH
Q 016124 4 IVDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHR 83 (394)
Q Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 83 (394)
..+..++++|..+.++..+|.++...|++++|+.++++++.+.....+++.+....++..+|.++...|++++|+.++++
T Consensus 15 ~~q~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 94 (311)
T 3nf1_A 15 YFQGGGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLND 94 (311)
T ss_dssp SCSSSCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cccCCCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999998887777889999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHH
Q 016124 84 VITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVE 163 (394)
Q Consensus 84 al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 163 (394)
++.+.+...+.+.+....++..+|.++...|++++|+.++++++.+.....+++++....++..+|.++...|++++|+.
T Consensus 95 al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 174 (311)
T 3nf1_A 95 ALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEY 174 (311)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999888777788899999999999999999999999999999999888778889999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhh-CCCCccH------HHHHHHHHH
Q 016124 164 LYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYK-GKEHPSF------VTHLLNLAA 236 (394)
Q Consensus 164 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~-~~~~~~~------~~~~~~la~ 236 (394)
++++++++.... .+++++....++..+|.++...|++++|+.++++++....... +...+.. ...+..++.
T Consensus 175 ~~~~a~~~~~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3nf1_A 175 YYQRALEIYQTK--LGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKG 252 (311)
T ss_dssp HHHHHHHHHHHT--SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcC
Confidence 999999998764 4455677778889999999999999999999999998765432 1111111 222333444
Q ss_pred HHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 237 SYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 237 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
.+...+.+.+|...+.++.. .+|....++..+|.+|...|++++|+.++++++++.
T Consensus 253 ~~~~~~~~~~a~~~~~~~~~--------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 253 KQKDGTSFGEYGGWYKACKV--------DSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp -----CCSCCCC-----------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHhhcCC--------CCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 44555566666666666554 467788899999999999999999999999999875
No 20
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.97 E-value=9.7e-28 Score=204.98 Aligned_cols=272 Identities=8% Similarity=-0.004 Sum_probs=231.3
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..++..|..+...|++++|+.++++++.+.+.. ++.+..+.++..+|.++...|++++|+.++.+++++.+.. +...
T Consensus 104 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~ 180 (383)
T 3ulq_A 104 YFNFFRGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYN 180 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccch
Confidence 345668999999999999999999999886653 2455678899999999999999999999999999998875 2226
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+..+.++.++|.+|...|++++|+.++++++++.++. ++++....++.++|.+|...|++++|+.++++++.+.+.
T Consensus 181 ~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~ 256 (383)
T 3ulq_A 181 IRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE----KQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEE 256 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Confidence 7788899999999999999999999999999998864 567777889999999999999999999999999999876
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
.. +.|....++.++|.++...|++++|..++++++.+.... .++.....+..+|.++...|++ ..+++++.
T Consensus 257 ~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~~~~~~~~~~----~~~~~al~ 327 (383)
T 3ulq_A 257 SN--ILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKA---GDVIYLSEFEFLKSLYLSGPDE----EAIQGFFD 327 (383)
T ss_dssp TT--CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH---TCHHHHHHHHHHHHHHTSSCCH----HHHHHHHH
T ss_pred hc--cchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhCCCcH----HHHHHHHH
Confidence 53 237778999999999999999999999999999988765 2334444467899999999995 44555555
Q ss_pred HHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCC
Q 016124 299 IREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGS 349 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~ 349 (394)
..++. ...+....++..+|.++...|+++ +|..++++++++.+++...
T Consensus 328 ~~~~~--~~~~~~~~~~~~la~~y~~~g~~~-~A~~~~~~al~~~~~i~~~ 375 (383)
T 3ulq_A 328 FLESK--MLYADLEDFAIDVAKYYHERKNFQ-KASAYFLKVEQVRQLIQGG 375 (383)
T ss_dssp HHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHTSCSSC
T ss_pred HHHHC--cCHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHhhcc
Confidence 55554 456777888999999999999999 9999999999998876543
No 21
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.2e-28 Score=217.57 Aligned_cols=325 Identities=14% Similarity=0.079 Sum_probs=267.0
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
...+..+..+|..++..|++++|+..|++++... ++ ..++..+|.++...|++++|+..++++++.
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~----- 68 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELK-----ED----PVFYSNLSACYVSVGDLKKVVEMSTKALEL----- 68 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----cc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-----
Confidence 3567889999999999999999999999999862 22 567889999999999999999999999986
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh-----------------------h---------------
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV-----------------------Y--------------- 134 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-----------------------~--------------- 134 (394)
.|....++..+|.++...|++++|+..|++++...... .
T Consensus 69 ---~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 145 (514)
T 2gw1_A 69 ---KPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELST 145 (514)
T ss_dssp ---CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHHHHHHHHHHHTTC----------------
T ss_pred ---ChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 46677899999999999999999999999987642100 0
Q ss_pred ---------CC------------------------CchHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHhcccC
Q 016124 135 ---------GE------------------------NDGRVGMAMCSLAHAKCA---NGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 135 ---------~~------------------------~~~~~~~~~~~la~~~~~---~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
.+ ..|.....+..+|.++.. .|++++|+..++++++..+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 225 (514)
T 2gw1_A 146 QPAKERKDKQENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDK 225 (514)
T ss_dssp -----------CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred ChhhHHHhhccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhcc
Confidence 00 001225566777887776 899999999999999954322101
Q ss_pred CCc----hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 016124 179 SLD----DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 254 (394)
Q Consensus 179 ~~~----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 254 (394)
.++ .+....++..+|.++...|++++|+..+++++.. .|. ..++..+|.++...|++++|+..++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~--------~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~ 296 (514)
T 2gw1_A 226 NNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIEL--------FPR-VNSYIYMALIMADRNDSTEYYNYFDKA 296 (514)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHH--------CCC-HHHHHHHHHHHHTSSCCTTGGGHHHHH
T ss_pred CccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh--------Ccc-HHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 122 2566778899999999999999999999999875 344 788999999999999999999999999
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHH
Q 016124 255 LDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLE 334 (394)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~ 334 (394)
+.. .|....++..+|.++...|++++|+..+++++... +. ...++..+|.++...|+++ +|+.
T Consensus 297 ~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-----~~---~~~~~~~l~~~~~~~~~~~-~A~~ 359 (514)
T 2gw1_A 297 LKL--------DSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELD-----PE---NIFPYIQLACLAYRENKFD-DCET 359 (514)
T ss_dssp HTT--------CTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTC-----SS---CSHHHHHHHHHTTTTTCHH-HHHH
T ss_pred hhc--------CcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----hh---hHHHHHHHHHHHHHcCCHH-HHHH
Confidence 873 45567788999999999999999999999998743 33 3457889999999999999 9999
Q ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHH
Q 016124 335 LLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 335 ~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
.++++++.. |....++..+|.++...|++++|+.+|++++.+.+..
T Consensus 360 ~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 405 (514)
T 2gw1_A 360 LFSEAKRKF--------PEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKL 405 (514)
T ss_dssp HHHHHHHHS--------TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHc--------ccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 999998752 2234678899999999999999999999999887654
No 22
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.4e-28 Score=202.81 Aligned_cols=285 Identities=22% Similarity=0.220 Sum_probs=233.6
Q ss_pred cCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 92 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.++++|....++..+|.++...|++++|+.++++++.+.....+++.+....++..+|.++...|++++|+.++++++.+
T Consensus 19 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 98 (311)
T 3nf1_A 19 GGYEIPARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAI 98 (311)
T ss_dssp SCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 35678888999999999999999999999999999999988877778899999999999999999999999999999998
Q ss_pred HHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHH
Q 016124 172 IKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLL 251 (394)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 251 (394)
.+.. .+++++....++.++|.++...|++++|+.++++++.+.....+.+++....++..+|.++...|++++|+.++
T Consensus 99 ~~~~--~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 176 (311)
T 3nf1_A 99 REKT--LGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYY 176 (311)
T ss_dssp HHHH--HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHH--hCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 7664 33456777888999999999999999999999999999988877788899999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH-cCCCChh------HHHHHHHHHHHHHH
Q 016124 252 RICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIA-FGKDSLP------VGEALDCLVSIQTR 324 (394)
Q Consensus 252 ~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~-~~~~~~~------~~~~~~~l~~~~~~ 324 (394)
++++.+.....+++++....++..+|.++...|++++|+.++++++...... ++...+. ....+..++..+..
T Consensus 177 ~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3nf1_A 177 QRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKD 256 (311)
T ss_dssp HHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC------
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhh
Confidence 9999998888777788889999999999999999999999999999876542 1111111 12334444555556
Q ss_pred hCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Q 016124 325 LGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 325 ~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
.+.+. +|...++++.. .+|....++..+|.+|...|++++|..+|++++++.++
T Consensus 257 ~~~~~-~a~~~~~~~~~--------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 257 GTSFG-EYGGWYKACKV--------DSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp -CCSC-CCC-----------------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHH-HHHHHHhhcCC--------CCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 66666 66666766653 56888999999999999999999999999999998754
No 23
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.97 E-value=3.2e-27 Score=201.25 Aligned_cols=341 Identities=12% Similarity=0.036 Sum_probs=258.6
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH--HHHHhhchhHHH---------HHHHHHHHHHHHhcC
Q 016124 25 MYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAK--VLGSIGRAKKAV---------EIYHRVITILELNRG 93 (394)
Q Consensus 25 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~--~~~~~g~~~~A~---------~~~~~al~~~~~~~~ 93 (394)
.+...+++++|...++++........ .++... .++.+-. .....+.+..+. ..+++.-......
T Consensus 21 ~~i~~~~~~~A~~l~~~i~~~~~~~~--~~~~~~-~yy~l~~~r~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~-- 95 (378)
T 3q15_A 21 KMIRQFSVPDAEILKAEVEQDIQQME--EDQDLL-IYYSLMCFRHQLMLDYLEPGKTYGNRPTVTELLETIETPQKKL-- 95 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHGGGBC--CCHHHH-HHHHHHHHHHHHHHHTCCC--------CHHHHHHHHHGGGHHH--
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHhc--ccHHHH-HHHHHHHHHHHHHHhhcCcccccccccchHHHHHHHhccCCCC--
Confidence 34789999999999998866543321 222322 3333222 222334444443 4444322111110
Q ss_pred CCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 94 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
++......++..|..+...|++++|+.+|++++.+.... ++.+..+.++.++|.+|...|++++|+.++++++++.+
T Consensus 96 -~~~l~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 172 (378)
T 3q15_A 96 -TGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFV--SDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQ 172 (378)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhC--CChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 112223356778999999999999999999999887653 35677889999999999999999999999999999988
Q ss_pred hcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHH
Q 016124 174 DSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRI 253 (394)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 253 (394)
+. +...+....++.++|.++...|++++|+.++++++.+.+... +.+..+.++.++|.+|...|++++|+.++++
T Consensus 173 ~~---~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~ 247 (378)
T 3q15_A 173 NH---PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--NDRFIAISLLNIANSYDRSGDDQMAVEHFQK 247 (378)
T ss_dssp TS---TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hC---CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 63 223556788899999999999999999999999999987653 3456778899999999999999999999999
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHH
Q 016124 254 CLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLL 333 (394)
Q Consensus 254 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~ 333 (394)
++.+.... .+|....++..+|.++...|++++|..++++++.+.... +.+.....+..++.++...|+.
T Consensus 248 al~~~~~~---~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~~ly~~~~~~----- 316 (378)
T 3q15_A 248 AAKVSREK---VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR---SHKFYKELFLFLQAVYKETVDE----- 316 (378)
T ss_dssp HHHHHHHH---CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT---CCSCHHHHHHHHHHHHSSSCCH-----
T ss_pred HHHHHHhh---CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhCCCcH-----
Confidence 99988765 345568899999999999999999999999999987543 2344444567788888777762
Q ss_pred HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHh
Q 016124 334 ELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQK 391 (394)
Q Consensus 334 ~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 391 (394)
..+.+++..+++. ...+.....+..+|.+|...|++++|..+|++++.+.+++.+.
T Consensus 317 ~~~~~al~~~~~~--~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~~~~~~~~ 372 (378)
T 3q15_A 317 RKIHDLLSYFEKK--NLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKG 372 (378)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--CChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 3455566555552 4567788889999999999999999999999999999987653
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.97 E-value=6.8e-29 Score=210.94 Aligned_cols=288 Identities=14% Similarity=0.002 Sum_probs=227.2
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
.....++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++.+
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------ 128 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQ--------DPGDAEAWQFLGITQAENENEQAAIVALQRCLEL------ 128 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc------
Confidence 33456889999999999999999999999987 4566788999999999999999999999999987
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.|....++..+|.++...|++++|+.++++++++.................+..+|.++...|++++|+.++++++..
T Consensus 129 --~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 206 (365)
T 4eqf_A 129 --QPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQ 206 (365)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 344467899999999999999999999999999754320000000012334566799999999999999999999986
Q ss_pred HHHhhCCCCcc--HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHH
Q 016124 216 TEKYKGKEHPS--FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLV 293 (394)
Q Consensus 216 ~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 293 (394)
.|. ...++..+|.++...|++++|+..+++++.+ .|....++..+|.++...|++++|+..+
T Consensus 207 --------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 270 (365)
T 4eqf_A 207 --------NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV--------RPEDYSLWNRLGATLANGDRSEEAVEAY 270 (365)
T ss_dssp --------SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred --------CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 233 5678899999999999999999999999985 4556788999999999999999999999
Q ss_pred HHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHH----HHHHHHHHHHHHHHhc
Q 016124 294 LEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEE----VMLTLKKVVSYLDKLG 369 (394)
Q Consensus 294 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~----~~~~~~~la~~~~~~g 369 (394)
++++.+. |....++..+|.++...|+++ +|+.+|++++++.....++.++. ...++..++.++...|
T Consensus 271 ~~al~~~--------p~~~~~~~~l~~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 341 (365)
T 4eqf_A 271 TRALEIQ--------PGFIRSRYNLGISCINLGAYR-EAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMD 341 (365)
T ss_dssp HHHHHHC--------TTCHHHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHT
T ss_pred HHHHhcC--------CCchHHHHHHHHHHHHCCCHH-HHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcC
Confidence 9999863 444678999999999999999 99999999999987755443322 3578899999999999
Q ss_pred CchhhhhhHHHHHHH
Q 016124 370 RKEEKFPLKKRLSNL 384 (394)
Q Consensus 370 ~~~~A~~~~~~a~~~ 384 (394)
+.+.+....++.+..
T Consensus 342 ~~~~a~~~~~~~l~~ 356 (365)
T 4eqf_A 342 QPELFQAANLGDLDV 356 (365)
T ss_dssp CHHHHHHHHTTCCGG
T ss_pred cHHHHHHHHHhhHHH
Confidence 999998887775543
No 25
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-29 Score=221.03 Aligned_cols=288 Identities=13% Similarity=0.067 Sum_probs=237.3
Q ss_pred HHHHHHHHHHHHH---hhchhHHHHHHHHHHHHHHHhc--CCCC----cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHH
Q 016124 58 VTSLLGMAKVLGS---IGRAKKAVEIYHRVITILELNR--GTES----ADLVLPLFSLGSLFIKEGKAVDAESVFSRILK 128 (394)
Q Consensus 58 ~~~~~~l~~~~~~---~g~~~~A~~~~~~al~~~~~~~--~~~~----~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 128 (394)
...+..+|.++.. .|++++|+..+++++...+... .+++ |....++..+|.++...|++++|+..+++++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~ 265 (514)
T 2gw1_A 186 ADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKFLKNDPLGAHEDIKKAIE 265 (514)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 5566777777776 8999999999999998654433 2222 56778999999999999999999999999998
Q ss_pred HHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHH
Q 016124 129 IYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGREL 208 (394)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 208 (394)
. .|. ..++..+|.++...|++++|+..+++++... +.. ..++..+|.++...|++++|+..
T Consensus 266 ~--------~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-------~~~---~~~~~~l~~~~~~~~~~~~A~~~ 326 (514)
T 2gw1_A 266 L--------FPR-VNSYIYMALIMADRNDSTEYYNYFDKALKLD-------SNN---SSVYYHRGQMNFILQNYDQAGKD 326 (514)
T ss_dssp H--------CCC-HHHHHHHHHHHHTSSCCTTGGGHHHHHHTTC-------TTC---THHHHHHHHHHHHTTCTTHHHHH
T ss_pred h--------Ccc-HHHHHHHHHHHHHCCCHHHHHHHHHHHhhcC-------cCC---HHHHHHHHHHHHHhCCHHHHHHH
Confidence 6 233 7789999999999999999999999998753 222 23568899999999999999999
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHH
Q 016124 209 LEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKE 288 (394)
Q Consensus 209 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 288 (394)
+++++.. .|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++
T Consensus 327 ~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~ 390 (514)
T 2gw1_A 327 FDKAKEL--------DPENIFPYIQLACLAYRENKFDDCETLFSEAKRK--------FPEAPEVPNFFAEILTDKNDFDK 390 (514)
T ss_dssp HHHHHHT--------CSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHH--------STTCSHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHh--------ChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------cccCHHHHHHHHHHHHHCCCHHH
Confidence 9999874 3444568889999999999999999999999874 34456788999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH---hCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 016124 289 AEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR---LGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYL 365 (394)
Q Consensus 289 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 365 (394)
|+..+++++...... +.......++..+|.++.. .|+++ +|+..+++++... |....++..+|.++
T Consensus 391 A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~-~A~~~~~~a~~~~--------~~~~~~~~~la~~~ 459 (514)
T 2gw1_A 391 ALKQYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFI-EATNLLEKASKLD--------PRSEQAKIGLAQMK 459 (514)
T ss_dssp HHHHHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHH-HHHHHHHHHHHHC--------TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHH-HHHHHHHHHHHhC--------cccHHHHHHHHHHH
Confidence 999999999876321 1111123478899999999 99999 9999999999852 33456788999999
Q ss_pred HHhcCchhhhhhHHHHHHHHHHHHHh
Q 016124 366 DKLGRKEEKFPLKKRLSNLRMKYKQK 391 (394)
Q Consensus 366 ~~~g~~~~A~~~~~~a~~~~~~~~~~ 391 (394)
...|++++|...|++++.+.++....
T Consensus 460 ~~~g~~~~A~~~~~~a~~~~~~~~~~ 485 (514)
T 2gw1_A 460 LQQEDIDEAITLFEESADLARTMEEK 485 (514)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSSHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhccccHHH
Confidence 99999999999999999988765543
No 26
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.97 E-value=1.4e-28 Score=209.24 Aligned_cols=287 Identities=17% Similarity=0.168 Sum_probs=236.0
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
...++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..+++++..
T Consensus 64 ~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-------- 127 (368)
T 1fch_A 64 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQ--------DPKHMEAWQYLGTTQAENEQELLAISALRRCLEL-------- 127 (368)
T ss_dssp CSSHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhc--------
Confidence 556789999999999999999999999875 2344567889999999999999999999999987
Q ss_pred CcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHH-------------HHHHHHHHHHHHHCCCHHHHH
Q 016124 96 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRV-------------GMAMCSLAHAKCANGNAEEAV 162 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-------------~~~~~~la~~~~~~g~~~~A~ 162 (394)
.|....++..+|.++...|++++|+..+++++.... +.+.. ......++.++ ..|++++|+
T Consensus 128 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~A~ 201 (368)
T 1fch_A 128 KPDNQTALMALAVSFTNESLQRQACEILRDWLRYTP-----AYAHLVTPAEEGAGGAGLGPSKRILGSLL-SDSLFLEVK 201 (368)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-----TTGGGCC---------------CTTHHHH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-----CcHHHHHHHHHHhhhhcccHHHHHHHHHh-hcccHHHHH
Confidence 455678899999999999999999999999998632 22211 11222566666 899999999
Q ss_pred HHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcc
Q 016124 163 ELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK 242 (394)
Q Consensus 163 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 242 (394)
..++++++..... . ...++..+|.++...|++++|+.++++++.+ .|....++..+|.++...|
T Consensus 202 ~~~~~a~~~~p~~-------~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~g 265 (368)
T 1fch_A 202 ELFLAAVRLDPTS-------I-DPDVQCGLGVLFNLSGEYDKAVDCFTAALSV--------RPNDYLLWNKLGATLANGN 265 (368)
T ss_dssp HHHHHHHHHSTTS-------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCcCc-------c-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHcC
Confidence 9999999864321 0 1346688999999999999999999999886 3555678999999999999
Q ss_pred cHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCC---CChhHHHHHHHHH
Q 016124 243 NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGK---DSLPVGEALDCLV 319 (394)
Q Consensus 243 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---~~~~~~~~~~~l~ 319 (394)
++++|+..+++++.+ .|....++..+|.++...|++++|+.++++++.+.....++ .++....++..+|
T Consensus 266 ~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~ 337 (368)
T 1fch_A 266 QSEEAVAAYRRALEL--------QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLR 337 (368)
T ss_dssp CHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHH
Confidence 999999999999985 45667889999999999999999999999999987433111 1233467899999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHHHhhcCC
Q 016124 320 SIQTRLGEDDTKLLELLKRVLRIQEREFGS 349 (394)
Q Consensus 320 ~~~~~~g~~~~~A~~~~~~al~~~~~~~~~ 349 (394)
.++...|+++ +|...++++++.+.+.++.
T Consensus 338 ~~~~~~g~~~-~A~~~~~~~l~~~~~~~~~ 366 (368)
T 1fch_A 338 LALSMLGQSD-AYGAADARDLSTLLTMFGL 366 (368)
T ss_dssp HHHHHHTCGG-GHHHHHTTCHHHHHHHTTC
T ss_pred HHHHHhCChH-hHHHhHHHHHHHHHHhcCC
Confidence 9999999999 9999999999988776653
No 27
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.97 E-value=6.3e-28 Score=210.94 Aligned_cols=292 Identities=13% Similarity=0.104 Sum_probs=232.4
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|....++..+|.++...|++++|+..|+++++.. |....++..+|.++...|++++|+..|++++..
T Consensus 56 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~---- 123 (450)
T 2y4t_A 56 DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLK--------MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS---- 123 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS----
T ss_pred CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----
Confidence 44557788999999999999999999999999862 334677899999999999999999999999864
Q ss_pred cCCCCcchH---hh------------hHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC
Q 016124 92 RGTESADLV---LP------------LFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 156 (394)
Q Consensus 92 ~~~~~~~~~---~~------------~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 156 (394)
.|... .+ +..+|.++...|++++|+..+++++.. .|....++..+|.+|...|
T Consensus 124 ----~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g 191 (450)
T 2y4t_A 124 ----NPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEV--------CVWDAELRELRAECFIKEG 191 (450)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT
T ss_pred ----CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHCC
Confidence 22222 33 344578899999999999999999876 3444567899999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHH-----
Q 016124 157 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHL----- 231 (394)
Q Consensus 157 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~----- 231 (394)
++++|+..++++++.... . ..++..+|.++...|++++|+..+++++.. .++++.....+
T Consensus 192 ~~~~A~~~~~~~~~~~~~-------~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~~~~ 256 (450)
T 2y4t_A 192 EPRKAISDLKAASKLKND-------N---TEAFYKISTLYYQLGDHELSLSEVRECLKL-----DQDHKRCFAHYKQVKK 256 (450)
T ss_dssp CGGGGHHHHHHHHHHHCS-------C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCC-------C---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCChHHHHHHHHHHHH
Confidence 999999999999987432 2 356688999999999999999999999865 12222222222
Q ss_pred ----HHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCc-chHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCC
Q 016124 232 ----LNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS-ISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGK 306 (394)
Q Consensus 232 ----~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 306 (394)
..+|.++...|++++|+.+|++++.+. +.++. ....+..+|.++...|++++|+..+++++.+.
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~------ 325 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTE-----PSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME------ 325 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----CSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC------
Confidence 334999999999999999999998842 22222 24578899999999999999999999998753
Q ss_pred CChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Q 016124 307 DSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSY 364 (394)
Q Consensus 307 ~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 364 (394)
|....++..+|.++...|+++ +|+..+++++++ .+++ ..++..++.+
T Consensus 326 --p~~~~~~~~l~~~~~~~~~~~-~A~~~~~~al~~-----~p~~---~~~~~~l~~~ 372 (450)
T 2y4t_A 326 --PDNVNALKDRAEAYLIEEMYD-EAIQDYETAQEH-----NEND---QQIREGLEKA 372 (450)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTT-----SSSC---HHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHh-----Ccch---HHHHHHHHHH
Confidence 444568999999999999999 999999999874 2334 4455566633
No 28
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.96 E-value=1.4e-26 Score=197.38 Aligned_cols=270 Identities=13% Similarity=0.065 Sum_probs=225.4
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
...++..|..+...|++++|+.++++++.+..... +.+..+.++..+|.+|...|++++|+.++++++++.+... ..
T Consensus 101 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-~~ 177 (378)
T 3q15_A 101 YYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVS--DDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-LY 177 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTGGGCC--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-TC
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhhCC--ChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCC-Cc
Confidence 34677889999999999999999999998876542 4567888999999999999999999999999999987642 12
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
.+..+.++.++|.+|...|++++|+.++++++++.++. ++++....++.++|.+|...|++++|+.++++++.+.+
T Consensus 178 ~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 178 SIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI----QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999998764 45667788899999999999999999999999999887
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEAL 297 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 297 (394)
... +|....++.++|.++...|++++|..++++++.+.... .++.....+..++.++...|+. ..+.+++
T Consensus 254 ~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~l~~ly~~~~~~----~~~~~al 323 (378)
T 3q15_A 254 EKV---PDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR---SHKFYKELFLFLQAVYKETVDE----RKIHDLL 323 (378)
T ss_dssp HHC---GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT---CCSCHHHHHHHHHHHHSSSCCH----HHHHHHH
T ss_pred hhC---ChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHhCCCcH----HHHHHHH
Confidence 653 45668899999999999999999999999999986554 2344455667888888888883 3344444
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhc
Q 016124 298 YIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREF 347 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~ 347 (394)
...++. ...+.....+..+|.++...|+++ +|..+|++++++.+++.
T Consensus 324 ~~~~~~--~~~~~~~~~~~~la~~y~~~g~~~-~A~~~~~~al~~~~~~~ 370 (378)
T 3q15_A 324 SYFEKK--NLHAYIEACARSAAAVFESSCHFE-QAAAFYRKVLKAQEDIL 370 (378)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHH
T ss_pred HHHHhC--CChhHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHh
Confidence 444332 455677788889999999999999 99999999999877653
No 29
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.96 E-value=2.7e-27 Score=200.59 Aligned_cols=297 Identities=13% Similarity=0.094 Sum_probs=235.8
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
.|....++..+|.++...|++++|+..+++++... |....++..+|.++...|++++|+..+++++..
T Consensus 33 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~---- 100 (359)
T 3ieg_A 33 DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALK--------MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKS---- 100 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTS----
T ss_pred CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhc----
Confidence 44556788999999999999999999999999862 333467899999999999999999999999875
Q ss_pred cCCCCc---chHhhhHhH------------HHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC
Q 016124 92 RGTESA---DLVLPLFSL------------GSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 156 (394)
Q Consensus 92 ~~~~~~---~~~~~~~~l------------~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 156 (394)
.| ....++..+ |.++...|++++|+..+++++.. .|....++..+|.++...|
T Consensus 101 ----~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3ieg_A 101 ----NPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEV--------CVWDAELRELRAECFIKEG 168 (359)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTT
T ss_pred ----CCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCchHHHHHHHHHHHHCC
Confidence 33 444444444 79999999999999999999986 2334567899999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHH------
Q 016124 157 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH------ 230 (394)
Q Consensus 157 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~------ 230 (394)
++++|+..+++++... |+. ..++..+|.++...|++++|+..+++++... ++++.....
T Consensus 169 ~~~~A~~~~~~~~~~~-------~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-----~~~~~~~~~~~~~~~ 233 (359)
T 3ieg_A 169 EPRKAISDLKAASKLK-------SDN---TEAFYKISTLYYQLGDHELSLSEVRECLKLD-----QDHKRCFAHYKQVKK 233 (359)
T ss_dssp CHHHHHHHHHHHHTTC-------SCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-------CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----ccchHHHHHHHHHHH
Confidence 9999999999998742 333 2456899999999999999999999998752 233322221
Q ss_pred ---HHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCC
Q 016124 231 ---LLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGK 306 (394)
Q Consensus 231 ---~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 306 (394)
...+|.++...|++++|+..+++++... ++++ .....+..+|.++...|++++|+..++++++..
T Consensus 234 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~------ 302 (359)
T 3ieg_A 234 LNKLIESAEELIRDGRYTDATSKYESVMKTE-----PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME------ 302 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC------
Confidence 2355889999999999999999998852 2222 223457789999999999999999999998852
Q ss_pred CChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhc
Q 016124 307 DSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLG 369 (394)
Q Consensus 307 ~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 369 (394)
|....++..+|.++...|+++ +|+..|++++++ .+++ ..+...++.+....+
T Consensus 303 --~~~~~~~~~~~~~~~~~g~~~-~A~~~~~~a~~~-----~p~~---~~~~~~l~~~~~~~~ 354 (359)
T 3ieg_A 303 --PDNVNALKDRAEAYLIEEMYD-EAIQDYEAAQEH-----NEND---QQIREGLEKAQRLLK 354 (359)
T ss_dssp --TTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTT-----CTTC---HHHHHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhc-----CCCC---hHHHHHHHHHHHHHH
Confidence 444568999999999999999 999999999974 2333 445566666655544
No 30
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.96 E-value=4.6e-28 Score=202.88 Aligned_cols=278 Identities=14% Similarity=0.066 Sum_probs=234.4
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..+..+|..+...|++++|+..+++++.. .|....++..++.++...|++++|+..+++++.. .
T Consensus 23 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~ 86 (330)
T 3hym_B 23 DVVVSLAERHYYNCDFKMCYKLTSVVMEK--------DPFHASCLPVHIGTLVELNKANELFYLSHKLVDL--------Y 86 (330)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHh--------C
Confidence 45678899999999999999999999876 4455667788899999999999999999999986 3
Q ss_pred hHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANG-NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
|....++..+|.++...| ++++|+.++++++... +.. ..++..+|.++...|++++|+..+++++...
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~-------~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~- 155 (330)
T 3hym_B 87 PSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLE-------KTY---GPAWIAYGHSFAVESEHDQAMAAYFTAAQLM- 155 (330)
T ss_dssp TTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTC-------TTC---THHHHHHHHHHHHHTCHHHHHHHHHHHHHHT-
T ss_pred cCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC-------Ccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhc-
Confidence 344567889999999999 9999999999998753 222 2356889999999999999999999998862
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEAL 297 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 297 (394)
|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++
T Consensus 156 -------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~ 220 (330)
T 3hym_B 156 -------KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSI--------APEDPFVMHEVGVVAFQNGEWKTAEKWFLDAL 220 (330)
T ss_dssp -------TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred -------cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 333456778999999999999999999999873 45667889999999999999999999999999
Q ss_pred HHHHHHcCCCC-hhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhh
Q 016124 298 YIREIAFGKDS-LPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFP 376 (394)
Q Consensus 298 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 376 (394)
.......++.. +....++..+|.++...|+++ +|+.++++++++. |....++..+|.++...|++++|..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~ 291 (330)
T 3hym_B 221 EKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYA-EALDYHRQALVLI--------PQNASTYSAIGYIHSLMGNFENAVD 291 (330)
T ss_dssp HHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHS--------TTCSHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHhhhccccccccHHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHhhC--------ccchHHHHHHHHHHHHhccHHHHHH
Confidence 98755432222 444568899999999999999 9999999999862 3345678999999999999999999
Q ss_pred hHHHHHHHHHH
Q 016124 377 LKKRLSNLRMK 387 (394)
Q Consensus 377 ~~~~a~~~~~~ 387 (394)
+|++++++.+.
T Consensus 292 ~~~~al~~~p~ 302 (330)
T 3hym_B 292 YFHTALGLRRD 302 (330)
T ss_dssp HHHTTTTTCSC
T ss_pred HHHHHHccCCC
Confidence 99999877654
No 31
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.8e-27 Score=214.31 Aligned_cols=293 Identities=14% Similarity=0.129 Sum_probs=243.9
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
|....++..+|..+...|++++|+..|++++... |....++..++.++...|++++|...+++++..
T Consensus 302 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~----- 368 (597)
T 2xpi_A 302 EKSSDLLLCKADTLFVRSRFIDVLAITTKILEID--------PYNLDVYPLHLASLHESGEKNKLYLISNDLVDR----- 368 (597)
T ss_dssp GGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCCTTHHHHHHHHHHHTCHHHHHHHHHHHHHH-----
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcC--------cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh-----
Confidence 3456778899999999999999999999998752 223456778899999999999999999998864
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.|....++..+|.+|...|++++|..+|++++++ .|....++..++.+|...|++++|+..|+++++..
T Consensus 369 ---~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 369 ---HPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTM--------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp ---CTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred ---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 4556778899999999999999999999999876 34445678899999999999999999999998753
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
++. ..++..++.++...|++++|+.+|++++.. .|....++..+|.++...|++++|+.+|+
T Consensus 438 -------~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 499 (597)
T 2xpi_A 438 -------QGT---HLPYLFLGMQHMQLGNILLANEYLQSSYAL--------FQYDPLLLNELGVVAFNKSDMQTAINHFQ 499 (597)
T ss_dssp -------TTC---SHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -------ccc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 222 245678999999999999999999999875 34455778999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcc-hHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchH
Q 016124 253 ICLDIMTKTVGPDDQSI-SFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTK 331 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 331 (394)
++++..... +..|.. ..++..+|.++...|++++|+..++++++.. |....++..++.++...|+++ +
T Consensus 500 ~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--------p~~~~~~~~l~~~~~~~g~~~-~ 568 (597)
T 2xpi_A 500 NALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS--------TNDANVHTAIALVYLHKKIPG-L 568 (597)
T ss_dssp HHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------SCCHHHHHHHHHHHHHTTCHH-H
T ss_pred HHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHhCCHH-H
Confidence 999876543 234543 7889999999999999999999999998753 334567999999999999999 9
Q ss_pred HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Q 016124 332 LLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLD 366 (394)
Q Consensus 332 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 366 (394)
|..+|++++++ .|+...++..++.+|.
T Consensus 569 A~~~~~~~l~~--------~p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 569 AITHLHESLAI--------SPNEIMASDLLKRALE 595 (597)
T ss_dssp HHHHHHHHHHH--------CTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHhc--------CCCChHHHHHHHHHHh
Confidence 99999999986 2333556777777653
No 32
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.96 E-value=2.4e-27 Score=193.95 Aligned_cols=270 Identities=21% Similarity=0.175 Sum_probs=227.2
Q ss_pred HHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHH
Q 016124 111 IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRI 190 (394)
Q Consensus 111 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 190 (394)
...|++++|+.++++++++..+..+.++|....++..+|.++...|++++|+.++++++++..+. .+++++....++.
T Consensus 12 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~ 89 (283)
T 3edt_B 12 SGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKT--LGKDHPAVAATLN 89 (283)
T ss_dssp -CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCTTCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH--cCCcchHHHHHHH
Confidence 45789999999999999999999888889999999999999999999999999999999998764 4456677788999
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 016124 191 DLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSIS 270 (394)
Q Consensus 191 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 270 (394)
++|.++...|++++|+.++++++.+.++..++++|....++.++|.++...|++++|+.++++++.+.....++++|...
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 169 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVA 169 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999999999999999999999999998888889999999999999999999999999999999998888888888899
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH-cCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCC
Q 016124 271 FPMLHLGITLYHLNRDKEAEKLVLEALYIREIA-FGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGS 349 (394)
Q Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~ 349 (394)
.++..+|.++...|++++|+.++++++.+.... .+..++.....+..++..+...+... .+. .+..+...... .+.
T Consensus 170 ~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~ 246 (283)
T 3edt_B 170 KTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRR-DSA-PYGEYGSWYKA-CKV 246 (283)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCC-C-------------C-CCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchh-HHH-HHHHHHHHHHh-cCC
Confidence 999999999999999999999999999986543 23334444556667777777666554 443 45555555444 456
Q ss_pred CCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Q 016124 350 ESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 350 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 385 (394)
.+|....++..+|.+|...|++++|..+|++++++.
T Consensus 247 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 282 (283)
T 3edt_B 247 DSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRNR 282 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhh
Confidence 779999999999999999999999999999998753
No 33
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.96 E-value=6.5e-27 Score=191.40 Aligned_cols=271 Identities=20% Similarity=0.188 Sum_probs=226.0
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhH
Q 016124 25 MYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLF 104 (394)
Q Consensus 25 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 104 (394)
.....|++++|+.+|++++++..+..+.++|..+.++..+|.++...|++++|+.++++++.+.+...+++++....++.
T Consensus 10 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 89 (283)
T 3edt_B 10 HSSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLN 89 (283)
T ss_dssp ---CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHH
Confidence 34568999999999999999999988888899999999999999999999999999999999998887778889999999
Q ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 105 SLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 105 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
.+|.++...|++++|+.++++++.+.+...++++|....++.++|.++...|++++|+.++++++++.+.. .+++++.
T Consensus 90 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 167 (283)
T 3edt_B 90 NLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR--LGPDDPN 167 (283)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH--SCTTCHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--cCCCCHH
Confidence 99999999999999999999999999998888889999999999999999999999999999999997765 4556677
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhh-CCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcC
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVG 263 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 263 (394)
...++.++|.++...|++++|+.++++++.+..... +..++.....+..++..+...+....+.. +..+..... ..+
T Consensus 168 ~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 245 (283)
T 3edt_B 168 VAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAP-YGEYGSWYK-ACK 245 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC--------------CCC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHH-HHHHHHHHH-hcC
Confidence 788899999999999999999999999999866543 23345555566677777766665554443 334433332 334
Q ss_pred CCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 264 PDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 264 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
..++....++..+|.++...|++++|..++++++++
T Consensus 246 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 246 VDSPTVNTTLRSLGALYRRQGKLEAAHTLEDCASRN 281 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566788889999999999999999999999999864
No 34
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.5e-27 Score=209.89 Aligned_cols=316 Identities=11% Similarity=0.019 Sum_probs=235.1
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcC-CCCcchHhhhHhH
Q 016124 28 TLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG-TESADLVLPLFSL 106 (394)
Q Consensus 28 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~l 106 (394)
..++.+.++..+++.+..... ..+++..+..++.+|.++...|++++|+++|++|+++.+...+ ..++....++.++
T Consensus 23 ~l~~~~~~l~~~e~~~~~~~~--~~~~~~~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nl 100 (472)
T 4g1t_A 23 NLMEGENSLDDFEDKVFYRTE--FQNREFKATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNY 100 (472)
T ss_dssp CTTTTCCCHHHHHHHHHHHTT--SCC---CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHH--hCCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHH
Confidence 456677777777776654332 2334456778999999999999999999999999999877643 2356778889999
Q ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 107 GSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA--NGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 107 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~--~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
|.+|..+|++++|+.++++++.+.+...++.++..+.++.++|.++.. .+++++|+.+|++++++. |+.+.
T Consensus 101 a~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~-------p~~~~ 173 (472)
T 4g1t_A 101 AWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKK-------PKNPE 173 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS-------TTCHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhC-------CCCHH
Confidence 999999999999999999999999887666666667778888877665 457999999999999863 44444
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH----HcccHHHHHHHHHHHHHHHHh
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS----RSKNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~----~~g~~~~A~~~~~~a~~~~~~ 260 (394)
....+......+...++.++|++.+++++++ +|....++..+|..+. ..|++++|..++++++.+
T Consensus 174 ~~~~~~~~~~~l~~~~~~~~al~~~~~al~l--------~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~--- 242 (472)
T 4g1t_A 174 FTSGLAIASYRLDNWPPSQNAIDPLRQAIRL--------NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEK--- 242 (472)
T ss_dssp HHHHHHHHHHHHHHSCCCCCTHHHHHHHHHH--------CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHhhc--------CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh---
Confidence 3322223333355678889999999999986 3445556666766554 456788999999999874
Q ss_pred hcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCC-------------
Q 016124 261 TVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGE------------- 327 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~------------- 327 (394)
+|....++.++|.+|...|++++|+..++++++.. |....++..+|.+|...+.
T Consensus 243 -----~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~ 309 (472)
T 4g1t_A 243 -----APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYI--------PNNAYLHCQIGCCYRAKVFQVMNLRENGMYGK 309 (472)
T ss_dssp -----CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHHHHHHHHC------CH
T ss_pred -----CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhC--------CChHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 56777889999999999999999999999998854 5556678888888765321
Q ss_pred ------CchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Q 016124 328 ------DDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 328 ------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 385 (394)
++ +|+..+++++++ +|....++..+|.++...|++++|+.+|++++.+.
T Consensus 310 ~~~~~~~~-~A~~~~~~a~~~--------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~ 364 (472)
T 4g1t_A 310 RKLLELIG-HAVAHLKKADEA--------NDNLFRVCSILASLHALADQYEEAEYYFQKEFSKE 364 (472)
T ss_dssp HHHHHHHH-HHHHHHHHHHHH--------CTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSC
T ss_pred HHHHhhHH-HHHHHHHHHhhc--------CCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcC
Confidence 22 455555555443 23445667888999999999999999999988653
No 35
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.96 E-value=3.4e-27 Score=197.30 Aligned_cols=291 Identities=14% Similarity=0.124 Sum_probs=232.3
Q ss_pred CCch-HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Q 016124 10 DDEP-LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 88 (394)
Q Consensus 10 ~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 88 (394)
+++| .....++.+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..+++++..
T Consensus 14 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~- 84 (327)
T 3cv0_A 14 ANNPYMYHENPMEEGLSMLKLANLAEAALAFEAVCQAA--------PEREEAWRSLGLTQAENEKDGLAIIALNHARML- 84 (327)
T ss_dssp SSCGGGGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred hccchhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-
Confidence 3444 455668899999999999999999999998852 334567888999999999999999999999987
Q ss_pred HHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHH----------HHHH-HH-HHHHCC
Q 016124 89 ELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA----------MCSL-AH-AKCANG 156 (394)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~----------~~~l-a~-~~~~~g 156 (394)
.|....++..+|.++...|++++|+..+++++.... ..+..... ...+ +. ++...|
T Consensus 85 -------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (327)
T 3cv0_A 85 -------DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQP-----QYEQLGSVNLQADVDIDDLNVQSEDFFFAAPN 152 (327)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTST-----TTTTC--------------------CCTTSHH
T ss_pred -------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----ccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcc
Confidence 355577899999999999999999999999987632 12111100 1122 44 578889
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Q 016124 157 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAA 236 (394)
Q Consensus 157 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 236 (394)
++++|+.+++++++... +. ..++..+|.++...|++++|+.++++++.. .|....++..+|.
T Consensus 153 ~~~~A~~~~~~~~~~~~-------~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~ 214 (327)
T 3cv0_A 153 EYRECRTLLHAALEMNP-------ND---AQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGA 214 (327)
T ss_dssp HHHHHHHHHHHHHHHST-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCC-------CC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHH
Confidence 99999999999998642 22 356688999999999999999999999875 3455678899999
Q ss_pred HHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCC----ChhHH
Q 016124 237 SYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKD----SLPVG 312 (394)
Q Consensus 237 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~----~~~~~ 312 (394)
++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++.......++. .....
T Consensus 215 ~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 286 (327)
T 3cv0_A 215 TLANGNRPQEALDAYNRALDI--------NPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATR 286 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCH
Confidence 999999999999999999884 355677889999999999999999999999998762211111 11156
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcC
Q 016124 313 EALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFG 348 (394)
Q Consensus 313 ~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~ 348 (394)
.++..++.++...|+++ +|...++++++.....++
T Consensus 287 ~~~~~l~~~~~~~g~~~-~A~~~~~~~l~~~~~~~~ 321 (327)
T 3cv0_A 287 SMWDFFRMLLNVMNRPD-LVELTYAQNVEPFAKEFG 321 (327)
T ss_dssp HHHHHHHHHHHHTTCHH-HHHHHTTCCSHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCHH-HHHHHHHHHHHhcchhhh
Confidence 78899999999999999 999999999988776554
No 36
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.96 E-value=9.7e-27 Score=194.57 Aligned_cols=288 Identities=16% Similarity=0.053 Sum_probs=230.8
Q ss_pred HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC
Q 016124 57 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE 136 (394)
Q Consensus 57 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 136 (394)
....+..+|..+...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 20 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~------- 84 (327)
T 3cv0_A 20 YHENPMEEGLSMLKLANLAEAALAFEAVCQA--------APEREEAWRSLGLTQAENEKDGLAIIALNHARML------- 84 (327)
T ss_dssp GSSCHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred hhHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------
Confidence 4456788999999999999999999999886 4556788899999999999999999999999986
Q ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHH------HHHHHHH-HH-HHHHcCChHHHHHH
Q 016124 137 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIM------ENMRIDL-AE-LLHIVGRGQEGREL 208 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~------~~~~~~l-a~-~~~~~g~~~~A~~~ 208 (394)
.|....++..+|.++...|++++|+..+++++...... ....... ......+ +. ++...|++++|+.+
T Consensus 85 -~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 160 (327)
T 3cv0_A 85 -DPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQY---EQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTL 160 (327)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT---TTC--------------------CCTTSHHHHHHHHHH
T ss_pred -CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcc---HHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHH
Confidence 23445678899999999999999999999999864321 0000000 0000122 44 58888999999999
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHH
Q 016124 209 LEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKE 288 (394)
Q Consensus 209 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 288 (394)
+++++.. .|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++
T Consensus 161 ~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~ 224 (327)
T 3cv0_A 161 LHAALEM--------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVEL--------RPDDAQLWNKLGATLANGNRPQE 224 (327)
T ss_dssp HHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHhh--------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHH
Confidence 9999875 3445678899999999999999999999999884 35567788999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCH----HHHHHHHHHHHH
Q 016124 289 AEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESE----EVMLTLKKVVSY 364 (394)
Q Consensus 289 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~----~~~~~~~~la~~ 364 (394)
|+..+++++... |....++..+|.++...|+++ +|+..+++++.+.....+.... ....++..++.+
T Consensus 225 A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~g~~~-~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 295 (327)
T 3cv0_A 225 ALDAYNRALDIN--------PGYVRVMYNMAVSYSNMSQYD-LAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRML 295 (327)
T ss_dssp HHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--------CCCHHHHHHHHHHHHHhccHH-HHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHH
Confidence 999999998753 334557889999999999999 9999999999876442221111 167889999999
Q ss_pred HHHhcCchhhhhhHHHHHHHHHHH
Q 016124 365 LDKLGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 365 ~~~~g~~~~A~~~~~~a~~~~~~~ 388 (394)
+...|++++|...+++++...++.
T Consensus 296 ~~~~g~~~~A~~~~~~~l~~~~~~ 319 (327)
T 3cv0_A 296 LNVMNRPDLVELTYAQNVEPFAKE 319 (327)
T ss_dssp HHHTTCHHHHHHHTTCCSHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHhcchh
Confidence 999999999999999999887764
No 37
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.96 E-value=6.7e-25 Score=186.84 Aligned_cols=312 Identities=10% Similarity=-0.019 Sum_probs=247.0
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcC
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRG 93 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 93 (394)
..+.++..+|.++...|++++|+.++++++...+ ..+......++..+|.++...|++++|...+++++.+.....
T Consensus 12 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~- 87 (373)
T 1hz4_A 12 MHAEFNALRAQVAINDGNPDEAERLAKLALEELP---PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD- 87 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC---CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC-
Confidence 3467778899999999999999999999988642 122234566888999999999999999999999999887642
Q ss_pred CCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 94 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
+......++..+|.++...|++++|+.++++++.+.+...++.++....++.++|.++...|++++|..++++++.+..
T Consensus 88 -~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 166 (373)
T 1hz4_A 88 -VWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLS 166 (373)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred -cHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhh
Confidence 2334466788999999999999999999999999988765444577788899999999999999999999999999876
Q ss_pred hcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHH--HHHHHHHHHcccHHHHHHHH
Q 016124 174 DSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHL--LNLAASYSRSKNFVEAERLL 251 (394)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~--~~la~~~~~~g~~~~A~~~~ 251 (394)
.. ++ +....++.++|.++...|++++|..++++++.+.... ..+...... ..++.++...|++++|..++
T Consensus 167 ~~---~~--~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~ 238 (373)
T 1hz4_A 167 SY---QP--QQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG---KYHSDWISNANKVRVIYWQMTGDKAAAANWL 238 (373)
T ss_dssp TS---CG--GGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cc---Cc--HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc---CcchhHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 53 12 1234677899999999999999999999998875332 122111222 24556688999999999999
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchH
Q 016124 252 RICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTK 331 (394)
Q Consensus 252 ~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 331 (394)
++++... ..........+..++.++...|++++|...+++++...... +..+....++..++.++...|+++ +
T Consensus 239 ~~a~~~~----~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~-~ 311 (373)
T 1hz4_A 239 RHTAKPE----FANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSL--RLMSDLNRNLLLLNQLYWQAGRKS-D 311 (373)
T ss_dssp HHSCCCC----CTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHH-H
T ss_pred HhCCCCC----CCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--cchhhHHHHHHHHHHHHHHhCCHH-H
Confidence 8876521 11111223356789999999999999999999999987663 223445568889999999999999 9
Q ss_pred HHHHHHHHHHHHHh
Q 016124 332 LLELLKRVLRIQER 345 (394)
Q Consensus 332 A~~~~~~al~~~~~ 345 (394)
|...+++++.+...
T Consensus 312 A~~~l~~al~~~~~ 325 (373)
T 1hz4_A 312 AQRVLLDALKLANR 325 (373)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999998764
No 38
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.95 E-value=2.7e-24 Score=183.11 Aligned_cols=313 Identities=12% Similarity=0.005 Sum_probs=244.5
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
....+...+|.++...|++++|+..+++++.... ..+......++..+|.++...|++++|...+++++.+.+..
T Consensus 12 ~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~---~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-- 86 (373)
T 1hz4_A 12 MHAEFNALRAQVAINDGNPDEAERLAKLALEELP---PGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH-- 86 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCC---TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCC---CCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--
Confidence 3456777889999999999999999999988631 11112345578899999999999999999999999988764
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.+......++.++|.++...|++++|+.++++++.+.+.. ..+.++....++.++|.++...|++++|..++++++.+
T Consensus 87 ~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 164 (373)
T 1hz4_A 87 DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQ--HLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEV 164 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--ccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 2334556778999999999999999999999999998764 22223555677789999999999999999999999987
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHH--HHHHHHHHhhcChHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPM--LHLGITLYHLNRDKEAEKLV 293 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~--~~la~~~~~~g~~~~A~~~~ 293 (394)
..... ++....++..+|.++...|++++|..++++++.+.... ..+...... ...+.++...|++++|..++
T Consensus 165 ~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~ 238 (373)
T 1hz4_A 165 LSSYQ---PQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG---KYHSDWISNANKVRVIYWQMTGDKAAAANWL 238 (373)
T ss_dssp TTTSC---GGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhccC---cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc---CcchhHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 64321 23356788899999999999999999999999875432 112111111 24556688999999999999
Q ss_pred HHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchh
Q 016124 294 LEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEE 373 (394)
Q Consensus 294 ~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 373 (394)
++++... ....+.....+..++.++...|+++ +|...+++++...... ...+....++..+|.++...|++++
T Consensus 239 ~~a~~~~----~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~l~~a~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~ 311 (373)
T 1hz4_A 239 RHTAKPE----FANNHFLQGQWRNIARAQILLGEFE-PAEIVLEELNENARSL--RLMSDLNRNLLLLNQLYWQAGRKSD 311 (373)
T ss_dssp HHSCCCC----CTTCGGGHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HhCCCCC----CCcchhhHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHhC--cchhhHHHHHHHHHHHHHHhCCHHH
Confidence 9887522 1111222345678999999999999 9999999999987763 2234555688899999999999999
Q ss_pred hhhhHHHHHHHHHHH
Q 016124 374 KFPLKKRLSNLRMKY 388 (394)
Q Consensus 374 A~~~~~~a~~~~~~~ 388 (394)
|...+++++.+.+..
T Consensus 312 A~~~l~~al~~~~~~ 326 (373)
T 1hz4_A 312 AQRVLLDALKLANRT 326 (373)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999987754
No 39
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.9e-24 Score=173.14 Aligned_cols=254 Identities=12% Similarity=0.024 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
..+..+..+|.++...|++++|+.++++++... ....++..+|.++...|++++|+.++++++.+.+.. .
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~---------~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~ 72 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH---------KDITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-R 72 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---------CCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh---------ccHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-c
Confidence 456788999999999999999999999999872 345788999999999999999999999999987653 2
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
++.+....++..+|.++...|++++|+.++++++.+. +. +.++...|++++|+..+++++.
T Consensus 73 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-------~~-----------~~~~~~~~~~~~a~~~~~~~~~- 133 (258)
T 3uq3_A 73 ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH-------RT-----------ADILTKLRNAEKELKKAEAEAY- 133 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------CC-----------HHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-------ch-----------hHHHHHHhHHHHHHHHHHHHHH-
Confidence 3444557899999999999999999999999999863 22 3457778889999999999877
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLE 295 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (394)
..|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++
T Consensus 134 -------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 134 -------VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp -------CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -------cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35777889999999999999999999999999984 345668899999999999999999999999
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Q 016124 296 ALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSY 364 (394)
Q Consensus 296 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 364 (394)
+++.. |....++..+|.++...|+++ +|+.++++++++..+.. ..|....++..++.+
T Consensus 199 al~~~--------~~~~~~~~~l~~~~~~~g~~~-~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 199 AIEKD--------PNFVRAYIRKATAQIAVKEYA-SALETLDAARTKDAEVN--NGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHC--------TTCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHT
T ss_pred HHHhC--------HHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHhChhhc--CCCchHHHHHHHHHh
Confidence 98853 344567899999999999999 99999999999876542 234445555555543
No 40
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.6e-24 Score=172.65 Aligned_cols=254 Identities=11% Similarity=0.029 Sum_probs=210.3
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
+..+..+..+|.++...|++++|+.+|+++++.. + ...++..+|.++...|++++|+..+++++.+.....
T Consensus 2 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~---~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~ 72 (258)
T 3uq3_A 2 GSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH------K---DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMR 72 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------C---CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------c---cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccc
Confidence 4567889999999999999999999999999873 1 245788999999999999999999999999865531
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
++.+....++..+|.++...|++++|+.++++++.+. +. +.++...|++++|+..+++++..
T Consensus 73 -~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~-----------~~~~~~~~~~~~a~~~~~~~~~~- 134 (258)
T 3uq3_A 73 -ADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH-----RT-----------ADILTKLRNAEKELKKAEAEAYV- 134 (258)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CC-----------HHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -cchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC-----ch-----------hHHHHHHhHHHHHHHHHHHHHHc-
Confidence 2233347899999999999999999999999999862 11 35677788899999999998873
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
.+....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..++
T Consensus 135 ---------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 197 (258)
T 3uq3_A 135 ---------NPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCN 197 (258)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---------CcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 2334567789999999999999999999999885 34456789999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVS 320 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 320 (394)
+++.. .|....++..+|.++...|++++|...+++++++..+.. ..|....++..++.
T Consensus 198 ~al~~--------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 198 KAIEK--------DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYK 255 (258)
T ss_dssp HHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHH
T ss_pred HHHHh--------CHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHH
Confidence 99884 355678899999999999999999999999999876542 33444445555544
No 41
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.94 E-value=4.4e-25 Score=185.70 Aligned_cols=256 Identities=9% Similarity=-0.046 Sum_probs=214.7
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhc-hhHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR-AKKAVEIYHRVITILE 89 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~al~~~~ 89 (394)
.+|....++..+|.++...|++++|+..|++++.+ .|....+++.+|.++...|+ +++|+..|++++.+
T Consensus 92 ~~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l-- 161 (382)
T 2h6f_A 92 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE-- 161 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH--
T ss_pred CChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH--
Confidence 46888999999999999999999999999999987 35567789999999999997 99999999999997
Q ss_pred HhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 016124 90 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 169 (394)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 169 (394)
+|....+++++|.++...|++++|+..|++++.+ +|....++.++|.++...|++++|+.++++++
T Consensus 162 ------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~l--------dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al 227 (382)
T 2h6f_A 162 ------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQ--------DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLL 227 (382)
T ss_dssp ------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcCChHHHHHHHHHHH
Confidence 5677889999999999999999999999999987 46666789999999999999999999999999
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHH-----HHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcc-
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEG-----RELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK- 242 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g- 242 (394)
++.. +. ..++.++|.++.. .|..++| +.++++++.+ .|....++.+++.++...|
T Consensus 228 ~l~P-------~~---~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l--------~P~~~~a~~~l~~ll~~~g~ 289 (382)
T 2h6f_A 228 KEDV-------RN---NSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL--------VPHNESAWNYLKGILQDRGL 289 (382)
T ss_dssp HHCT-------TC---HHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTTTCG
T ss_pred HhCC-------CC---HHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHccCc
Confidence 9743 22 4567899999999 5665888 5889999885 4666789999999999988
Q ss_pred -cHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc--------C-hHHHHHHHHHH-HHHHHHHcCCCChhH
Q 016124 243 -NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN--------R-DKEAEKLVLEA-LYIREIAFGKDSLPV 311 (394)
Q Consensus 243 -~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~-~~~A~~~~~~a-~~~~~~~~~~~~~~~ 311 (394)
++++|++.++++ + ..|....++..+|.+|...| + +++|+.+|+++ ++ -.|..
T Consensus 290 ~~~~~a~~~~~~~-~--------~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~~A~~~~~~l~~~--------~DP~r 352 (382)
T 2h6f_A 290 SKYPNLLNQLLDL-Q--------PSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKE--------KDTIR 352 (382)
T ss_dssp GGCHHHHHHHHHH-T--------TTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHT--------TCGGG
T ss_pred cchHHHHHHHHHh-c--------cCCCCHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHH--------hCchh
Confidence 689998877654 2 35677888999999999985 2 47788888776 44 33666
Q ss_pred HHHHHHHHHHHHHh
Q 016124 312 GEALDCLVSIQTRL 325 (394)
Q Consensus 312 ~~~~~~l~~~~~~~ 325 (394)
...|..++..+...
T Consensus 353 ~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 353 KEYWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 66777777766544
No 42
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.94 E-value=1.7e-25 Score=181.91 Aligned_cols=250 Identities=9% Similarity=0.004 Sum_probs=207.5
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCC
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSL 180 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 180 (394)
..+...|.++...|++++|+..++++++. .|....++..+|.++...|++++|+..++++++. ++
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-------~~ 68 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAK--------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-------VN 68 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHT--------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-------SC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-------cC
Confidence 46778999999999999999999999875 2333347889999999999999999999999872 12
Q ss_pred chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh
Q 016124 181 DDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 181 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 260 (394)
++.....++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++.+
T Consensus 69 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--- 137 (272)
T 3u4t_A 69 ATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDR--------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--- 137 (272)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS---
T ss_pred chhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhc--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc---
Confidence 33334566789999999999999999999999985 3445578999999999999999999999998763
Q ss_pred hcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCC---CchHHHHHHH
Q 016124 261 TVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGE---DDTKLLELLK 337 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---~~~~A~~~~~ 337 (394)
.|....++..+|......+++++|+..++++++.. |....++..+|.++...|+ ++ +|+..++
T Consensus 138 -----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~--------p~~~~~~~~~~~~~~~~~~~~~~~-~A~~~~~ 203 (272)
T 3u4t_A 138 -----TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELK--------PNIYIGYLWRARANAAQDPDTKQG-LAKPYYE 203 (272)
T ss_dssp -----SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHHSTTCSSC-TTHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------ccchHHHHHHHHHHHHcCcchhhH-HHHHHHH
Confidence 56778899999944455569999999999998864 3345678899999999998 88 8999999
Q ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHH
Q 016124 338 RVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQ 390 (394)
Q Consensus 338 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 390 (394)
+++++......+..+....++..+|.+|...|++++|..+|++++++.++...
T Consensus 204 ~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 256 (272)
T 3u4t_A 204 KLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILALDPTNKK 256 (272)
T ss_dssp HHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHH
Confidence 99998765433223445688999999999999999999999999998876543
No 43
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.94 E-value=4.3e-25 Score=179.54 Aligned_cols=244 Identities=12% Similarity=0.032 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..+...|.++...|++++|+..++++++. .|....++..+|.++...|++++|+..+++++.. +++.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~ 70 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEAK--------KYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-----VNAT 70 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHHT--------TCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SCTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----cCch
Confidence 35678899999999999999999999875 4455668999999999999999999999999873 2223
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
.....++..+|.++...|++++|+.+++++++.... . ..++..+|.++...|++++|+.++++++..
T Consensus 71 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-------~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--- 137 (272)
T 3u4t_A 71 KAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTT-------R---LDMYGQIGSYFYNKGNFPLAIQYMEKQIRP--- 137 (272)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-------C---THHHHHHHHHHHHTTCHHHHHHHHGGGCCS---
T ss_pred hHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcc-------c---HHHHHHHHHHHHHccCHHHHHHHHHHHhhc---
Confidence 334677899999999999999999999999996432 2 246689999999999999999999998864
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcC---hHHHHHHHHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNR---DKEAEKLVLE 295 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~---~~~A~~~~~~ 295 (394)
.|....++.++|......+++++|+..+++++++ .|....++..+|.++...|+ +++|+..+++
T Consensus 138 -----~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 204 (272)
T 3u4t_A 138 -----TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLEL--------KPNIYIGYLWRARANAAQDPDTKQGLAKPYYEK 204 (272)
T ss_dssp -----SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHSTTCSSCTTHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCcchhhHHHHHHHHH
Confidence 5666788999994444556999999999999985 35557888999999999999 9999999999
Q ss_pred HHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 016124 296 ALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRI 342 (394)
Q Consensus 296 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~ 342 (394)
++++.....+++......++..+|.++...|+++ +|+.++++++++
T Consensus 205 a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~A~~~~~~al~~ 250 (272)
T 3u4t_A 205 LIEVCAPGGAKYKDELIEANEYIAYYYTINRDKV-KADAAWKNILAL 250 (272)
T ss_dssp HHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHH
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhc
Confidence 9998755422222335578899999999999999 999999999986
No 44
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.94 E-value=1.2e-24 Score=183.06 Aligned_cols=255 Identities=11% Similarity=-0.061 Sum_probs=212.6
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK-AVDAESVFSRILKIYTK 132 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~-~~~A~~~~~~al~~~~~ 132 (394)
.|....++..+|.++...|++++|+..+++++.+ +|....+++.+|.++...|+ +++|+..|++++.+
T Consensus 93 ~p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l--------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l--- 161 (382)
T 2h6f_A 93 SDKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL--------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEE--- 161 (382)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH---
T ss_pred ChhhHHHHHHHHHHHHHCCChHHHHHHHHHHHHh--------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHH---
Confidence 4678889999999999999999999999999987 67778899999999999997 99999999999987
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
+|....++.++|.++...|++++|+..|++++++..+ . ..++.++|.++...|++++|+.+++++
T Consensus 162 -----~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~-------~---~~a~~~lg~~~~~~g~~~eAl~~~~~a 226 (382)
T 2h6f_A 162 -----QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAK-------N---YHAWQHRQWVIQEFKLWDNELQYVDQL 226 (382)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-------C---HHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc-------C---HHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 4566778999999999999999999999999997432 2 456799999999999999999999999
Q ss_pred HHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHH-----HHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc--
Q 016124 213 LLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEA-----ERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN-- 284 (394)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A-----~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-- 284 (394)
+.+ +|....+++++|.++.. .|.+++| +.++++++.+ .|....++.+++.++...|
T Consensus 227 l~l--------~P~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l--------~P~~~~a~~~l~~ll~~~g~~ 290 (382)
T 2h6f_A 227 LKE--------DVRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL--------VPHNESAWNYLKGILQDRGLS 290 (382)
T ss_dssp HHH--------CTTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTTTCGG
T ss_pred HHh--------CCCCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHccCcc
Confidence 986 56778899999999999 5665788 5889999884 4677789999999999988
Q ss_pred ChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCC---------CchHHHHHHHHH-HHHHHhhcCCCCHHH
Q 016124 285 RDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGE---------DDTKLLELLKRV-LRIQEREFGSESEEV 354 (394)
Q Consensus 285 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---------~~~~A~~~~~~a-l~~~~~~~~~~~~~~ 354 (394)
++++|++.++++ + ..|....++..+|.++...|+ .+ +|+.+|+++ ++ .+|..
T Consensus 291 ~~~~a~~~~~~~-~--------~~p~~~~al~~La~~~~~~~~~~~~~~~~~~~-~A~~~~~~l~~~--------~DP~r 352 (382)
T 2h6f_A 291 KYPNLLNQLLDL-Q--------PSHSSPYLIAFLVDIYEDMLENQCDNKEDILN-KALELCEILAKE--------KDTIR 352 (382)
T ss_dssp GCHHHHHHHHHH-T--------TTCCCHHHHHHHHHHHHHHHHTTCSSHHHHHH-HHHHHHHHHHHT--------TCGGG
T ss_pred chHHHHHHHHHh-c--------cCCCCHHHHHHHHHHHHHHhcccccchHHHHH-HHHHHHHHHHHH--------hCchh
Confidence 688998877664 2 234455678899999998862 24 666666665 43 35666
Q ss_pred HHHHHHHHHHHHHh
Q 016124 355 MLTLKKVVSYLDKL 368 (394)
Q Consensus 355 ~~~~~~la~~~~~~ 368 (394)
...|..++..+..+
T Consensus 353 ~~~w~~~~~~l~~~ 366 (382)
T 2h6f_A 353 KEYWRYIGRSLQSK 366 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888877654
No 45
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=6e-25 Score=171.68 Aligned_cols=200 Identities=18% Similarity=0.174 Sum_probs=162.2
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
|..+.++..+|.++...|++++|+..|++++.. .|....++..+|.++...|++++|+..+++++++
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~----- 68 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKLGLVNPALENGKTLVAR----- 68 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Confidence 344567889999999999999999999999875 3455678999999999999999999999999987
Q ss_pred CCCCcchHhhhHhHHHHHHHh-----------CcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKE-----------GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEA 161 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~-----------g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 161 (394)
.|....++..+|.++... |++++|+..+++++++ .|....++.++|.++...|++++|
T Consensus 69 ---~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 69 ---TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV--------NPRYAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCChHHH
Confidence 566778999999999999 9999999999999987 455567889999999999999999
Q ss_pred HHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHc
Q 016124 162 VELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS 241 (394)
Q Consensus 162 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 241 (394)
+..|++++++. . . ..++.++|.++...|++++|+..|++++.. +|....++.++|.++...
T Consensus 138 ~~~~~~al~~~-~-------~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~P~~~~~~~~la~~~~~~ 198 (217)
T 2pl2_A 138 EASLKQALALE-D-------T---PEIRSALAELYLSMGRLDEALAQYAKALEQ--------APKDLDLRVRYASALLLK 198 (217)
T ss_dssp HHHHHHHHHHC-C-------C---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHhcc-c-------c---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHc
Confidence 99999999974 2 1 345689999999999999999999999986 466678899999999999
Q ss_pred ccHHHHHHHHHHHH
Q 016124 242 KNFVEAERLLRICL 255 (394)
Q Consensus 242 g~~~~A~~~~~~a~ 255 (394)
|++++|+..++++-
T Consensus 199 g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 199 GKAEEAARAAALEH 212 (217)
T ss_dssp --------------
T ss_pred cCHHHHHHHHHHHh
Confidence 99999999998764
No 46
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.93 E-value=1.1e-22 Score=179.33 Aligned_cols=296 Identities=11% Similarity=0.050 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHh----hhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH----hhchhHHHHHHHHHHHH
Q 016124 16 DAILLHMGSMYST----LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVITI 87 (394)
Q Consensus 16 ~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~ 87 (394)
+.+++.+|.+|.. .+++++|+.+|+++.+. . ...++..+|.+|.. .+++++|+.+|+++.+.
T Consensus 75 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 144 (490)
T 2xm6_A 75 TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK-------G---LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ 144 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 4567778888887 78888888888887652 1 23456667777777 67777777777776543
Q ss_pred HHHhcCCCCcchHhhhHhHHHHHHH----hCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----CCCHH
Q 016124 88 LELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAE 159 (394)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~ 159 (394)
....++..+|.+|.. .+++++|+.+|+++.+. ++ ..++..+|.+|.. .++++
T Consensus 145 ----------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~ 204 (490)
T 2xm6_A 145 ----------GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ-------GN---VWSCNQLGYMYSRGLGVERNDA 204 (490)
T ss_dssp ----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHH
T ss_pred ----------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHhcCCCCCcCHH
Confidence 124456666666666 56666666666666542 11 2344555555555 55555
Q ss_pred HHHHHHHHHHHHHHhc------------ccCC---------------CchHHHHHHHHHHHHHHHH----cCChHHHHHH
Q 016124 160 EAVELYKKALRVIKDS------------NYMS---------------LDDSIMENMRIDLAELLHI----VGRGQEGREL 208 (394)
Q Consensus 160 ~A~~~~~~a~~~~~~~------------~~~~---------------~~~~~~~~~~~~la~~~~~----~g~~~~A~~~ 208 (394)
+|+.+|+++.+.-... .... ..+ ..++.++|.+|.. .+++++|+.+
T Consensus 205 ~A~~~~~~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~---~~a~~~lg~~y~~g~~~~~d~~~A~~~ 281 (490)
T 2xm6_A 205 ISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGN---SIAQFRLGYILEQGLAGAKEPLKALEW 281 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTC---HHHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHCCCCCCCCHHHHHHH
Confidence 5555555554310000 0000 000 1233556666665 5666666666
Q ss_pred HHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHc-----ccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhh
Q 016124 209 LEECLLITEKYKGKEHPSFVTHLLNLAASYSRS-----KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL 283 (394)
Q Consensus 209 ~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 283 (394)
|+++.+. ....++..+|.+|... +++++|+.+|+++.+. ....++.++|.+|...
T Consensus 282 ~~~a~~~----------~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~----------~~~~a~~~lg~~y~~~ 341 (490)
T 2xm6_A 282 YRKSAEQ----------GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQ----------GDATAQANLGAIYFRL 341 (490)
T ss_dssp HHHHHTT----------TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHS
T ss_pred HHHHHHc----------CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhc----------CCHHHHHHHHHHHHhC
Confidence 6665431 1234566777777776 7777777777777661 1235677888888775
Q ss_pred c---ChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH----hCCCchHHHHHHHHHHHHHHhhcCCCCHHHHH
Q 016124 284 N---RDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR----LGEDDTKLLELLKRVLRIQEREFGSESEEVML 356 (394)
Q Consensus 284 g---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 356 (394)
| ++++|+.+|+++++. ++ ..++..||.++.. .++++ +|+.+|+++.+. .+ ..
T Consensus 342 g~~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~-~A~~~~~~A~~~-------~~---~~ 400 (490)
T 2xm6_A 342 GSEEEHKKAVEWFRKAAAK-------GE---KAAQFNLGNALLQGKGVKKDEQ-QAAIWMRKAAEQ-------GL---SA 400 (490)
T ss_dssp CCHHHHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHH-HHHHHHHHHHHT-------TC---HH
T ss_pred CCcccHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHH-HHHHHHHHHHhC-------CC---HH
Confidence 5 778888888887752 22 4578899999998 78888 999999998862 22 46
Q ss_pred HHHHHHHHHHH----hcCchhhhhhHHHHHHHH
Q 016124 357 TLKKVVSYLDK----LGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 357 ~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 385 (394)
++.+||.+|.. .+++++|..+|+++++..
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~ 433 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTND 433 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 78899999998 899999999999999987
No 47
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.93 E-value=2.4e-24 Score=168.22 Aligned_cols=197 Identities=18% Similarity=0.119 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
..++..+|.++...|++++|+..|+++++. .|....++..+|.++...|++++|+..+++++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 68 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALKE--------NPQDPEALYWLARTQLKLGLVNPALENGKTLVAR-------- 68 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 457889999999999999999999999875 6777889999999999999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHC-----------CCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHH
Q 016124 138 DGRVGMAMCSLAHAKCAN-----------GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGR 206 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~-----------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 206 (394)
.|....++.++|.++... |++++|+..+++++++. |+. ..++.++|.++...|++++|+
T Consensus 69 ~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-------P~~---~~~~~~lg~~~~~~g~~~~A~ 138 (217)
T 2pl2_A 69 TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVN-------PRY---APLHLQRGLVYALLGERDKAE 138 (217)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHC-------TTC---HHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhC-------ccc---HHHHHHHHHHHHHcCChHHHH
Confidence 455567889999999999 99999999999999963 232 345689999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcCh
Q 016124 207 ELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRD 286 (394)
Q Consensus 207 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 286 (394)
..|++++++ + ....++.++|.++...|++++|+..|++++++ .|....++..+|.++...|++
T Consensus 139 ~~~~~al~~-------~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~ 201 (217)
T 2pl2_A 139 ASLKQALAL-------E--DTPEIRSALAELYLSMGRLDEALAQYAKALEQ--------APKDLDLRVRYASALLLKGKA 201 (217)
T ss_dssp HHHHHHHHH-------C--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHTC----
T ss_pred HHHHHHHhc-------c--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHccCH
Confidence 999999987 2 34668899999999999999999999999984 466778899999999999999
Q ss_pred HHHHHHHHHHH
Q 016124 287 KEAEKLVLEAL 297 (394)
Q Consensus 287 ~~A~~~~~~a~ 297 (394)
++|+..++++-
T Consensus 202 ~~A~~~~~~~~ 212 (217)
T 2pl2_A 202 EEAARAAALEH 212 (217)
T ss_dssp -----------
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 48
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.93 E-value=1.7e-22 Score=178.11 Aligned_cols=294 Identities=14% Similarity=0.064 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHHh----hhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH----hhchhHHHHHHHHHHH
Q 016124 15 LDAILLHMGSMYST----LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVIT 86 (394)
Q Consensus 15 ~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~ 86 (394)
.+.+++.+|..|.. .+++++|+.+|+++.+. + ...+++.+|.+|.. .+++++|+.+|+++.+
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 107 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-------G---YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAAL 107 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 46778999999999 99999999999999863 1 24578899999999 9999999999999976
Q ss_pred HHHHhcCCCCcchHhhhHhHHHHHHH----hCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----CCCH
Q 016124 87 ILELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNA 158 (394)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~ 158 (394)
. ....++..+|.+|.. .+++++|+.+|+++.+. ++ ..++..+|.+|.. .+++
T Consensus 108 ~----------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~d~ 167 (490)
T 2xm6_A 108 K----------GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ-------GR---DSGQQSMGDAYFEGDGVTRDY 167 (490)
T ss_dssp T----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCH
T ss_pred C----------CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCH
Confidence 3 235678899999999 89999999999999763 22 4578899999998 8999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Q 016124 159 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNL 234 (394)
Q Consensus 159 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 234 (394)
++|+.+|+++.+. + + ..++..+|.+|.. .+++++|+.+|+++.+. . ...++..+
T Consensus 168 ~~A~~~~~~a~~~-------~-~----~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~-------~---~~~a~~~l 225 (490)
T 2xm6_A 168 VMAREWYSKAAEQ-------G-N----VWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS-------G---DELGQLHL 225 (490)
T ss_dssp HHHHHHHHHHHHT-------T-C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHH
T ss_pred HHHHHHHHHHHHC-------C-C----HHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC-------C---CHHHHHHH
Confidence 9999999999873 1 1 2455778888887 78888888888877642 1 12334444
Q ss_pred HHHHHH----cccHHHHHHHHHHHHHHHH-----------------------------hhcCCCCCcchHHHHHHHHHHH
Q 016124 235 AASYSR----SKNFVEAERLLRICLDIMT-----------------------------KTVGPDDQSISFPMLHLGITLY 281 (394)
Q Consensus 235 a~~~~~----~g~~~~A~~~~~~a~~~~~-----------------------------~~~~~~~~~~~~~~~~la~~~~ 281 (394)
|.+|.. .+++++|+.+|+++.+.-. +.. ......++..+|.+|.
T Consensus 226 g~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~---~~~~~~a~~~Lg~~y~ 302 (490)
T 2xm6_A 226 ADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSA---EQGNSDGQYYLAHLYD 302 (490)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH---TTTCHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH---HcCCHHHHHHHHHHHH
Confidence 444443 4444455444444432100 000 0012334555666665
Q ss_pred hh-----cChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhC---CCchHHHHHHHHHHHHHHhhcCCCCHH
Q 016124 282 HL-----NRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLG---EDDTKLLELLKRVLRIQEREFGSESEE 353 (394)
Q Consensus 282 ~~-----g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g---~~~~~A~~~~~~al~~~~~~~~~~~~~ 353 (394)
.. +++++|+.+|+++.+. ++ ..++..+|.++...| +++ +|+.+|+++.+. .+
T Consensus 303 ~~~~g~~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~y~~~g~~~~~~-~A~~~~~~a~~~-------~~-- 362 (490)
T 2xm6_A 303 KGAEGVAKNREQAISWYTKSAEQ-------GD---ATAQANLGAIYFRLGSEEEHK-KAVEWFRKAAAK-------GE-- 362 (490)
T ss_dssp HCBTTBCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHSCCHHHHH-HHHHHHHHHHHT-------TC--
T ss_pred cCCCCCcCCHHHHHHHHHHHHhc-------CC---HHHHHHHHHHHHhCCCcccHH-HHHHHHHHHHHC-------CC--
Confidence 55 5666666666665541 12 235666777776654 455 677777776652 22
Q ss_pred HHHHHHHHHHHHHH----hcCchhhhhhHHHHHHH
Q 016124 354 VMLTLKKVVSYLDK----LGRKEEKFPLKKRLSNL 384 (394)
Q Consensus 354 ~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~ 384 (394)
..++..||.+|.. .+++++|+.+|+++.+.
T Consensus 363 -~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~ 396 (490)
T 2xm6_A 363 -KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ 396 (490)
T ss_dssp -HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC
Confidence 4567788888888 78888888888888764
No 49
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.92 E-value=4.3e-22 Score=162.33 Aligned_cols=279 Identities=13% Similarity=0.006 Sum_probs=211.9
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHhCCchHH-HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhh
Q 016124 24 SMYSTLENYEKSMLVYQRVINVLESRYGKTSIL-LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLP 102 (394)
Q Consensus 24 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 102 (394)
.-.+..|+|.+|+..+++... .+|. .......++.+|...|++++|+..++. ..+....+
T Consensus 7 ~~~~~~g~y~~ai~~~~~~~~--------~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~-----------~~~~~~~a 67 (291)
T 3mkr_A 7 KNAFYIGSYQQCINEAQRVKP--------SSPERDVERDVFLYRAYLAQRKYGVVLDEIKP-----------SSAPELQA 67 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHSCC--------CSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT-----------TSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccc--------CCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc-----------cCChhHHH
Confidence 345678999999998876533 2233 345667789999999999999976543 13446678
Q ss_pred hHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCch
Q 016124 103 LFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDD 182 (394)
Q Consensus 103 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 182 (394)
+..++..+...|++++|+..+++.+.. ..+|....++..+|.++...|++++|+..+++ ++.
T Consensus 68 ~~~la~~~~~~~~~~~A~~~l~~ll~~------~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~------------~~~ 129 (291)
T 3mkr_A 68 VRMFAEYLASHSRRDAIVAELDREMSR------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ------------GDS 129 (291)
T ss_dssp HHHHHHHHHCSTTHHHHHHHHHHHHHS------CCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT------------CCS
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHhc------ccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC------------CCC
Confidence 888999999999999999999988753 11355556789999999999999999999887 122
Q ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHH--HHHHHHHHcccHHHHHHHHHHHHHHHHh
Q 016124 183 SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLL--NLAASYSRSKNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 183 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~--~la~~~~~~g~~~~A~~~~~~a~~~~~~ 260 (394)
..++..+|.++..+|++++|+..+++++... |....... .+..++...|++++|+..|+++++.
T Consensus 130 ---~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--------p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~--- 195 (291)
T 3mkr_A 130 ---LECMAMTVQILLKLDRLDLARKELKKMQDQD--------EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK--- 195 (291)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH---
T ss_pred ---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--------cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh---
Confidence 2356789999999999999999999998761 22221111 1223444569999999999999984
Q ss_pred hcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 261 TVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
.|....++.++|.++...|++++|+..+++++... |....++.++|.++...|+..+.+..++++++
T Consensus 196 -----~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~--------p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~ 262 (291)
T 3mkr_A 196 -----CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD--------SGHPETLINLVVLSQHLGKPPEVTNRYLSQLK 262 (291)
T ss_dssp -----SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 45677899999999999999999999999999854 44455799999999999999734678999998
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhH
Q 016124 341 RIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLK 378 (394)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 378 (394)
++ .|++|...+ +..+.+.++++..-|
T Consensus 263 ~~-----~P~~~~~~d-------~~~~~~~fd~~~~~~ 288 (291)
T 3mkr_A 263 DA-----HRSHPFIKE-------YRAKENDFDRLVLQY 288 (291)
T ss_dssp HH-----CTTCHHHHH-------HHHHHHHHHHHHHHH
T ss_pred Hh-----CCCChHHHH-------HHHHHHHHHHHHHHc
Confidence 75 466776544 345555666655544
No 50
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.91 E-value=1.6e-21 Score=158.38 Aligned_cols=225 Identities=15% Similarity=0.170 Sum_probs=192.8
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH----hhchhHHHHHHHHHHHHH
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS----IGRAKKAVEIYHRVITIL 88 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~ 88 (394)
|..+.+++.+|..+...|++++|+.+|+++++. ++ ..++..+|.++.. .|++++|+.+|+++++.
T Consensus 3 ~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~- 71 (273)
T 1ouv_A 3 EQDPKELVGLGAKSYKEKDFTQAKKYFEKACDL-------KE---NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL- 71 (273)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-
T ss_pred CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC-
Confidence 455678899999999999999999999999871 22 3578899999999 99999999999999875
Q ss_pred HHhcCCCCcchHhhhHhHHHHHHH----hCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----CCCHHH
Q 016124 89 ELNRGTESADLVLPLFSLGSLFIK----EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEE 160 (394)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~ 160 (394)
+ ...++..+|.++.. .+++++|+.+|+++++. + ...++.++|.+|.. .+++++
T Consensus 72 ------~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~ 132 (273)
T 1ouv_A 72 ------N---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKK 132 (273)
T ss_dssp ------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHH
T ss_pred ------C---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHH
Confidence 1 46788999999999 99999999999999874 2 24578999999999 999999
Q ss_pred HHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Q 016124 161 AVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAA 236 (394)
Q Consensus 161 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 236 (394)
|+.+++++++. + + ..++.++|.++.. .+++++|+.+++++++. . ...++.++|.
T Consensus 133 A~~~~~~a~~~-------~--~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~ 190 (273)
T 1ouv_A 133 AVEYFTKACDL-------N--D---GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------K---DSPGCFNAGN 190 (273)
T ss_dssp HHHHHHHHHHT-------T--C---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHH
T ss_pred HHHHHHHHHhc-------C--c---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHH
Confidence 99999999873 1 1 3456889999999 99999999999999864 1 2467889999
Q ss_pred HHHH----cccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHh----hcChHHHHHHHHHHHHH
Q 016124 237 SYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALYI 299 (394)
Q Consensus 237 ~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~ 299 (394)
+|.. .+++++|+.+++++++. . + ..++..+|.+|.. .+++++|+.+|+++++.
T Consensus 191 ~~~~g~~~~~~~~~A~~~~~~a~~~-------~-~--~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~ 251 (273)
T 1ouv_A 191 MYHHGEGATKNFKEALARYSKACEL-------E-N--GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 251 (273)
T ss_dssp HHHHTCSSCCCHHHHHHHHHHHHHT-------T-C--HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHH
T ss_pred HHHcCCCCCccHHHHHHHHHHHHhC-------C-C--HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHc
Confidence 9999 99999999999999873 1 2 5688999999999 99999999999999885
No 51
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.90 E-value=4.7e-21 Score=155.68 Aligned_cols=229 Identities=14% Similarity=0.048 Sum_probs=195.2
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHH
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAVELYKKALRVI 172 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~ 172 (394)
|..+.++..+|.++...|++++|+.+|+++++. +++ .++..+|.++.. .+++++|+.+|+++++..
T Consensus 3 ~~~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-------~~~---~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 72 (273)
T 1ouv_A 3 EQDPKELVGLGAKSYKEKDFTQAKKYFEKACDL-------KEN---SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 72 (273)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------TCH---HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CCChHHHHHHHHHHHhCCCHHHHHHHHHHHHHC-------CCH---HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC
Confidence 345678899999999999999999999999871 232 578899999999 999999999999998741
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH----cccH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR----SKNF 244 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~ 244 (394)
+ ..++.++|.++.. .+++++|+.+++++++. ....++.++|.+|.. .+++
T Consensus 73 --------~----~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----------~~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 73 --------Y----SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL----------KYAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp --------C----HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHCSSSCCCH
T ss_pred --------C----HHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc----------CCccHHHHHHHHHHcCCCcccCH
Confidence 1 3466889999999 99999999999999864 135678999999999 9999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHh----hcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHH
Q 016124 245 VEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVS 320 (394)
Q Consensus 245 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~ 320 (394)
++|+.+|+++++. . ...++..+|.++.. .+++++|+.+++++++. ++ ..++..+|.
T Consensus 131 ~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~lg~ 190 (273)
T 1ouv_A 131 KKAVEYFTKACDL-------N---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL-------KD---SPGCFNAGN 190 (273)
T ss_dssp HHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHH
T ss_pred HHHHHHHHHHHhc-------C---cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-------CC---HHHHHHHHH
Confidence 9999999999882 1 35678899999998 99999999999999863 22 357889999
Q ss_pred HHHH----hCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH----hcCchhhhhhHHHHHHHHHHH
Q 016124 321 IQTR----LGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDK----LGRKEEKFPLKKRLSNLRMKY 388 (394)
Q Consensus 321 ~~~~----~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~ 388 (394)
++.. .++++ +|+.+|+++++. .+ ..++..+|.+|.. .+++++|+.+|++++++.+..
T Consensus 191 ~~~~g~~~~~~~~-~A~~~~~~a~~~-------~~---~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 191 MYHHGEGATKNFK-EALARYSKACEL-------EN---GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHTCSSCCCHH-HHHHHHHHHHHT-------TC---HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHcCCCCCccHH-HHHHHHHHHHhC-------CC---HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 9999 99999 999999999874 22 5678899999999 999999999999999987654
No 52
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.90 E-value=2.8e-21 Score=159.34 Aligned_cols=248 Identities=10% Similarity=0.058 Sum_probs=196.6
Q ss_pred hhhchHHHHHHHHHHHHHHHH-Hh--CCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhH
Q 016124 28 TLENYEKSMLVYQRVINVLES-RY--GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLF 104 (394)
Q Consensus 28 ~~g~~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 104 (394)
..|++++|..+++++.+..+. .+ +++.......+...|.+|...|++++|+..|.+++.+..... +....+.++.
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~ 80 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNR--SLFHAAKAFE 80 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHH
Confidence 578999999999999887653 12 345556677788889999999999999999999999987753 4456678999
Q ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 105 SLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 105 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
++|.+|...|++++|+.+|++++.+.... .+....+.++.++|.+|.. |++++|+.+|++++++.+.. .+...
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~----~~~~~ 153 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE----ERLRQ 153 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT----TCHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC----CChhH
Confidence 99999999999999999999999998764 2334567889999999999 99999999999999998763 34556
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCC
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP 264 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 264 (394)
...++.++|.++..+|++++|+.+|++++.+..... ..+....++..+|.++...|++++|+.+|++++ +....
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~--- 227 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEME--NYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF--- 227 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS---
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC--ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC---
Confidence 678889999999999999999999999999877643 233455678899999999999999999999998 43211
Q ss_pred CCCcchHHHHHHHHHHHhhcChHHHHH
Q 016124 265 DDQSISFPMLHLGITLYHLNRDKEAEK 291 (394)
Q Consensus 265 ~~~~~~~~~~~la~~~~~~g~~~~A~~ 291 (394)
........+..++..+ ..|+.+.+..
T Consensus 228 ~~~~e~~~l~~l~~~~-~~~d~~~~~~ 253 (307)
T 2ifu_A 228 SGSEDCAALEDLLQAY-DEQDEEQLLR 253 (307)
T ss_dssp TTSHHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred CCCHHHHHHHHHHHHH-HhcCHHHHHH
Confidence 1122233455566655 4666554444
No 53
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.90 E-value=3.4e-22 Score=162.94 Aligned_cols=260 Identities=12% Similarity=0.023 Sum_probs=201.5
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcch-HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHH
Q 016124 66 KVLGSIGRAKKAVEIYHRVITILELNRGTESADL-VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA 144 (394)
Q Consensus 66 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 144 (394)
...+..|+|.+|+..+++... .+|.. ......++.+|...|++++|+..++. ..+....+
T Consensus 7 ~~~~~~g~y~~ai~~~~~~~~--------~~p~~~~e~~~~l~r~yi~~g~~~~al~~~~~-----------~~~~~~~a 67 (291)
T 3mkr_A 7 KNAFYIGSYQQCINEAQRVKP--------SSPERDVERDVFLYRAYLAQRKYGVVLDEIKP-----------SSAPELQA 67 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHSCC--------CSHHHHHHHHHHHHHHHHHTTCHHHHHHHSCT-----------TSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccc--------CCchhhHHHHHHHHHHHHHCCCHHHHHHHhcc-----------cCChhHHH
Confidence 445678999999988876432 23333 45667789999999999999976643 13345678
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCC
Q 016124 145 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEH 224 (394)
Q Consensus 145 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 224 (394)
+..++..+...|++++|+..+++++... ..|+.+ .++..+|.++...|++++|+..+++
T Consensus 68 ~~~la~~~~~~~~~~~A~~~l~~ll~~~-----~~P~~~---~~~~~la~~~~~~g~~~~Al~~l~~------------- 126 (291)
T 3mkr_A 68 VRMFAEYLASHSRRDAIVAELDREMSRS-----VDVTNT---TFLLMAASIYFYDQNPDAALRTLHQ------------- 126 (291)
T ss_dssp HHHHHHHHHCSTTHHHHHHHHHHHHHSC-----CCCSCH---HHHHHHHHHHHHTTCHHHHHHHHTT-------------
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHhcc-----cCCCCH---HHHHHHHHHHHHCCCHHHHHHHHhC-------------
Confidence 8899999999999999999999987621 123333 3468899999999999999999875
Q ss_pred ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHH--HHHHHHhhcChHHHHHHHHHHHHHHHH
Q 016124 225 PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLH--LGITLYHLNRDKEAEKLVLEALYIREI 302 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~--la~~~~~~g~~~~A~~~~~~a~~~~~~ 302 (394)
|....++..+|.++..+|++++|+..+++++... |........ +..++...|++++|+..|+++++..
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~--------p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~-- 196 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQD--------EDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKC-- 196 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHS--
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--------cCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhC--
Confidence 3445688899999999999999999999998841 222222111 2234445699999999999998753
Q ss_pred HcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchh-hhhhHHHH
Q 016124 303 AFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEE-KFPLKKRL 381 (394)
Q Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~-A~~~~~~a 381 (394)
|....++..+|.++...|+++ +|...++++++. +|+...++.++|.++...|++.+ +..+++++
T Consensus 197 ------p~~~~~~~~la~~~~~~g~~~-eA~~~l~~al~~--------~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~ 261 (291)
T 3mkr_A 197 ------SPTLLLLNGQAACHMAQGRWE-AAEGVLQEALDK--------DSGHPETLINLVVLSQHLGKPPEVTNRYLSQL 261 (291)
T ss_dssp ------CCCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred ------CCcHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 344568999999999999999 999999999985 34456678999999999999976 57899999
Q ss_pred HHHHHHHHH
Q 016124 382 SNLRMKYKQ 390 (394)
Q Consensus 382 ~~~~~~~~~ 390 (394)
+++.++...
T Consensus 262 ~~~~P~~~~ 270 (291)
T 3mkr_A 262 KDAHRSHPF 270 (291)
T ss_dssp HHHCTTCHH
T ss_pred HHhCCCChH
Confidence 988776543
No 54
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.90 E-value=2.2e-21 Score=158.81 Aligned_cols=223 Identities=13% Similarity=0.035 Sum_probs=170.6
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHH
Q 016124 63 GMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVG 142 (394)
Q Consensus 63 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 142 (394)
..|.+|...|++++|+..|++++.+..... +.+..+.++.++|.+|...|++++|+.+|++++.+.... .+....+
T Consensus 42 ~a~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a 117 (292)
T 1qqe_A 42 QAATIYRLRKELNLAGDSFLKAADYQKKAG--NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGA 117 (292)
T ss_dssp HHHHHHHHTTCTHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHH
Confidence 336678889999999999999999987653 345567899999999999999999999999999998764 2344567
Q ss_pred HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhC
Q 016124 143 MAMCSLAHAKCAN-GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKG 221 (394)
Q Consensus 143 ~~~~~la~~~~~~-g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 221 (394)
.++.++|.+|... |++++|+.+|++++++.+.. .+......++.++|.++..+|++++|+.+|++++.+.....
T Consensus 118 ~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~----~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~- 192 (292)
T 1qqe_A 118 NFKFELGEILENDLHDYAKAIDCYELAGEWYAQD----QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR- 192 (292)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT-
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC----CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC-
Confidence 7899999999996 99999999999999998753 24445567789999999999999999999999998632110
Q ss_pred CCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH--hhcChHHHHHHHHHHH
Q 016124 222 KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY--HLNRDKEAEKLVLEAL 297 (394)
Q Consensus 222 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~--~~g~~~~A~~~~~~a~ 297 (394)
........++.++|.++...|++++|+..+++++.+..... .......+..++..+. ..+++++|+..|++++
T Consensus 193 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~~ 267 (292)
T 1qqe_A 193 LSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA---DSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFM 267 (292)
T ss_dssp TTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------------HHHHHHHHHHHHTTCTTTHHHHHHHHTTSS
T ss_pred cccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC---CcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCC
Confidence 00013345788999999999999999999999987432221 1112334556666664 4566777777776654
No 55
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.89 E-value=3e-21 Score=159.20 Aligned_cols=248 Identities=9% Similarity=-0.012 Sum_probs=192.8
Q ss_pred HhCcHHHHHHHHHHHHHHHHH-hh--CCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHH
Q 016124 112 KEGKAVDAESVFSRILKIYTK-VY--GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENM 188 (394)
Q Consensus 112 ~~g~~~~A~~~~~~al~~~~~-~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 188 (394)
..|++++|..+++++...... .+ +++.......+...+.+|...|++++|+..|.+++++..+. .+......+
T Consensus 3 ~~~~~~eA~~~~~~a~k~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~a~~ 78 (307)
T 2ifu_A 3 AAQKISEAHEHIAKAEKYLKTSFMKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANN----RSLFHAAKA 78 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCCSSSCSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHccccccCCCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc----CCHHHHHHH
Confidence 357788888888888776543 12 23334455567777889999999999999999999998764 356667888
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCc
Q 016124 189 RIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS 268 (394)
Q Consensus 189 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 268 (394)
+.++|.+|..+|++++|+.+|++++.+..... +....+.++.++|.+|.. |++++|+.+|++++.+.... .+...
T Consensus 79 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~~ 153 (307)
T 2ifu_A 79 FEQAGMMLKDLQRMPEAVQYIEKASVMYVENG--TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLRQ 153 (307)
T ss_dssp HHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChhH
Confidence 99999999999999999999999999876543 233457889999999999 99999999999999987653 22234
Q ss_pred chHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcC
Q 016124 269 ISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFG 348 (394)
Q Consensus 269 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~ 348 (394)
...++.++|.++...|++++|+.+|++++.+.... +..+.....+..++.++...|+++ +|+.+|++++ +.... .
T Consensus 154 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~g~~~~~~g~~~-~A~~~~~~al-~~p~~-~ 228 (307)
T 2ifu_A 154 AAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM--ENYPTCYKKCIAQVLVQLHRADYV-AAQKCVRESY-SIPGF-S 228 (307)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHT-TSTTS-T
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc--CChhHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHh-CCCCC-C
Confidence 56788999999999999999999999999988664 233455668889999999999999 9999999998 54321 1
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCchhhhh
Q 016124 349 SESEEVMLTLKKVVSYLDKLGRKEEKFP 376 (394)
Q Consensus 349 ~~~~~~~~~~~~la~~~~~~g~~~~A~~ 376 (394)
.......+..++..+ ..|+.+.+..
T Consensus 229 --~~~e~~~l~~l~~~~-~~~d~~~~~~ 253 (307)
T 2ifu_A 229 --GSEDCAALEDLLQAY-DEQDEEQLLR 253 (307)
T ss_dssp --TSHHHHHHHHHHHHH-HTTCHHHHHH
T ss_pred --CCHHHHHHHHHHHHH-HhcCHHHHHH
Confidence 123344566667666 4566554443
No 56
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.89 E-value=7.4e-21 Score=155.65 Aligned_cols=230 Identities=12% Similarity=0.097 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
....+...|.+|...|++++|+..|++++.+..+. .+.+..+.++.++|.+|...|++++|+.+|++++.+.....
T Consensus 36 A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g-- 111 (292)
T 1qqe_A 36 AADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA--GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG-- 111 (292)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC--
Confidence 45567888999999999999999999999998764 34456788999999999999999999999999999987643
Q ss_pred CCcchHhhhHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 95 ESADLVLPLFSLGSLFIKE-GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
+....+.++.++|.+|... |++++|+.+|++++++.+.. .+......++.++|.++..+|++++|+.+|++++++..
T Consensus 112 ~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~--~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 112 QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD--QSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC--CChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 3344577899999999996 99999999999999997653 12334467899999999999999999999999998753
Q ss_pred hcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH--HcccHHHHHHHH
Q 016124 174 DSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS--RSKNFVEAERLL 251 (394)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~--~~g~~~~A~~~~ 251 (394)
.. .........++.++|.++...|++++|+..+++++.+..... .......+..++..+. ..+++++|+..|
T Consensus 190 ~~---~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~---~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~ 263 (292)
T 1qqe_A 190 GN---RLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA---DSRESNFLKSLIDAVNEGDSEQLSEHCKEF 263 (292)
T ss_dssp SC---TTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC------------HHHHHHHHHHHHTTCTTTHHHHHHHH
T ss_pred cC---CcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC---CcHHHHHHHHHHHHHHcCCHHHHHHHHHHh
Confidence 32 111123345678999999999999999999999987643322 1112334555666664 456788887777
Q ss_pred HHHHH
Q 016124 252 RICLD 256 (394)
Q Consensus 252 ~~a~~ 256 (394)
++++.
T Consensus 264 ~~~~~ 268 (292)
T 1qqe_A 264 DNFMR 268 (292)
T ss_dssp TTSSC
T ss_pred ccCCc
Confidence 65543
No 57
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.89 E-value=1e-21 Score=156.69 Aligned_cols=203 Identities=14% Similarity=0.163 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
..+..+..+|..+...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++..
T Consensus 21 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------ 86 (243)
T 2q7f_A 21 MASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFYDKALEL------ 86 (243)
T ss_dssp ---------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred hHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc------
Confidence 45677889999999999999999999999874 4556788999999999999999999999999986
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.|....++..+|.++...|++++|+.+++++++... .. ..++..+|.++...|++++|+.++++++..
T Consensus 87 --~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 87 --DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGM-------EN---GDLFYMLGTVLVKLEQPKLALPYLQRAVEL 154 (243)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-------CS---HHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred --CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-------CC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 234456788999999999999999999999998642 22 235688999999999999999999999875
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLE 295 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (394)
.|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|..++++
T Consensus 155 --------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 218 (243)
T 2q7f_A 155 --------NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGHADAFYNAGVTYAYKENREKALEMLDK 218 (243)
T ss_dssp --------CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred --------CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3445668899999999999999999999999884 345567889999999999999999999999
Q ss_pred HHHHH
Q 016124 296 ALYIR 300 (394)
Q Consensus 296 a~~~~ 300 (394)
++++.
T Consensus 219 ~~~~~ 223 (243)
T 2q7f_A 219 AIDIQ 223 (243)
T ss_dssp HHHHC
T ss_pred HHccC
Confidence 98854
No 58
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.89 E-value=1.1e-21 Score=156.63 Aligned_cols=219 Identities=15% Similarity=0.202 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
.+..+..+|..+...|++++|+.+|++++.. .|....++..+|.++...|++++|+..+++++..
T Consensus 22 ~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 86 (243)
T 2q7f_A 22 ASMTGGQQMGRGSEFGDYEKAAEAFTKAIEE--------NKEDAIPYINFANLLSSVNELERALAFYDKALEL------- 86 (243)
T ss_dssp --------------------CCTTHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-------
Confidence 4667889999999999999999999999874 2334667889999999999999999999999986
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|....++..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+.+++++++...
T Consensus 87 -~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~- 156 (243)
T 2q7f_A 87 -DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAG--------MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNE- 156 (243)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT--------CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCT-
T ss_pred -CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-
Confidence 34567888999999999999999999999999862 22345788999999999999999999999998642
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 016124 175 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRIC 254 (394)
Q Consensus 175 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 254 (394)
+. ..++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|..+++++
T Consensus 157 ------~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 219 (243)
T 2q7f_A 157 ------ND---TEARFQFGMCLANEGMLDEALSQFAAVTEQ--------DPGHADAFYNAGVTYAYKENREKALEMLDKA 219 (243)
T ss_dssp ------TC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred ------cc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 22 335688999999999999999999999875 3445678899999999999999999999999
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHhh
Q 016124 255 LDIMTKTVGPDDQSISFPMLHLGITLYHL 283 (394)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 283 (394)
+++ .|....++..++.+....
T Consensus 220 ~~~--------~p~~~~~~~~~~~l~~~~ 240 (243)
T 2q7f_A 220 IDI--------QPDHMLALHAKKLLGHHH 240 (243)
T ss_dssp HHH--------CTTCHHHHHHHTC-----
T ss_pred Hcc--------CcchHHHHHHHHHHHhhc
Confidence 984 345555666665554433
No 59
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.89 E-value=3.6e-20 Score=148.61 Aligned_cols=205 Identities=12% Similarity=0.056 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
..+.++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++..
T Consensus 35 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~------ 100 (252)
T 2ho1_A 35 EARDAYIQLGLGYLQRGNTEQAKVPLRKALEI--------DPSSADAHAALAVVFQTEMEPKLADEEYRKALAS------ 100 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHHHHhc--------CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------
Confidence 34888999999999999999999999999986 3455788999999999999999999999999986
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.|....++..+|.++...|++++|+.++++++. . +..+....++..+|.++...|++++|+.++++++..
T Consensus 101 --~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~-~-------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 170 (252)
T 2ho1_A 101 --DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ-D-------TLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL 170 (252)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT-C-------TTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh-C-------ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 233456788999999999999999999999886 1 112223456788999999999999999999999875
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLE 295 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (394)
.|....++..+|.++...|++++|...+++++. ..|.....+..++.++...|++++|..++++
T Consensus 171 --------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~ 234 (252)
T 2ho1_A 171 --------NRNQPSVALEMADLLYKEREYVPARQYYDLFAQ--------GGGQNARSLLLGIRLAKVFEDRDTAASYGLQ 234 (252)
T ss_dssp --------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT--------TSCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred --------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--------hCcCcHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 344567889999999999999999999999876 2455677888999999999999999999999
Q ss_pred HHHHH
Q 016124 296 ALYIR 300 (394)
Q Consensus 296 a~~~~ 300 (394)
+++..
T Consensus 235 ~~~~~ 239 (252)
T 2ho1_A 235 LKRLY 239 (252)
T ss_dssp HHHHC
T ss_pred HHHHC
Confidence 98754
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.88 E-value=9.7e-22 Score=159.95 Aligned_cols=260 Identities=14% Similarity=0.032 Sum_probs=198.0
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchH
Q 016124 21 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 100 (394)
Q Consensus 21 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 100 (394)
.++......|++++|+..+++++... ..++|....++..+|.++...|++++|+..|++++.. .|...
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~ 77 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILASR----ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMP 77 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCH
T ss_pred ceeeccCccchHHHHHHHHHHHHhcc----cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcH
Confidence 34555667799999999999998752 2345678889999999999999999999999999987 45567
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCC
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSL 180 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 180 (394)
.++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++++..
T Consensus 78 ~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~------- 142 (275)
T 1xnf_A 78 EVFNYLGIYLTQAGNFDAAYEAFDSVLEL--------DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDP------- 142 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-------
Confidence 88999999999999999999999999987 233356789999999999999999999999998642
Q ss_pred chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh
Q 016124 181 DDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 181 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 260 (394)
+.+... . ...+....|++++|+..+++++... +..+. ...++.++...++.++|+..+++++.....
T Consensus 143 ~~~~~~---~-~~~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 209 (275)
T 1xnf_A 143 NDPFRS---L-WLYLAEQKLDEKQAKEVLKQHFEKS-----DKEQW----GWNIVEFYLGNISEQTLMERLKADATDNTS 209 (275)
T ss_dssp TCHHHH---H-HHHHHHHHHCHHHHHHHHHHHHHHS-----CCCST----HHHHHHHHTTSSCHHHHHHHHHHHCCSHHH
T ss_pred CChHHH---H-HHHHHHHhcCHHHHHHHHHHHHhcC-----CcchH----HHHHHHHHHHhcCHHHHHHHHHHHhccccc
Confidence 222211 2 2234466799999999999988752 12221 234777888899999999999888763322
Q ss_pred hcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHH
Q 016124 261 TVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELL 336 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~ 336 (394)
. .+....++..+|.++...|++++|+.++++++... |++. ...+.++...|+++ +|++.+
T Consensus 210 ~----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-----p~~~------~~~~~~~~~l~~~~-~a~~~~ 269 (275)
T 1xnf_A 210 L----AEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN-----VHNF------VEHRYALLELSLLG-QDQDDL 269 (275)
T ss_dssp H----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CTTC------HHHHHHHHHHHHHH-HC----
T ss_pred c----cccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC-----chhH------HHHHHHHHHHHHHH-hhHHHH
Confidence 1 22346788999999999999999999999998743 3222 23356677777777 777665
No 61
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.88 E-value=3.5e-21 Score=168.15 Aligned_cols=219 Identities=16% Similarity=0.100 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHH
Q 016124 34 KSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRA-KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK 112 (394)
Q Consensus 34 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (394)
.....+++++...+.... ..+..+.++..+|.++...|++ ++|+..|++++++ .|....++..+|.+|..
T Consensus 79 ~~~~~~~~al~~l~~~~~-~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~ 149 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLG-SAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWK 149 (474)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHH
Confidence 444556666665554432 2345677899999999999999 9999999999987 46667899999999999
Q ss_pred hCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHC---------CCHHHHHHHHHHHHHHHHhcccCCCchH
Q 016124 113 EGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN---------GNAEEAVELYKKALRVIKDSNYMSLDDS 183 (394)
Q Consensus 113 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~---------g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 183 (394)
.|++++|+.+|++++++ .|. ..++.++|.++... |++++|+..+++++++.. +.
T Consensus 150 ~g~~~~A~~~~~~al~~--------~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p-------~~- 212 (474)
T 4abn_A 150 KGDVTSAHTCFSGALTH--------CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDV-------LD- 212 (474)
T ss_dssp HTCHHHHHHHHHHHHTT--------CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCT-------TC-
T ss_pred cCCHHHHHHHHHHHHhh--------CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCC-------CC-
Confidence 99999999999999976 233 47899999999999 999999999999999742 22
Q ss_pred HHHHHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHhhCCCCc---cHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 184 IMENMRIDLAELLHIV--------GRGQEGRELLEECLLITEKYKGKEHP---SFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 184 ~~~~~~~~la~~~~~~--------g~~~~A~~~~~~a~~~~~~~~~~~~~---~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
..++.++|.++... |++++|+..|++++.+ .| ....++.++|.++...|++++|+..|+
T Consensus 213 --~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 282 (474)
T 4abn_A 213 --GRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV--------DRKASSNPDLHLNRATLHKYEESYGEALEGFS 282 (474)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH--------CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh--------CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34678999999999 9999999999999986 34 678899999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 296 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (394)
+++.+ .|....++..++.++...|++++|+..+.+.
T Consensus 283 ~al~l--------~p~~~~a~~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 283 QAAAL--------DPAWPEPQQREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp HHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99985 4666788999999999999999998876543
No 62
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.88 E-value=4e-20 Score=148.35 Aligned_cols=207 Identities=13% Similarity=0.046 Sum_probs=177.2
Q ss_pred CchHH-HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 016124 11 DEPLL-DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 89 (394)
Q Consensus 11 ~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 89 (394)
.+|.. +.++..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+..+++++..
T Consensus 31 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-- 100 (252)
T 2ho1_A 31 KGRDEARDAYIQLGLGYLQRGNTEQAKVPLRKALEID--------PSSADAHAALAVVFQTEMEPKLADEEYRKALAS-- 100 (252)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred cchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC--------CChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--
Confidence 34554 8889999999999999999999999999862 333567889999999999999999999999987
Q ss_pred HhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 016124 90 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 169 (394)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 169 (394)
.|....++..+|.++...|++++|+.++++++. .+..|....++..+|.++...|++++|+.++++++
T Consensus 101 ------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 168 (252)
T 2ho1_A 101 ------DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSL 168 (252)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 344567889999999999999999999999886 12356677789999999999999999999999999
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHH
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAER 249 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 249 (394)
+.. +.. ..++..+|.++...|++++|+.++++++.. .|.....+..++.++...|++++|..
T Consensus 169 ~~~-------~~~---~~~~~~la~~~~~~g~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~A~~ 230 (252)
T 2ho1_A 169 RLN-------RNQ---PSVALEMADLLYKEREYVPARQYYDLFAQG--------GGQNARSLLLGIRLAKVFEDRDTAAS 230 (252)
T ss_dssp HHC-------SCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------SCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcC-------ccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHccCHHHHHH
Confidence 863 222 345688999999999999999999998763 34556778899999999999999999
Q ss_pred HHHHHHHH
Q 016124 250 LLRICLDI 257 (394)
Q Consensus 250 ~~~~a~~~ 257 (394)
++++++..
T Consensus 231 ~~~~~~~~ 238 (252)
T 2ho1_A 231 YGLQLKRL 238 (252)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999884
No 63
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.88 E-value=6.2e-21 Score=155.18 Aligned_cols=258 Identities=13% Similarity=0.031 Sum_probs=195.4
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHH
Q 016124 65 AKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA 144 (394)
Q Consensus 65 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 144 (394)
+......|++++|+..+++++... ..++|....++..+|.++...|++++|+.+|++++.. .|....+
T Consensus 12 ~~~~~~~~~~~~A~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~ 79 (275)
T 1xnf_A 12 AVPLQPTLQQEVILARMEQILASR----ALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI--------RPDMPEV 79 (275)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCCCHHH
T ss_pred eeccCccchHHHHHHHHHHHHhcc----cccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc--------CCCcHHH
Confidence 334456689999999999988751 1234567889999999999999999999999999987 3334567
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCC
Q 016124 145 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEH 224 (394)
Q Consensus 145 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 224 (394)
+..+|.++...|++++|+.++++++++... . ..++..+|.++...|++++|+.++++++... +++
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~al~~~~~-------~---~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-----~~~ 144 (275)
T 1xnf_A 80 FNYLGIYLTQAGNFDAAYEAFDSVLELDPT-------Y---NYAHLNRGIALYYGGRDKLAQDDLLAFYQDD-----PND 144 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-------C---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCcc-------c---cHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----CCC
Confidence 899999999999999999999999986422 2 3466899999999999999999999998852 222
Q ss_pred ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHc
Q 016124 225 PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAF 304 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 304 (394)
......++ +....|++++|+..+++++... +.. .. ...++.++...++.++|+..+++++......
T Consensus 145 ---~~~~~~~~-~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~- 210 (275)
T 1xnf_A 145 ---PFRSLWLY-LAEQKLDEKQAKEVLKQHFEKS-----DKE---QW-GWNIVEFYLGNISEQTLMERLKADATDNTSL- 210 (275)
T ss_dssp ---HHHHHHHH-HHHHHHCHHHHHHHHHHHHHHS-----CCC---ST-HHHHHHHHTTSSCHHHHHHHHHHHCCSHHHH-
T ss_pred ---hHHHHHHH-HHHHhcCHHHHHHHHHHHHhcC-----Ccc---hH-HHHHHHHHHHhcCHHHHHHHHHHHhcccccc-
Confidence 22222333 4467799999999999988742 121 22 2457778888999999999999887654321
Q ss_pred CCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhH
Q 016124 305 GKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLK 378 (394)
Q Consensus 305 ~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 378 (394)
.+....++..+|.++...|+++ +|+.+|++++.+. +.+ +...+.++...|++++|++.+
T Consensus 211 ---~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~-----p~~------~~~~~~~~~~l~~~~~a~~~~ 269 (275)
T 1xnf_A 211 ---AEHLSETNFYLGKYYLSLGDLD-SATALFKLAVANN-----VHN------FVEHRYALLELSLLGQDQDDL 269 (275)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHTTC-----CTT------CHHHHHHHHHHHHHHHC----
T ss_pred ---cccccHHHHHHHHHHHHcCCHH-HHHHHHHHHHhCC-----chh------HHHHHHHHHHHHHHHhhHHHH
Confidence 1344678999999999999999 9999999998642 222 123366788899999998887
No 64
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.88 E-value=2e-20 Score=142.41 Aligned_cols=168 Identities=15% Similarity=0.144 Sum_probs=148.2
Q ss_pred hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC
Q 016124 99 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
.+.++.++|.++...|++++|+..|++++++ +|....++..+|.++...|++++|+..+.+++....
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~----- 70 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDT----- 70 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc-----
Confidence 4678999999999999999999999999987 455567899999999999999999999999988632
Q ss_pred CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q 016124 179 SLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 258 (394)
Q Consensus 179 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 258 (394)
+. ..++..+|.++...++++.|...+.+++.. .|....++..+|.++...|++++|+..|++++++
T Consensus 71 --~~---~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~--------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~- 136 (184)
T 3vtx_A 71 --TS---AEAYYILGSANFMIDEKQAAIDALQRAIAL--------NTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI- 136 (184)
T ss_dssp --CC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred --hh---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh-
Confidence 22 345578999999999999999999999875 4556678899999999999999999999999984
Q ss_pred HhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 259 TKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 259 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
+|....++.++|.++...|++++|+..|++++++.
T Consensus 137 -------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 171 (184)
T 3vtx_A 137 -------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKE 171 (184)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred -------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCC
Confidence 46778899999999999999999999999999853
No 65
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.88 E-value=3.9e-21 Score=174.09 Aligned_cols=176 Identities=21% Similarity=0.265 Sum_probs=157.3
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
..|+.+.+++++|.++..+|++++|+.+|++++++ .|....++.++|.++..+|++++|+..|++++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--- 72 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--- 72 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 57889999999999999999999999999999987 2445678999999999999999999999999997
Q ss_pred hcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.|....++.++|.++..+|++++|+..|++++++ +|....++.++|.++..+|++++|+..|+++++
T Consensus 73 -----~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~ 139 (723)
T 4gyw_A 73 -----SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------NPAFADAHSNLASIHKDSGNIPEAIASYRTALK 139 (723)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999987 456677899999999999999999999999999
Q ss_pred HHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhh
Q 016124 171 VIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYK 220 (394)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 220 (394)
+. |+. ..++.++|.++...|++++|++.+++++++.....
T Consensus 140 l~-------P~~---~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 140 LK-------PDF---PDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HC-------SCC---HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred hC-------CCC---hHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 73 333 45678999999999999999999999999876543
No 66
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.88 E-value=7.7e-20 Score=143.94 Aligned_cols=206 Identities=11% Similarity=0.016 Sum_probs=173.8
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
.|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|..++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~---- 71 (225)
T 2vq2_A 4 ANQVSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSI---- 71 (225)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHh----
Confidence 4566788999999999999999999999999986 3455778999999999999999999999999986
Q ss_pred hCCCchHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 134 YGENDGRVGMAMCSLAHAKCAN-GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
.|....++..+|.++... |++++|+.+++++++ . +..+....++..+|.++...|++++|+.+++++
T Consensus 72 ----~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~-~-------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~ 139 (225)
T 2vq2_A 72 ----KPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA-D-------PTYPTPYIANLNKGICSAKQGQFGLAEAYLKRS 139 (225)
T ss_dssp ----CTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT-S-------TTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ----CCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc-C-------cCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 233455788999999999 999999999999987 1 112222456688999999999999999999999
Q ss_pred HHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHhhcChHHHHH
Q 016124 213 LLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEK 291 (394)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~ 291 (394)
+.. .|....++..+|.++...|++++|...+++++... | .....+..++.++...|+.++|..
T Consensus 140 ~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~ 203 (225)
T 2vq2_A 140 LAA--------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRV--------EVLQADDLLLGWKIAKALGNAQAAYE 203 (225)
T ss_dssp HHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHh--------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCCCHHHHHHHHHHHHhcCcHHHHHH
Confidence 875 34456788999999999999999999999998842 3 445567788899999999999999
Q ss_pred HHHHHHHH
Q 016124 292 LVLEALYI 299 (394)
Q Consensus 292 ~~~~a~~~ 299 (394)
+++.+...
T Consensus 204 ~~~~~~~~ 211 (225)
T 2vq2_A 204 YEAQLQAN 211 (225)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99887664
No 67
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.88 E-value=1.7e-19 Score=141.92 Aligned_cols=207 Identities=15% Similarity=0.083 Sum_probs=174.7
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
..|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~- 73 (225)
T 2vq2_A 3 KANQVSNIKTQLAMEYMRGQDYRQATASIEDALKS--------DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKP- 73 (225)
T ss_dssp -CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-
T ss_pred CCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-
Confidence 35677889999999999999999999999999986 233356788999999999999999999999998632
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHH
Q 016124 175 SNYMSLDDSIMENMRIDLAELLHIV-GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRI 253 (394)
Q Consensus 175 ~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 253 (394)
+. ..++..+|.++... |++++|+.++++++. .+..|....++..+|.++...|++++|+.++++
T Consensus 74 ------~~---~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 138 (225)
T 2vq2_A 74 ------DS---AEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKR 138 (225)
T ss_dssp ------TC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ------CC---hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 22 34568899999999 999999999999886 234677788899999999999999999999999
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCC-CChhHHHHHHHHHHHHHHhCCCchHH
Q 016124 254 CLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGK-DSLPVGEALDCLVSIQTRLGEDDTKL 332 (394)
Q Consensus 254 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~A 332 (394)
++.. .|....++..+|.++...|++++|...+++++... + ++ ...+..++.++...|+.+ +|
T Consensus 139 ~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~-~a 201 (225)
T 2vq2_A 139 SLAA--------QPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRV-----EVLQ---ADDLLLGWKIAKALGNAQ-AA 201 (225)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHH-HH
T ss_pred HHHh--------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCC---HHHHHHHHHHHHhcCcHH-HH
Confidence 9884 34556788999999999999999999999998865 3 33 345677888889999988 89
Q ss_pred HHHHHHHHHH
Q 016124 333 LELLKRVLRI 342 (394)
Q Consensus 333 ~~~~~~al~~ 342 (394)
..+++.+...
T Consensus 202 ~~~~~~~~~~ 211 (225)
T 2vq2_A 202 YEYEAQLQAN 211 (225)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888887754
No 68
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.88 E-value=2.9e-20 Score=141.51 Aligned_cols=166 Identities=17% Similarity=0.264 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
..+++.+|.++...|++++|+..|++++++ +|....++..+|.++...|++++|+..+.+++..
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~-------- 68 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLKA--------DPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVL-------- 68 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------
Confidence 467899999999999999999999999987 5667889999999999999999999999999876
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
.|....++..+|.++...++++.|...+.+++.+.. +. ..++..+|.++...|++++|+..|++++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~-------~~---~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~-- 136 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNT-------VY---ADAYYKLGLVYDSMGEHDKAIEAYEKTISI-- 136 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc-------cc---hHHHHHHHHHHHHhCCchhHHHHHHHHHHh--
Confidence 334456788899999999999999999999998642 22 345688999999999999999999999986
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
+|....++.++|.+|...|++++|+..|++++++
T Consensus 137 ------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 137 ------KPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred ------cchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 4667789999999999999999999999999984
No 69
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.87 E-value=7.3e-21 Score=172.32 Aligned_cols=176 Identities=16% Similarity=0.252 Sum_probs=158.2
Q ss_pred chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 53 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 53 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
..|..+.+++++|.++..+|++++|+..|++++++ .|....++.++|.++..+|++++|+..|++++++
T Consensus 4 s~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--- 72 (723)
T 4gyw_A 4 SCPTHADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--- 72 (723)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred CCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---
Confidence 35788899999999999999999999999999997 5777899999999999999999999999999987
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
+|....++.++|.++..+|++++|+..|++++++.. +. ..++.++|.++..+|++++|+..|+++
T Consensus 73 -----~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P-------~~---~~a~~~Lg~~~~~~g~~~eAi~~~~~A 137 (723)
T 4gyw_A 73 -----SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINP-------AF---ADAHSNLASIHKDSGNIPEAIASYRTA 137 (723)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CC---HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456677899999999999999999999999999742 22 457799999999999999999999999
Q ss_pred HHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhc
Q 016124 213 LLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTV 262 (394)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 262 (394)
+++ .|....++.++|.++...|++++|.+.+++++++.....
T Consensus 138 l~l--------~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~~~ 179 (723)
T 4gyw_A 138 LKL--------KPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQL 179 (723)
T ss_dssp HHH--------CSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHHH
T ss_pred HHh--------CCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChhHH
Confidence 986 567788999999999999999999999999999876543
No 70
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.87 E-value=1.9e-20 Score=163.60 Aligned_cols=221 Identities=14% Similarity=0.016 Sum_probs=183.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcH-HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH
Q 016124 76 KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA-VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA 154 (394)
Q Consensus 76 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 154 (394)
.....+++++...+.... ..+..+.++..+|.++...|++ ++|+.+|++++++ .|....++..+|.+|..
T Consensus 79 ~~~~~~~~al~~l~~~~~-~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~ 149 (474)
T 4abn_A 79 DVQEEMEKTLQQMEEVLG-SAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKL--------EPELVEAWNQLGEVYWK 149 (474)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHH
Confidence 344445555555544332 4567788999999999999999 9999999999987 34556789999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHc---------CChHHHHHHHHHHHHHHHHhhCCCCc
Q 016124 155 NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV---------GRGQEGRELLEECLLITEKYKGKEHP 225 (394)
Q Consensus 155 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~---------g~~~~A~~~~~~a~~~~~~~~~~~~~ 225 (394)
.|++++|+.+|++++++ .|+ ..++.++|.++... |++++|+..+++++++ .|
T Consensus 150 ~g~~~~A~~~~~~al~~-------~p~----~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p 210 (474)
T 4abn_A 150 KGDVTSAHTCFSGALTH-------CKN----KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM--------DV 210 (474)
T ss_dssp HTCHHHHHHHHHHHHTT-------CCC----HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH--------CT
T ss_pred cCCHHHHHHHHHHHHhh-------CCC----HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh--------CC
Confidence 99999999999999984 234 25678999999999 9999999999999986 45
Q ss_pred cHHHHHHHHHHHHHHc--------ccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 016124 226 SFVTHLLNLAASYSRS--------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEAL 297 (394)
Q Consensus 226 ~~~~~~~~la~~~~~~--------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 297 (394)
....++.++|.++... |++++|+..|++++.+. +..+....++.++|.++...|++++|+..|++++
T Consensus 211 ~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 285 (474)
T 4abn_A 211 LDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVD-----RKASSNPDLHLNRATLHKYEESYGEALEGFSQAA 285 (474)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhC-----CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 6678899999999999 99999999999999852 1112778899999999999999999999999999
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHH
Q 016124 298 YIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKR 338 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~ 338 (394)
++. |....++..++.++...|+++ +|++.+.+
T Consensus 286 ~l~--------p~~~~a~~~l~~~~~~lg~~~-eAi~~~~~ 317 (474)
T 4abn_A 286 ALD--------PAWPEPQQREQQLLEFLSRLT-SLLESKGK 317 (474)
T ss_dssp HHC--------TTCHHHHHHHHHHHHHHHHHH-HHHHHTTT
T ss_pred HhC--------CCCHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence 864 444567889999999999888 88776544
No 71
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.87 E-value=2.1e-20 Score=150.63 Aligned_cols=212 Identities=13% Similarity=0.063 Sum_probs=179.8
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+.....++.+|..+...|++++|+..|+++++. .|+++....++..+|.++...|++++|+..|++++...
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~-------~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-- 82 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY-------GRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-- 82 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG-------CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC--
Confidence 344567899999999999999999999999874 34555556778999999999999999999999999863
Q ss_pred hhCCCCccHHHHHHHHHHHHHH--------cccHHHHHHHHHHHHHHHHhhcCCCCCcchHHH--------------HHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSR--------SKNFVEAERLLRICLDIMTKTVGPDDQSISFPM--------------LHL 276 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~--------~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~--------------~~l 276 (394)
++++....++..+|.++.. .|++++|+..|++++... ++++....+. ..+
T Consensus 83 ---p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~~~~~~~~~~~~~~~l 154 (261)
T 3qky_A 83 ---QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-----PNHELVDDATQKIRELRAKLARKQYEA 154 (261)
T ss_dssp ---TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-----cCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999 999999999999999853 4445555454 889
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHh----------CCCchHHHHHHHHHHHHHHhh
Q 016124 277 GITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRL----------GEDDTKLLELLKRVLRIQERE 346 (394)
Q Consensus 277 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~~A~~~~~~al~~~~~~ 346 (394)
|.+|...|++++|+..|++++... |+++....++..+|.++... |+++ +|+..|+++++..
T Consensus 155 a~~~~~~g~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~-~A~~~~~~~~~~~--- 225 (261)
T 3qky_A 155 ARLYERRELYEAAAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRARQPERYR-RAVELYERLLQIF--- 225 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHH-HHHHHHHHHHHHC---
T ss_pred HHHHHHccCHHHHHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhhcccchHH-HHHHHHHHHHHHC---
Confidence 999999999999999999999865 66666788999999999987 7778 9999999998753
Q ss_pred cCCCCHHHHHHHHHHHHHHHHhcCchhhhhhH
Q 016124 347 FGSESEEVMLTLKKVVSYLDKLGRKEEKFPLK 378 (394)
Q Consensus 347 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 378 (394)
++++....+...++.++...++++++..+.
T Consensus 226 --p~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 255 (261)
T 3qky_A 226 --PDSPLLRTAEELYTRARQRLTELEGDASLA 255 (261)
T ss_dssp --TTCTHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred --CCChHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 667888889999999999999998877654
No 72
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.87 E-value=2e-20 Score=150.83 Aligned_cols=210 Identities=15% Similarity=0.107 Sum_probs=175.2
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|..+..++.+|..++..|++++|+..|++++.. .++++....+++.+|.++...|++++|+..|++++..
T Consensus 11 ~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~---- 81 (261)
T 3qky_A 11 RHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTY-----GRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQI---- 81 (261)
T ss_dssp CCSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGG-----CSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----
Confidence 4455677899999999999999999999999875 3455566788999999999999999999999999987
Q ss_pred cCCCCcchHhhhHhHHHHHHH--------hCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHH--------------HHHH
Q 016124 92 RGTESADLVLPLFSLGSLFIK--------EGKAVDAESVFSRILKIYTKVYGENDGRVGMAM--------------CSLA 149 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~--------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~--------------~~la 149 (394)
.++++....+++.+|.++.. .|++++|+..|++++... ++++....+. ..+|
T Consensus 82 -~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~~~~~~~~~~~~~~~la 155 (261)
T 3qky_A 82 -YQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-----PNHELVDDATQKIRELRAKLARKQYEAA 155 (261)
T ss_dssp -CTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-----TTCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-----cCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778899999999999 999999999999999873 3444444444 8899
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHc----------CChHHHHHHHHHHHHHHHHh
Q 016124 150 HAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV----------GRGQEGRELLEECLLITEKY 219 (394)
Q Consensus 150 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----------g~~~~A~~~~~~a~~~~~~~ 219 (394)
.+|...|++++|+..|+++++.. |+++....++..+|.+|... |++++|+..+++++...
T Consensus 156 ~~~~~~g~~~~A~~~~~~~l~~~-------p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~--- 225 (261)
T 3qky_A 156 RLYERRELYEAAAVTYEAVFDAY-------PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF--- 225 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHC-------TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHccCHHHHHHHHHHHHHHC-------CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC---
Confidence 99999999999999999999864 34344456778999999977 89999999999998763
Q ss_pred hCCCCccHHHHHHHHHHHHHHcccHHHHH
Q 016124 220 KGKEHPSFVTHLLNLAASYSRSKNFVEAE 248 (394)
Q Consensus 220 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 248 (394)
++++....+...++.++...++++++.
T Consensus 226 --p~~~~~~~a~~~l~~~~~~~~~~~~~~ 252 (261)
T 3qky_A 226 --PDSPLLRTAEELYTRARQRLTELEGDA 252 (261)
T ss_dssp --TTCTHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred --CCChHHHHHHHHHHHHHHHHHHhhhhh
Confidence 466777788888898888888876654
No 73
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.87 E-value=7.1e-21 Score=164.18 Aligned_cols=152 Identities=10% Similarity=-0.028 Sum_probs=145.6
Q ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHH
Q 016124 233 NLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVG 312 (394)
Q Consensus 233 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 312 (394)
..+..+..+|++++|+.++++++++.++.+|++||.++.++.+||.+|..+|+|++|+.++++++++.+..+|++||.++
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 34555778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Q 016124 313 EALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 313 ~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 385 (394)
.++.+||.+|..+|+++ +|+.+|++|+++.+..+|++||.+..+...++.++..+|++++|...|+++.+-.
T Consensus 394 ~~l~nLa~~~~~~G~~~-eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIE-VGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999999999999999999999999999999986543
No 74
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.86 E-value=1.8e-20 Score=161.60 Aligned_cols=153 Identities=14% Similarity=0.106 Sum_probs=146.1
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSI 269 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 269 (394)
...+..+..+|++++|+.++++++++.++.+|++||.++.++.+||.+|..+|++++|+.++++++++.++.+|++||.+
T Consensus 313 le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~ 392 (490)
T 3n71_A 313 LEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL 392 (490)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 34556677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHH
Q 016124 270 SFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQ 343 (394)
Q Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~ 343 (394)
+.++.+||.+|..+|++++|+.++++|+++.+..+|++||.+......++.++..++.++ +|...|+++.+..
T Consensus 393 a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~-~ae~~~~~~~~~~ 465 (490)
T 3n71_A 393 GMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFR-QNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999987644
No 75
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.84 E-value=1.1e-18 Score=137.59 Aligned_cols=188 Identities=10% Similarity=0.040 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..+..+|.++...|++++|+..|++++.+. ++....++..+|.++...|++++|+.++++++.. .
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~ 72 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLT-------NNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK--------N 72 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-------TTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------T
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhcc-------CCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------C
Confidence 678899999999999999999999999872 2134467778999999999999999999999975 4
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
|....++..+|.++...|++++|+..+++++++.+.. .........++.++|.++...|++++|+..+++++++
T Consensus 73 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--- 146 (228)
T 4i17_A 73 YNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN---ATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--- 146 (228)
T ss_dssp CSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS---
T ss_pred cchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc---HHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc---
Confidence 5667889999999999999999999999999975321 0011234567899999999999999999999999874
Q ss_pred hhCCCCcc--HHHHHHHHHHHHHHcccH---------------------------HHHHHHHHHHHHHHHhhcCCCCCcc
Q 016124 219 YKGKEHPS--FVTHLLNLAASYSRSKNF---------------------------VEAERLLRICLDIMTKTVGPDDQSI 269 (394)
Q Consensus 219 ~~~~~~~~--~~~~~~~la~~~~~~g~~---------------------------~~A~~~~~~a~~~~~~~~~~~~~~~ 269 (394)
+|. ...++.++|.++...|+. ++|+.++++++++ .|..
T Consensus 147 -----~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l--------~p~~ 213 (228)
T 4i17_A 147 -----TSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTL--------SPNR 213 (228)
T ss_dssp -----SCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CTTC
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------CCCC
Confidence 577 788999999999999988 7888888888874 3444
Q ss_pred hHHHHHHHHHH
Q 016124 270 SFPMLHLGITL 280 (394)
Q Consensus 270 ~~~~~~la~~~ 280 (394)
..+...++.+.
T Consensus 214 ~~~~~~l~~i~ 224 (228)
T 4i17_A 214 TEIKQMQDQVK 224 (228)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555555543
No 76
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.83 E-value=1.8e-19 Score=156.38 Aligned_cols=295 Identities=13% Similarity=0.063 Sum_probs=182.8
Q ss_pred HHHHHHHHHHhhhch---HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh-----chhHHHHHHHHHHHHH-
Q 016124 18 ILLHMGSMYSTLENY---EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG-----RAKKAVEIYHRVITIL- 88 (394)
Q Consensus 18 ~~~~l~~~~~~~g~~---~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----~~~~A~~~~~~al~~~- 88 (394)
+++.+|.+|...|++ ++|+.+|+++++. ...+++.+|.++...| ++++|+.+|+++++.-
T Consensus 37 A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~-----------~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~g~ 105 (452)
T 3e4b_A 37 AQVGLADIQVGTRDPAQIKQAEATYRAAADT-----------SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFANGE 105 (452)
T ss_dssp GGGTCC---------------------------------------CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHccCCCCCHHHHHHHHHHHHhC-----------CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 345566666666666 6666666666542 1234556666444443 5666666666665420
Q ss_pred -----------HHhcC--C-----------CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHH
Q 016124 89 -----------ELNRG--T-----------ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMA 144 (394)
Q Consensus 89 -----------~~~~~--~-----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 144 (394)
....+ + ..+....+.+.+|.+|...+.++++.......... . ...+|. +
T Consensus 106 ~~A~~~Lg~~y~~~~~~~~~~~a~~~~~~a~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~---a-~~~~~~---a 178 (452)
T 3e4b_A 106 GNTLIPLAMLYLQYPHSFPNVNAQQQISQWQAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKA---A-LNTTDI---C 178 (452)
T ss_dssp SSCHHHHHHHHHHCGGGCTTCCHHHHHHHHHHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHH---H-TTTCTT---H
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHH---H-HcCCHH---H
Confidence 00000 0 00112345566667777666555554443222222 1 112333 7
Q ss_pred HHHHHHHHHHCC---CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHc----CChHHHHHHHHHHHHHHH
Q 016124 145 MCSLAHAKCANG---NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV----GRGQEGRELLEECLLITE 217 (394)
Q Consensus 145 ~~~la~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~----g~~~~A~~~~~~a~~~~~ 217 (394)
+..+|.+|...| ++++|+.+|+++.+. ++.. ...+.++|.+|... +++++|+.+|+++.
T Consensus 179 ~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~-------g~~~---a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---- 244 (452)
T 3e4b_A 179 YVELATVYQKKQQPEQQAELLKQMEAGVSR-------GTVT---AQRVDSVARVLGDATLGTPDEKTAQALLEKIA---- 244 (452)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHT-------TCSC---HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG----
T ss_pred HHHHHHHHHHcCCcccHHHHHHHHHHHHHC-------CCHH---HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc----
Confidence 889999999999 999999999999874 2222 23347789988665 79999999999875
Q ss_pred HhhCCCCccHHHHHHHHHHH-H--HHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc-----ChHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAAS-Y--SRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN-----RDKEA 289 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~-~--~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----~~~~A 289 (394)
+....+++++|.+ + ...+++++|+.+|+++.+ .....++.+||.+|. .| ++++|
T Consensus 245 -------~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~----------~g~~~A~~~Lg~~y~-~G~g~~~d~~~A 306 (452)
T 3e4b_A 245 -------PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA----------ADQPRAELLLGKLYY-EGKWVPADAKAA 306 (452)
T ss_dssp -------GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH----------TTCHHHHHHHHHHHH-HCSSSCCCHHHH
T ss_pred -------CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH----------CCCHHHHHHHHHHHH-cCCCCCCCHHHH
Confidence 2334678899998 4 578999999999999986 225678899999998 66 99999
Q ss_pred HHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH----hCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Q 016124 290 EKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR----LGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYL 365 (394)
Q Consensus 290 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~ 365 (394)
+.+|+++. ++ ...+.++||.+|.. ..+++ +|+.+|+++.+ ..+ ..+..+||.+|
T Consensus 307 ~~~~~~Aa--------~g---~~~A~~~Lg~~y~~G~g~~~d~~-~A~~~~~~Aa~-------~g~---~~A~~~Lg~~y 364 (452)
T 3e4b_A 307 EAHFEKAV--------GR---EVAADYYLGQIYRRGYLGKVYPQ-KALDHLLTAAR-------NGQ---NSADFAIAQLF 364 (452)
T ss_dssp HHHHHTTT--------TT---CHHHHHHHHHHHHTTTTSSCCHH-HHHHHHHHHHT-------TTC---TTHHHHHHHHH
T ss_pred HHHHHHHh--------CC---CHHHHHHHHHHHHCCCCCCcCHH-HHHHHHHHHHh-------hCh---HHHHHHHHHHH
Confidence 99999886 12 34578899998887 23667 89999998875 222 45678899998
Q ss_pred HH----hcCchhhhhhHHHHHHH
Q 016124 366 DK----LGRKEEKFPLKKRLSNL 384 (394)
Q Consensus 366 ~~----~g~~~~A~~~~~~a~~~ 384 (394)
.. ..++.+|..+|+++.+.
T Consensus 365 ~~G~g~~~d~~~A~~~~~~A~~~ 387 (452)
T 3e4b_A 365 SQGKGTKPDPLNAYVFSQLAKAQ 387 (452)
T ss_dssp HSCTTBCCCHHHHHHHHHHHHTT
T ss_pred HhCCCCCCCHHHHHHHHHHHHHC
Confidence 85 45889999999988754
No 77
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.83 E-value=1.1e-19 Score=157.85 Aligned_cols=281 Identities=12% Similarity=0.072 Sum_probs=153.2
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhch---hHHHHHHHHHHHHHHHhcCCCC
Q 016124 20 LHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRA---KKAVEIYHRVITILELNRGTES 96 (394)
Q Consensus 20 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~---~~A~~~~~~al~~~~~~~~~~~ 96 (394)
..+|..+...|++++|+.+|+++.+. + ...+++.+|.+|...|++ ++|+.+|+++++.
T Consensus 7 ~~la~~~~~~g~~~~A~~~~~~aa~~-----g-----~~~A~~~Lg~~y~~~g~~~d~~~A~~~~~~A~~~--------- 67 (452)
T 3e4b_A 7 QRLANEALKRGDTVTAQQNYQQLAEL-----G-----YSEAQVGLADIQVGTRDPAQIKQAEATYRAAADT--------- 67 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-----T-----CCTGGGTCC----------------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHC-----C-----CHHHHHHHHHHHHccCCCCCHHHHHHHHHHHHhC---------
Confidence 45789999999999999999998764 1 134577889999999998 9999999998753
Q ss_pred cchHhhhHhHHHHHHHhC-----cHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCH-------------
Q 016124 97 ADLVLPLFSLGSLFIKEG-----KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA------------- 158 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g-----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~------------- 158 (394)
.+.+++.+|.++...| ++++|+.+|+++++. +++. ++.++|.+|...+..
T Consensus 68 --~~~A~~~Lg~~~~~~~~~~~~~~~~A~~~~~~Aa~~-------g~~~---A~~~Lg~~y~~~~~~~~~~~a~~~~~~a 135 (452)
T 3e4b_A 68 --SPRAQARLGRLLAAKPGATEAEHHEAESLLKKAFAN-------GEGN---TLIPLAMLYLQYPHSFPNVNAQQQISQW 135 (452)
T ss_dssp -----CHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHT-------TCSS---CHHHHHHHHHHCGGGCTTCCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhCCCCCCcCHHHHHHHHHHHHHC-------CCHH---HHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 3467889999777766 889999999999863 1111 444555555554433
Q ss_pred ----------------------HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcC---ChHHHHHHHHHHH
Q 016124 159 ----------------------EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG---RGQEGRELLEECL 213 (394)
Q Consensus 159 ----------------------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g---~~~~A~~~~~~a~ 213 (394)
+++............ ..++. ++.++|.+|...| ++++|+.+|+++.
T Consensus 136 ~~~g~~~a~~~Lg~~y~~~~~~~~~~~~a~~~~~~a~-----~~~~~----a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa 206 (452)
T 3e4b_A 136 QAAGYPEAGLAQVLLYRTQGTYDQHLDDVERICKAAL-----NTTDI----CYVELATVYQKKQQPEQQAELLKQMEAGV 206 (452)
T ss_dssp HHHTCTTHHHHHHHHHHHHTCGGGGHHHHHHHHHHHT-----TTCTT----HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHcCCCcccCHHHHHHHHHHHH-----cCCHH----HHHHHHHHHHHcCCcccHHHHHHHHHHHH
Confidence 333322222111111 11211 4456666666666 6666666666665
Q ss_pred HHHHHhhCCCCccHHHHHHHHHHHHHHcc-----cHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHH-H--HhhcC
Q 016124 214 LITEKYKGKEHPSFVTHLLNLAASYSRSK-----NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGIT-L--YHLNR 285 (394)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g-----~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~-~--~~~g~ 285 (394)
+. .+..+..++++|.+| ..| ++++|+.+|+++. +....++.+||.+ + ...|+
T Consensus 207 ~~--------g~~~a~~~~~Lg~~y-~~g~~~~~d~~~A~~~~~~aa-----------~g~~~a~~~Lg~~~~~~~~~~d 266 (452)
T 3e4b_A 207 SR--------GTVTAQRVDSVARVL-GDATLGTPDEKTAQALLEKIA-----------PGYPASWVSLAQLLYDFPELGD 266 (452)
T ss_dssp HT--------TCSCHHHHHHHHHHH-TCGGGSSCCHHHHHHHHHHHG-----------GGSTHHHHHHHHHHHHSGGGCC
T ss_pred HC--------CCHHHHHHHHHHHHH-hCCCCCCCCHHHHHHHHHHHc-----------CCCHHHHHHHHHHHHhCCCCCC
Confidence 42 223334445666665 333 4556666665542 2334566677776 3 35667
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhC-----CCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHH
Q 016124 286 DKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLG-----EDDTKLLELLKRVLRIQEREFGSESEEVMLTLKK 360 (394)
Q Consensus 286 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-----~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 360 (394)
+++|+.+|+++.+ .+ ...++.+||.+|. .| +++ +|+.+|+++. +. ...++.+
T Consensus 267 ~~~A~~~~~~Aa~-------~g---~~~A~~~Lg~~y~-~G~g~~~d~~-~A~~~~~~Aa--------~g---~~~A~~~ 323 (452)
T 3e4b_A 267 VEQMMKYLDNGRA-------AD---QPRAELLLGKLYY-EGKWVPADAK-AAEAHFEKAV--------GR---EVAADYY 323 (452)
T ss_dssp HHHHHHHHHHHHH-------TT---CHHHHHHHHHHHH-HCSSSCCCHH-HHHHHHHTTT--------TT---CHHHHHH
T ss_pred HHHHHHHHHHHHH-------CC---CHHHHHHHHHHHH-cCCCCCCCHH-HHHHHHHHHh--------CC---CHHHHHH
Confidence 7777777777654 12 2345667777776 44 555 6666666554 12 2456777
Q ss_pred HHHHHHH----hcCchhhhhhHHHHHH
Q 016124 361 VVSYLDK----LGRKEEKFPLKKRLSN 383 (394)
Q Consensus 361 la~~~~~----~g~~~~A~~~~~~a~~ 383 (394)
||.+|.. ..++++|..+|+++.+
T Consensus 324 Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 324 LGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 7777766 3377777777777765
No 78
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.82 E-value=1.8e-18 Score=136.42 Aligned_cols=171 Identities=16% Similarity=0.144 Sum_probs=142.4
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 179 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 179 (394)
+..+..+|.++...|++++|+..|++++.+. + +....++.++|.++...|++++|+..++++++. .
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----~--~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-------~ 72 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLT-----N--NQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK-------N 72 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-----T--TCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-------T
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcc-----C--CCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh-------C
Confidence 4788999999999999999999999999872 1 022256777999999999999999999999974 2
Q ss_pred CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCc----cHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Q 016124 180 LDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHP----SFVTHLLNLAASYSRSKNFVEAERLLRICL 255 (394)
Q Consensus 180 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~----~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 255 (394)
|+. ..++..+|.++...|++++|+..+++++.+. ++++ ....++..+|.++...|++++|+..|++++
T Consensus 73 p~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al 144 (228)
T 4i17_A 73 YNL---ANAYIGKSAAYRDMKNNQEYIATLTEGIKAV-----PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHAT 144 (228)
T ss_dssp CSH---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cch---HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-----CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHH
Confidence 332 4567899999999999999999999999862 2222 123678999999999999999999999998
Q ss_pred HHHHhhcCCCCCc--chHHHHHHHHHHHhhcCh---------------------------HHHHHHHHHHHHHH
Q 016124 256 DIMTKTVGPDDQS--ISFPMLHLGITLYHLNRD---------------------------KEAEKLVLEALYIR 300 (394)
Q Consensus 256 ~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~---------------------------~~A~~~~~~a~~~~ 300 (394)
+ ..|. ...++.++|.++...|+. ++|+.++++++++.
T Consensus 145 ~--------~~p~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~ 210 (228)
T 4i17_A 145 D--------VTSKKWKTDALYSLGVLFYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLS 210 (228)
T ss_dssp T--------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred h--------cCCCcccHHHHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 7 3567 778999999999999988 78888888887754
No 79
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.82 E-value=5.2e-18 Score=131.17 Aligned_cols=193 Identities=12% Similarity=0.066 Sum_probs=154.1
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhH
Q 016124 27 STLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSL 106 (394)
Q Consensus 27 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 106 (394)
+..|++++|...++... + +.+....++..+|.++...|++++|+.++++++.+.+... +.+....++..+
T Consensus 3 ~~~g~~~~A~~~~~~~~-------~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l 72 (203)
T 3gw4_A 3 FEAHDYALAERQAQALL-------A-HPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSG--DHTAEHRALHQV 72 (203)
T ss_dssp ----CHHHHHHHHHHHH-------T-STTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC--CHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhc-------C-ChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcC--CcHHHHHHHHHH
Confidence 56789999998554331 1 2235678899999999999999999999999999987653 456778899999
Q ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHH
Q 016124 107 GSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIME 186 (394)
Q Consensus 107 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 186 (394)
|.++...|++++|+.++++++.+.+.. +.+......++.++|.++...|++++|+.++++++.+.+.. .++....
T Consensus 73 ~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~ 147 (203)
T 3gw4_A 73 GMVERMAGNWDAARRCFLEERELLASL-PEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA----DDQVAIA 147 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT----TCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHc-CccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc----cchHHHH
Confidence 999999999999999999999998753 22333678889999999999999999999999999988753 4556667
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Q 016124 187 NMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAA 236 (394)
Q Consensus 187 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 236 (394)
.++.++|.++...|++++|..++++++.+.+... +......++..++.
T Consensus 148 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~~ 195 (203)
T 3gw4_A 148 CAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELE--DSEAVNELMTRLNG 195 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC--CHHHHHHHHhcccc
Confidence 7789999999999999999999999999987754 22334444444443
No 80
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.81 E-value=6.3e-18 Score=130.71 Aligned_cols=194 Identities=15% Similarity=0.059 Sum_probs=153.6
Q ss_pred HHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHH
Q 016124 111 IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRI 190 (394)
Q Consensus 111 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 190 (394)
...|++++|...++... .+.+....++..+|.++...|++++|+.++++++.+.+.. .+++....++.
T Consensus 3 ~~~g~~~~A~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~----~~~~~~~~~~~ 70 (203)
T 3gw4_A 3 FEAHDYALAERQAQALL--------AHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS----GDHTAEHRALH 70 (203)
T ss_dssp ----CHHHHHHHHHHHH--------TSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT----CCHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhc--------CChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc----CCcHHHHHHHH
Confidence 46789999998554331 1234567889999999999999999999999999998864 46677788899
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcch
Q 016124 191 DLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSIS 270 (394)
Q Consensus 191 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 270 (394)
++|.++...|++++|+.++++++.+.+... .+......++.++|.++...|++++|+.++++++.+.... .+.....
T Consensus 71 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~ 147 (203)
T 3gw4_A 71 QVGMVERMAGNWDAARRCFLEERELLASLP-EDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQVAIA 147 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-ccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cchHHHH
Confidence 999999999999999999999999987532 1222667889999999999999999999999999986654 2333456
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHH
Q 016124 271 FPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSI 321 (394)
Q Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (394)
.++..+|.++...|++++|..++++++++.... ++......++..++.+
T Consensus 148 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~~~~~ 196 (203)
T 3gw4_A 148 CAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL--EDSEAVNELMTRLNGL 196 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHhcccch
Confidence 678899999999999999999999999998775 3334445555555443
No 81
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.81 E-value=2.1e-17 Score=147.13 Aligned_cols=206 Identities=14% Similarity=0.124 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHH-------CCCHH-------HHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHH
Q 016124 143 MAMCSLAHAKCA-------NGNAE-------EAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGREL 208 (394)
Q Consensus 143 ~~~~~la~~~~~-------~g~~~-------~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 208 (394)
.++..+|..+.. .|+++ +|...++++++. ..|+. ..++..++.++...|++++|...
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~------~~p~~---~~l~~~~~~~~~~~g~~~~A~~~ 343 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST------LLKKN---MLLYFAYADYEESRMKYEKVHSI 343 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT------TCSSC---HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH------hCccc---HHHHHHHHHHHHhcCCHHHHHHH
Confidence 345666666664 68876 777888877751 12232 34568899999999999999999
Q ss_pred HHHHHHHHHHhhCCCCcc-HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHH-HHhhcCh
Q 016124 209 LEECLLITEKYKGKEHPS-FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGIT-LYHLNRD 286 (394)
Q Consensus 209 ~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~ 286 (394)
|++++.+ .|. ...++..++.++...|++++|...|+++++. .|.....+...+.+ +...|++
T Consensus 344 ~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~--------~~~~~~~~~~~a~~~~~~~~~~ 407 (530)
T 2ooe_A 344 YNRLLAI--------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED--------ARTRHHVYVTAALMEYYCSKDK 407 (530)
T ss_dssp HHHHHHS--------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--------TTCCTHHHHHHHHHHHHHTCCH
T ss_pred HHHHhCc--------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------cCCchHHHHHHHHHHHHHcCCh
Confidence 9999874 222 2357889999999999999999999999872 23334444444444 3468999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHH-HHHHHHHHHHHH
Q 016124 287 KEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEE-VMLTLKKVVSYL 365 (394)
Q Consensus 287 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~ 365 (394)
++|...|+++++.. |++ ...+..++.++...|+.+ +|...|++++.. .+.+|. ....+...+...
T Consensus 408 ~~A~~~~e~al~~~-----p~~---~~~~~~~~~~~~~~g~~~-~Ar~~~~~al~~-----~~~~~~~~~~lw~~~~~~e 473 (530)
T 2ooe_A 408 SVAFKIFELGLKKY-----GDI---PEYVLAYIDYLSHLNEDN-NTRVLFERVLTS-----GSLPPEKSGEIWARFLAFE 473 (530)
T ss_dssp HHHHHHHHHHHHHH-----TTC---HHHHHHHHHHHTTTTCHH-HHHHHHHHHHHS-----CCSCGGGCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHhCCCHh-hHHHHHHHHHhc-----cCCCHHHHHHHHHHHHHHH
Confidence 99999999999875 343 457888999999999999 999999999874 223332 345677778888
Q ss_pred HHhcCchhhhhhHHHHHHHHHH
Q 016124 366 DKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 366 ~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
...|+.+.+..++.++++..++
T Consensus 474 ~~~G~~~~~~~~~~r~~~~~p~ 495 (530)
T 2ooe_A 474 SNIGDLASILKVEKRRFTAFRE 495 (530)
T ss_dssp HHSSCHHHHHHHHHHHHHHTHH
T ss_pred HHcCCHHHHHHHHHHHHHHCch
Confidence 8899999999999999998875
No 82
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.81 E-value=2.9e-18 Score=140.45 Aligned_cols=196 Identities=10% Similarity=0.022 Sum_probs=159.4
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHH---HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSIL---LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 89 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 89 (394)
+.....+...+..+...|++++|...+++++... +..+. ....+..+|.++...|++++|+.++++++.+..
T Consensus 72 ~~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~ 146 (293)
T 3u3w_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-----EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL 146 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCC
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc-----cCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhc
Confidence 4444555667888999999999999999988742 22222 244566799999999999999999999998532
Q ss_pred HhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 016124 90 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 169 (394)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 169 (394)
. ..+......++.++|.+|...|++++|+.+|+++++..+.. +.+.+..+.++.++|.+|..+|++++|+.++++++
T Consensus 147 ~--~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al 223 (293)
T 3u3w_A 147 T--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp C--CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred c--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 2 12223346689999999999999999999999999988764 23567788899999999999999999999999999
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHhh
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGR-GQEGRELLEECLLITEKYK 220 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~a~~~~~~~~ 220 (394)
++.+.. .+......++.++|.++..+|+ +++|+.++++++.+.+...
T Consensus 224 ~~~~~~----~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~~ 271 (293)
T 3u3w_A 224 EISCRI----NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILE 271 (293)
T ss_dssp HHHHHT----TBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHc----CcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhC
Confidence 998764 3445567889999999999995 6999999999999987654
No 83
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.81 E-value=7.4e-18 Score=138.06 Aligned_cols=197 Identities=9% Similarity=0.013 Sum_probs=157.8
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
|.....+...+..+...|++++|+..+.++++..+. .+........+..+|.++...|++++|+.++++++......
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~- 148 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY--HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG- 148 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC--CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCS-
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC--ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcC-
Confidence 344455677888999999999999999999875321 11123455567789999999999999999999999764321
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR-VGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.+......++..+|.+|...|++++|+.+|++++.+.+.. ++.+. ...++.++|.+|..+|++++|+.++++++++
T Consensus 149 -~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 149 -IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp -SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 2233456789999999999999999999999999987764 23333 3378999999999999999999999999998
Q ss_pred HHhcccCCCchHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHh
Q 016124 172 IKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEG-RELLEECLLITEKY 219 (394)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~~~~ 219 (394)
.... .+......++.++|.+|...|++++| ..++++++.+.+..
T Consensus 226 ~~~~----~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 226 SCRI----NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHT----TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHhc----CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 7642 34445577889999999999999999 88899999987654
No 84
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.81 E-value=1.4e-17 Score=136.46 Aligned_cols=197 Identities=11% Similarity=-0.065 Sum_probs=158.1
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+.....+...+..+...|++++|+..+.++++.... .+........+..+|.++...|++++|+.++++++.....
T Consensus 72 ~~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 147 (293)
T 2qfc_A 72 IERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY----HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT 147 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC----CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC
T ss_pred hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC----ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc
Confidence 344455667888999999999999999999885432 1223344555678999999999999999999999876432
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCc-chHHHHHHHHHHHhhcChHHHHHHHHHHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS-ISFPMLHLGITLYHLNRDKEAEKLVLEAL 297 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 297 (394)
. .+......++.++|.+|...|++++|+.++++++.+.... ++.+. ...++.++|.+|..+|++++|+.++++++
T Consensus 148 ~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~--~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal 223 (293)
T 2qfc_A 148 G--IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL--HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAI 223 (293)
T ss_dssp S--SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred C--CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc--CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 1333457789999999999999999999999999877654 22222 23788999999999999999999999999
Q ss_pred HHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHH-HHHHHHHHHHHHhh
Q 016124 298 YIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKL-LELLKRVLRIQERE 346 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A-~~~~~~al~~~~~~ 346 (394)
.+.... .+....+.++..+|.++...|+++ +| ..++++++.+.+..
T Consensus 224 ~~~~~~--~~~~~~~~~~~~lg~~y~~~g~~~-~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 224 EISCRI--NSMALIGQLYYQRGECLRKLEYEE-AEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHT--TBCSSHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHT
T ss_pred HHHHhc--CcHHHHHHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHh
Confidence 988542 445556888999999999999999 99 88899999988763
No 85
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.81 E-value=1.6e-17 Score=136.02 Aligned_cols=194 Identities=10% Similarity=0.044 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcch---HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADL---VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
.....+...+..+...|++++|+..+++++... +..+.. ...+..+|.++...|++++|+.++++++.+...
T Consensus 73 ~~~~~l~~~i~~~~~~~~y~~a~~~~~~~l~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~ 147 (293)
T 3u3w_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKE-----EYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLT 147 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCC
T ss_pred hhHHHHHHHHHHHHHHhhHHHHHHHHHHHhccc-----cCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcc
Confidence 344455566788899999999999999988641 122222 345556899999999999999999999985332
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
..+......++.++|.+|...|++++|+.+++++++..+.. ..+.+....++.++|.+|..+|++++|+.+++++
T Consensus 148 --~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 148 --GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL---HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp --CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred --cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc---ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 12333456789999999999999999999999999988763 3467777889999999999999999999999999
Q ss_pred HHHHHHhhCCCCccHHHHHHHHHHHHHHccc-HHHHHHHHHHHHHHHHhh
Q 016124 213 LLITEKYKGKEHPSFVTHLLNLAASYSRSKN-FVEAERLLRICLDIMTKT 261 (394)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~a~~~~~~~ 261 (394)
+++..... +.+..+.++.++|.++...|+ +++|+.++++++.+.+..
T Consensus 223 l~~~~~~~--~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 223 IEISCRIN--SMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp HHHHHHTT--BCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--cHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 99987654 456678899999999999995 699999999999988765
No 86
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.79 E-value=6.7e-17 Score=143.88 Aligned_cols=318 Identities=10% Similarity=0.011 Sum_probs=204.9
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|....++..++.. ...|++++|...|++++.. .|.....+..++..+...|++++|...|++++..
T Consensus 9 ~P~~~~~w~~l~~~-~~~~~~~~a~~~~e~al~~--------~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~---- 75 (530)
T 2ooe_A 9 NPYDLDAWSILIRE-AQNQPIDKARKTYERLVAQ--------FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMK---- 75 (530)
T ss_dssp CTTCHHHHHHHHHH-HHSSCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT----
T ss_pred CCCCHHHHHHHHHH-HHhCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----
Confidence 45556677778874 7789999999999999985 3455677888999999999999999999999875
Q ss_pred cCCCCcchHhhhHhHHH-HHHHhCcHHHHHH----HHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH---------CCC
Q 016124 92 RGTESADLVLPLFSLGS-LFIKEGKAVDAES----VFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA---------NGN 157 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~-~~~~~g~~~~A~~----~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~---------~g~ 157 (394)
.|. ...+...+. .....|++++|.+ .|++++... +. ++.....+...+..... .|+
T Consensus 76 ----~p~-~~lw~~~~~~~~~~~~~~~~a~~~~~~~~~~al~~~----g~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 145 (530)
T 2ooe_A 76 ----VLH-IDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKI----GM-EIMSYQIWVDYINFLKGVEAVGSYAENQR 145 (530)
T ss_dssp ----CCC-HHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHT----TT-STTCHHHHHHHHHHHHHSCCCSSTTHHHH
T ss_pred ----CCC-hHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHC----CC-CcccHHHHHHHHHHHhcCCCcccHHHHhH
Confidence 232 334444443 3334565555544 444433221 10 01001111111111111 122
Q ss_pred HHHHHHHHHHHHHH------------------------------------------------HHhccc----CCC-----
Q 016124 158 AEEAVELYKKALRV------------------------------------------------IKDSNY----MSL----- 180 (394)
Q Consensus 158 ~~~A~~~~~~a~~~------------------------------------------------~~~~~~----~~~----- 180 (394)
+++|..+|++++.. ...... ..+
T Consensus 146 ~~~a~~~y~~al~~P~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~~~~~A~~~~~~~~~~~~~l~~~~~~~~p~~~~~ 225 (530)
T 2ooe_A 146 ITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQNTPQ 225 (530)
T ss_dssp HHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHCCSSSCCCCCC--CC
T ss_pred HHHHHHHHHHHHhchhhhHHHHHHHHHHHHHhhchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhccccccCCCCCChh
Confidence 22222222222110 000000 000
Q ss_pred -----------------------c------------------hHHHHHHHHHHHHHHHH-------cCChH-------HH
Q 016124 181 -----------------------D------------------DSIMENMRIDLAELLHI-------VGRGQ-------EG 205 (394)
Q Consensus 181 -----------------------~------------------~~~~~~~~~~la~~~~~-------~g~~~-------~A 205 (394)
+ .|....++..+|..+.. .|+++ +|
T Consensus 226 ~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A 305 (530)
T 2ooe_A 226 EAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEA 305 (530)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCCSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCccCCcchhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHH
Confidence 0 00113345667777765 68887 67
Q ss_pred HHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcc-hHHHHHHHHHHHhhc
Q 016124 206 RELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSI-SFPMLHLGITLYHLN 284 (394)
Q Consensus 206 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g 284 (394)
+..+++++.. ..|.....+..++.++...|++++|...|++++.+ .|.. ..++..++.++...|
T Consensus 306 ~~~~~~Al~~-------~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~ 370 (530)
T 2ooe_A 306 ANIYERAIST-------LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAI--------EDIDPTLVYIQYMKFARRAE 370 (530)
T ss_dssp HHHHHHHTTT-------TCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------SSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------hCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc--------cccCchHHHHHHHHHHHHhc
Confidence 7777776641 24667788999999999999999999999999983 2332 357889999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHH-HHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Q 016124 285 RDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSI-QTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVS 363 (394)
Q Consensus 285 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 363 (394)
++++|...|++++... +.. ...+...+.+ +...|+.+ +|...|+++++.. +++ ..++..++.
T Consensus 371 ~~~~A~~~~~~Al~~~-----~~~---~~~~~~~a~~~~~~~~~~~-~A~~~~e~al~~~-----p~~---~~~~~~~~~ 433 (530)
T 2ooe_A 371 GIKSGRMIFKKAREDA-----RTR---HHVYVTAALMEYYCSKDKS-VAFKIFELGLKKY-----GDI---PEYVLAYID 433 (530)
T ss_dssp HHHHHHHHHHHHHTCT-----TCC---THHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHH-----TTC---HHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcc-----CCc---hHHHHHHHHHHHHHcCChh-HHHHHHHHHHHHC-----CCC---HHHHHHHHH
Confidence 9999999999998632 222 2233344443 34689998 9999999999864 233 467788999
Q ss_pred HHHHhcCchhhhhhHHHHHHH
Q 016124 364 YLDKLGRKEEKFPLKKRLSNL 384 (394)
Q Consensus 364 ~~~~~g~~~~A~~~~~~a~~~ 384 (394)
++...|+.++|..+|++++..
T Consensus 434 ~~~~~g~~~~Ar~~~~~al~~ 454 (530)
T 2ooe_A 434 YLSHLNEDNNTRVLFERVLTS 454 (530)
T ss_dssp HHTTTTCHHHHHHHHHHHHHS
T ss_pred HHHhCCCHhhHHHHHHHHHhc
Confidence 999999999999999999874
No 87
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.3e-16 Score=138.53 Aligned_cols=242 Identities=10% Similarity=0.035 Sum_probs=196.5
Q ss_pred hhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC---------CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 102 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE---------NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 102 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
+....|..+...|+|++|++.|.++++..+..... .......++..+|.+|...|++++|.+++.+++...
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~ 85 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYM 85 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 34556788889999999999999998764332100 012344578899999999999999999999999988
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
... ++......+...++.++...|++++|+.++++++.+..... ..+....++.++|.++...|++++|..+++
T Consensus 86 ~~~----~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~l~ 159 (434)
T 4b4t_Q 86 MQF----AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREK--RVFLKHSLSIKLATLHYQKKQYKDSLALIN 159 (434)
T ss_dssp HTS----CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSS--CCSSHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHc----cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHccChHHHHHHHH
Confidence 753 34445556678889999999999999999999999887654 556678899999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKL 332 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A 332 (394)
+++...... .+.+....++..++.+|...|++++|..++++++.+..... .++...+..+..+|.++...|++. +|
T Consensus 160 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~y~-~A 235 (434)
T 4b4t_Q 160 DLLREFKKL--DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIY-CPTQTVAELDLMSGILHCEDKDYK-TA 235 (434)
T ss_dssp HHHHHHTTS--SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHTTSSSCHH-HH
T ss_pred HHHHHHHhc--ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCC-CchHHHHHHHHHHHHHHHHHHhHH-HH
Confidence 998876554 45677888999999999999999999999999999876652 222345677888999999999999 99
Q ss_pred HHHHHHHHHHHHhhcCCCCHH
Q 016124 333 LELLKRVLRIQEREFGSESEE 353 (394)
Q Consensus 333 ~~~~~~al~~~~~~~~~~~~~ 353 (394)
..+|.++++.+..........
T Consensus 236 ~~~~~~a~~~~~~~~~~~~~~ 256 (434)
T 4b4t_Q 236 FSYFFESFESYHNLTTHNSYE 256 (434)
T ss_dssp HHHHHHHHHHHHHTTTSSCHH
T ss_pred HHHHHHHHHHhhhhhhhhhHH
Confidence 999999999887765554443
No 88
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.79 E-value=7e-17 Score=133.22 Aligned_cols=223 Identities=14% Similarity=0.065 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH-------hhch-------hHHHHHHHHHHHHHHHhcCCCCcc
Q 016124 33 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS-------IGRA-------KKAVEIYHRVITILELNRGTESAD 98 (394)
Q Consensus 33 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~~-------~~A~~~~~~al~~~~~~~~~~~~~ 98 (394)
++|+..|++++... |....++..+|..+.. .|++ ++|...|++++... .|.
T Consensus 33 ~~a~~~~~~al~~~--------p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~-------~p~ 97 (308)
T 2ond_A 33 KRVMFAYEQCLLVL--------GHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL-------LKK 97 (308)
T ss_dssp HHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT-------TTT
T ss_pred HHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh-------Ccc
Confidence 68889999998863 4445677778877764 4776 89999999998721 456
Q ss_pred hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC
Q 016124 99 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
...++..+|.++...|++++|...|++++.+ .+.++. .++..+|.++...|++++|...|+++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~------ 164 (308)
T 2ond_A 98 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKAREDA------ 164 (308)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTH--HHHHHHHHHHHHHHCHHHHHHHHHHHHTST------
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCcc--HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------
Confidence 6778999999999999999999999999975 233332 278889999999999999999999998742
Q ss_pred CCchHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Q 016124 179 SLDDSIMENMRIDLAELLH-IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 179 ~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
+.. ..++...+.+.. ..|++++|...|+++++.. |....++..++.++...|++++|..+|++++..
T Consensus 165 -p~~---~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 165 -RTR---HHVYVTAALMEYYCSKDKSVAFKIFELGLKKY--------GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp -TCC---THHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred -CCC---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 222 223334444433 3799999999999999863 445678899999999999999999999999872
Q ss_pred HHhhcCCCCC-cchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 258 MTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 258 ~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
. ...| .....+..++..+...|++++|...++++++..
T Consensus 233 ~-----~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~ 271 (308)
T 2ond_A 233 G-----SLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAF 271 (308)
T ss_dssp S-----SSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred c-----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHc
Confidence 1 1133 356678888999999999999999999998865
No 89
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.79 E-value=4.2e-17 Score=134.56 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH-------HCCCH-------HHHHHHHHHHHHHHHhcccCCCch
Q 016124 117 VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKC-------ANGNA-------EEAVELYKKALRVIKDSNYMSLDD 182 (394)
Q Consensus 117 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~-------~~g~~-------~~A~~~~~~a~~~~~~~~~~~~~~ 182 (394)
++|+..|++++.. .|....++..+|..+. ..|++ ++|...|++++... .|+.
T Consensus 33 ~~a~~~~~~al~~--------~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~------~p~~ 98 (308)
T 2ond_A 33 KRVMFAYEQCLLV--------LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL------LKKN 98 (308)
T ss_dssp HHHHHHHHHHHHH--------HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT------TTTC
T ss_pred HHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh------Cccc
Confidence 6888999999987 3444566777777765 45885 89999999998831 1222
Q ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHH-HHHHHHHHHHHcccHHHHHHHHHHHHHHHHhh
Q 016124 183 SIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVT-HLLNLAASYSRSKNFVEAERLLRICLDIMTKT 261 (394)
Q Consensus 183 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~-~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 261 (394)
..++..+|.++...|++++|...|++++.+ +|.... ++.++|.++...|++++|...|++++..
T Consensus 99 ---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~---- 163 (308)
T 2ond_A 99 ---MLLYFAYADYEESRMKYEKVHSIYNRLLAI--------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED---- 163 (308)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS----
T ss_pred ---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----
Confidence 346688999999999999999999999874 233333 7889999999999999999999999873
Q ss_pred cCCCCCcchHHHHHHHHHHH-hhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 262 VGPDDQSISFPMLHLGITLY-HLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 262 ~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
.|.....+...+.+.. ..|++++|...|+++++.. | .....+..++.++...|+++ +|+..|++++
T Consensus 164 ----~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~-----p---~~~~~~~~~~~~~~~~g~~~-~A~~~~~~al 230 (308)
T 2ond_A 164 ----ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKY-----G---DIPEYVLAYIDYLSHLNEDN-NTRVLFERVL 230 (308)
T ss_dssp ----TTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH-----T---TCHHHHHHHHHHHHTTCCHH-HHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----C---CcHHHHHHHHHHHHHCCCHH-HHHHHHHHHH
Confidence 2334555555555533 3799999999999999875 3 34567889999999999999 9999999998
Q ss_pred HHHHhhcCCCCH-HHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Q 016124 341 RIQEREFGSESE-EVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 341 ~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
... .-.| .....+..++..+...|++++|..+++++++..++
T Consensus 231 ~~~-----~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~ 273 (308)
T 2ond_A 231 TSG-----SLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFRE 273 (308)
T ss_dssp HSS-----SSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTT
T ss_pred hcc-----CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc
Confidence 631 1123 24567888899999999999999999999988775
No 90
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.78 E-value=9.9e-17 Score=125.87 Aligned_cols=177 Identities=12% Similarity=0.028 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
+..++.+|..++..|++++|+..|++++.. .++++....++..+|.++...|++++|+..|+++++. .++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~ 73 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPT 73 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcC
Confidence 356789999999999999999999999986 3445556678999999999999999999999999987 345
Q ss_pred CcchHhhhHhHHHHHHH------------------hCcHHHHHHHHHHHHHHHHHhhCCCchHHH--------------H
Q 016124 96 SADLVLPLFSLGSLFIK------------------EGKAVDAESVFSRILKIYTKVYGENDGRVG--------------M 143 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~------------------~g~~~~A~~~~~~al~~~~~~~~~~~~~~~--------------~ 143 (394)
++....+++.+|.++.. .|++++|+..|+++++.. |+++... .
T Consensus 74 ~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----P~~~~a~~a~~~l~~~~~~~~~ 148 (225)
T 2yhc_A 74 HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY-----PNSQYTTDATKRLVFLKDRLAK 148 (225)
T ss_dssp CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC-----TTCTTHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC-----cCChhHHHHHHHHHHHHHHHHH
Confidence 55566788889988876 578999999999998763 2333222 2
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 016124 144 AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLL 214 (394)
Q Consensus 144 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 214 (394)
....+|.+|...|++++|+..|+++++.. |+.+....++..+|.++..+|++++|+..++++..
T Consensus 149 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-------p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~ 212 (225)
T 2yhc_A 149 YEYSVAEYYTERGAWVAVVNRVEGMLRDY-------PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHS-------TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHC-------cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 23578999999999999999999999864 44555667889999999999999999999987654
No 91
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.1e-16 Score=139.13 Aligned_cols=236 Identities=11% Similarity=0.048 Sum_probs=191.3
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhC---------CchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 016124 19 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYG---------KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 89 (394)
Q Consensus 19 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 89 (394)
....|..+...|+|++|+..|.++++..+.... ...+....++..+|.+|...|++++|.+++.+++....
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 345678889999999999999999876432110 01134556789999999999999999999999999876
Q ss_pred HhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 016124 90 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 169 (394)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 169 (394)
... +......+...++.++...|++++|+.++++++.+.... .+.+....++.++|.+|...|++++|..++++++
T Consensus 87 ~~~--~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~ 162 (434)
T 4b4t_Q 87 QFA--KSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE--KRVFLKHSLSIKLATLHYQKKQYKDSLALINDLL 162 (434)
T ss_dssp TSC--HHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS--SCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred Hcc--chHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh--CccHHHHHHHHHHHHHHHHccChHHHHHHHHHHH
Confidence 532 222334567778999999999999999999999998764 3455677889999999999999999999999999
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHH
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAER 249 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 249 (394)
...... .+.+....++..++.+|...|++++|..++++++.+...... .+...+..+..+|.++...|++.+|..
T Consensus 163 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~y~~A~~ 237 (434)
T 4b4t_Q 163 REFKKL----DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYC-PTQTVAELDLMSGILHCEDKDYKTAFS 237 (434)
T ss_dssp HHHTTS----SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHTTSSSCHHHHHH
T ss_pred HHHHhc----ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 887653 455667788999999999999999999999999988766531 123346778889999999999999999
Q ss_pred HHHHHHHHHHhhcC
Q 016124 250 LLRICLDIMTKTVG 263 (394)
Q Consensus 250 ~~~~a~~~~~~~~~ 263 (394)
+|.+++........
T Consensus 238 ~~~~a~~~~~~~~~ 251 (434)
T 4b4t_Q 238 YFFESFESYHNLTT 251 (434)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHhhhhhh
Confidence 99999998776543
No 92
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.77 E-value=2.1e-16 Score=124.06 Aligned_cols=179 Identities=13% Similarity=0.071 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..++.+|..+...|++++|+..|++++.. .++++....++..+|.++...|++++|+..|+++++. .|++
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~~ 74 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPTH 74 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcCC
Confidence 46788899999999999999999999986 3445556788999999999999999999999999987 3456
Q ss_pred hHHHHHHHHHHHHHHH------------------CCCHHHHHHHHHHHHHHHHhcccCCCchHH-----------HHHHH
Q 016124 139 GRVGMAMCSLAHAKCA------------------NGNAEEAVELYKKALRVIKDSNYMSLDDSI-----------MENMR 189 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~------------------~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~-----------~~~~~ 189 (394)
+....++..+|.++.. .|++++|+..|+++++..+.. +.... .....
T Consensus 75 ~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~----~~a~~a~~~l~~~~~~~~~~~ 150 (225)
T 2yhc_A 75 PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNS----QYTTDATKRLVFLKDRLAKYE 150 (225)
T ss_dssp TTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTC----TTHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCC----hhHHHHHHHHHHHHHHHHHHH
Confidence 6666788888888875 679999999999998864332 11110 11222
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
..+|.+|...|++++|+..|+++++.. ++++....++..+|.++...|++++|+..++.+..
T Consensus 151 ~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~ 212 (225)
T 2yhc_A 151 YSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA 212 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHh
Confidence 578999999999999999999998863 34555668899999999999999999999987766
No 93
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.77 E-value=1.4e-17 Score=141.50 Aligned_cols=122 Identities=13% Similarity=0.019 Sum_probs=117.9
Q ss_pred HcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 016124 240 RSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLV 319 (394)
Q Consensus 240 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 319 (394)
..|++++|+.++++++++.++.+|++||.++.++.+||.+|..+|+|++|+.++++++.+.+..+|++||.++.++.+||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHH
Q 016124 320 SIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVV 362 (394)
Q Consensus 320 ~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 362 (394)
.+|..+|+++ +|+.+|++|+++.+..+|++||.+..+..+|.
T Consensus 390 ~~~~~qg~~~-eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 390 RLYMGLENKA-AGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHTTCHH-HHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHhccCHH-HHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 9999999999 99999999999999999999999998877664
No 94
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.77 E-value=1e-17 Score=142.19 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=118.1
Q ss_pred HHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHH
Q 016124 197 HIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHL 276 (394)
Q Consensus 197 ~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l 276 (394)
...|+|++|+.++++++++.++.+|++||.++.++.+||.+|..+|++++|+.++++++++.++.+|++||.++.++.+|
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHH
Q 016124 277 GITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLV 319 (394)
Q Consensus 277 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~ 319 (394)
|.+|..+|++++|+.++++|+++....+|++||.+.....+|.
T Consensus 389 a~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 389 GRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 9999999999999999999999999999999999988776664
No 95
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.77 E-value=3.7e-17 Score=124.31 Aligned_cols=172 Identities=15% Similarity=0.162 Sum_probs=146.0
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
+++.....+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+.++++++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--- 71 (186)
T 3as5_A 3 NDDIRQVYYRDKGISHAKAGRYSQAVMLLEQVYDAD--------AFDVDVALHLGIAYVKTGAVDRGTELLERSLAD--- 71 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCTT--------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred ccchhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------ccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc---
Confidence 345567788999999999999999999999987642 233567889999999999999999999999886
Q ss_pred hcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.|....++..+|.++...|++++|..++++++.. .|....++..+|.++...|++++|+.++++++.
T Consensus 72 -----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 72 -----APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA--------NPINFNVRFRLGVALDNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 3455678899999999999999999999999986 233346788999999999999999999999998
Q ss_pred HHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Q 016124 171 VIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLIT 216 (394)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 216 (394)
... +. ..++..+|.++...|++++|..++++++...
T Consensus 139 ~~~-------~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 139 LRP-------NE---GKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp HCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cCc-------cc---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 632 22 3466889999999999999999999998875
No 96
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.76 E-value=7.3e-17 Score=122.68 Aligned_cols=169 Identities=19% Similarity=0.111 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
.....+..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|..++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~------ 71 (186)
T 3as5_A 6 IRQVYYRDKGISHAKAGRYSQAVMLLEQVYDA--------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLAD------ 71 (186)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT--------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------
Confidence 45677889999999999999999999988754 4455788999999999999999999999999986
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.|....++..+|.++...|++++|..++++++.... +. ..++..+|.++...|++++|+.++++++..
T Consensus 72 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 72 --APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANP-------IN---FNVRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp --CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCc-------Hh---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 233456788999999999999999999999998632 22 345688999999999999999999999875
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 258 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 258 (394)
.|....++..+|.++...|++++|..++++++...
T Consensus 140 --------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 140 --------RPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred --------CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 24456788999999999999999999999998864
No 97
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.76 E-value=2.6e-16 Score=116.86 Aligned_cols=158 Identities=16% Similarity=0.187 Sum_probs=138.9
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
+++..+.++..+|.++...|++++|+.++++++.+.+.. .+......++..+|.++...|++++|+.++++++.+.+.
T Consensus 4 d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 566778899999999999999999999999999998764 344567788999999999999999999999999999876
Q ss_pred hcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.. +.+....++..+|.++...|++++|+.++++++.+.+.. .+.+....++..+|.++...|++++|..+++++++
T Consensus 82 ~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 82 LK--DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp TT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hC--CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 43 445567789999999999999999999999999998764 34566788899999999999999999999999999
Q ss_pred HHHh
Q 016124 171 VIKD 174 (394)
Q Consensus 171 ~~~~ 174 (394)
+.++
T Consensus 158 ~~~~ 161 (164)
T 3ro3_A 158 ISRE 161 (164)
T ss_dssp HHTT
T ss_pred HHHH
Confidence 8764
No 98
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.76 E-value=2e-17 Score=140.90 Aligned_cols=134 Identities=9% Similarity=-0.061 Sum_probs=127.1
Q ss_pred HHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHH
Q 016124 235 AASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEA 314 (394)
Q Consensus 235 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 314 (394)
..-+..+|++++|+..+++++++..+.+|++||.++.++.++|.+|..+|+|++|+.++++++.+.+..+|++||.++..
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhc
Q 016124 315 LDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLG 369 (394)
Q Consensus 315 ~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 369 (394)
+++||.+|..+|+++ +|+.++++|+++.+..+|++||.+..++.+|+.+....+
T Consensus 374 l~nLa~~~~~~g~~~-eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFP-QAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHH-HHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 999999999999999 999999999999999999999999999999998876543
No 99
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.76 E-value=2.9e-16 Score=121.49 Aligned_cols=166 Identities=17% Similarity=0.149 Sum_probs=133.5
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHH----------------HHHHHHHCCCHHHHHH
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCS----------------LAHAKCANGNAEEAVE 163 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----------------la~~~~~~g~~~~A~~ 163 (394)
+..+...|..+...|++++|+..|++++.. +|....++.. +|.++...|++++|+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHH
Confidence 345677899999999999999999999987 4666667777 9999999999999999
Q ss_pred HHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHccc
Q 016124 164 LYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKN 243 (394)
Q Consensus 164 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 243 (394)
.|++++++. |+. ..++.++|.++...|++++|+..|++++++ +|....++.++|.+|...|+
T Consensus 76 ~~~~al~~~-------p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 76 FYKELLQKA-------PNN---VDCLEACAEMQVCRGQEKDALRMYEKILQL--------EADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHHHHHHHC-------TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-------CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHhH
Confidence 999999964 222 456789999999999999999999999986 56677899999999987765
Q ss_pred H--HHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 244 F--VEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 244 ~--~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
. ..+...+++++. + +....+++.+|.++...|++++|+..|++++++.
T Consensus 138 ~~~~~~~~~~~~~~~-------~--~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 187 (208)
T 3urz_A 138 QEKKKLETDYKKLSS-------P--TKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF 187 (208)
T ss_dssp HHHHHHHHHHC---C-------C--CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHhC-------C--CchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 4 344444444322 1 2223466788999999999999999999998754
No 100
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.75 E-value=4.4e-16 Score=115.60 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=137.5
Q ss_pred chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 53 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 53 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
+.+..+.++..+|.++...|++++|+.++++++.+.+... +......++..+|.++...|++++|+.++++++.+.+.
T Consensus 4 d~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 81 (164)
T 3ro3_A 4 SRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--DKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQ 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3456788899999999999999999999999999987743 34556678999999999999999999999999999876
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
. .+.+....++.++|.++...|++++|+.++++++++.+.. .+++....++..+|.++...|++++|+.+++++
T Consensus 82 ~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~----~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 155 (164)
T 3ro3_A 82 L--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL----KDRIGEGRACWSLGNAYTALGNHDQAMHFAEKH 155 (164)
T ss_dssp T--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred h--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc----cchHhHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 4 3455667889999999999999999999999999998764 456677788899999999999999999999999
Q ss_pred HHHHH
Q 016124 213 LLITE 217 (394)
Q Consensus 213 ~~~~~ 217 (394)
+++.+
T Consensus 156 ~~~~~ 160 (164)
T 3ro3_A 156 LEISR 160 (164)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 98764
No 101
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.75 E-value=1.2e-17 Score=121.79 Aligned_cols=147 Identities=12% Similarity=0.104 Sum_probs=120.1
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHH
Q 016124 63 GMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVG 142 (394)
Q Consensus 63 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 142 (394)
.||.++...|++++|+..+++++.. .|.....++.+|.+|...|++++|+.+|++++++ +|...
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~ 65 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDP 65 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH
Confidence 4788999999999999999988754 5667788899999999999999999999999987 45556
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHH-HHHHHHHHHHhhC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGREL-LEECLLITEKYKG 221 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~-~~~a~~~~~~~~~ 221 (394)
.++..+|.+|...|++++|+..|++++++. |+. ..++.++|.++...|++++|... +++++++
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-------p~~---~~~~~~la~~~~~~~~~~~aa~~~~~~al~l------ 129 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVELN-------PTQ---KDLVLKIAELLCKNDVTDGRAKYWVERAAKL------ 129 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTC---HHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhC-------CCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHHh------
Confidence 789999999999999999999999999974 232 34678999999999999887765 5899886
Q ss_pred CCCccHHHHHHHHHHHHHHccc
Q 016124 222 KEHPSFVTHLLNLAASYSRSKN 243 (394)
Q Consensus 222 ~~~~~~~~~~~~la~~~~~~g~ 243 (394)
+|....++...+.++...|+
T Consensus 130 --~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 130 --FPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp --STTCHHHHHHHHHHHHTCCC
T ss_pred --CcCCHHHHHHHHHHHHHhCc
Confidence 35556677788888887775
No 102
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.75 E-value=1.8e-17 Score=141.18 Aligned_cols=135 Identities=10% Similarity=-0.041 Sum_probs=127.5
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 016124 192 LAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISF 271 (394)
Q Consensus 192 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 271 (394)
...-+..+|++++|+..+++++++.++.+|++||.++.++.++|.+|..+|++++|+.++++++.++++.+|++||.++.
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~ 372 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGV 372 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHH
Confidence 34456688999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhC
Q 016124 272 PMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLG 326 (394)
Q Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 326 (394)
.+.+||.+|..+|++++|+.++++|+++.+..+|++||.+..++.+|+.+....+
T Consensus 373 ~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 427 (429)
T 3qwp_A 373 QVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIR 427 (429)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999998876543
No 103
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.75 E-value=1.4e-17 Score=121.48 Aligned_cols=147 Identities=15% Similarity=0.105 Sum_probs=120.6
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchH
Q 016124 21 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLV 100 (394)
Q Consensus 21 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 100 (394)
.||.++...|++++|+..+++++.. .|.....++.+|.+|...|++++|+.+|++++++ +|...
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~--------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~--------~p~~~ 65 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPS--------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINV--------QERDP 65 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCS--------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhccc--------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCH
Confidence 4789999999999999999988753 4667778889999999999999999999999997 56778
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHH-HHHHHHHHHhcccCC
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVEL-YKKALRVIKDSNYMS 179 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~-~~~a~~~~~~~~~~~ 179 (394)
.++..+|.++...|++++|+..|++++++ +|....++.++|.++...|++++|... +++++++.
T Consensus 66 ~a~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~------- 130 (150)
T 4ga2_A 66 KAHRFLGLLYELEENTDKAVECYRRSVEL--------NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLF------- 130 (150)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHS-------
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhC-------
Confidence 89999999999999999999999999987 455567899999999999999887765 58999864
Q ss_pred CchHHHHHHHHHHHHHHHHcCC
Q 016124 180 LDDSIMENMRIDLAELLHIVGR 201 (394)
Q Consensus 180 ~~~~~~~~~~~~la~~~~~~g~ 201 (394)
|+++. ++...+.++...|+
T Consensus 131 P~~~~---~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 131 PGSPA---VYKLKEQLLDCEGE 149 (150)
T ss_dssp TTCHH---HHHHHHHHHHTCCC
T ss_pred cCCHH---HHHHHHHHHHHhCc
Confidence 34443 34567777777775
No 104
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.75 E-value=9.5e-18 Score=152.91 Aligned_cols=200 Identities=15% Similarity=0.040 Sum_probs=158.1
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhH
Q 016124 27 STLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSL 106 (394)
Q Consensus 27 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 106 (394)
...|++++|+..++++++..-......+|....++..+|.++...|++++|+..|+++++. .|....+++.+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHH
Confidence 7789999999999999821111111234556678999999999999999999999999987 45667899999
Q ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHH
Q 016124 107 GSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIME 186 (394)
Q Consensus 107 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 186 (394)
|.++...|++++|+..|++++++ +|....++.++|.++...|++++ +..|++++++. ++. .
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l--------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~-------P~~---~ 534 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT--------FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTN-------DGV---I 534 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH--------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC-------TTC---H
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC-------Cch---H
Confidence 99999999999999999999987 34445678999999999999999 99999999863 222 3
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHH-HHHHHHHHHHHHhh
Q 016124 187 NMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEA-ERLLRICLDIMTKT 261 (394)
Q Consensus 187 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~~~~ 261 (394)
.++.++|.++...|++++|+..|++++++ +|....++.++|.++...++.+++ ...+++++......
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPPT--------SRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCTT--------STTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhccc--------CcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 46799999999999999999999998864 677888999999999887775555 56666666655443
No 105
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.75 E-value=2e-17 Score=150.73 Aligned_cols=200 Identities=14% Similarity=0.113 Sum_probs=159.6
Q ss_pred HHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 016124 69 GSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSL 148 (394)
Q Consensus 69 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 148 (394)
...|++++|+..+++++...-......+|....++..+|.++...|++++|+..|+++++. +|....++.++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAER--------VGWRWRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------HCCCHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhcc--------CcchHHHHHHH
Confidence 6789999999999999821111112245677889999999999999999999999999987 34445689999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHH
Q 016124 149 AHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFV 228 (394)
Q Consensus 149 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 228 (394)
|.++...|++++|+..|++++++.. +. ..++.++|.++...|++++ +..|++++++ +|...
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l~P-------~~---~~~~~~lg~~~~~~g~~~~-~~~~~~al~~--------~P~~~ 534 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDTFP-------GE---LAPKLALAATAELAGNTDE-HKFYQTVWST--------NDGVI 534 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHST-------TC---SHHHHHHHHHHHHHTCCCT-TCHHHHHHHH--------CTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCC-------CC---hHHHHHHHHHHHHcCChHH-HHHHHHHHHh--------CCchH
Confidence 9999999999999999999999743 22 3456899999999999999 9999999986 46667
Q ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHH-HHHHHHHHHHHHHH
Q 016124 229 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEA-EKLVLEALYIREIA 303 (394)
Q Consensus 229 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~~~~ 303 (394)
.++.++|.++...|++++|+..|+++++ ..|....++.++|.++...|+.+++ ...+++++......
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~--------l~P~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~l~~~ 602 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPP--------TSRHFTTARLTSAVTLLSGRSTSEVTEEQIRDAARRVEAL 602 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCT--------TSTTHHHHHHHHHHHTC-------CCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhcc--------cCcccHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHhhC
Confidence 7899999999999999999999999876 3577788999999999887776665 66777777766554
No 106
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.74 E-value=1.5e-16 Score=123.17 Aligned_cols=165 Identities=16% Similarity=0.094 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH----------------HHHHHHHhhchhHHHH
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLG----------------MAKVLGSIGRAKKAVE 79 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~----------------l~~~~~~~g~~~~A~~ 79 (394)
+..+...|..+...|++++|+..|++++.. .|....++.. +|.++...|++++|+.
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 75 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL--------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYL 75 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHH
Confidence 345678899999999999999999999987 3555566777 9999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCH-
Q 016124 80 IYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA- 158 (394)
Q Consensus 80 ~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~- 158 (394)
.|++++++ .|....++..+|.++...|++++|+..|++++++ +|....++.++|.+|...|+.
T Consensus 76 ~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 76 FYKELLQK--------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQL--------EADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHHhHHH
Confidence 99999987 5667889999999999999999999999999987 455567899999999776643
Q ss_pred -HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 159 -EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 159 -~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
..+...+.+++ .+++.. ..+..+|.++...|++++|+..|++++++
T Consensus 140 ~~~~~~~~~~~~---------~~~~~~--~a~~~~g~~~~~~~~~~~A~~~~~~al~l 186 (208)
T 3urz_A 140 KKKLETDYKKLS---------SPTKMQ--YARYRDGLSKLFTTRYEKARNSLQKVILR 186 (208)
T ss_dssp HHHHHHHHC------------CCCHHH--HHHHHHHHHHHHHHTHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHh---------CCCchh--HHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34455554442 123322 34577899999999999999999999875
No 107
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.74 E-value=1e-15 Score=142.48 Aligned_cols=257 Identities=16% Similarity=0.130 Sum_probs=153.2
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHh
Q 016124 22 MGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVL 101 (394)
Q Consensus 22 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 101 (394)
+|.++...|.+++|...|+++-.. .. .+...+...|++++|.++++++ ....
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~---------~~------A~~VLie~i~nldrAiE~Aerv-------------n~p~ 1106 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVN---------TS------AVQVLIEHIGNLDRAYEFAERC-------------NEPA 1106 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCH---------HH------HHHHHHHHHhhHHHHHHHHHhc-------------CCHH
Confidence 477777777777777777775211 01 1122233556666666655533 2256
Q ss_pred hhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCc
Q 016124 102 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD 181 (394)
Q Consensus 102 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 181 (394)
+|..+|.++...|++++|+..|.++ ++ ...+..++.++...|++++|++++..+.+..+.
T Consensus 1107 vWsqLAKAql~~G~~kEAIdsYiKA----------dD---~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e------- 1166 (1630)
T 1xi4_A 1107 VWSQLAKAQLQKGMVKEAIDSYIKA----------DD---PSSYMEVVQAANTSGNWEELVKYLQMARKKARE------- 1166 (1630)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHhc----------CC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-------
Confidence 7778888888888888888888665 12 235666888888888888888888887765321
Q ss_pred hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhh
Q 016124 182 DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 261 (394)
Q Consensus 182 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 261 (394)
+. +...+|.+|.+.+++++ ++.|. . .+.. ..+..+|..+...|++++|..+|.++
T Consensus 1167 ~~----Idt~LafaYAKl~rlee-le~fI---~---------~~n~-ad~~~iGd~le~eg~YeeA~~~Y~kA------- 1221 (1630)
T 1xi4_A 1167 SY----VETELIFALAKTNRLAE-LEEFI---N---------GPNN-AHIQQVGDRCYDEKMYDAAKLLYNNV------- 1221 (1630)
T ss_pred cc----ccHHHHHHHHhhcCHHH-HHHHH---h---------CCCH-HHHHHHHHHHHhcCCHHHHHHHHHhh-------
Confidence 00 11236777777777764 33221 1 1222 24456888888888888888887764
Q ss_pred cCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 016124 262 VGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLR 341 (394)
Q Consensus 262 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~ 341 (394)
..+..++.++...|++++|++.+++|... .+|...+.++...|++. .|..+... +.
T Consensus 1222 ---------~ny~rLA~tLvkLge~q~AIEaarKA~n~-------------~aWkev~~acve~~Ef~-LA~~cgl~-Ii 1277 (1630)
T 1xi4_A 1222 ---------SNFGRLASTLVHLGEYQAAVDGARKANST-------------RTWKEVCFACVDGKEFR-LAQMCGLH-IV 1277 (1630)
T ss_pred ---------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH-------------HHHHHHHHHHhhhhHHH-HHHHHHHh-hh
Confidence 24567778888888888888877776321 23444455555555544 44443332 10
Q ss_pred HHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHH
Q 016124 342 IQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRM 386 (394)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 386 (394)
.+| +.+..++..|...|.+++|+.++++++.+.+
T Consensus 1278 --------v~~---deLeeli~yYe~~G~feEAI~LlE~aL~Ler 1311 (1630)
T 1xi4_A 1278 --------VHA---DELEELINYYQDRGYFEELITMLEAALGLER 1311 (1630)
T ss_pred --------cCH---HHHHHHHHHHHHcCCHHHHHHHHHHHhccCh
Confidence 122 2233555566666666666666666655443
No 108
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.70 E-value=5.6e-16 Score=109.09 Aligned_cols=120 Identities=13% Similarity=0.132 Sum_probs=103.0
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 016124 8 LKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 87 (394)
Q Consensus 8 l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 87 (394)
+..-+|+.+..+..+|..++..|+|++|+..|++++++ .|....++..+|.++...|++++|+..+++++++
T Consensus 5 ~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 5 LAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp --CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 34467999999999999999999999999999999987 2445678999999999999999999999999987
Q ss_pred HHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH
Q 016124 88 LELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA 151 (394)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 151 (394)
+|....++..+|.++..+|++++|+..|++++++ +|....++..++.+
T Consensus 77 --------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l--------~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 77 --------DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQV--------DPSNEEAREGVRNC 124 (126)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHH
T ss_pred --------hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--------CcCCHHHHHHHHHh
Confidence 5667789999999999999999999999999997 34444556666654
No 109
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.67 E-value=3e-15 Score=105.34 Aligned_cols=103 Identities=14% Similarity=0.043 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
+|..+..+..+|..++..|+|++|+..|++++++ .|....++.++|.++..+|++++|+..+++++++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~---- 76 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL---- 76 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh----
Confidence 5888999999999999999999999999999987 5667889999999999999999999999999987
Q ss_pred hCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 134 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
+|....++.++|.++..+|++++|+..|++++++.
T Consensus 77 ----~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~ 111 (126)
T 4gco_A 77 ----DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111 (126)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ----hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
Confidence 45556789999999999999999999999999974
No 110
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=99.66 E-value=1.1e-13 Score=129.31 Aligned_cols=257 Identities=13% Similarity=0.021 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
..+|..+|..+...|++++|+..|.++ .....+..+|.++...|++++|+++|..+....+.
T Consensus 1105 p~vWsqLAKAql~~G~~kEAIdsYiKA-------------dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e----- 1166 (1630)
T 1xi4_A 1105 PAVWSQLAKAQLQKGMVKEAIDSYIKA-------------DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE----- 1166 (1630)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHhc-------------CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-----
Confidence 345667777777777777777777654 12345666777777777777777777776654211
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
+ . +...+|.+|.+.+++++ ++.|. . +++. ..+..+|..+...|++++|..+|.++
T Consensus 1167 -~-~--Idt~LafaYAKl~rlee-le~fI---~--------~~n~----ad~~~iGd~le~eg~YeeA~~~Y~kA----- 1221 (1630)
T 1xi4_A 1167 -S-Y--VETELIFALAKTNRLAE-LEEFI---N--------GPNN----AHIQQVGDRCYDEKMYDAAKLLYNNV----- 1221 (1630)
T ss_pred -c-c--ccHHHHHHHHhhcCHHH-HHHHH---h--------CCCH----HHHHHHHHHHHhcCCHHHHHHHHHhh-----
Confidence 0 0 11125555555555553 22221 0 0111 11234555555555555555555543
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-----------------hhcCCCCCcchHHHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMT-----------------KTVGPDDQSISFPMLHLGITL 280 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~-----------------~~~~~~~~~~~~~~~~la~~~ 280 (394)
..+..++.++.+.|++++|++.++++..... ...+-........+..++..|
T Consensus 1222 -----------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yY 1290 (1630)
T 1xi4_A 1222 -----------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYY 1290 (1630)
T ss_pred -----------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHH
Confidence 1244455555555555555555554422110 000000111233455788889
Q ss_pred HhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhC--CCchHHHHHHHHHHHHHHhhcCCCCHHHHHHH
Q 016124 281 YHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLG--EDDTKLLELLKRVLRIQEREFGSESEEVMLTL 358 (394)
Q Consensus 281 ~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 358 (394)
...|.+++|+.+++.++.+. +.....+..++.++.+-. +.. +++++|...+.+-+-+ ..-.....|
T Consensus 1291 e~~G~feEAI~LlE~aL~Le--------raH~gmftELaiLyaKy~peklm-Ehlk~f~~rini~k~~---r~~e~~~lW 1358 (1630)
T 1xi4_A 1291 QDRGYFEELITMLEAALGLE--------RAHMGMFTELAILYSKFKPQKMR-EHLELFWSRVNIPKVL---RAAEQAHLW 1358 (1630)
T ss_pred HHcCCHHHHHHHHHHHhccC--------hhHhHHHHHHHHHHHhCCHHHHH-HHHHHHHHhcccchHh---HHHHHHHHH
Confidence 99999999999998887643 333445666777776643 222 4444444433221100 011456678
Q ss_pred HHHHHHHHHhcCchhhhhhHHH
Q 016124 359 KKVVSYLDKLGRKEEKFPLKKR 380 (394)
Q Consensus 359 ~~la~~~~~~g~~~~A~~~~~~ 380 (394)
..+..+|.+-|+++.|....-+
T Consensus 1359 ~elv~LY~~~~e~dnA~~tm~~ 1380 (1630)
T 1xi4_A 1359 AELVFLYDKYEEYDNAIITMMN 1380 (1630)
T ss_pred HHHHHHHHhcccHHHHHHHHHh
Confidence 8899999999999999854433
No 111
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.66 E-value=9.7e-17 Score=133.76 Aligned_cols=269 Identities=11% Similarity=-0.006 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCC
Q 016124 17 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 96 (394)
Q Consensus 17 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 96 (394)
.+|..+|..+...|++++|+..|.++- ....+..++..+...|++++|+.+++.+++..
T Consensus 33 ~vWs~La~A~l~~g~~~eAIdsfika~-------------D~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~-------- 91 (449)
T 1b89_A 33 AVWSQLAKAQLQKGMVKEAIDSYIKAD-------------DPSSYMEVVQAANTSGNWEELVKYLQMARKKA-------- 91 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCC-------------CHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhC--------
Confidence 478899999999999999999997641 12256777888888999999999888877631
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
++ +.+...++.+|.+.|++.++.++++. |.. .++..+|..+...|+|++|..+|.++
T Consensus 92 ~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~-------------pn~-~a~~~IGd~~~~~g~yeeA~~~Y~~a-------- 148 (449)
T 1b89_A 92 RE-SYVETELIFALAKTNRLAELEEFING-------------PNN-AHIQQVGDRCYDEKMYDAAKLLYNNV-------- 148 (449)
T ss_dssp ------------------CHHHHTTTTTC-------------C-----------------CTTTHHHHHHHT--------
T ss_pred cc-chhHHHHHHHHHHhCCHHHHHHHHcC-------------CcH-HHHHHHHHHHHHcCCHHHHHHHHHHh--------
Confidence 11 35567788999999999998877742 222 38899999999999999999999975
Q ss_pred cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 177 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
..+..+|.++..+|++++|++.++++. ...++...+.++...|+++.|..+....
T Consensus 149 ----------~n~~~LA~~L~~Lg~yq~AVea~~KA~-------------~~~~Wk~v~~aCv~~~ef~lA~~~~l~L-- 203 (449)
T 1b89_A 149 ----------SNFGRLASTLVHLGEYQAAVDGARKAN-------------STRTWKEVCFACVDGKEFRLAQMCGLHI-- 203 (449)
T ss_dssp ----------TCHHHHHHHHHTTTCHHHHHHHHHHHT-------------CHHHHHHHHHHHHHTTCHHHHHHTTTTT--
T ss_pred ----------hhHHHHHHHHHHhccHHHHHHHHHHcC-------------CchhHHHHHHHHHHcCcHHHHHHHHHHH--
Confidence 134779999999999999999999871 2356778888999999999996554431
Q ss_pred HHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHH
Q 016124 257 IMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELL 336 (394)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~ 336 (394)
..+|+. ...+..+|...|++++|+.++++++.+. +.....+..||.++.+-. ++ +-.
T Consensus 204 -------~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le--------~ah~~~ftel~il~~ky~-p~-k~~--- 260 (449)
T 1b89_A 204 -------VVHADE---LEELINYYQDRGYFEELITMLEAALGLE--------RAHMGMFTELAILYSKFK-PQ-KMR--- 260 (449)
T ss_dssp -------TTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTST--------TCCHHHHHHHHHHHHTTC-HH-HHH---
T ss_pred -------HhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCc--------HHHHHHHHHHHHHHHhcC-HH-HHH---
Confidence 123333 3468889999999999999999997632 333456777888887653 33 222
Q ss_pred HHHHHHHHhhcCCCCH------HHHHHHHHHHHHHHHhcCchhhhhhHHH
Q 016124 337 KRVLRIQEREFGSESE------EVMLTLKKVVSYLDKLGRKEEKFPLKKR 380 (394)
Q Consensus 337 ~~al~~~~~~~~~~~~------~~~~~~~~la~~~~~~g~~~~A~~~~~~ 380 (394)
..++.+.+. -+.| .....|..+..+|...++++.|....-+
T Consensus 261 -ehl~~~~~~--ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A~~tm~~ 307 (449)
T 1b89_A 261 -EHLELFWSR--VNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN 307 (449)
T ss_dssp -HHHHHHSTT--SCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred -HHHHHHHHH--hcCcHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHh
Confidence 222233221 1222 2345678889999999999998775443
No 112
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.66 E-value=7.4e-15 Score=115.79 Aligned_cols=209 Identities=12% Similarity=-0.017 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-------HHHHHHhhchhHHHHHHHHHHHHHH
Q 016124 17 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGM-------AKVLGSIGRAKKAVEIYHRVITILE 89 (394)
Q Consensus 17 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~g~~~~A~~~~~~al~~~~ 89 (394)
..++..|..+ ..+++..|...|.+++.+ +|....++..+ +.++...+++.+++..+++++.+..
T Consensus 8 ~~~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p 78 (282)
T 4f3v_A 8 ASLFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISM 78 (282)
T ss_dssp HHHHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCG
T ss_pred HHHHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCCh
Confidence 3356666666 589999999999999987 46778889988 8999999999999999999887643
Q ss_pred HhcCCCCc-------------chHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC
Q 016124 90 LNRGTESA-------------DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 156 (394)
Q Consensus 90 ~~~~~~~~-------------~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 156 (394)
........ ....+...++.++...|+|++|...|...+. ..|... ..+.+|.++...+
T Consensus 79 ~~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~--------~~p~~~-~~~~~a~l~~~~~ 149 (282)
T 4f3v_A 79 STLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV--------AGSEHL-VAWMKAVVYGAAE 149 (282)
T ss_dssp GGGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC--------TTCHHH-HHHHHHHHHHHTT
T ss_pred hhhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh--------cCCchH-HHHHHHHHHHHcC
Confidence 33211110 1123344578899999999999999987764 245555 8899999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCcc-HHHHHHHHH
Q 016124 157 NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS-FVTHLLNLA 235 (394)
Q Consensus 157 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la 235 (394)
++++|+.+++.+... +++.....+++++|.++..+|++++|+.+|++++. ++..|. ...+.+++|
T Consensus 150 r~~dA~~~l~~a~~~--------~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da~~~~g 215 (282)
T 4f3v_A 150 RWTDVIDQVKSAGKW--------PDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAIAWYLA 215 (282)
T ss_dssp CHHHHHHHHTTGGGC--------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHHHHHHH
T ss_pred CHHHHHHHHHHhhcc--------CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHHHHHHH
Confidence 999999999865431 23333345789999999999999999999999863 222254 677899999
Q ss_pred HHHHHcccHHHHHHHHHHHHHH
Q 016124 236 ASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 236 ~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
.++..+|+.++|...|++++..
T Consensus 216 laL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 216 MARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhc
Confidence 9999999999999999999884
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.66 E-value=3.6e-15 Score=112.14 Aligned_cols=165 Identities=19% Similarity=0.085 Sum_probs=131.8
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 179 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 179 (394)
...+..+|..+...|++++|+..|++++.. +|....++..+|.++...|++++|+..+++++.. .
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~-------~ 70 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLE-------Y 70 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG-------G
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc-------c
Confidence 456778999999999999999999999986 4555678999999999999999999999998763 2
Q ss_pred CchHHHHHHHHHHHHH-HHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q 016124 180 LDDSIMENMRIDLAEL-LHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIM 258 (394)
Q Consensus 180 ~~~~~~~~~~~~la~~-~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 258 (394)
| .+... ..++.+ +...++..+|+..+++++.. +|....++..+|.++...|++++|+..|++++..
T Consensus 71 p-~~~~~---~~~~~~~~~~~~~~~~a~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~- 137 (176)
T 2r5s_A 71 Q-DNSYK---SLIAKLELHQQAAESPELKRLEQELAA--------NPDNFELACELAVQYNQVGRDEEALELLWNILKV- 137 (176)
T ss_dssp C-CHHHH---HHHHHHHHHHHHTSCHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-
T ss_pred C-ChHHH---HHHHHHHHHhhcccchHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh-
Confidence 2 22222 223333 22334455688999998875 4666788999999999999999999999999873
Q ss_pred HhhcCCCCCc--chHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 259 TKTVGPDDQS--ISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 259 ~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
+|. ...++..+|.++...|+.++|+..|++++..
T Consensus 138 -------~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 138 -------NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp -------CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred -------CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 232 3558899999999999999999999998764
No 114
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=1.8e-14 Score=111.61 Aligned_cols=175 Identities=16% Similarity=0.144 Sum_probs=142.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH
Q 016124 75 KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA 154 (394)
Q Consensus 75 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 154 (394)
.+|+.+|+++.+. ..+.+++.+|.+|...+++++|+.+|+++.+. ++ ..++.++|.+|..
T Consensus 3 ~eA~~~~~~aa~~----------g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~-------g~---~~a~~~lg~~y~~ 62 (212)
T 3rjv_A 3 TEPGSQYQQQAEA----------GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ-------GD---GDALALLAQLKIR 62 (212)
T ss_dssp -CTTHHHHHHHHT----------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHTTS
T ss_pred chHHHHHHHHHHC----------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc-------CC---HHHHHHHHHHHHc
Confidence 4577788887753 34678899999999999999999999999763 22 4578899999988
Q ss_pred CC----CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCCc-
Q 016124 155 NG----NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHP- 225 (394)
Q Consensus 155 ~g----~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~- 225 (394)
+ ++++|+.+|+++.+. .+ ..++.++|.+|.. .+++++|+.+|+++.+. .+
T Consensus 63 -~g~~~~~~~A~~~~~~A~~~---------g~---~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--------~~~ 121 (212)
T 3rjv_A 63 -NPQQADYPQARQLAEKAVEA---------GS---KSGEIVLARVLVNRQAGATDVAHAITLLQDAARD--------SES 121 (212)
T ss_dssp -STTSCCHHHHHHHHHHHHHT---------TC---HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS--------TTS
T ss_pred -CCCCCCHHHHHHHHHHHHHC---------CC---HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc--------CCC
Confidence 7 999999999999652 11 3456889999988 88999999999998763 22
Q ss_pred -cHHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhh-c-----ChHHHHHHHH
Q 016124 226 -SFVTHLLNLAASYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL-N-----RDKEAEKLVL 294 (394)
Q Consensus 226 -~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~A~~~~~ 294 (394)
....++.+||.+|.. .+++++|+.+|+++.+. +....++.+||.+|... | ++++|+.+|+
T Consensus 122 ~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---------~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~ 192 (212)
T 3rjv_A 122 DAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---------SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLN 192 (212)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---------SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---------CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 357789999999999 88999999999999872 23345789999999864 3 8999999999
Q ss_pred HHHHH
Q 016124 295 EALYI 299 (394)
Q Consensus 295 ~a~~~ 299 (394)
++.+.
T Consensus 193 ~A~~~ 197 (212)
T 3rjv_A 193 VSCLE 197 (212)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99874
No 115
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.65 E-value=1.6e-14 Score=111.88 Aligned_cols=177 Identities=14% Similarity=0.022 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHH
Q 016124 33 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK 112 (394)
Q Consensus 33 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~ 112 (394)
.+|+.+|+++.+. ..+.+++.+|.++...+++++|+.+|+++.+. ..+.+++.+|.+|..
T Consensus 3 ~eA~~~~~~aa~~----------g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~----------g~~~a~~~lg~~y~~ 62 (212)
T 3rjv_A 3 TEPGSQYQQQAEA----------GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ----------GDGDALALLAQLKIR 62 (212)
T ss_dssp -CTTHHHHHHHHT----------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----------TCHHHHHHHHHHTTS
T ss_pred chHHHHHHHHHHC----------CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHc
Confidence 3577888888763 23467889999999999999999999999763 235788999999998
Q ss_pred hC----cHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 113 EG----KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA----NGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 113 ~g----~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
+ ++++|+.+|+++.+. . ...++.++|.+|.. .+++++|+.+|+++.+. ++. ..
T Consensus 63 -~g~~~~~~~A~~~~~~A~~~-------g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-------~~~-~~ 123 (212)
T 3rjv_A 63 -NPQQADYPQARQLAEKAVEA-------G---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARD-------SES-DA 123 (212)
T ss_dssp -STTSCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSS-------TTS-HH
T ss_pred -CCCCCCHHHHHHHHHHHHHC-------C---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHc-------CCC-cc
Confidence 7 999999999999642 2 34578899999988 89999999999999863 221 12
Q ss_pred HHHHHHHHHHHHHH----cCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHc-c-----cHHHHHHHHHHH
Q 016124 185 MENMRIDLAELLHI----VGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS-K-----NFVEAERLLRIC 254 (394)
Q Consensus 185 ~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-g-----~~~~A~~~~~~a 254 (394)
...++.++|.+|.. .+++++|+.+|+++.+. +....++.+||.+|... | ++++|+.+|+++
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~---------~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A 194 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL---------SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVS 194 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT---------SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc---------CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 34567899999999 88999999999999763 12234788999999865 3 899999999999
Q ss_pred HHH
Q 016124 255 LDI 257 (394)
Q Consensus 255 ~~~ 257 (394)
.+.
T Consensus 195 ~~~ 197 (212)
T 3rjv_A 195 CLE 197 (212)
T ss_dssp HHH
T ss_pred HHc
Confidence 883
No 116
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.65 E-value=8.9e-15 Score=119.05 Aligned_cols=169 Identities=15% Similarity=0.031 Sum_probs=144.0
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
|.....+..+|..+...|++++|+..|++++.. +|....++..+|.++...|++++|+..+++++..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~----- 180 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQL--------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ----- 180 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG-----
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHh--------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh-----
Confidence 456678889999999999999999999999987 3455578999999999999999999999998763
Q ss_pred cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 177 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
.|+.. ......+..+...++.++|+..+++++.. +|....++.++|.++...|++++|+..|++++.
T Consensus 181 --~p~~~---~~~~~~~~~l~~~~~~~~a~~~l~~al~~--------~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 181 --DQDTR---YQGLVAQIELLXQAADTPEIQQLQQQVAE--------NPEDAALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp --GCSHH---HHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred --hcchH---HHHHHHHHHHHhhcccCccHHHHHHHHhc--------CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 23322 23456677788889999999999999885 567778999999999999999999999999998
Q ss_pred HHHhhcCCCCCcc--hHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 257 IMTKTVGPDDQSI--SFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 257 ~~~~~~~~~~~~~--~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
. +|.. ..++..++.++...|+.++|...|++++..
T Consensus 248 ~--------~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 248 X--------DLTAADGQTRXTFQEILAALGTGDALASXYRRQLYA 284 (287)
T ss_dssp H--------CTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred c--------ccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 4 3444 678899999999999999999999998864
No 117
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.63 E-value=1.7e-15 Score=113.97 Aligned_cols=167 Identities=18% Similarity=0.079 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
...+..+|..+...|++++|+..|++++... |....++..+|.++...|++++|+..+++++..
T Consensus 6 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~--------P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~-------- 69 (176)
T 2r5s_A 6 DEQLLKQVSELLQQGEHAQALNVIQTLSDEL--------QSRGDVKLAKADCLLETKQFELAQELLATIPLE-------- 69 (176)
T ss_dssp CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHH--------HTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGG--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhc--------
Confidence 3456789999999999999999999999863 555678999999999999999999999998764
Q ss_pred CcchHhhhHhHHHHH-HHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 96 SADLVLPLFSLGSLF-IKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~-~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.| .......++.+. ...++..+|+..+++++.. .|....++..+|.++...|++++|+..++++++..
T Consensus 70 ~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~--------~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~-- 138 (176)
T 2r5s_A 70 YQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAA--------NPDNFELACELAVQYNQVGRDEEALELLWNILKVN-- 138 (176)
T ss_dssp GC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--
T ss_pred cC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhC--
Confidence 22 223333334332 2323344578999999876 45556788999999999999999999999998753
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 175 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 175 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
|++.. ..++.+++.++...|+.++|+..|++++..
T Consensus 139 -----p~~~~-~~a~~~l~~~~~~~g~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 139 -----LGAQD-GEVKKTFMDILSALGQGNAIASKYRRQLYS 173 (176)
T ss_dssp -----TTTTT-THHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred -----cccCh-HHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 22111 234578999999999999999999998764
No 118
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.63 E-value=2.2e-14 Score=103.81 Aligned_cols=109 Identities=10% Similarity=0.193 Sum_probs=98.2
Q ss_pred ccccCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 016124 5 VDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRV 84 (394)
Q Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 84 (394)
++....-+|....+++.+|..++..|++++|+..|++++.+ +|....++..+|.++...|++++|+..|+++
T Consensus 25 l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 25 LKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp TGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 44555678999999999999999999999999999999987 2445668999999999999999999999999
Q ss_pred HHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 85 ITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 85 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
+.+ .|..+.+++++|.++..+|++++|+..|++++.+
T Consensus 97 l~l--------~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l 133 (151)
T 3gyz_A 97 FAL--------GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQH 133 (151)
T ss_dssp HHH--------SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred Hhh--------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 998 4666788999999999999999999999999987
No 119
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.63 E-value=3.2e-15 Score=108.21 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
+|....+++.+|.++...|++++|+..|++++.+ +|....++.++|.++...|++++|+..|++++.+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l---- 99 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY--------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFAL---- 99 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhh----
Confidence 5778889999999999999999999999999987 5677889999999999999999999999999997
Q ss_pred hCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 134 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.|....++.++|.+|...|++++|+..|++++++.
T Consensus 100 ----~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 100 ----GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHS 134 (151)
T ss_dssp ----SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 34444678999999999999999999999999974
No 120
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.62 E-value=4.6e-13 Score=108.28 Aligned_cols=225 Identities=9% Similarity=-0.074 Sum_probs=182.1
Q ss_pred HHhhch-hHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhC--cHHHHHHHHHHHHHHHHHhhCCCchHHHHHH
Q 016124 69 GSIGRA-KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEG--KAVDAESVFSRILKIYTKVYGENDGRVGMAM 145 (394)
Q Consensus 69 ~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 145 (394)
...|.+ ++|+..+.+++.+ +|....+++..+.++...| ++++++..+.+++.. +|....++
T Consensus 43 ~~~~e~s~~aL~~t~~~L~~--------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~aW 106 (306)
T 3dra_A 43 MKAEEYSERALHITELGINE--------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQIW 106 (306)
T ss_dssp HHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHHH
T ss_pred HHcCCCCHHHHHHHHHHHHH--------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHHH
Confidence 344444 6899999999988 6778889999999999999 999999999999986 45555677
Q ss_pred HHHHHHH----HHC---CCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChH--HHHHHHHHHHHHH
Q 016124 146 CSLAHAK----CAN---GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQ--EGRELLEECLLIT 216 (394)
Q Consensus 146 ~~la~~~----~~~---g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~~~~a~~~~ 216 (394)
+..+.++ ... +++++++.++.++++...+. ..++...+.+....|+++ +++++++++++.
T Consensus 107 ~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkn----------y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~- 175 (306)
T 3dra_A 107 NYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKN----------HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT- 175 (306)
T ss_dssp HHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCC----------HHHHHHHHHHHHHhcccChHHHHHHHHHHHHh-
Confidence 7777777 666 89999999999999864332 456788899999999998 999999999875
Q ss_pred HHhhCCCCccHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHH
Q 016124 217 EKYKGKEHPSFVTHLLNLAASYSRSKN------FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAE 290 (394)
Q Consensus 217 ~~~~~~~~~~~~~~~~~la~~~~~~g~------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 290 (394)
+|....++...+.+....++ ++++++++.+++.+ +|....++..++.++...|+..+++
T Consensus 176 -------d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~--------~p~n~SaW~y~~~ll~~~~~~~~~~ 240 (306)
T 3dra_A 176 -------DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK--------CPQNPSTWNYLLGIHERFDRSITQL 240 (306)
T ss_dssp -------CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCCGGGG
T ss_pred -------CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh--------CCCCccHHHHHHHHHHhcCCChHHH
Confidence 56777889999999998887 89999999999884 6788889999999999999865544
Q ss_pred -HHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 016124 291 -KLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLR 341 (394)
Q Consensus 291 -~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~ 341 (394)
.++.+++... ...+....++..++.++.+.|+.+ +|+++|+.+.+
T Consensus 241 ~~~~~~~~~~~-----~~~~~s~~al~~la~~~~~~~~~~-~A~~~~~~l~~ 286 (306)
T 3dra_A 241 EEFSLQFVDLE-----KDQVTSSFALETLAKIYTQQKKYN-ESRTVYDLLKS 286 (306)
T ss_dssp HHHHHTTEEGG-----GTEESCHHHHHHHHHHHHHTTCHH-HHHHHHHHHHH
T ss_pred HHHHHHHHhcc-----CCCCCCHHHHHHHHHHHHccCCHH-HHHHHHHHHHh
Confidence 4555554421 113445567899999999999998 99999998764
No 121
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.62 E-value=3.3e-14 Score=100.25 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=96.0
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
++.+.++.++|..++..|+|++|+.+|++++++ +|....++.++|.+|..+|++++|+..+++++++.+..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~- 75 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET- 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-
Confidence 345678889999999999999999999999987 45556789999999999999999999999999998763
Q ss_pred cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 177 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.......+.++.++|.++...|++++|+.+|++++..
T Consensus 76 --~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 76 --RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp --TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4556777889999999999999999999999999875
No 122
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.62 E-value=2.9e-14 Score=116.03 Aligned_cols=171 Identities=18% Similarity=0.145 Sum_probs=143.1
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
|.....+..+|..+...|++++|+..|+++++.. |+. ..++..+|.++...|++++|+..+++++..
T Consensus 114 p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-------P~~---~~a~~~la~~~~~~g~~~~A~~~l~~~~~~--- 180 (287)
T 3qou_A 114 PREEELXAQQAMQLMQESNYTDALPLLXDAWQLS-------NQN---GEIGLLLAETLIALNRSEDAEAVLXTIPLQ--- 180 (287)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-------TSC---HHHHHHHHHHHHHTTCHHHHHHHHTTSCGG---
T ss_pred CCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhC-------Ccc---hhHHHHHHHHHHHCCCHHHHHHHHHhCchh---
Confidence 3445677899999999999999999999999864 333 346689999999999999999999988653
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
.|.........+..+...++.++|+..+++++.. +|....++.++|.++...|++++|+..|+++++
T Consensus 181 -----~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~--------~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~ 247 (287)
T 3qou_A 181 -----DQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAE--------NPEDAALATQLALQLHQVGRNEEALELLFGHLR 247 (287)
T ss_dssp -----GCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -----hcchHHHHHHHHHHHHhhcccCccHHHHHHHHhc--------CCccHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 3445556667777788899999999999999884 577788999999999999999999999999998
Q ss_pred HHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHH
Q 016124 299 IREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRI 342 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~ 342 (394)
.. |++ ....++..++.++...|+.+ +|...|++++..
T Consensus 248 ~~-----p~~-~~~~a~~~l~~~~~~~g~~~-~a~~~~r~al~~ 284 (287)
T 3qou_A 248 XD-----LTA-ADGQTRXTFQEILAALGTGD-ALASXYRRQLYA 284 (287)
T ss_dssp HC-----TTG-GGGHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred cc-----ccc-ccchHHHHHHHHHHHcCCCC-cHHHHHHHHHHH
Confidence 54 222 22567899999999999999 999999998864
No 123
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.62 E-value=4.9e-13 Score=108.11 Aligned_cols=226 Identities=10% Similarity=-0.012 Sum_probs=181.6
Q ss_pred HHhhhch-HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh--chhHHHHHHHHHHHHHHHhcCCCCcchHhh
Q 016124 26 YSTLENY-EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG--RAKKAVEIYHRVITILELNRGTESADLVLP 102 (394)
Q Consensus 26 ~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 102 (394)
....|.+ ++|+..+.+++.+ .|....+++..+.++...| ++++++..+.+++.. +|....+
T Consensus 42 ~~~~~e~s~~aL~~t~~~L~~--------nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~--------nPk~y~a 105 (306)
T 3dra_A 42 LMKAEEYSERALHITELGINE--------LASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALD--------NEKNYQI 105 (306)
T ss_dssp HHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH--------CTTCCHH
T ss_pred HHHcCCCCHHHHHHHHHHHHH--------CcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH--------CcccHHH
Confidence 3444554 6899999999987 3555678889999999999 999999999999986 5667788
Q ss_pred hHhHHHHH----HHh---CcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHH--HHHHHHHHHHHHHH
Q 016124 103 LFSLGSLF----IKE---GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAE--EAVELYKKALRVIK 173 (394)
Q Consensus 103 ~~~l~~~~----~~~---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--~A~~~~~~a~~~~~ 173 (394)
++..+.++ ... +++++++.++.++++. +|....++...+.+....|.++ +++.++.++++...
T Consensus 106 W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~--------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 106 WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS--------DPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 88888888 666 7899999999999986 5666678999999999999998 99999999998643
Q ss_pred hcccCCCchHHHHHHHHHHHHHHHHcCC------hHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHH
Q 016124 174 DSNYMSLDDSIMENMRIDLAELLHIVGR------GQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEA 247 (394)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~la~~~~~~g~------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 247 (394)
.. ..++...+.+....|+ ++++++++.+++.. +|....+++.++.++...|+..++
T Consensus 178 ~N----------~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~--------~p~n~SaW~y~~~ll~~~~~~~~~ 239 (306)
T 3dra_A 178 KN----------NSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVK--------CPQNPSTWNYLLGIHERFDRSITQ 239 (306)
T ss_dssp TC----------HHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCCGGG
T ss_pred CC----------HHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHh--------CCCCccHHHHHHHHHHhcCCChHH
Confidence 21 4566788888888887 88999999998875 577778899999999999986553
Q ss_pred H-HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 248 E-RLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 248 ~-~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
. .++.+++.+. ...+....++..++.++...|+.++|+++++.+.+
T Consensus 240 ~~~~~~~~~~~~-----~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~~ 286 (306)
T 3dra_A 240 LEEFSLQFVDLE-----KDQVTSSFALETLAKIYTQQKKYNESRTVYDLLKS 286 (306)
T ss_dssp GHHHHHTTEEGG-----GTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHHh
Confidence 3 4444444321 12356677899999999999999999999998764
No 124
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=99.61 E-value=1.5e-15 Score=126.64 Aligned_cols=261 Identities=12% Similarity=0.043 Sum_probs=111.7
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhH
Q 016124 25 MYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLF 104 (394)
Q Consensus 25 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~ 104 (394)
.....|+.++|..++++. ++| .++..+|..+...|++++|++.|.++- ....+.
T Consensus 12 ll~~~~~ld~A~~fae~~----------~~~---~vWs~La~A~l~~g~~~eAIdsfika~-------------D~~~y~ 65 (449)
T 1b89_A 12 LIEHIGNLDRAYEFAERC----------NEP---AVWSQLAKAQLQKGMVKEAIDSYIKAD-------------DPSSYM 65 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHccCHHHHHHHHHhC----------CCh---HHHHHHHHHHHHcCCHHHHHHHHHcCC-------------CHHHHH
Confidence 345678888898888876 122 378899999999999999999997641 123667
Q ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 105 SLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 105 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
.++..+...|++++|+.+++.+++.. +. ..+...++.+|.+.|+++++..+++. |+.
T Consensus 66 ~V~~~ae~~g~~EeAi~yl~~ark~~--------~~-~~i~~~Li~~Y~Klg~l~e~e~f~~~------------pn~-- 122 (449)
T 1b89_A 66 EVVQAANTSGNWEELVKYLQMARKKA--------RE-SYVETELIFALAKTNRLAELEEFING------------PNN-- 122 (449)
T ss_dssp ----------------------------------------------------CHHHHTTTTTC------------C----
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhC--------cc-chhHHHHHHHHHHhCCHHHHHHHHcC------------CcH--
Confidence 78888999999999999999887641 11 34567789999999999998877642 221
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCC
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP 264 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 264 (394)
..+..+|..+...|++++|..+|.++ ..+..+|.++...|++++|++.++++.
T Consensus 123 --~a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--------- 175 (449)
T 1b89_A 123 --AHIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKAN--------- 175 (449)
T ss_dssp ----------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHT---------
T ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcC---------
Confidence 26789999999999999999999865 246789999999999999999999871
Q ss_pred CCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 016124 265 DDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQE 344 (394)
Q Consensus 265 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~ 344 (394)
...+|..+..++...|+++.|..+.... ..+|+. +..+..+|.+.|.++ +|+.++++++.+
T Consensus 176 ----~~~~Wk~v~~aCv~~~ef~lA~~~~l~L---------~~~ad~---l~~lv~~Yek~G~~e-Eai~lLe~aL~l-- 236 (449)
T 1b89_A 176 ----STRTWKEVCFACVDGKEFRLAQMCGLHI---------VVHADE---LEELINYYQDRGYFE-ELITMLEAALGL-- 236 (449)
T ss_dssp ----CHHHHHHHHHHHHHTTCHHHHHHTTTTT---------TTCHHH---HHHHHHHHHHTTCHH-HHHHHHHHHTTS--
T ss_pred ----CchhHHHHHHHHHHcCcHHHHHHHHHHH---------HhCHhh---HHHHHHHHHHCCCHH-HHHHHHHHHhCC--
Confidence 2467788889999999999996655431 134543 446888999999999 999999999853
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHH--hcCchhhhhhHHHHHHHHH
Q 016124 345 REFGSESEEVMLTLKKVVSYLDK--LGRKEEKFPLKKRLSNLRM 386 (394)
Q Consensus 345 ~~~~~~~~~~~~~~~~la~~~~~--~g~~~~A~~~~~~a~~~~~ 386 (394)
.+.| ...+..||.+|.+ .++..+.++.|...+.+.+
T Consensus 237 ---e~ah---~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 237 ---ERAH---MGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp ---TTCC---HHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred ---cHHH---HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 1223 4556666666654 5677777777777666655
No 125
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.61 E-value=4.2e-14 Score=99.70 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhh
Q 016124 55 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 134 (394)
Q Consensus 55 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 134 (394)
++.+.++..+|..++..|+|++|+.+|++++++ +|..+.++.++|.+|..+|++++|+..+++++++.+..
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~- 75 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET- 75 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc-
Confidence 466778899999999999999999999999987 56678899999999999999999999999999987664
Q ss_pred CCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 135 GENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 135 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
....+..+.++.++|.++...|++++|+.+|++++..
T Consensus 76 ~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 76 RADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 2345567789999999999999999999999999985
No 126
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.61 E-value=1.4e-14 Score=130.12 Aligned_cols=153 Identities=12% Similarity=0.092 Sum_probs=118.3
Q ss_pred hhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHH
Q 016124 71 IGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAH 150 (394)
Q Consensus 71 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 150 (394)
.|++++|+..++++++. .|....++..+|.++...|++++|+..++++++. .|....++.++|.
T Consensus 2 ~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH--------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGR 65 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Confidence 47899999999999876 4566788999999999999999999999999975 3445678999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHH
Q 016124 151 AKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTH 230 (394)
Q Consensus 151 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 230 (394)
++...|++++|+.++++++++.. +. ..++.++|.++...|++++|+..++++++. .|....+
T Consensus 66 ~~~~~g~~~~A~~~~~~al~~~p-------~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~ 127 (568)
T 2vsy_A 66 VRWTQQRHAEAAVLLQQASDAAP-------EH---PGIALWLGHALEDAGQAEAAAAAYTRAHQL--------LPEEPYI 127 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCC-------CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHH
Confidence 99999999999999999998642 22 456789999999999999999999999986 3555678
Q ss_pred HHHHHHHHHHc---ccHHHHHHHHHHHHHH
Q 016124 231 LLNLAASYSRS---KNFVEAERLLRICLDI 257 (394)
Q Consensus 231 ~~~la~~~~~~---g~~~~A~~~~~~a~~~ 257 (394)
+.++|.++... |++++|...++++++.
T Consensus 128 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 128 TAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 89999999999 9999999999999885
No 127
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.60 E-value=1.7e-14 Score=113.72 Aligned_cols=208 Identities=12% Similarity=0.022 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhH-------HHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 60 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSL-------GSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 60 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l-------~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
.++..|.-+ ..+++..|...|.+++.+ +|..+.++..+ +.++...++..+++..+++++.+...
T Consensus 9 ~~~~~~~~~-~~~d~~~A~~~F~~a~~~--------dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~ 79 (282)
T 4f3v_A 9 SLFESAVSM-LPMSEARSLDLFTEITNY--------DESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMS 79 (282)
T ss_dssp HHHHHHHHH-TTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGG
T ss_pred HHHHHHhcc-cCCCHHHHHHHHHHHHHh--------ChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChh
Confidence 344555555 589999999999999997 68888999999 89999999999999999998876443
Q ss_pred hhCCCch-------------HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHc
Q 016124 133 VYGENDG-------------RVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV 199 (394)
Q Consensus 133 ~~~~~~~-------------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 199 (394)
.++.... ........++.++...|+|++|.+.|..++. .+++. . ..+.+|.++...
T Consensus 80 ~l~a~~~~~g~y~~~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~-------~~p~~---~-~~~~~a~l~~~~ 148 (282)
T 4f3v_A 80 TLNARIAIGGLYGDITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV-------AGSEH---L-VAWMKAVVYGAA 148 (282)
T ss_dssp GGCCEEECCTTTCCCEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC-------TTCHH---H-HHHHHHHHHHHT
T ss_pred hhhhhhccCCcccccccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh-------cCCch---H-HHHHHHHHHHHc
Confidence 3221111 1234556688999999999999999987654 12222 2 568899999999
Q ss_pred CChHHHHHHHHHHHHHHHHhhCCCCcc-HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCc-chHHHHHHH
Q 016124 200 GRGQEGRELLEECLLITEKYKGKEHPS-FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQS-ISFPMLHLG 277 (394)
Q Consensus 200 g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la 277 (394)
+++++|+..++++... .++. ...+++.+|.++...|++++|+.+|+++.. ++..|. ...+.+.+|
T Consensus 149 ~r~~dA~~~l~~a~~~-------~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~~~~da~~~~g 215 (282)
T 4f3v_A 149 ERWTDVIDQVKSAGKW-------PDKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEACARAIAWYLA 215 (282)
T ss_dssp TCHHHHHHHHTTGGGC-------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhcc-------CCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCccccHHHHHHHH
Confidence 9999999999865432 1232 245889999999999999999999999874 222254 667889999
Q ss_pred HHHHhhcChHHHHHHHHHHHHHH
Q 016124 278 ITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 278 ~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
.++..+|+.++|...|++++...
T Consensus 216 laL~~lGr~deA~~~l~~a~a~~ 238 (282)
T 4f3v_A 216 MARRSQGNESAAVALLEWLQTTH 238 (282)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHcCCHHHHHHHHHHHHhcC
Confidence 99999999999999999998854
No 128
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.59 E-value=2.4e-14 Score=128.56 Aligned_cols=153 Identities=12% Similarity=0.084 Sum_probs=117.7
Q ss_pred hhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHH
Q 016124 29 LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGS 108 (394)
Q Consensus 29 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 108 (394)
.|++++|+..++++++.. |....++..+|.++...|++++|+..++++++. .|....++..+|.
T Consensus 2 ~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR--------PQDFVAWLMLADAELGMGDTTAGEMAVQRGLAL--------HPGHPEAVARLGR 65 (568)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT--------STTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHH
Confidence 478999999999998763 344568999999999999999999999999986 4566789999999
Q ss_pred HHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHH
Q 016124 109 LFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENM 188 (394)
Q Consensus 109 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 188 (394)
++...|++++|+.+++++++. .|....++.++|.++...|++++|+..++++++... +. ..+
T Consensus 66 ~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-------~~---~~~ 127 (568)
T 2vsy_A 66 VRWTQQRHAEAAVLLQQASDA--------APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP-------EE---PYI 127 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHH
T ss_pred HHHHCCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------CC---HHH
Confidence 999999999999999999987 344466889999999999999999999999998642 22 345
Q ss_pred HHHHHHHHHHc---CChHHHHHHHHHHHHH
Q 016124 189 RIDLAELLHIV---GRGQEGRELLEECLLI 215 (394)
Q Consensus 189 ~~~la~~~~~~---g~~~~A~~~~~~a~~~ 215 (394)
+.++|.++... |++++|...++++++.
T Consensus 128 ~~~l~~~~~~~~~~g~~~~A~~~~~~al~~ 157 (568)
T 2vsy_A 128 TAQLLNWRRRLCDWRALDVLSAQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHHHhc
Confidence 68899999999 9999999999999876
No 129
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.58 E-value=1.8e-14 Score=119.97 Aligned_cols=163 Identities=17% Similarity=0.159 Sum_probs=131.1
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC-------CCcchH
Q 016124 28 TLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT-------ESADLV 100 (394)
Q Consensus 28 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~ 100 (394)
..+++++|+..+++++.. .|..+.++..+|.++...|++++|+..|++++.+....... ..+...
T Consensus 125 ~L~~~~~A~~~~~~a~~~--------~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~ 196 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE--------KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRL 196 (336)
T ss_dssp EEEEEECCCCGGGCCHHH--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHH--------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHH
Confidence 567788888888877764 36778889999999999999999999999999983221000 001226
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCC
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSL 180 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 180 (394)
.++.++|.++...|++++|+.+|++++.+ .|....++.++|.++...|++++|+..|++++++. |
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-------P 261 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALEL--------DSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLY-------P 261 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------S
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC-------C
Confidence 78999999999999999999999999987 34556789999999999999999999999999974 2
Q ss_pred chHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHH
Q 016124 181 DDSIMENMRIDLAELLHIVGRGQEG-RELLEECLLIT 216 (394)
Q Consensus 181 ~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~ 216 (394)
+. ..++.+++.++...|++++| ...|.+++...
T Consensus 262 ~~---~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 262 NN---KAAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp SC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32 34568899999999999998 45677666544
No 130
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.58 E-value=2e-14 Score=119.59 Aligned_cols=163 Identities=17% Similarity=0.101 Sum_probs=132.1
Q ss_pred HhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC-------CchHHH
Q 016124 70 SIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE-------NDGRVG 142 (394)
Q Consensus 70 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~ 142 (394)
..+++++|+..+++++.. .|..+.++..+|.++...|++++|+..|++++.+....... ..+...
T Consensus 125 ~L~~~~~A~~~~~~a~~~--------~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~ 196 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE--------KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRL 196 (336)
T ss_dssp EEEEEECCCCGGGCCHHH--------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHH--------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHH
Confidence 457788888888877765 35667889999999999999999999999999884321000 012236
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 222 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 222 (394)
.++.++|.++...|++++|+..+++++++.. +. ..++.++|.++...|++++|+..|++++.+
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l------- 259 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALELDS-------NN---EKGLSRRGEAHLAVNDFELARADFQKVLQL------- 259 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------Cc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-------
Confidence 7899999999999999999999999999742 22 456789999999999999999999999986
Q ss_pred CCccHHHHHHHHHHHHHHcccHHHH-HHHHHHHHHHH
Q 016124 223 EHPSFVTHLLNLAASYSRSKNFVEA-ERLLRICLDIM 258 (394)
Q Consensus 223 ~~~~~~~~~~~la~~~~~~g~~~~A-~~~~~~a~~~~ 258 (394)
.|....++..++.++...|++++| ...|++++...
T Consensus 260 -~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 295 (336)
T 1p5q_A 260 -YPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERL 295 (336)
T ss_dssp -CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456667899999999999999999 45677766543
No 131
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.55 E-value=3e-13 Score=96.61 Aligned_cols=131 Identities=21% Similarity=0.410 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCC
Q 016124 17 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 96 (394)
Q Consensus 17 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 96 (394)
.+++.+|.++...|++++|+.++++++... |....++..+|.++...|++++|+..+++++.. .
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~ 65 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------D 65 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcC--------CcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH--------C
Confidence 457889999999999999999999998752 223456788999999999999999999999876 3
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
|....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|...+++++..
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 444667889999999999999999999999876 2233457788999999999999999999999875
No 132
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.54 E-value=7.6e-13 Score=94.50 Aligned_cols=131 Identities=21% Similarity=0.348 Sum_probs=110.6
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCc
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
.++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|..++++++.. .
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~ 65 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------D 65 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------C
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc--------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHH--------C
Confidence 35778899999999999999999999876 3445678889999999999999999999999876 2
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
|....++..+|.++...|++++|+..+++++.... .. ..++..+|.++...|++++|..++++++..
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDP-------RS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC-------CC---hHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 33345678899999999999999999999998632 22 345678999999999999999999998865
No 133
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.53 E-value=4.8e-13 Score=96.97 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=96.6
Q ss_pred ccccCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 016124 5 VDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRV 84 (394)
Q Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 84 (394)
++.....+|....+++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|+++
T Consensus 10 ~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 81 (148)
T 2vgx_A 10 IAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYG 81 (148)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 34445567888999999999999999999999999999986 2344567889999999999999999999999
Q ss_pred HHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHH
Q 016124 85 ITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 130 (394)
Q Consensus 85 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 130 (394)
+.+ .|....+++.+|.++...|++++|+..|++++.+.
T Consensus 82 l~l--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 82 AVM--------DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELI 119 (148)
T ss_dssp HHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred Hhc--------CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 987 45566789999999999999999999999999884
No 134
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.52 E-value=1.8e-13 Score=99.25 Aligned_cols=104 Identities=16% Similarity=-0.003 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
+|....+++.+|.++...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL--------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc--------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4677888999999999999999999999999987 5666788999999999999999999999999987
Q ss_pred hCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 134 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
.|....++.++|.++...|++++|+..|++++++..
T Consensus 85 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 85 ----DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp ----STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred ----CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 334446789999999999999999999999999864
No 135
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.52 E-value=6.2e-13 Score=98.80 Aligned_cols=140 Identities=12% Similarity=0.050 Sum_probs=116.8
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
...+..+..+|..+...|++++|+..|++++... |....++..+|.++...|++++|+..+++++..
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----- 76 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELN--------PSNAIYYGNRSLAYLRTECYGYALGDATRAIEL----- 76 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----
Confidence 3467788999999999999999999999999862 333567889999999999999999999999987
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.|....++..+|.++...|++++|+.++++++.. .+.++. ......++..+...|++++|+..+.++..+.
T Consensus 77 ---~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 77 ---DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKD-AKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCHH-HHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 3556778999999999999999999999999987 223332 2233556666888999999999999988877
Q ss_pred Hh
Q 016124 173 KD 174 (394)
Q Consensus 173 ~~ 174 (394)
..
T Consensus 148 ~~ 149 (166)
T 1a17_A 148 DS 149 (166)
T ss_dssp HH
T ss_pred cc
Confidence 55
No 136
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.52 E-value=6e-13 Score=93.87 Aligned_cols=123 Identities=12% Similarity=0.033 Sum_probs=101.6
Q ss_pred hHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhc
Q 016124 13 PLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNR 92 (394)
Q Consensus 13 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 92 (394)
|..+..+..+|..++..|++++|+..|++++.+. |....++..+|.++...|++++|+..+++++.+
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----- 67 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRA--------PEDARGYSNRAAALAKLMSFPEAIADCNKAIEK----- 67 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----
Confidence 4567789999999999999999999999999872 334578999999999999999999999999987
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKC 153 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 153 (394)
.|....++..+|.++...|++++|+..|++++.+..... +.|....+...++.+..
T Consensus 68 ---~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 68 ---DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQ 123 (126)
T ss_dssp ---CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHH
Confidence 456678999999999999999999999999999864432 22444455555555543
No 137
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.52 E-value=1.3e-12 Score=97.00 Aligned_cols=140 Identities=12% Similarity=0.042 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhC
Q 016124 56 LLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYG 135 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 135 (394)
..+..+..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~------ 76 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIEL------ 76 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Confidence 55677899999999999999999999999986 4455788999999999999999999999999987
Q ss_pred CCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 136 ENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 136 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
.|....++..+|.++...|++++|+.++++++.+.. ..+. ......++..+...|++++|+..+.++..+
T Consensus 77 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p-------~~~~-~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 77 --DKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKP-------HDKD-AKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------TCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-------CCHH-HHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 234456789999999999999999999999998642 2222 223355666688899999999999998887
Q ss_pred HHHh
Q 016124 216 TEKY 219 (394)
Q Consensus 216 ~~~~ 219 (394)
....
T Consensus 147 ~~~~ 150 (166)
T 1a17_A 147 VDSL 150 (166)
T ss_dssp HHHC
T ss_pred hccc
Confidence 6543
No 138
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.4e-12 Score=90.72 Aligned_cols=122 Identities=12% Similarity=-0.058 Sum_probs=100.1
Q ss_pred chHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhccc
Q 016124 98 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 177 (394)
Q Consensus 98 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 177 (394)
..+..+..+|..+...|++++|+..|++++.. .|....++.++|.++...|++++|+..+++++++..
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---- 69 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKR--------APEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDP---- 69 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT----
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC----
Confidence 34567889999999999999999999999987 344457899999999999999999999999999742
Q ss_pred CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHH
Q 016124 178 MSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYS 239 (394)
Q Consensus 178 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 239 (394)
+. ..++.++|.++...|++++|+..+++++.+..... ..|....+...++.+..
T Consensus 70 ---~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~--~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 70 ---NF---VRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYKASQ 123 (126)
T ss_dssp ---TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHHHHH
T ss_pred ---Cc---HHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccC--CchhHHHHHHHHHHHHH
Confidence 22 45678999999999999999999999999865543 34555666666665543
No 139
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.50 E-value=3.3e-13 Score=104.90 Aligned_cols=139 Identities=12% Similarity=0.071 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
.+..++.+|..+...|++++|+..|++++. + ...++..+|.++...|++++|+..+++++..
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~-------~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------- 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD-------P----HSRICFNIGCMYTILKNMTEAEKAFTRSINR------- 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS-------C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC-------C----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Confidence 445578999999999999999999998841 1 2457899999999999999999999999987
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhh--------CCCchHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY--------GENDGRVGMAMCSLAHAKCANGNAEEAVELYK 166 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 166 (394)
.|....++..+|.++...|++++|+..|++++....... ....+....++.++|.++...|++++|+..++
T Consensus 67 -~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 145 (213)
T 1hh8_A 67 -DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLA 145 (213)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHH
Confidence 455678899999999999999999999999998643210 00234566889999999999999999999999
Q ss_pred HHHHHH
Q 016124 167 KALRVI 172 (394)
Q Consensus 167 ~a~~~~ 172 (394)
+++++.
T Consensus 146 ~al~~~ 151 (213)
T 1hh8_A 146 LATSMK 151 (213)
T ss_dssp HHHTTC
T ss_pred HHHHcC
Confidence 999853
No 140
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.49 E-value=1.8e-12 Score=92.40 Aligned_cols=118 Identities=17% Similarity=0.055 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC----CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 57 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT----ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 57 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
.+..+...|..++..|+|++|+..|++++++....... ..|....++.++|.++..+|++++|+..+.++++++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 45667889999999999999999999999985431110 01123449999999999999999999999999998666
Q ss_pred hhCCCchHHHHHH----HHHHHHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 133 VYGENDGRVGMAM----CSLAHAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 133 ~~~~~~~~~~~~~----~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
.. +-+|....++ +++|.++..+|++++|+..|++++++....
T Consensus 90 ~~-e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 90 RG-ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HC-CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred cc-cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 53 4456777788 999999999999999999999999997654
No 141
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.49 E-value=6e-13 Score=103.39 Aligned_cols=139 Identities=14% Similarity=0.115 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
...++.+|..+...|++++|+..|++++. + ...++..+|.++...|++++|+.+|++++..
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~----------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 66 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD----------P-HSRICFNIGCMYTILKNMTEAEKAFTRSINR-------- 66 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS----------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC----------C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------
Confidence 34577889999999999999999998731 1 3578999999999999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhccc------CCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY------MSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 211 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~------~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 211 (394)
.|....++.++|.++...|++++|+..++++++....... .....+....++.++|.++...|++++|+..+++
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 146 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLAL 146 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3444578999999999999999999999999987543200 0002223356779999999999999999999999
Q ss_pred HHHH
Q 016124 212 CLLI 215 (394)
Q Consensus 212 a~~~ 215 (394)
++.+
T Consensus 147 al~~ 150 (213)
T 1hh8_A 147 ATSM 150 (213)
T ss_dssp HHTT
T ss_pred HHHc
Confidence 9875
No 142
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.49 E-value=2.2e-12 Score=91.94 Aligned_cols=117 Identities=10% Similarity=0.106 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhC----CchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG----KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
.+..+...|..++..|+|++|+..|++++++.+.... ...|....++.++|.++..+|++++|+..++++++++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4566789999999999999999999999998644100 112345669999999999999999999999999998655
Q ss_pred hcCCCCcchHhhh----HhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 91 NRGTESADLVLPL----FSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 91 ~~~~~~~~~~~~~----~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
.. +-.|+...+| +++|.++..+|++++|+..|++++++...
T Consensus 90 ~~-e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 90 RG-ELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HC-CTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cc-cCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 43 3467788888 99999999999999999999999998654
No 143
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.48 E-value=1.9e-13 Score=104.83 Aligned_cols=163 Identities=12% Similarity=0.026 Sum_probs=116.8
Q ss_pred HhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC----
Q 016124 104 FSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS---- 179 (394)
Q Consensus 104 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---- 179 (394)
...+......|+++++.+.+...... .+..+..+..+|..+...|++++|+..|.+++.+........
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~ 79 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYTDEE--------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQIL 79 (198)
T ss_dssp --------------CCCSGGGCCHHH--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHH
T ss_pred cchhhhhhhhhhccccCchhhCCHHH--------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhH
Confidence 34566667778888887777655432 345667889999999999999999999999998754320000
Q ss_pred --CchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Q 016124 180 --LDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 180 --~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
........++.++|.++...|++++|+.++++++.+ .|....++..+|.++...|++++|+..|++++.+
T Consensus 80 ~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 80 LDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL 151 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 001112467889999999999999999999999986 3556778999999999999999999999999985
Q ss_pred HHhhcCCCCCcchHHHHHHHHHHHhhcChHHHH
Q 016124 258 MTKTVGPDDQSISFPMLHLGITLYHLNRDKEAE 290 (394)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 290 (394)
.|....++..++.++...++..++.
T Consensus 152 --------~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 152 --------NPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp --------STTCHHHHHHHHHHHHHHHHHHC--
T ss_pred --------CCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778889999999888887776
No 144
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.47 E-value=1.6e-12 Score=96.11 Aligned_cols=110 Identities=16% Similarity=0.122 Sum_probs=96.3
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhC---Cc-------hHHHHHHHHHHHHHHHHhhchhHHHHHH
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG---KT-------SILLVTSLLGMAKVLGSIGRAKKAVEIY 81 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 81 (394)
....+..+...|..++..|+|++|+..|.+++.+...... +. .|....++.++|.++...|++++|+..+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 3456788999999999999999999999999998655321 11 4566788999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 82 HRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 82 ~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
++++.+ +|....+++.+|.++...|++++|+..|++++.+
T Consensus 87 ~~al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 87 SEVLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 999997 5677889999999999999999999999999988
No 145
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.47 E-value=2.1e-12 Score=93.08 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=96.4
Q ss_pred ccccCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 016124 5 VDSLKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRV 84 (394)
Q Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 84 (394)
++.....+|.....++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|+++
T Consensus 7 l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 7 LAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp --CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44555677888899999999999999999999999999986 2344567889999999999999999999999
Q ss_pred HHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Q 016124 85 ITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYT 131 (394)
Q Consensus 85 l~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 131 (394)
+.+ .|....++..+|.++...|++++|+..|++++.+..
T Consensus 79 l~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 117 (142)
T 2xcb_A 79 ALM--------DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAA 117 (142)
T ss_dssp HHH--------CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred Hhc--------CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 987 455667889999999999999999999999998854
No 146
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.47 E-value=1.7e-13 Score=111.03 Aligned_cols=194 Identities=12% Similarity=-0.003 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
+..+..+|..+...|++++|+..|++++.. .|....++.++|.++...|++++|+..+++++.+
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~-------- 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL-------- 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 456788999999999999999999999987 4566788999999999999999999999999875
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITE 217 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 217 (394)
+|....++..+|.++...|++++|+..+++++++...... .-..... .... ..++..+... .
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~--~~~~~~~-----~~~~------~~~~~~~~~~-----~ 129 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRL--NFGDDIP-----SALR------IAKKKRWNSI-----E 129 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--CCCSHHH-----HHHH------HHHHHHHHHH-----H
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchh--hHHHHHH-----HHHH------HHHHHHHHHH-----H
Confidence 4555678999999999999999999999999998764310 0001111 0101 1111111111 1
Q ss_pred HhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhh-cChHHHHHHHHHH
Q 016124 218 KYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHL-NRDKEAEKLVLEA 296 (394)
Q Consensus 218 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a 296 (394)
....+..+.. ...++.+. .|++++|++.++++++. .|........++.++... +.+++|...|.++
T Consensus 130 ~~~~~~~~~i---~~~l~~l~--~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~a 196 (281)
T 2c2l_A 130 ERRIHQESEL---HSYLTRLI--AAERERELEECQRNHEG--------HEDDGHIRAQQACIEAKHDKYMADMDELFSQV 196 (281)
T ss_dssp HTCCCCCCHH---HHHHHHHH--HHHHHHHHTTTSGGGTT--------TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhhhHHH---HHHHHHHH--HHHHHHHHHHHHhhhcc--------ccchhhhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111223333 33445443 68999999988887762 344445555666666665 7788888888877
Q ss_pred HH
Q 016124 297 LY 298 (394)
Q Consensus 297 ~~ 298 (394)
.+
T Consensus 197 ~~ 198 (281)
T 2c2l_A 197 DE 198 (281)
T ss_dssp SC
T ss_pred hc
Confidence 55
No 147
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.46 E-value=2.7e-13 Score=104.03 Aligned_cols=159 Identities=17% Similarity=0.096 Sum_probs=112.6
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcc-
Q 016124 20 LHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD- 98 (394)
Q Consensus 20 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~- 98 (394)
...+......|+++++...+...... .+..+..+..+|..+...|++++|+..|++++.+..... +...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~--~~~~~ 77 (198)
T 2fbn_A 8 HHHSSGRENLYFQGAKKSIYDYTDEE--------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE--EWDDQ 77 (198)
T ss_dssp --------------CCCSGGGCCHHH--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT--TCCCH
T ss_pred cchhhhhhhhhhccccCchhhCCHHH--------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc--ccchh
Confidence 34566666778888887777654432 345677889999999999999999999999998632210 0000
Q ss_pred ---------hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q 016124 99 ---------LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKAL 169 (394)
Q Consensus 99 ---------~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 169 (394)
...++.++|.++...|++++|+.++++++.+ .|....++..+|.++...|++++|+..|++++
T Consensus 78 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 149 (198)
T 2fbn_A 78 ILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAA 149 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 1378899999999999999999999999987 34445788999999999999999999999999
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHH
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGR 206 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 206 (394)
++.. +. ..++..++.++...++..++.
T Consensus 150 ~~~p-------~~---~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 150 SLNP-------NN---LDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHST-------TC---HHHHHHHHHHHHHHHHHHC--
T ss_pred HHCC-------Cc---HHHHHHHHHHHHHHHHHHHHH
Confidence 8742 22 344577888888888777766
No 148
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.46 E-value=6.6e-12 Score=90.46 Aligned_cols=105 Identities=14% Similarity=0.018 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
+|.....++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 81 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML--------DHYDARYFLGLGACRQSLGLYEQALQSYSYGALM---- 81 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 4677788999999999999999999999999986 5666788999999999999999999999999987
Q ss_pred hCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 134 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|....++.++|.++...|++++|+..|++++++...
T Consensus 82 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 118 (142)
T 2xcb_A 82 ----DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAA 118 (142)
T ss_dssp ----CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred ----CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 2334457889999999999999999999999998653
No 149
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.46 E-value=1.1e-12 Score=93.50 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=106.6
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 016124 8 LKDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITI 87 (394)
Q Consensus 8 l~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 87 (394)
.....|.....+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..+++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 8 HSHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN--------PKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp TCCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC--------TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 345667788899999999999999999999999998752 333567899999999999999999999999986
Q ss_pred HHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC
Q 016124 88 LELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN 157 (394)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 157 (394)
.|....++..+|.++...|++++|+.++++++.. .|....++..++.++...|+
T Consensus 80 --------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 80 --------EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDL--------DSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp --------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CGGGTHHHHHHHHHHHHHTC
T ss_pred --------CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHh--------CCCchHHHHHHHHHHHHhcC
Confidence 3456778999999999999999999999999986 34445677888888877664
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.46 E-value=1.8e-12 Score=91.97 Aligned_cols=126 Identities=18% Similarity=0.188 Sum_probs=106.1
Q ss_pred CCCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Q 016124 9 KDDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITIL 88 (394)
Q Consensus 9 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 88 (394)
...+|.....+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..+++++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~- 75 (131)
T 2vyi_A 5 SEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELN--------PANAVYFCNRAAAYSKLGNYAGAVQDCERAICI- 75 (131)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-
T ss_pred hhcchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc-
Confidence 34577888899999999999999999999999999862 233567889999999999999999999999986
Q ss_pred HHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCH
Q 016124 89 ELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA 158 (394)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 158 (394)
.|....++..+|.++...|++++|..++++++.. .|....++..++.++...|++
T Consensus 76 -------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 76 -------DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALEL--------DPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp -------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHHTTC
T ss_pred -------CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc--------CccchHHHHHHHHHHHHHhcC
Confidence 3445678999999999999999999999999987 233345678899998888764
No 151
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.45 E-value=1.4e-13 Score=111.55 Aligned_cols=195 Identities=12% Similarity=0.028 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
.+..+..+|..++..|++++|+..|++++... |....++..+|.++...|++++|+..+++++.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~------- 67 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN--------PLVAVYYTNRALCYLKMQQPEQALADCRRALEL------- 67 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS-------
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-------
Confidence 45678899999999999999999999999862 334567899999999999999999999999875
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|....+++.+|.++...|++++|+..|++++.+.......-.. ....... ..++........ .
T Consensus 68 -~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~----~ 131 (281)
T 2c2l_A 68 -DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGD-DIPSALR----------IAKKKRWNSIEE----R 131 (281)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCCS-HHHHHHH----------HHHHHHHHHHHH----T
T ss_pred -CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhhHHH-HHHHHHH----------HHHHHHHHHHHH----H
Confidence 56677899999999999999999999999999986542100001 1111111 111111111111 1
Q ss_pred cccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHc-ccHHHHHHHHHH
Q 016124 175 SNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS-KNFVEAERLLRI 253 (394)
Q Consensus 175 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~ 253 (394)
..+..+.+. ..++.++ .|++++|++.++++++. .|........++.++... +.+++|...|.+
T Consensus 132 ---~~~~~~~i~---~~l~~l~--~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~~a~~~f~~ 195 (281)
T 2c2l_A 132 ---RIHQESELH---SYLTRLI--AAERERELEECQRNHEG--------HEDDGHIRAQQACIEAKHDKYMADMDELFSQ 195 (281)
T ss_dssp ---CCCCCCHHH---HHHHHHH--HHHHHHHHTTTSGGGTT--------TSCHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHhhhHHHH---HHHHHHH--HHHHHHHHHHHHhhhcc--------ccchhhhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 122223322 2234433 68899999988887763 345555556666666665 778889998887
Q ss_pred HHH
Q 016124 254 CLD 256 (394)
Q Consensus 254 a~~ 256 (394)
+.+
T Consensus 196 a~~ 198 (281)
T 2c2l_A 196 VDE 198 (281)
T ss_dssp SSC
T ss_pred hhc
Confidence 765
No 152
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.45 E-value=6.7e-12 Score=88.96 Aligned_cols=124 Identities=19% Similarity=0.158 Sum_probs=104.8
Q ss_pred chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 53 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 53 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
..+.....+..+|..+...|++++|+..+++++.. .|....++..+|.++...|++++|+.++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--- 75 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL--------NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICI--- 75 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc---
Confidence 35677888999999999999999999999999986 3445778999999999999999999999999986
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCCh
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRG 202 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 202 (394)
.|....++..+|.++...|++++|+.++++++.... +. ..++..++.++...|++
T Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p-------~~---~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 76 -----DPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDP-------DN---ETYKSNLKIAELKLREA 130 (131)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------TC---HHHHHHHHHHHHHHTTC
T ss_pred -----CccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-------cc---hHHHHHHHHHHHHHhcC
Confidence 233356789999999999999999999999998632 22 23557889999888875
No 153
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.45 E-value=4.1e-10 Score=91.56 Aligned_cols=224 Identities=7% Similarity=-0.042 Sum_probs=163.9
Q ss_pred HHHhhchh-HHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCc----------HHHHHHHHHHHHHHHHHhhCC
Q 016124 68 LGSIGRAK-KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK----------AVDAESVFSRILKIYTKVYGE 136 (394)
Q Consensus 68 ~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~ 136 (394)
....|.++ +|+..+.+++.+ +|....+++..+.++...+. +++++.++..++..
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~--------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~------- 103 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV------- 103 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh-------
Confidence 34567776 789999988876 67778888888888887766 56777777777764
Q ss_pred CchHHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHH
Q 016124 137 NDGRVGMAMCSLAHAKCANGN--AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR-GQEGRELLEECL 213 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~a~ 213 (394)
+|....++...+.++...|+ +++++.++.++++...+. ..++...+.+....|. ++++++++.+++
T Consensus 104 -~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN----------y~AW~~R~~vl~~l~~~~~eel~~~~~~I 172 (331)
T 3dss_A 104 -NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN----------FHCWDYRRFVAAQAAVAPAEELAFTDSLI 172 (331)
T ss_dssp -CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC----------HHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 56666789999999999984 899999999999864332 4566888888899998 589999999998
Q ss_pred HHHHHhhCCCCccHHHHHHHHHHHHHHc--------------ccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHH
Q 016124 214 LITEKYKGKEHPSFVTHLLNLAASYSRS--------------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGIT 279 (394)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~ 279 (394)
.. +|....++...+.++... +.++++++++.+++.+ +|....++..+..+
T Consensus 173 ~~--------~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~--------~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 173 TR--------NFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPNDQSAWFYHRWL 236 (331)
T ss_dssp HH--------CSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH--------STTCHHHHHHHHHH
T ss_pred HH--------CCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHH
Confidence 75 677778899999888877 6688999999999884 56677777766555
Q ss_pred HHhh-----------cChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHH---HhCCCchHHHHHHHHHHHH
Q 016124 280 LYHL-----------NRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQT---RLGEDDTKLLELLKRVLRI 342 (394)
Q Consensus 280 ~~~~-----------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~g~~~~~A~~~~~~al~~ 342 (394)
+... +.++++++.+.+++++. |+. ..++..++.+.. ..|..+ +...++.+..++
T Consensus 237 l~~~~~~~~~~~~~~~~l~~el~~~~elle~~-----pd~---~w~l~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~ 304 (331)
T 3dss_A 237 LGAGSGRCELSVEKSTVLQSELESCKELQELE-----PEN---KWCLLTIILLMRALDPLLYEK-ETLQYFSTLKAV 304 (331)
T ss_dssp HHSSSCGGGCCHHHHHHHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHCTTTTHH-HHHHHHHHHHHH
T ss_pred HHhccCccccchHHHHHHHHHHHHHHHHHhhC-----ccc---chHHHHHHHHHHhhcccccHH-HHHHHHHHHHHh
Confidence 5554 34677777777777654 333 233333333222 234444 677777777654
No 154
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.44 E-value=1.4e-13 Score=119.95 Aligned_cols=180 Identities=11% Similarity=-0.009 Sum_probs=129.7
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
+..+..+..+|.++...|++++|+.+|++++++ +|....++.++|.++..+|++++|+..+++++++.
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~---- 70 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIEL--------NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD---- 70 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSC----
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC----
Confidence 345667888999999999999999999999987 45556789999999999999999999999999853
Q ss_pred cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHH--HHHcccHHHHHHHHH--
Q 016124 177 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAAS--YSRSKNFVEAERLLR-- 252 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~-- 252 (394)
++. ..++.++|.+|..+|++++|+..+++++++ +|....++..++.+ +...|++++|++.++
T Consensus 71 ---p~~---~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~ 136 (477)
T 1wao_1 71 ---KKY---IKGYYRRAASNMALGKFRAALRDYETVVKV--------KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHK 136 (477)
T ss_dssp ---TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------STTCTTHHHHHHHHHHHHHHHHHCCC------C
T ss_pred ---CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 222 456789999999999999999999999986 23333456677777 888999999999998
Q ss_pred ---------HHHHHHHhhcCCCCCc---chHHHHHHHHHHHhhcChH--HHHHHHHHHHHHHHH
Q 016124 253 ---------ICLDIMTKTVGPDDQS---ISFPMLHLGITLYHLNRDK--EAEKLVLEALYIREI 302 (394)
Q Consensus 253 ---------~a~~~~~~~~~~~~~~---~~~~~~~la~~~~~~g~~~--~A~~~~~~a~~~~~~ 302 (394)
+++.+.....++..+. ....+..+...+...+... .+..++.++.++...
T Consensus 137 ~~~~~~~~~~al~~~~~~~~~~~~~~~itl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~ 200 (477)
T 1wao_1 137 RSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSK 200 (477)
T ss_dssp CSTTTCCTTSSCCCCTTCCSCCCGGGSCCHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHT
T ss_pred chhHhhhhhhhccccccccccccccccccHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHcc
Confidence 5554433333333332 2333344445555555544 445577777777654
No 155
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.43 E-value=2e-12 Score=95.80 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=94.4
Q ss_pred CCchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 016124 10 DDEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILE 89 (394)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 89 (394)
..++..+..+..+|.+++..|++++|+.+|++++.+. |....++..+|.++...|++++|+..|++++.+
T Consensus 5 ~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-- 74 (164)
T 3sz7_A 5 MAPTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA--------PANPIYLSNRAAAYSASGQHEKAAEDAELATVV-- 74 (164)
T ss_dssp SSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred chhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--
Confidence 3566788899999999999999999999999999873 334678999999999999999999999999987
Q ss_pred HhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHH
Q 016124 90 LNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 130 (394)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 130 (394)
.|....++..+|.++...|++++|+.+|++++.+.
T Consensus 75 ------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 75 ------DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp ------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 45668899999999999999999999999999874
No 156
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.43 E-value=3e-12 Score=91.15 Aligned_cols=123 Identities=12% Similarity=-0.015 Sum_probs=102.7
Q ss_pred chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 53 TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 53 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
..+.....+..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--- 79 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKR--------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL--- 79 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH---
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh---
Confidence 34567788999999999999999999999999875 4455788999999999999999999999999986
Q ss_pred hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC
Q 016124 133 VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR 201 (394)
Q Consensus 133 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 201 (394)
.|....++..+|.++...|++++|+.++++++..... . ..++..++.++...|+
T Consensus 80 -----~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~-------~---~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 80 -----EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSS-------C---KEAADGYQRCMMAQYN 133 (133)
T ss_dssp -----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGG-------G---THHHHHHHHHHHHHTC
T ss_pred -----CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCC-------c---hHHHHHHHHHHHHhcC
Confidence 2334567899999999999999999999999986432 2 2345778888877664
No 157
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.42 E-value=6.3e-10 Score=90.51 Aligned_cols=223 Identities=9% Similarity=0.009 Sum_probs=162.5
Q ss_pred HhhhchH-HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhc----------hhHHHHHHHHHHHHHHHhcCCC
Q 016124 27 STLENYE-KSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGR----------AKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 27 ~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~ 95 (394)
...|.++ +|+..+.+++.+ .|....+++..+.+....|. +++++.++..++..
T Consensus 40 ~~~~e~s~eaL~~t~~~L~~--------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~-------- 103 (331)
T 3dss_A 40 RQAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV-------- 103 (331)
T ss_dssp HHTTCCSHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHh--------
Confidence 4566665 688888888775 35556677777888877766 57777777777765
Q ss_pred CcchHhhhHhHHHHHHHhCc--HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHH
Q 016124 96 SADLVLPLFSLGSLFIKEGK--AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN-AEEAVELYKKALRVI 172 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~--~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-~~~A~~~~~~a~~~~ 172 (394)
+|....++...+.++...|+ +++++.++.++++. +|....++...+.+....|. +++++.++.++++..
T Consensus 104 ~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~--------dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~ 175 (331)
T 3dss_A 104 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEA--------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRN 175 (331)
T ss_dssp CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHC
Confidence 67778899999999999994 89999999999986 56666789999999999998 699999999999863
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHc--------------CChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIV--------------GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASY 238 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 238 (394)
. .+ ..++...+.++... +.++++++++.+++.+ +|....+++.+..++
T Consensus 176 p-------~N---~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~--------~P~d~SaW~Y~r~ll 237 (331)
T 3dss_A 176 F-------SN---YSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPNDQSAWFYHRWLL 237 (331)
T ss_dssp S-------CC---HHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH--------STTCHHHHHHHHHHH
T ss_pred C-------CC---HHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHH
Confidence 2 22 34557777777766 4578888998888875 456666776555555
Q ss_pred HHc-----------ccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH---hhcChHHHHHHHHHHHHH
Q 016124 239 SRS-----------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY---HLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 239 ~~~-----------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~---~~g~~~~A~~~~~~a~~~ 299 (394)
... +.++++++.+.+++++ .|+...++..++.+.. ..|..++...++.+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~l~~el~~~~elle~--------~pd~~w~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 304 (331)
T 3dss_A 238 GAGSGRCELSVEKSTVLQSELESCKELQEL--------EPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAV 304 (331)
T ss_dssp HSSSCGGGCCHHHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHH
T ss_pred HhccCccccchHHHHHHHHHHHHHHHHHhh--------CcccchHHHHHHHHHHhhcccccHHHHHHHHHHHHHh
Confidence 544 4577888888888774 3444555555544332 246667777777777654
No 158
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.41 E-value=6.7e-12 Score=92.94 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=93.8
Q ss_pred hHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHh
Q 016124 54 SILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKV 133 (394)
Q Consensus 54 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 133 (394)
.+..+..+..+|.++...|++++|+..|++++.+ .|....++..+|.++...|++++|+..|++++.+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~---- 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSI--------APANPIYLSNRAAAYSASGQHEKAAEDAELATVV---- 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----
Confidence 4567788999999999999999999999999987 4566789999999999999999999999999987
Q ss_pred hCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 134 YGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
+|....++.++|.++...|++++|+..|++++++..
T Consensus 75 ----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 110 (164)
T 3sz7_A 75 ----DPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEG 110 (164)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred ----CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence 344567899999999999999999999999999864
No 159
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.41 E-value=1.5e-11 Score=90.87 Aligned_cols=130 Identities=15% Similarity=0.090 Sum_probs=102.7
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC-CCc-------hHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM-SLD-------DSIMENMRIDLAELLHIVGRGQEGRELLE 210 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 210 (394)
...+..+...|..+...|+|++|+..|.+++.+....... .+. .+....++.++|.++...|++++|+..++
T Consensus 8 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 8 LKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 4456788999999999999999999999999986542100 111 45556788999999999999999999999
Q ss_pred HHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcch-HHHHHHHHHHHhhc
Q 016124 211 ECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSIS-FPMLHLGITLYHLN 284 (394)
Q Consensus 211 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~-~~~~~la~~~~~~g 284 (394)
+++.+ +|....++..+|.++...|++++|+..|++++.+ .|... .+...++.+....+
T Consensus 88 ~al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--------~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 88 EVLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--------HPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CGGGHHHHHHHHHHHHHHHH
T ss_pred HHHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHH
Confidence 99986 4667789999999999999999999999999985 34433 34445555544433
No 160
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.41 E-value=6.2e-13 Score=115.44 Aligned_cols=155 Identities=19% Similarity=0.188 Sum_probs=123.0
Q ss_pred HhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC-------CchHHH
Q 016124 70 SIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE-------NDGRVG 142 (394)
Q Consensus 70 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-------~~~~~~ 142 (394)
..+++++|+..++.++.. .+..+..+..+|..+...|++++|+..|++++.+....... ..+...
T Consensus 246 ~l~~~~~A~~~~~~~~~~--------~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~ 317 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE--------KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLL 317 (457)
T ss_dssp EEEEEECCCCGGGSCHHH--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHH--------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHH
Confidence 456677888777776665 35567889999999999999999999999999975331000 012346
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 222 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 222 (394)
.++.++|.++..+|++++|+..+++++++.. +. ..+++++|.+|..+|++++|+..|++++++
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p-------~~---~~a~~~~g~a~~~~g~~~~A~~~~~~al~l------- 380 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKALGLDS-------AN---EKGLYRRGEAQLLMNEFESAKGDFEKVLEV------- 380 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-------
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC-------cc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-------
Confidence 7899999999999999999999999999743 22 456799999999999999999999999875
Q ss_pred CCccHHHHHHHHHHHHHHcccHHHHHHH
Q 016124 223 EHPSFVTHLLNLAASYSRSKNFVEAERL 250 (394)
Q Consensus 223 ~~~~~~~~~~~la~~~~~~g~~~~A~~~ 250 (394)
.|....++..++.++...+++++|...
T Consensus 381 -~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 381 -NPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp -C----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667889999999999999888753
No 161
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.41 E-value=4.1e-13 Score=116.98 Aligned_cols=181 Identities=10% Similarity=-0.012 Sum_probs=131.2
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+..+.++..+|..+...|++++|+..|++++++.. +. ..++.++|.++..+|++++|+..+++++++
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p-------~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--- 69 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNP-------SN---AIYYGNRSLAYLRTECYGYALGDATRAIEL--- 69 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS---
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCC-------cc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh---
Confidence 34455677888999999999999999999999742 22 556789999999999999999999999985
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHH--HHhhcChHHHHHHHH--
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGIT--LYHLNRDKEAEKLVL-- 294 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~--~~~~g~~~~A~~~~~-- 294 (394)
+|....++.++|.++..+|++++|+..+++++++ .|....++..++.+ +...|++++|++.++
T Consensus 70 -----~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~ 136 (477)
T 1wao_1 70 -----DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV--------KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHK 136 (477)
T ss_dssp -----CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------STTCTTHHHHHHHHHHHHHHHHHCCC------C
T ss_pred -----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 5667789999999999999999999999999985 34444567777777 888999999999999
Q ss_pred ---------HHHHHHHHHcCCCChh---HHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHh
Q 016124 295 ---------EALYIREIAFGKDSLP---VGEALDCLVSIQTRLGEDD-TKLLELLKRVLRIQER 345 (394)
Q Consensus 295 ---------~a~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~g~~~-~~A~~~~~~al~~~~~ 345 (394)
+++.+.....++..+. ....+..+...+...+... ..+...+.++.++..+
T Consensus 137 ~~~~~~~~~~al~~~~~~~~~~~~~~~itl~~l~~lie~l~~~~~l~e~~v~~L~~~a~eil~~ 200 (477)
T 1wao_1 137 RSVVDSLDIESMTIEDEYSGPKLEDGKVTISFMKELMQWYKDQKKLHRKCAYQILVQVKEVLSK 200 (477)
T ss_dssp CSTTTCCTTSSCCCCTTCCSCCCGGGSCCHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHT
T ss_pred chhHhhhhhhhccccccccccccccccccHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHcc
Confidence 5555443333443443 2233344444454444433 2455577777777654
No 162
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.40 E-value=2e-10 Score=93.80 Aligned_cols=245 Identities=9% Similarity=-0.048 Sum_probs=181.3
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh-chhHHHHHHHHHHHHHHH
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIG-RAKKAVEIYHRVITILEL 90 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~~ 90 (394)
.|+...++..+..+....+..++|+..+.+++.+ .|....+++..+.++...| .+++++..+.+++..
T Consensus 50 ~~~y~~~~~~~r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~--- 118 (349)
T 3q7a_A 50 SEEYKDAMDYFRAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQ--- 118 (349)
T ss_dssp CHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHT---
T ss_pred CHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHh---
Confidence 4566677777776777777778999999999987 3455677888999999999 599999999999875
Q ss_pred hcCCCCcchHhhhHhHHHHHHHh-C-cHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHH--------H
Q 016124 91 NRGTESADLVLPLFSLGSLFIKE-G-KAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAE--------E 160 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~-g-~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------~ 160 (394)
+|....+++..+.++... + ++++++.++.++++. +|....++...+.+....|.++ +
T Consensus 119 -----nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~--------dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~e 185 (349)
T 3q7a_A 119 -----NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLP--------DPKNYHTWAYLHWLYSHFSTLGRISEAQWGS 185 (349)
T ss_dssp -----TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS--------CTTCHHHHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHhccccccchhhHHH
Confidence 677888999999999988 7 889999998888764 5666678888888888888777 9
Q ss_pred HHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC-------hHHHHHHHHHHHHHHHHhhCCCCccHHHHHHH
Q 016124 161 AVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR-------GQEGRELLEECLLITEKYKGKEHPSFVTHLLN 233 (394)
Q Consensus 161 A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 233 (394)
+++++.++++..... ..++...+.++...++ ++++++++++++.+ +|....+++.
T Consensus 186 ELe~~~k~I~~dp~N----------~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~--------~P~n~SaW~Y 247 (349)
T 3q7a_A 186 ELDWCNEMLRVDGRN----------NSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHL--------IPHNVSAWNY 247 (349)
T ss_dssp HHHHHHHHHHHCTTC----------HHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCC----------HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHh--------CCCCHHHHHH
Confidence 999999998864321 4567888889888887 67888888888875 5667778888
Q ss_pred HHHHHHHcccHHH------------HHH-HHHHHHHHHHhhcCC-----CCCcchHHHHHHHHHHHhhcChHHHHHHHHH
Q 016124 234 LAASYSRSKNFVE------------AER-LLRICLDIMTKTVGP-----DDQSISFPMLHLGITLYHLNRDKEAEKLVLE 295 (394)
Q Consensus 234 la~~~~~~g~~~~------------A~~-~~~~a~~~~~~~~~~-----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (394)
+..++...|+... .+. .+....+.+....+. ..+....++..|+.+|...|+.++|.+.++.
T Consensus 248 lr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~ 327 (349)
T 3q7a_A 248 LRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEK 327 (349)
T ss_dssp HHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 8888887776410 000 011111222222211 1245667888999999999999999988887
Q ss_pred HHH
Q 016124 296 ALY 298 (394)
Q Consensus 296 a~~ 298 (394)
..+
T Consensus 328 l~~ 330 (349)
T 3q7a_A 328 LSS 330 (349)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 163
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.40 E-value=1.8e-12 Score=97.39 Aligned_cols=125 Identities=13% Similarity=0.164 Sum_probs=102.2
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhh
Q 016124 24 SMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPL 103 (394)
Q Consensus 24 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 103 (394)
..+...|++++|+..+++++... |....++..+|.++...|++++|+.+|++++.+. |....++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~ 81 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRAN--------PQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR--------GENAELY 81 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHC--------CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------CSCHHHH
T ss_pred hhhhhccCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHH
Confidence 33567899999999999998862 3335678999999999999999999999999873 3456788
Q ss_pred HhHHHH-HHHhCcH--HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 104 FSLGSL-FIKEGKA--VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 104 ~~l~~~-~~~~g~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
..+|.+ +...|++ ++|+..+++++.. .|....++..+|.++...|++++|+..+++++++.
T Consensus 82 ~~la~~l~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 145 (177)
T 2e2e_A 82 AALATVLYYQASQHMTAQTRAMIDKALAL--------DSNEITALMLLASDAFMQANYAQAIELWQKVMDLN 145 (177)
T ss_dssp HHHHHHHHHHTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCcchHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhC
Confidence 999999 8899999 9999999999987 34445678899999999999999999999999864
No 164
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.40 E-value=5.2e-12 Score=109.69 Aligned_cols=143 Identities=17% Similarity=0.282 Sum_probs=116.4
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhC-------CchHHHHHHHHHHHHHHHHhhchhHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG-------KTSILLVTSLLGMAKVLGSIGRAKKAVEIYHR 83 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 83 (394)
..|..+..+..+|..++..|+|++|+..|++++.+...... ...+....++.++|.++...|++++|+..|++
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 35678889999999999999999999999999997543100 01234478899999999999999999999999
Q ss_pred HHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHH
Q 016124 84 VITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVE 163 (394)
Q Consensus 84 al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 163 (394)
++.+ .|....+++++|.++..+|++++|+..|++++++ .|....++..++.++...+++++|..
T Consensus 343 al~~--------~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--------~P~~~~a~~~l~~~~~~~~~~~~a~~ 406 (457)
T 1kt0_A 343 ALGL--------DSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--------NPQNKAARLQISMCQKKAKEHNERDR 406 (457)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------C----CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhc--------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997 4567889999999999999999999999999986 45556788999999999999988875
Q ss_pred H-HHHHH
Q 016124 164 L-YKKAL 169 (394)
Q Consensus 164 ~-~~~a~ 169 (394)
. +.+++
T Consensus 407 ~~~~~~f 413 (457)
T 1kt0_A 407 RIYANMF 413 (457)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 3 44433
No 165
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.40 E-value=5.9e-12 Score=94.59 Aligned_cols=122 Identities=12% Similarity=0.128 Sum_probs=99.9
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHH
Q 016124 68 LGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCS 147 (394)
Q Consensus 68 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 147 (394)
+...|++++|+..+++++.. .|....++..+|.++...|++++|+.+|++++.+. |....++..
T Consensus 20 ~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~ 83 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA--------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR--------GENAELYAA 83 (177)
T ss_dssp CC-----CCCCHHHHHHHHH--------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH--------CSCHHHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC--------CCCHHHHHH
Confidence 45678999999999999886 45667889999999999999999999999999873 223457889
Q ss_pred HHHH-HHHCCCH--HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 148 LAHA-KCANGNA--EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 148 la~~-~~~~g~~--~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
+|.+ +...|++ ++|+..+++++... |+. ..++..+|.++...|++++|+..+++++..
T Consensus 84 la~~l~~~~~~~~~~~A~~~~~~al~~~-------p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 84 LATVLYYQASQHMTAQTRAMIDKALALD-------SNE---ITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHHC-------TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHhC-------CCc---HHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 9999 8899999 99999999999863 222 345688999999999999999999999875
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.39 E-value=8.2e-11 Score=96.07 Aligned_cols=241 Identities=12% Similarity=-0.012 Sum_probs=176.8
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHhcccC
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG-NAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
..++..+..+....+..++|+..+.+++.+ +|....+++..+.++...| .+++++.++.+++...
T Consensus 54 ~~~~~~~r~~~~~~e~se~AL~lt~~~L~~--------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~n------ 119 (349)
T 3q7a_A 54 KDAMDYFRAIAAKEEKSERALELTEIIVRM--------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQN------ 119 (349)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTT------
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHh--------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhC------
Confidence 344455555556666778999999999987 5666678999999999999 5999999999999753
Q ss_pred CCchHHHHHHHHHHHHHHHHc-C-ChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHH--------HHH
Q 016124 179 SLDDSIMENMRIDLAELLHIV-G-RGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFV--------EAE 248 (394)
Q Consensus 179 ~~~~~~~~~~~~~la~~~~~~-g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~--------~A~ 248 (394)
|.. ..++...+.++... + ++++++.++.+++. .+|....++...+.+....|.++ +++
T Consensus 120 -PKn---y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~--------~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eEL 187 (349)
T 3q7a_A 120 -LKS---YQVWHHRLLLLDRISPQDPVSEIEYIHGSLL--------PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSEL 187 (349)
T ss_dssp -CCC---HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTS--------SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred -CCc---HHHHHHHHHHHHHhcCCChHHHHHHHHHHHH--------hCCCCHHHHHHHHHHHHHhccccccchhhHHHHH
Confidence 333 44567788888887 7 89999999888875 46777889999999999988888 899
Q ss_pred HHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcC-------hHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHH
Q 016124 249 RLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNR-------DKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSI 321 (394)
Q Consensus 249 ~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~-------~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (394)
+++.++++. +|....++...+.++...++ ++++++++.+++.+. |....++..+..+
T Consensus 188 e~~~k~I~~--------dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~--------P~n~SaW~Ylr~L 251 (349)
T 3q7a_A 188 DWCNEMLRV--------DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLI--------PHNVSAWNYLRGF 251 (349)
T ss_dssp HHHHHHHHH--------CTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHH
T ss_pred HHHHHHHHh--------CCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhC--------CCCHHHHHHHHHH
Confidence 999988873 57778899999999998887 678888888887753 5556678888888
Q ss_pred HHHhCCCch-----------HHHH-HHHHHHHHHHhhcCCC-----CHHHHHHHHHHHHHHHHhcCchhhhhhHHHHH
Q 016124 322 QTRLGEDDT-----------KLLE-LLKRVLRIQEREFGSE-----SEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLS 382 (394)
Q Consensus 322 ~~~~g~~~~-----------~A~~-~~~~al~~~~~~~~~~-----~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 382 (394)
+...|+... ..+. .+....+......+.. .+....++.-|+.+|...|+.++|.++++...
T Consensus 252 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~ 329 (349)
T 3q7a_A 252 LKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLS 329 (349)
T ss_dssp HHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCSSCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhcCCCcccccccccccccccccccchhHHHHHHHHHhcccccccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 888887510 0000 0122223333332221 13445678889999999999999999998865
No 167
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.39 E-value=2.6e-11 Score=85.76 Aligned_cols=116 Identities=11% Similarity=0.123 Sum_probs=95.0
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCc
Q 016124 18 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA 97 (394)
Q Consensus 18 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 97 (394)
.++.+|..+...|++++|+..|++++.. .++++....++..+|.++...|++++|+..|++++.. .++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~ 73 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHD 73 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTST
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCc
Confidence 4678999999999999999999999886 3455555678999999999999999999999999986 33444
Q ss_pred chHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHH
Q 016124 98 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSL 148 (394)
Q Consensus 98 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l 148 (394)
....++..+|.++...|++++|+..+++++... ++++....+...+
T Consensus 74 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l 119 (129)
T 2xev_A 74 KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERL 119 (129)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHH
Confidence 557889999999999999999999999999862 4455444444333
No 168
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.37 E-value=1.5e-11 Score=86.24 Aligned_cols=118 Identities=18% Similarity=0.332 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
...++..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+..+++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~------- 72 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL------- 72 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC--------cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-------
Confidence 46778999999999999999999999998762 223457889999999999999999999999876
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG 156 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g 156 (394)
.|....++..+|.++...|++++|..++++++.. .|....++..++.++...|
T Consensus 73 -~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 73 -DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHC
T ss_pred -CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHhcc
Confidence 3445678889999999999999999999999886 2333456677787776543
No 169
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.37 E-value=3.9e-11 Score=84.80 Aligned_cols=103 Identities=13% Similarity=0.139 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCch
Q 016124 60 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG 139 (394)
Q Consensus 60 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 139 (394)
.++.+|.++...|++++|+..|++++.. .++++....++..+|.++...|++++|+..|++++.. .++++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~ 73 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHD 73 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTST
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCc
Confidence 4677899999999999999999999886 3445555578999999999999999999999999986 34455
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 140 RVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 140 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
....++..+|.++...|++++|+..+++++...
T Consensus 74 ~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~ 106 (129)
T 2xev_A 74 KAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY 106 (129)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 557789999999999999999999999999864
No 170
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.36 E-value=6.1e-11 Score=83.93 Aligned_cols=124 Identities=15% Similarity=0.086 Sum_probs=99.6
Q ss_pred hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC
Q 016124 99 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
.+..+..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++......
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~--- 71 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN--- 71 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS---
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc---
Confidence 4567889999999999999999999999986 23345678999999999999999999999999987652
Q ss_pred CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcc
Q 016124 179 SLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK 242 (394)
Q Consensus 179 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 242 (394)
.++.+....++..+|.++...|++++|+.++++++.. .|. ......++.+....+
T Consensus 72 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~~~-~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 72 REDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE--------HRT-PDVLKKCQQAEKILK 126 (131)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CCC-HHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--------CCC-HHHHHHHHHHHHHHH
Confidence 3445555778899999999999999999999999885 122 344555665554433
No 171
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.36 E-value=9.3e-12 Score=89.12 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=92.3
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|..+..+..+|..++..|++++|+..|++++... |....++..+|.++...|++++|+..+++++.+
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~---- 72 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRN--------PLVAVYYTNRALCYLKMQQPEQALADCRRALEL---- 72 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC--------cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----
Confidence 34456788999999999999999999999999872 334568999999999999999999999999987
Q ss_pred cCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 92 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
.|....++..+|.++...|++++|+..|++++.+...
T Consensus 73 ----~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 73 ----DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp ----CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ----CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 4556788999999999999999999999999998654
No 172
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.35 E-value=5.2e-11 Score=83.46 Aligned_cols=117 Identities=21% Similarity=0.375 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
..++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-------- 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-------- 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh--------
Confidence 567889999999999999999999999876 3445678899999999999999999999999876
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcC
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG 200 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 200 (394)
.|....++..+|.++...|++++|+.++++++... |+.+ .++..++.++...|
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-------~~~~---~~~~~l~~~~~~~g 125 (125)
T 1na0_A 73 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-------PNNA---EAKQNLGNAKQKQG 125 (125)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-------TTCH---HHHHHHHHHHHHHC
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-------CCcH---HHHHHHHHHHHhcc
Confidence 23334578899999999999999999999999863 2222 34466777776544
No 173
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.34 E-value=2.7e-11 Score=101.82 Aligned_cols=134 Identities=13% Similarity=0.148 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHh--------CCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY--------GKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVI 85 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 85 (394)
..+..+..+|..++..|++++|+..|++++.+..... ....|....++.++|.++...|++++|+.++++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4567789999999999999999999999999765420 11356778899999999999999999999999999
Q ss_pred HHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHH
Q 016124 86 TILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVE 163 (394)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 163 (394)
++ .|....+++.+|.++...|++++|+..|++++++ .|....++..++.++...++++++..
T Consensus 301 ~~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--------~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 301 EI--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--------APEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp TT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 85 4667889999999999999999999999999987 23334567788888888888777654
No 174
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.34 E-value=7.2e-11 Score=83.56 Aligned_cols=106 Identities=8% Similarity=0.152 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCC
Q 016124 57 LVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGE 136 (394)
Q Consensus 57 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 136 (394)
.+..+..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+.++++++...... +.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~ 73 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL--------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN-RE 73 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS-TT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc-ch
Confidence 4567889999999999999999999999986 34456788999999999999999999999999986542 22
Q ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 137 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
+.+....++..+|.++...|++++|+.+++++++.
T Consensus 74 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 74 DYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 33444778999999999999999999999999985
No 175
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.32 E-value=1.2e-10 Score=83.25 Aligned_cols=105 Identities=13% Similarity=0.085 Sum_probs=90.9
Q ss_pred CcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 96 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
.+..+..+..+|.++...|++++|+..|.+++.. .|....++.++|.++...|++++|+..+++++.+..
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-- 74 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALELDG-- 74 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh--------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCc--
Confidence 4556788999999999999999999999999987 344456899999999999999999999999998642
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 176 NYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 176 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+. ..++..+|.++...|++++|+..+++++.+...
T Consensus 75 -----~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 75 -----QS---VKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp -----TC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -----hh---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 22 346789999999999999999999999998765
No 176
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=3.2e-11 Score=87.52 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=92.6
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
+|..+..+..+|..+...|++++|+.+|++++.. .++++....++..+|.++...|++++|+..+++++..
T Consensus 24 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~---- 94 (148)
T 2dba_A 24 GASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK---- 94 (148)
T ss_dssp TCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred chHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh----
Confidence 4556788899999999999999999999999875 3444556788999999999999999999999999987
Q ss_pred cCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 92 RGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
.|....++..+|.++...|++++|+.++++++.+
T Consensus 95 ----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 95 ----DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp ----TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ----CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 3455788999999999999999999999999987
No 177
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.31 E-value=1.5e-11 Score=85.58 Aligned_cols=97 Identities=14% Similarity=0.026 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCch
Q 016124 60 SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDG 139 (394)
Q Consensus 60 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 139 (394)
.++.+|..+...|++++|+..+++++.. .|....++..+|.++...|++++|+..|++++++ .|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P 82 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML--------DP 82 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC
Confidence 4677899999999999999999999987 5667889999999999999999999999999987 34
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 140 RVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 140 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
....++..+|.++...|++++|+..+++++++.
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 115 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLSQ 115 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 445688999999999999999999999998753
No 178
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.31 E-value=7.3e-10 Score=88.70 Aligned_cols=185 Identities=12% Similarity=0.076 Sum_probs=128.1
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 179 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 179 (394)
...+..+|.++...|++++|+..+.+.+.. ++ .+....+...++.++..+|+++.|.+.++++.+..+.. ..
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~--~~ 171 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDT--VS 171 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHH--HH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccc--cc
Confidence 344568999999999999999999998643 11 13667788889999999999999999999987652100 00
Q ss_pred CchHHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHhhCCCCcc--HHHHHHHHHHHHHHcccHHHHHHHHHHHH
Q 016124 180 LDDSIMENMRIDLAELLHIVG--RGQEGRELLEECLLITEKYKGKEHPS--FVTHLLNLAASYSRSKNFVEAERLLRICL 255 (394)
Q Consensus 180 ~~~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 255 (394)
.+...+ +...-|.+....| ++.+|..+|+++.. ..|. ....+.+ ++..+|++++|...++..+
T Consensus 172 ~~d~~l--~~Laea~v~l~~g~~~~q~A~~~f~El~~--------~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~ 238 (310)
T 3mv2_B 172 GDNEMI--LNLAESYIKFATNKETATSNFYYYEELSQ--------TFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLL 238 (310)
T ss_dssp HHHHHH--HHHHHHHHHHHHTCSTTTHHHHHHHHHHT--------TSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHH
T ss_pred cchHHH--HHHHHHHHHHHhCCccHHHHHHHHHHHHH--------hCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHH
Confidence 011211 2222344455556 99999999999654 2343 2233333 8999999999999999766
Q ss_pred HHHHhhcCCC--CCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHH
Q 016124 256 DIMTKTVGPD--DQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVG 312 (394)
Q Consensus 256 ~~~~~~~~~~--~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 312 (394)
+........+ .|....++.+++.+....|+ +|.+++.++.... |+||.+.
T Consensus 239 ~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~-----P~hp~i~ 290 (310)
T 3mv2_B 239 SDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLD-----HEHAFIK 290 (310)
T ss_dssp SHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTT-----CCCHHHH
T ss_pred HhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhC-----CCChHHH
Confidence 5432210000 25677888899888888997 8888888887754 7887643
No 179
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.31 E-value=1.1e-10 Score=98.08 Aligned_cols=135 Identities=18% Similarity=0.131 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc------cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 016124 141 VGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN------YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLL 214 (394)
Q Consensus 141 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~------~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 214 (394)
.+..+..+|..+...|++++|+..|++++++..... ......+....++.++|.++..+|++++|+.+++++++
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 445688999999999999999999999999654310 00013455677889999999999999999999999997
Q ss_pred HHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHH
Q 016124 215 ITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEK 291 (394)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 291 (394)
+ .|....++..+|.++...|++++|+..|++++++ .|....++..++.++...++.+++..
T Consensus 302 ~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l--------~P~~~~~~~~l~~~~~~~~~~~~a~k 362 (370)
T 1ihg_A 302 I--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI--------APEDKAIQAELLKVKQKIKAQKDKEK 362 (370)
T ss_dssp T--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 4667889999999999999999999999999985 35556778889999998888887754
No 180
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.30 E-value=1.8e-11 Score=85.17 Aligned_cols=96 Identities=11% Similarity=0.019 Sum_probs=86.0
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCc
Q 016124 18 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESA 97 (394)
Q Consensus 18 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 97 (394)
.++.+|..+...|++++|+..|++++.. .|....++..+|.++...|++++|+..|++++++ .|
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--------~P 82 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQK--------EPEREEAWRSLGLTQAENEKDGLAIIALNHARML--------DP 82 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CT
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CC
Confidence 4678999999999999999999999986 2445678899999999999999999999999997 56
Q ss_pred chHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 98 DLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 98 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
....++..+|.++...|++++|+..++++++.
T Consensus 83 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 83 KDIAVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 66788999999999999999999999999876
No 181
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.29 E-value=1.1e-09 Score=87.59 Aligned_cols=264 Identities=12% Similarity=0.037 Sum_probs=164.7
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcc
Q 016124 19 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD 98 (394)
Q Consensus 19 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 98 (394)
++.+ .-.+-.|+|..++.-..+ +.+..+.. ....+.++|..+|++.... .+.|.
T Consensus 17 lf~i-kn~fy~G~yq~~i~e~~~--------~~~~~~~~--~~~~~~Rs~iAlg~~~~~~---------------~~~~~ 70 (310)
T 3mv2_B 17 YFNI-KQNYYTGNFVQCLQEIEK--------FSKVTDNT--LLFYKAKTLLALGQYQSQD---------------PTSKL 70 (310)
T ss_dssp THHH-HHHHTTTCHHHHTHHHHT--------SSCCCCHH--HHHHHHHHHHHTTCCCCCC---------------SSSTT
T ss_pred HHHH-HHHHHhhHHHHHHHHHHh--------cCccchHH--HHHHHHHHHHHcCCCccCC---------------CCCHH
Confidence 3444 334558999888873321 12233332 4455678888889887421 12222
Q ss_pred hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC
Q 016124 99 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
..+...++..+. ++ |+..+++.+.. ..+. ..++..+|.++...|++++|+..+.+.+..
T Consensus 71 -~~a~~~la~~~~--~~---a~~~l~~l~~~-------~~~~-~~~~~~la~i~~~~g~~eeAL~~l~~~i~~------- 129 (310)
T 3mv2_B 71 -GKVLDLYVQFLD--TK---NIEELENLLKD-------KQNS-PYELYLLATAQAILGDLDKSLETCVEGIDN------- 129 (310)
T ss_dssp -HHHHHHHHHHHT--TT---CCHHHHHTTTT-------SCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHTS-------
T ss_pred -HHHHHHHHHHhc--cc---HHHHHHHHHhc-------CCCC-cHHHHHHHHHHHHcCCHHHHHHHHHHHhcc-------
Confidence 223333444332 22 56666555432 1122 233468999999999999999999998652
Q ss_pred CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCcc----HHHHHHHH--HHHHHHcc--cHHHHHHH
Q 016124 179 SLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS----FVTHLLNL--AASYSRSK--NFVEAERL 250 (394)
Q Consensus 179 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~----~~~~~~~l--a~~~~~~g--~~~~A~~~ 250 (394)
++ ......++..++.++..+|+.+.|.+.+++..+. +|+ .-.+...+ +++....| ++.+|..+
T Consensus 130 ~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~--------~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~ 200 (310)
T 3mv2_B 130 DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYTNA--------IEDTVSGDNEMILNLAESYIKFATNKETATSNFYY 200 (310)
T ss_dssp SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHH
T ss_pred CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--------CccccccchHHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 22 1223455677899999999999999999987664 231 11233344 44466566 99999999
Q ss_pred HHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCC--ChhHHHHHHHHHHHHHHhC
Q 016124 251 LRICLDIMTKTVGPDDQS--ISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKD--SLPVGEALDCLVSIQTRLG 326 (394)
Q Consensus 251 ~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~g 326 (394)
|+++.+ ..|. ....+.+ ++..+|++++|...++.+++..-..-..+ .|..+.++.+++.+....|
T Consensus 201 f~El~~--------~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 201 YEELSQ--------TFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp HHHHHT--------TSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--------hCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 999754 2343 2223333 89999999999999997665531100000 1445667888888888888
Q ss_pred CCchHHHHHHHHHHHHHHhhcCCCCHHHHHH
Q 016124 327 EDDTKLLELLKRVLRIQEREFGSESEEVMLT 357 (394)
Q Consensus 327 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 357 (394)
+ +|.++++++.+. .|+||...+.
T Consensus 270 k---~a~~l~~qL~~~-----~P~hp~i~d~ 292 (310)
T 3mv2_B 270 L---DTEDLTNQLVKL-----DHEHAFIKHH 292 (310)
T ss_dssp C---TTHHHHHHHHHT-----TCCCHHHHHH
T ss_pred h---HHHHHHHHHHHh-----CCCChHHHHH
Confidence 6 677888888764 4778766543
No 182
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=9.3e-11 Score=81.25 Aligned_cols=99 Identities=13% Similarity=0.043 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT 94 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 94 (394)
.+..+..+|..+...|++++|+..+++++... |....++..+|.++...|++++|+..+++++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------- 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLD--------PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDL------- 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-------
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHh-------
Confidence 35678899999999999999999999999862 233567889999999999999999999999987
Q ss_pred CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 95 ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
.|....++..+|.++...|++++|...+++++..
T Consensus 68 -~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 68 -KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp -CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred -CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 3455778999999999999999999999999875
No 183
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.28 E-value=1.3e-11 Score=102.62 Aligned_cols=145 Identities=17% Similarity=0.089 Sum_probs=90.1
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhC--C-------chHHHHHHHHHHHHHHHHhhchhHHHHHHH
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYG--K-------TSILLVTSLLGMAKVLGSIGRAKKAVEIYH 82 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--~-------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 82 (394)
.+..+..+..+|..++..|++++|+..|++++.+...... . .......++.++|.++...|++++|+..++
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4567888999999999999999999999999987422100 0 000011478999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHH-HHHCCCHHHH
Q 016124 83 RVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHA-KCANGNAEEA 161 (394)
Q Consensus 83 ~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~A 161 (394)
+++.+ .|....+++++|.++..+|++++|+..|++++.+ .|....++..++.+ ....+..+++
T Consensus 255 ~al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l--------~p~~~~a~~~L~~l~~~~~~~~~~a 318 (338)
T 2if4_A 255 IVLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY--------APDDKAIRRELRALAEQEKALYQKQ 318 (338)
T ss_dssp HHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------------------------
T ss_pred HHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99987 4566789999999999999999999999999876 34445567777777 4456677888
Q ss_pred HHHHHHHHHHH
Q 016124 162 VELYKKALRVI 172 (394)
Q Consensus 162 ~~~~~~a~~~~ 172 (394)
...|.+++...
T Consensus 319 ~~~~~~~l~~~ 329 (338)
T 2if4_A 319 KEMYKGIFKGK 329 (338)
T ss_dssp -----------
T ss_pred HHHHHHhhCCC
Confidence 88998888754
No 184
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.28 E-value=2.1e-10 Score=83.08 Aligned_cols=119 Identities=10% Similarity=0.007 Sum_probs=98.4
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
+.....+..+|..+...|++++|+..|+++++. .++++....++.++|.++...|++++|+..+++++..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-------~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--- 94 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-------DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK--- 94 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-------cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh---
Confidence 445678899999999999999999999999874 4555555678899999999999999999999999886
Q ss_pred hhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHH
Q 016124 219 YKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITL 280 (394)
Q Consensus 219 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 280 (394)
.|....++..+|.++...|++++|+..+++++.+ .|....++..++.+.
T Consensus 95 -----~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 95 -----DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSL--------EPKNKVFQEALRNIS 143 (148)
T ss_dssp -----TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHH
T ss_pred -----CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc--------CCCcHHHHHHHHHHH
Confidence 3445778899999999999999999999999984 344455555555554
No 185
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.28 E-value=1.6e-08 Score=91.05 Aligned_cols=232 Identities=13% Similarity=0.135 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHhcccCCCchHHHHHHHHHHHHH
Q 016124 117 VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAV-ELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL 195 (394)
Q Consensus 117 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~ 195 (394)
+.....|++++.. .|.....+...+..+...|+.++|. ..|++++..+. .. ...+...+..
T Consensus 326 ~Rv~~~Ye~aL~~--------~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P-------~s---~~Lwl~~a~~ 387 (679)
T 4e6h_A 326 ARMTYVYMQAAQH--------VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIP-------NS---AVLAFSLSEQ 387 (679)
T ss_dssp HHHHHHHHHHHHH--------TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCT-------TC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--------cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCC-------CC---HHHHHHHHHH
Confidence 3455678888775 2344567788888888899999997 99999987542 22 2345678889
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHhhC---CCCc-----------cHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhh
Q 016124 196 LHIVGRGQEGRELLEECLLITEKYKG---KEHP-----------SFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKT 261 (394)
Q Consensus 196 ~~~~g~~~~A~~~~~~a~~~~~~~~~---~~~~-----------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 261 (394)
....|++++|...|++++........ +..| ....++...+.+..+.|+.+.|..+|.+|++..
T Consensus 388 ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~--- 464 (679)
T 4e6h_A 388 YELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK--- 464 (679)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG---
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---
Confidence 99999999999999999986421110 0012 244567777888888999999999999998731
Q ss_pred cCCCCCcchHHHHHHHHHHHhhc-ChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 262 VGPDDQSISFPMLHLGITLYHLN-RDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 262 ~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
.+.....+...|.+-...| +.+.|..+|+.+++.. ++.+. .+...+......|+.+ .|...|++++
T Consensus 465 ----~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~-----p~~~~---~w~~y~~fe~~~~~~~-~AR~lferal 531 (679)
T 4e6h_A 465 ----KLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYF-----ATDGE---YINKYLDFLIYVNEES-QVKSLFESSI 531 (679)
T ss_dssp ----GGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH-----TTCHH---HHHHHHHHHHHHTCHH-HHHHHHHHHT
T ss_pred ----CCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC-----CCchH---HHHHHHHHHHhCCCHH-HHHHHHHHHH
Confidence 1122345556666666655 4899999999999976 34443 4556677778889888 9999999998
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Q 016124 341 RIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
... ++.......+......-...|+.+.+..+.+++.+..++
T Consensus 532 ~~~-----~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~P~ 573 (679)
T 4e6h_A 532 DKI-----SDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKFPE 573 (679)
T ss_dssp TTS-----SSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHSTT
T ss_pred Hhc-----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 632 111245677788888888999999999999999887765
No 186
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.27 E-value=4.4e-10 Score=77.77 Aligned_cols=113 Identities=15% Similarity=0.076 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhC
Q 016124 142 GMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKG 221 (394)
Q Consensus 142 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 221 (394)
+..+..+|.++...|++++|+..+++++.... +. ..++..+|.++...|++++|+..+++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-------~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~------ 67 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDP-------HN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL------ 67 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-------TC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-------Cc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh------
Confidence 45688899999999999999999999998632 22 345688999999999999999999999885
Q ss_pred CCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHH
Q 016124 222 KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITL 280 (394)
Q Consensus 222 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 280 (394)
.|....++..+|.++...|++++|...+++++.. .|....++..++.+.
T Consensus 68 --~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~--------~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 68 --KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKH--------EANNPQLKEGLQNME 116 (118)
T ss_dssp --CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHH
T ss_pred --CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHhh
Confidence 3455678899999999999999999999999872 455556666666554
No 187
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.24 E-value=3.2e-11 Score=83.58 Aligned_cols=90 Identities=13% Similarity=0.174 Sum_probs=76.2
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHH
Q 016124 28 TLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLG 107 (394)
Q Consensus 28 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 107 (394)
..|++++|+.+|++++.+ +.++|....++..+|.++...|++++|+..++++++. .|....++..+|
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~ 68 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ--------FPNHQALRVFYA 68 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCchHHHHHHH
Confidence 468999999999999874 2335788899999999999999999999999999987 455678899999
Q ss_pred HHHHHhCcHHHHHHHHHHHHHHH
Q 016124 108 SLFIKEGKAVDAESVFSRILKIY 130 (394)
Q Consensus 108 ~~~~~~g~~~~A~~~~~~al~~~ 130 (394)
.++...|++++|+..+++++...
T Consensus 69 ~~~~~~g~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 69 MVLYNLGRYEQGVELLLKIIAET 91 (117)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999873
No 188
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.20 E-value=4.4e-11 Score=99.54 Aligned_cols=143 Identities=17% Similarity=0.091 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCC---------CcchHhhhHhHHHHHHHhCcHHHHHHHHHH
Q 016124 55 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTE---------SADLVLPLFSLGSLFIKEGKAVDAESVFSR 125 (394)
Q Consensus 55 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 125 (394)
+..+..+..+|..++..|++++|+..|++++.+........ ......++.++|.++...|++++|+.++++
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45667788999999999999999999999998732110000 000113789999999999999999999999
Q ss_pred HHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHH-HHHcCChHH
Q 016124 126 ILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL-LHIVGRGQE 204 (394)
Q Consensus 126 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~g~~~~ 204 (394)
++.+ +|....+++++|.+|...|++++|+..|++++++.. ++ ..++..++.+ ....+..++
T Consensus 256 al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p-------~~---~~a~~~L~~l~~~~~~~~~~ 317 (338)
T 2if4_A 256 VLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAP-------DD---KAIRRELRALAEQEKALYQK 317 (338)
T ss_dssp HHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------
T ss_pred HHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC-------CC---HHHHHHHHHHHHHHHHHHHH
Confidence 9987 345567899999999999999999999999987642 22 2344667766 344566778
Q ss_pred HHHHHHHHHHH
Q 016124 205 GRELLEECLLI 215 (394)
Q Consensus 205 A~~~~~~a~~~ 215 (394)
+...|.+++..
T Consensus 318 a~~~~~~~l~~ 328 (338)
T 2if4_A 318 QKEMYKGIFKG 328 (338)
T ss_dssp -----------
T ss_pred HHHHHHHhhCC
Confidence 88888887765
No 189
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.18 E-value=1.6e-10 Score=79.18 Aligned_cols=103 Identities=18% Similarity=0.190 Sum_probs=85.7
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
|....++..+|.++...|++++|+.++++++.. .|....++..+|.++...|++++|+..++++++..
T Consensus 3 p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~---- 70 (112)
T 2kck_A 3 DQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVI---- 70 (112)
T ss_dssp CSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS----
T ss_pred CCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC----
Confidence 445678899999999999999999999999986 23334578899999999999999999999999853
Q ss_pred cCCCchHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHH
Q 016124 177 YMSLDDSIMENMRIDLAELLHIV-GRGQEGRELLEECLLI 215 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~a~~~ 215 (394)
+. .....++..+|.++... |++++|+.++++++..
T Consensus 71 ---~~-~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 71 ---ED-EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp ---CC-TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred ---cc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 22 00134668999999999 9999999999998764
No 190
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.17 E-value=2e-10 Score=79.52 Aligned_cols=89 Identities=16% Similarity=0.189 Sum_probs=73.9
Q ss_pred HCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHH
Q 016124 154 ANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLN 233 (394)
Q Consensus 154 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 233 (394)
..|++++|+.+|++++++ +++.|....++.++|.++...|++++|+.++++++.. .|....++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-------~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~ 66 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-------GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ--------FPNHQALRVF 66 (117)
T ss_dssp -----CCCHHHHHHHHSS-------CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHc-------CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCchHHHHH
Confidence 468999999999999874 2234556778899999999999999999999999986 4556788999
Q ss_pred HHHHHHHcccHHHHHHHHHHHHHH
Q 016124 234 LAASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 234 la~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
+|.++...|++++|+..+++++..
T Consensus 67 l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 67 YAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999985
No 191
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.17 E-value=3.2e-09 Score=94.22 Aligned_cols=177 Identities=7% Similarity=-0.033 Sum_probs=148.6
Q ss_pred Hhhch-hHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCc----------HHHHHHHHHHHHHHHHHhhCCCc
Q 016124 70 SIGRA-KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK----------AVDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 70 ~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~----------~~~A~~~~~~al~~~~~~~~~~~ 138 (394)
..|++ ++|+..+.+++.+ +|....+++..+.++...|+ +++++..+.+++.. +
T Consensus 40 ~~~~~~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~--------~ 103 (567)
T 1dce_A 40 QAGELDESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV--------N 103 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH--------C
T ss_pred HcCCCCHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh--------C
Confidence 44544 5779999999987 67788899999999999988 99999999999876 5
Q ss_pred hHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANG--NAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVG-RGQEGRELLEECLLI 215 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~ 215 (394)
|....+|...+.++...| ++++++.++.++++...+. ..+|...+.+....| .++++++++.++++
T Consensus 104 pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N----------~~aW~~R~~~l~~l~~~~~~el~~~~~~I~- 172 (567)
T 1dce_A 104 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN----------FHCWDYRRFVAAQAAVAPAEELAFTDSLIT- 172 (567)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC----------HHHHHHHHHHHHHTCCCHHHHHHHHHTTTT-
T ss_pred CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc----------ccHHHHHHHHHHHcCCChHHHHHHHHHHHH-
Confidence 666778999999999999 7799999999999974332 456788899999999 89999999998876
Q ss_pred HHHhhCCCCccHHHHHHHHHHHHHHc--------------ccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH
Q 016124 216 TEKYKGKEHPSFVTHLLNLAASYSRS--------------KNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY 281 (394)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 281 (394)
.+|....++...+.++... +.++++++++.+++.+ .|....+|..++.++.
T Consensus 173 -------~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~--------~P~~~saW~y~~~ll~ 237 (567)
T 1dce_A 173 -------RNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--------DPNDQSAWFYHRWLLG 237 (567)
T ss_dssp -------TTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH--------CSSCSHHHHHHHHHHS
T ss_pred -------HCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh--------CCCCccHHHHHHHHHh
Confidence 3677788999999998875 6789999999999884 4667788999999998
Q ss_pred hhcChHH
Q 016124 282 HLNRDKE 288 (394)
Q Consensus 282 ~~g~~~~ 288 (394)
..+++++
T Consensus 238 ~~~~~~~ 244 (567)
T 1dce_A 238 RAEPHDV 244 (567)
T ss_dssp CCCCCSC
T ss_pred cCCCccc
Confidence 8887555
No 192
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.11 E-value=6.6e-10 Score=76.07 Aligned_cols=96 Identities=15% Similarity=0.032 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCC
Q 016124 188 MRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQ 267 (394)
Q Consensus 188 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 267 (394)
++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+..+++++.. .|
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~--------~~ 71 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQL--------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINV--------IE 71 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------SC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHh--------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------Cc
Confidence 4577999999999999999999999885 3445678899999999999999999999999983 34
Q ss_pred c--chHHHHHHHHHHHhh-cChHHHHHHHHHHHHH
Q 016124 268 S--ISFPMLHLGITLYHL-NRDKEAEKLVLEALYI 299 (394)
Q Consensus 268 ~--~~~~~~~la~~~~~~-g~~~~A~~~~~~a~~~ 299 (394)
. ...++..+|.++... |++++|+.++++++..
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 72 DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 4 678899999999999 9999999999998763
No 193
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.11 E-value=6.4e-10 Score=79.11 Aligned_cols=87 Identities=11% Similarity=0.122 Sum_probs=76.0
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchh----------HHHHHHHHHHHHHHHhcCCCC
Q 016124 27 STLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAK----------KAVEIYHRVITILELNRGTES 96 (394)
Q Consensus 27 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~----------~A~~~~~~al~~~~~~~~~~~ 96 (394)
.+.+.|++|+..+++++++ .|..+.++.++|.++...|+++ +|+..|++++++ +
T Consensus 13 ~r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------d 76 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------D 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------C
T ss_pred HHHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------C
Confidence 4567899999999999987 3556678999999999998764 999999999998 6
Q ss_pred cchHhhhHhHHHHHHHhC-----------cHHHHHHHHHHHHHH
Q 016124 97 ADLVLPLFSLGSLFIKEG-----------KAVDAESVFSRILKI 129 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g-----------~~~~A~~~~~~al~~ 129 (394)
|....+++++|.+|..+| ++++|+.+|++|+++
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 778899999999999885 899999999999998
No 194
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=2.4e-09 Score=95.00 Aligned_cols=172 Identities=13% Similarity=-0.050 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCC----------HHHHHHHHHHHHHHHHhcccCCCchHHH
Q 016124 116 AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGN----------AEEAVELYKKALRVIKDSNYMSLDDSIM 185 (394)
Q Consensus 116 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 185 (394)
.++|+..+.+++.+ +|....+++..+.++...|+ +++++..+++++....+.
T Consensus 45 ~eeal~~~~~~l~~--------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~---------- 106 (567)
T 1dce_A 45 DESVLELTSQILGA--------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---------- 106 (567)
T ss_dssp SHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC----------
T ss_pred CHHHHHHHHHHHHH--------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC----------
Confidence 36789999999987 56667789999999999888 999999999999864332
Q ss_pred HHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhhc
Q 016124 186 ENMRIDLAELLHIVG--RGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSK-NFVEAERLLRICLDIMTKTV 262 (394)
Q Consensus 186 ~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~ 262 (394)
..+|...+.++...| +++++++.++++++. +|....+|...+.+....| .++++++++.++++
T Consensus 107 y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~--------d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~------ 172 (567)
T 1dce_A 107 YGTWHHRCWLLSRLPEPNWARELELCARFLEA--------DERNFHCWDYRRFVAAQAAVAPAEELAFTDSLIT------ 172 (567)
T ss_dssp HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTT------
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHhh--------ccccccHHHHHHHHHHHcCCChHHHHHHHHHHHH------
Confidence 456788999999999 669999999999986 5677789999999999999 89999999988876
Q ss_pred CCCCCcchHHHHHHHHHHHhh--------------cChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCC
Q 016124 263 GPDDQSISFPMLHLGITLYHL--------------NRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGED 328 (394)
Q Consensus 263 ~~~~~~~~~~~~~la~~~~~~--------------g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 328 (394)
.+|....+|...+.++... +.+++|++++.+++.+. |....+|..++.++...+.+
T Consensus 173 --~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~--------P~~~saW~y~~~ll~~~~~~ 242 (567)
T 1dce_A 173 --RNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTD--------PNDQSAWFYHRWLLGRAEPH 242 (567)
T ss_dssp --TTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHC--------SSCSHHHHHHHHHHSCCCCC
T ss_pred --HCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhC--------CCCccHHHHHHHHHhcCCCc
Confidence 4678889999999998875 56789999999988754 33445788999999888875
Q ss_pred c
Q 016124 329 D 329 (394)
Q Consensus 329 ~ 329 (394)
+
T Consensus 243 ~ 243 (567)
T 1dce_A 243 D 243 (567)
T ss_dssp S
T ss_pred c
Confidence 5
No 195
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=99.09 E-value=8e-08 Score=86.63 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHH-HHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHH
Q 016124 33 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAV-EIYHRVITILELNRGTESADLVLPLFSLGSLFI 111 (394)
Q Consensus 33 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~-~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~ 111 (394)
+.....|++++..+ |.....+...+......|+.++|. ..|++|+.. .|.....+...+.+..
T Consensus 326 ~Rv~~~Ye~aL~~~--------p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~--------~P~s~~Lwl~~a~~ee 389 (679)
T 4e6h_A 326 ARMTYVYMQAAQHV--------CFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQC--------IPNSAVLAFSLSEQYE 389 (679)
T ss_dssp HHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHH--------CTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHH
Confidence 34566788888763 334567788888899999999997 999999875 3444566778899999
Q ss_pred HhCcHHHHHHHHHHHHHHHHHhh------CCCc--------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhccc
Q 016124 112 KEGKAVDAESVFSRILKIYTKVY------GEND--------GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNY 177 (394)
Q Consensus 112 ~~g~~~~A~~~~~~al~~~~~~~------~~~~--------~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 177 (394)
..|++++|...|++++....... .+.+ .....++...+....+.|..+.|..+|.+|++....
T Consensus 390 ~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~--- 466 (679)
T 4e6h_A 390 LNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKL--- 466 (679)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGG---
T ss_pred HhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC---
Confidence 99999999999999998643111 0110 123446777777778889999999999999875211
Q ss_pred CCCchHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 178 MSLDDSIMENMRIDLAELLHIVG-RGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 178 ~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
.. ..++...|.+....+ +++.|..+|+.+++.+ |.....+...+......|+.+.|..+|++++.
T Consensus 467 ---~~---~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~--------p~~~~~w~~y~~fe~~~~~~~~AR~lferal~ 532 (679)
T 4e6h_A 467 ---VT---PDIYLENAYIEYHISKDTKTACKVLELGLKYF--------ATDGEYINKYLDFLIYVNEESQVKSLFESSID 532 (679)
T ss_dssp ---SC---THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH--------TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTT
T ss_pred ---CC---hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC--------CCchHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 11 123344566665655 5899999999999864 22233455667778888999999999999987
Q ss_pred HHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 257 IMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
.. ++.......+......-...|+.+.+....+++.+..
T Consensus 533 ~~-----~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~~ 571 (679)
T 4e6h_A 533 KI-----SDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEKF 571 (679)
T ss_dssp TS-----SSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHS
T ss_pred hc-----CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 32 1112345566777777788999999999999987765
No 196
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.05 E-value=8e-10 Score=78.60 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=76.9
Q ss_pred HHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcH----------HHHHHHHHHHHHHHHHhhCCCc
Q 016124 69 GSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA----------VDAESVFSRILKIYTKVYGEND 138 (394)
Q Consensus 69 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----------~~A~~~~~~al~~~~~~~~~~~ 138 (394)
.+.+.|++|+..+++++++ .|..+.++.++|.++...+++ ++|+..|++++++ +
T Consensus 13 ~r~~~feeA~~~~~~Ai~l--------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~l--------d 76 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKS--------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLI--------D 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH--------C
T ss_pred HHHhHHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHh--------C
Confidence 3567899999999999987 677889999999999999876 5999999999988 5
Q ss_pred hHHHHHHHHHHHHHHHCC-----------CHHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANG-----------NAEEAVELYKKALRVI 172 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g-----------~~~~A~~~~~~a~~~~ 172 (394)
|....+++++|.+|..+| ++++|+.+|++|+++.
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 667788999999999875 8999999999999974
No 197
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.00 E-value=4.3e-09 Score=68.93 Aligned_cols=88 Identities=16% Similarity=0.271 Sum_probs=73.4
Q ss_pred CchHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 11 DEPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 11 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
++|..+.++..+|.++...|++++|+.++++++... |....++..+|.++...|++++|+..+++++.+
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~--------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~--- 72 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD--------PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--- 72 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc---
Confidence 345677889999999999999999999999999862 233567889999999999999999999999987
Q ss_pred hcCCCCcchHhhhHhHHHHHHHhC
Q 016124 91 NRGTESADLVLPLFSLGSLFIKEG 114 (394)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~~g 114 (394)
.|....++..+|.++...|
T Consensus 73 -----~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 -----DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp -----CTTCHHHHHHHHHHHHHHC
T ss_pred -----CCCCHHHHHHHHHHHHhcC
Confidence 4555678888998887664
No 198
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.99 E-value=6.1e-09 Score=68.18 Aligned_cols=86 Identities=19% Similarity=0.301 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhh
Q 016124 55 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVY 134 (394)
Q Consensus 55 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 134 (394)
+....++..+|.++...|++++|+..+++++.. .|....++..+|.++...|++++|+.++++++.+
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~--------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----- 72 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL--------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----- 72 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----
Confidence 456678899999999999999999999999986 3455678999999999999999999999999986
Q ss_pred CCCchHHHHHHHHHHHHHHHCC
Q 016124 135 GENDGRVGMAMCSLAHAKCANG 156 (394)
Q Consensus 135 ~~~~~~~~~~~~~la~~~~~~g 156 (394)
.|....++.++|.++...|
T Consensus 73 ---~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 ---DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp ---CTTCHHHHHHHHHHHHHHC
T ss_pred ---CCCCHHHHHHHHHHHHhcC
Confidence 3344567788888877654
No 199
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.96 E-value=5.7e-10 Score=76.33 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=80.9
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 179 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 179 (394)
+..+..+|.++...|++++|+..|++++.+ .|....++.++|.++...|++++|+..+++++++... .
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~----~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTST----A 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSS----T
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC----c
Confidence 467889999999999999999999999987 3344567899999999999999999999999986432 1
Q ss_pred CchHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 016124 180 LDDSIMENMRIDLAELLHIVGRGQEGRELLE 210 (394)
Q Consensus 180 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 210 (394)
++......++..+|.++...|+++.|+..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 72 EHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 2334456778899999999998888776554
No 200
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.96 E-value=1.2e-09 Score=74.63 Aligned_cols=93 Identities=12% Similarity=0.018 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCC
Q 016124 186 ENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPD 265 (394)
Q Consensus 186 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 265 (394)
...+..+|.++...|++++|+..+++++.+ .|....++.++|.++...|++++|+..+++++.+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-------- 67 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA--------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY-------- 67 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS--------
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------
Confidence 345688999999999999999999999986 3555778999999999999999999999999873
Q ss_pred CCcc------hHHHHHHHHHHHhhcChHHHHHHHH
Q 016124 266 DQSI------SFPMLHLGITLYHLNRDKEAEKLVL 294 (394)
Q Consensus 266 ~~~~------~~~~~~la~~~~~~g~~~~A~~~~~ 294 (394)
.|.. ..++..+|.++...|+++.|+..++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 3333 6778899999999998888766554
No 201
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.91 E-value=2.1e-08 Score=68.88 Aligned_cols=84 Identities=17% Similarity=0.206 Sum_probs=71.8
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH
Q 016124 75 KKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCA 154 (394)
Q Consensus 75 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~ 154 (394)
++|+..|++++.. .|....++..+|.++...|++++|+..|++++.. .|....++..+|.++..
T Consensus 2 ~~a~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~ 65 (115)
T 2kat_A 2 QAITERLEAMLAQ--------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQG 65 (115)
T ss_dssp CCHHHHHHHHHTT--------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHH
Confidence 3577788887764 4566789999999999999999999999999987 34445688999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 016124 155 NGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 155 ~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|++++|+..+++++++...
T Consensus 66 ~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 66 QGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccc
Confidence 99999999999999998654
No 202
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.88 E-value=4.7e-08 Score=67.15 Aligned_cols=84 Identities=25% Similarity=0.196 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHh
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH 282 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~ 282 (394)
++|+..+++++.. .|....++..+|.++...|++++|+..+++++.+ .|....++..+|.++..
T Consensus 2 ~~a~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~ 65 (115)
T 2kat_A 2 QAITERLEAMLAQ--------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDF--------DPTYSVAWKWLGKTLQG 65 (115)
T ss_dssp CCHHHHHHHHHTT--------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHH
Confidence 3567777777753 4566788999999999999999999999999984 45667889999999999
Q ss_pred hcChHHHHHHHHHHHHHHHH
Q 016124 283 LNRDKEAEKLVLEALYIREI 302 (394)
Q Consensus 283 ~g~~~~A~~~~~~a~~~~~~ 302 (394)
.|++++|+..|++++.+...
T Consensus 66 ~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 66 QGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhccc
Confidence 99999999999999987643
No 203
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.87 E-value=4.6e-08 Score=65.17 Aligned_cols=71 Identities=18% Similarity=0.144 Sum_probs=62.4
Q ss_pred CccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHH
Q 016124 224 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREI 302 (394)
Q Consensus 224 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 302 (394)
+|....++..+|.++...|++++|+..|++++++ .|....++..+|.++...|++++|+..+++++++...
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 4566778999999999999999999999999985 4566778999999999999999999999999998754
No 204
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.86 E-value=4.2e-08 Score=65.38 Aligned_cols=71 Identities=14% Similarity=0.250 Sum_probs=61.8
Q ss_pred CcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 96 SADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
+|....+++.+|.++...|++++|+..|++++++ .|....++..+|.+|...|++++|+..+++++++...
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVET--------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 4666788999999999999999999999999987 3444558999999999999999999999999998654
No 205
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=9.3e-08 Score=67.94 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Q 016124 156 GNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLA 235 (394)
Q Consensus 156 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 235 (394)
+++++|+.+|+++.+. + ++. +. +|.+|...+..++|+.+|+++.+. ....+.+++|
T Consensus 9 ~d~~~A~~~~~~aa~~-------g-~~~----a~--lg~~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg 64 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-------N-EMF----GC--LSLVSNSQINKQKLFQYLSKACEL----------NSGNGCRFLG 64 (138)
T ss_dssp HHHHHHHHHHHHHHHT-------T-CTT----HH--HHHHTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-------C-CHh----hh--HHHHHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHH
Confidence 4688999999999874 1 111 11 899999999999999999999763 2356889999
Q ss_pred HHHHH----cccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHh----hcChHHHHHHHHHHHH
Q 016124 236 ASYSR----SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYH----LNRDKEAEKLVLEALY 298 (394)
Q Consensus 236 ~~~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~----~g~~~~A~~~~~~a~~ 298 (394)
.+|.. .+++++|+.+|+++.+. ....+..+||.+|.. .+++++|+.+|+++.+
T Consensus 65 ~~y~~G~g~~~d~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 125 (138)
T 1klx_A 65 DFYENGKYVKKDLRKAAQYYSKACGL----------NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACR 125 (138)
T ss_dssp HHHHHCSSSCCCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHH
Confidence 99998 89999999999999872 345788999999999 8999999999999987
No 206
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.85 E-value=4.2e-08 Score=69.73 Aligned_cols=110 Identities=9% Similarity=-0.011 Sum_probs=90.5
Q ss_pred CChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHH
Q 016124 200 GRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGIT 279 (394)
Q Consensus 200 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~ 279 (394)
+++++|+.+|+++.+. .++.. . +|.+|...+..++|+.+|+++.+. ....+..+||.+
T Consensus 9 ~d~~~A~~~~~~aa~~-------g~~~a---~--lg~~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~ 66 (138)
T 1klx_A 9 KDLKKAIQYYVKACEL-------NEMFG---C--LSLVSNSQINKQKLFQYLSKACEL----------NSGNGCRFLGDF 66 (138)
T ss_dssp HHHHHHHHHHHHHHHT-------TCTTH---H--HHHHTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHcC-------CCHhh---h--HHHHHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHHHH
Confidence 3678899999998764 23332 2 999999999999999999999872 345788999999
Q ss_pred HHh----hcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH----hCCCchHHHHHHHHHHHH
Q 016124 280 LYH----LNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR----LGEDDTKLLELLKRVLRI 342 (394)
Q Consensus 280 ~~~----~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~g~~~~~A~~~~~~al~~ 342 (394)
|.. .+++++|+.+|+++.+. .+ ..+..+||.+|.. .++++ +|+.+|+++.+.
T Consensus 67 y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~~a~~~Lg~~y~~G~g~~~d~~-~A~~~~~~Aa~~ 126 (138)
T 1klx_A 67 YENGKYVKKDLRKAAQYYSKACGL-------ND---QDGCLILGYKQYAGKGVVKNEK-QAVKTFEKACRL 126 (138)
T ss_dssp HHHCSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHH-HHHHHHHHHHHT
T ss_pred HHcCCCCCccHHHHHHHHHHHHcC-------CC---HHHHHHHHHHHHCCCCCCcCHH-HHHHHHHHHHHC
Confidence 998 89999999999999762 22 4578999999999 78888 999999999873
No 207
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.78 E-value=5.9e-07 Score=78.50 Aligned_cols=166 Identities=14% Similarity=0.037 Sum_probs=122.7
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHc---------ccHHHHHHHHHHHHHHHHh
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRS---------KNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~---------g~~~~A~~~~~~a~~~~~~ 260 (394)
..+-..+.+.|+.++|+.+|++.... | -.|+ ..+++.+-.++... +..++|.++|++...
T Consensus 30 ~~~id~c~k~G~~~~A~~lf~~M~~~-----G-v~pd-~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~---- 98 (501)
T 4g26_A 30 KQKLDMCSKKGDVLEALRLYDEARRN-----G-VQLS-QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIV---- 98 (501)
T ss_dssp HHHHHHTTTSCCHHHHHHHHHHHHHH-----T-CCCC-HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHc-----C-CCCC-HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHH----
Confidence 45567888999999999999987653 1 1233 34566666666543 346788888887655
Q ss_pred hcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 261 TVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 261 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
........++..+...|...|++++|..++++.... .......++..+...+.+.|+.+ +|.++|++..
T Consensus 99 ---~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-------g~~Pd~~tyn~lI~~~~~~g~~~-~A~~l~~~M~ 167 (501)
T 4g26_A 99 ---DKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAF-------GIQPRLRSYGPALFGFCRKGDAD-KAYEVDAHMV 167 (501)
T ss_dssp ---TTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT-------TCCCCHHHHHHHHHHHHHTTCHH-HHHHHHHHHH
T ss_pred ---hCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc-------CCCCccceehHHHHHHHHCCCHH-HHHHHHHHHH
Confidence 222334567889999999999999999999887542 11223457888999999999999 9999998876
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHH
Q 016124 341 RIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNL 384 (394)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 384 (394)
+. -. .|+ ..++..|...+.+.|+.++|.+++++..+.
T Consensus 168 ~~---G~---~Pd-~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 168 ES---EV---VPE-EPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HT---TC---CCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hc---CC---CCC-HHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 52 11 222 457888999999999999999999987654
No 208
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=98.72 E-value=1.9e-06 Score=75.32 Aligned_cols=167 Identities=9% Similarity=0.013 Sum_probs=122.9
Q ss_pred hhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHHHH
Q 016124 102 PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANG---------NAEEAVELYKKALRVI 172 (394)
Q Consensus 102 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g---------~~~~A~~~~~~a~~~~ 172 (394)
.+..+-..+.+.|++++|..+|+++.+. | -.|+ ..+++.+-.++...+ ..++|..+|++....
T Consensus 28 ~l~~~id~c~k~G~~~~A~~lf~~M~~~-----G-v~pd-~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~- 99 (501)
T 4g26_A 28 LLKQKLDMCSKKGDVLEALRLYDEARRN-----G-VQLS-QYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD- 99 (501)
T ss_dssp HHHHHHHHTTTSCCHHHHHHHHHHHHHH-----T-CCCC-HHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHc-----C-CCCC-HhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh-
Confidence 3455567888999999999999998764 1 1222 345666666665544 368888888876652
Q ss_pred HhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLR 252 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 252 (394)
...|+. .++..+...|.+.|++++|..++++.... | -.| ...+++.+...|.+.|+.++|.++|+
T Consensus 100 ----G~~Pd~----~tyn~lI~~~~~~g~~~~A~~l~~~M~~~-----g-~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 100 ----KVVPNE----ATFTNGARLAVAKDDPEMAFDMVKQMKAF-----G-IQP-RLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp ----TCCCCH----HHHHHHHHHHHHHTCHHHHHHHHHHHHHT-----T-CCC-CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ----CCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHHc-----C-CCC-ccceehHHHHHHHHCCCHHHHHHHHH
Confidence 123332 35677889999999999999999886542 1 223 34578889999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 253 ICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 253 ~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
+..+ ........++..|-..+.+.|+.++|.+++++..+
T Consensus 165 ~M~~-------~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 165 HMVE-------SEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHH-------TTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHh-------cCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 8876 12233456788999999999999999999988654
No 209
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.70 E-value=8.7e-06 Score=67.73 Aligned_cols=212 Identities=12% Similarity=0.077 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHH-hCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIK-EGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
.+...+|..|...|++++-..++.......... .....+.....+-..+.. -+..+.-.+.+..+++.++. +
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~----~ 92 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSI---SKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQ----E 92 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGS---CHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH----H
Confidence 467789999999999999888887765543221 122233344444444433 35556667778888877664 2
Q ss_pred chHHHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 138 DGRVGM--AMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 138 ~~~~~~--~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
...... .-..+|..|...|+|.+|...+.+..+-+++. ++...+..++.....+|...+++.++...+.++...
T Consensus 93 ~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~----dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~ 168 (394)
T 3txn_A 93 KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL----DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTT 168 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS----SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc----ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 223323 34589999999999999999999999988763 456778888899999999999999999999999888
Q ss_pred HHHhhCCCCcc-HHHHHHHHHHHHH-HcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcCh
Q 016124 216 TEKYKGKEHPS-FVTHLLNLAASYS-RSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRD 286 (394)
Q Consensus 216 ~~~~~~~~~~~-~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 286 (394)
..... .+|. .+.....-|.++. ..++|.+|..+|-++...+... ..|....+...++.+-...++.
T Consensus 169 ~~ai~--~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~---~~~~~~~~lkYlvL~aLl~~~r 236 (394)
T 3txn_A 169 ANAIY--CPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSV---DSVKALTSLKYMLLCKIMLGQS 236 (394)
T ss_dssp HHHSC--CCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHTTCG
T ss_pred hccCC--CCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccccc---ccHHHHHHHHHHHHHHHHcCCH
Confidence 76542 3443 3445556678888 8999999999999987655432 2233334444455555555553
No 210
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.60 E-value=2e-07 Score=61.97 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=67.5
Q ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHh-hhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchH
Q 016124 62 LGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVL-PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGR 140 (394)
Q Consensus 62 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 140 (394)
...|..+...|++++|+..++++++. .|.... ++..+|.++...|++++|+..|++++.+ .++++.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~ 70 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQT--------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPA 70 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH--------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHH
Confidence 45788899999999999999999886 455566 8999999999999999999999999987 233332
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 141 VGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 141 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
++.+ +.+.+++..|+++.....
T Consensus 71 ---~~~~--------~~~~~a~~~~~~~~~~~p 92 (99)
T 2kc7_A 71 ---LQAR--------KMVMDILNFYNKDMYNQL 92 (99)
T ss_dssp ---HHHH--------HHHHHHHHHHCCTTHHHH
T ss_pred ---HHHH--------HHHHHHHHHHHHHhccCc
Confidence 2211 556777777777766544
No 211
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=98.60 E-value=6e-05 Score=62.76 Aligned_cols=212 Identities=10% Similarity=0.016 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHh-hchhHHHHHHHHHHHHHHHhcCCC
Q 016124 17 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSI-GRAKKAVEIYHRVITILELNRGTE 95 (394)
Q Consensus 17 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~ 95 (394)
.+...+|..|...|++++-..++......+... .....+.....+-..+... +..+.-++....+++..+. +
T Consensus 20 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~----~ 92 (394)
T 3txn_A 20 QGILQQGELYKQEGKAKELADLIKVTRPFLSSI---SKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQ----E 92 (394)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGS---CHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH----T
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh---chHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH----H
Confidence 567899999999999999988887765544322 2234455555555555432 4445556666777666543 1
Q ss_pred CcchHh--hhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 96 SADLVL--PLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 96 ~~~~~~--~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
...... .-..+|..|...|+|.+|...+.+....+.+. .+......++.....+|...+++.++...+.++.....
T Consensus 93 ~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~--dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ 170 (394)
T 3txn_A 93 KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKL--DDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTAN 170 (394)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS--SCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcc--ccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhc
Confidence 222222 34489999999999999999999999887663 34567788888899999999999999999999988875
Q ss_pred hcccCCCchHHHHHHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHccc
Q 016124 174 DSNYMSLDDSIMENMRIDLAELLH-IVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKN 243 (394)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 243 (394)
.. .+++...+.....-|..+. ..++|.+|..+|-++..-+... ..|....+...++.+-...++
T Consensus 171 ai---~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~---~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 171 AI---YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSV---DSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HS---CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTT---CHHHHHHHHHHHHHHHHHTTC
T ss_pred cC---CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhccccc---ccHHHHHHHHHHHHHHHHcCC
Confidence 42 2566667777777888888 8999999999999987554321 223333333334444444444
No 212
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.57 E-value=0.0002 Score=62.67 Aligned_cols=213 Identities=10% Similarity=0.049 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHH
Q 016124 117 VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELL 196 (394)
Q Consensus 117 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~ 196 (394)
+.....|++++... |.....+...+..+...|+.++|...|++++.. .. ...+. ...+..
T Consensus 196 ~Rv~~~ye~al~~~--------p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~-------~~~l~---~~y~~~- 255 (493)
T 2uy1_A 196 SRMHFIHNYILDSF--------YYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SD-------GMFLS---LYYGLV- 255 (493)
T ss_dssp HHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CC-------SSHHH---HHHHHH-
T ss_pred HHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CC-------cHHHH---HHHHhh-
Confidence 45667888887652 223556777888889999999999999999986 32 11111 111111
Q ss_pred HHcCChHHHHHHHHHHHHHH---HHhhC--CCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchH
Q 016124 197 HIVGRGQEGRELLEECLLIT---EKYKG--KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISF 271 (394)
Q Consensus 197 ~~~g~~~~A~~~~~~a~~~~---~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 271 (394)
.+.++. ++...... ....+ ...+....++...+......++.+.|...|+++ . . + +....
T Consensus 256 ---~e~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~----~--~--~~~~~ 320 (493)
T 2uy1_A 256 ---MDEEAV---YGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-G----N--E--GVGPH 320 (493)
T ss_dssp ---TTCTHH---HHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-T----T--S--CCCHH
T ss_pred ---cchhHH---HHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-h----C--C--CCChH
Confidence 111121 22222111 00000 011223355667777777888999999999988 3 1 1 12344
Q ss_pred HHHHHHHHHHhhc-ChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCC
Q 016124 272 PMLHLGITLYHLN-RDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSE 350 (394)
Q Consensus 272 ~~~~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~ 350 (394)
.+...|.+-...+ +.+.|...|+.+++.. ++.|.. +...+......|+.+ .|...|+++. .
T Consensus 321 v~i~~A~lE~~~~~d~~~ar~ife~al~~~-----~~~~~~---~~~yid~e~~~~~~~-~aR~l~er~~---------k 382 (493)
T 2uy1_A 321 VFIYCAFIEYYATGSRATPYNIFSSGLLKH-----PDSTLL---KEEFFLFLLRIGDEE-NARALFKRLE---------K 382 (493)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHHC-----TTCHHH---HHHHHHHHHHHTCHH-HHHHHHHHSC---------C
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHHC-----CCCHHH---HHHHHHHHHHcCCHH-HHHHHHHHHH---------H
Confidence 5555566666666 6999999999998853 444543 444566777888888 8888888762 1
Q ss_pred CHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Q 016124 351 SEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 351 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 385 (394)
+ ...+......-...|+.+.+...+++++...
T Consensus 383 ~---~~lw~~~~~fE~~~G~~~~~r~v~~~~~~~~ 414 (493)
T 2uy1_A 383 T---SRMWDSMIEYEFMVGSMELFRELVDQKMDAI 414 (493)
T ss_dssp B---HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 2 3445555566667799888888888888643
No 213
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.55 E-value=2.4e-07 Score=61.50 Aligned_cols=87 Identities=11% Similarity=0.096 Sum_probs=67.7
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHH-HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcc
Q 016124 20 LHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVT-SLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESAD 98 (394)
Q Consensus 20 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~-~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~ 98 (394)
+..|..+...|++++|+..|++++... |.... ++..+|.++...|++++|+..|++++.+ .|.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--------~p~ 67 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTE--------PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL--------NPD 67 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHC--------SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCC
Confidence 567899999999999999999999862 23345 7899999999999999999999999987 233
Q ss_pred hHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHH
Q 016124 99 LVLPLFSLGSLFIKEGKAVDAESVFSRILKIY 130 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 130 (394)
...++.. +.+.++...|+++....
T Consensus 68 ~~~~~~~--------~~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 68 SPALQAR--------KMVMDILNFYNKDMYNQ 91 (99)
T ss_dssp STHHHHH--------HHHHHHHHHHCCTTHHH
T ss_pred cHHHHHH--------HHHHHHHHHHHHHhccC
Confidence 3333321 56777788877776653
No 214
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.54 E-value=1e-06 Score=58.94 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCC
Q 016124 17 AILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTES 96 (394)
Q Consensus 17 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 96 (394)
.-++.+|..++..|+|..|+.+|++|++....... ..+....++..+|.++...|++++|+.++++++.+ .
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--------~ 76 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--------D 76 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--------C
Confidence 44689999999999999999999999987643211 12345678899999999999999999999999987 3
Q ss_pred cchHhhhHhHH
Q 016124 97 ADLVLPLFSLG 107 (394)
Q Consensus 97 ~~~~~~~~~l~ 107 (394)
|....+..+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 44444555554
No 215
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.47 E-value=2.2e-05 Score=64.29 Aligned_cols=133 Identities=12% Similarity=0.046 Sum_probs=92.5
Q ss_pred HHHHHHHHhh---hchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhch----hHHHHHHHHHHHHHHHhc
Q 016124 20 LHMGSMYSTL---ENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRA----KKAVEIYHRVITILELNR 92 (394)
Q Consensus 20 ~~l~~~~~~~---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----~~A~~~~~~al~~~~~~~ 92 (394)
+..|..+... .+..+|+.+|++++++ +|..+.++..++.++.....+ ........+++.....
T Consensus 200 ~Lra~~~l~~~~~~~~~~A~~l~e~Al~l--------DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a-- 269 (372)
T 3ly7_A 200 FYQAHDYLLHGDDKSLNRASELLGEIVQS--------SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVT-- 269 (372)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHh--
Confidence 4455555544 4568999999999987 355555666666665432211 1222223333332211
Q ss_pred CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 93 GTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 93 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
....+..+.++..++..+...|++++|+..+++++.+ . +. ..++..+|.++...|++++|++.|.+|+.+
T Consensus 270 ~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L-----n---~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 270 LPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDL-----E---MS-WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp CGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----C---CC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc-----C---CC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 1234666778888898899999999999999999998 1 22 346788999999999999999999999996
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.44 E-value=4.9e-06 Score=55.58 Aligned_cols=82 Identities=13% Similarity=0.041 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 222 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 222 (394)
.-++.+|..+...|+|..|+..+++|++....... .......++..+|.++..+|++++|+.++++++.+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~---~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l------- 75 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI---STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL------- 75 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC---CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-------
Confidence 45678999999999999999999999998754311 12233467789999999999999999999999886
Q ss_pred CCccHHHHHHHHH
Q 016124 223 EHPSFVTHLLNLA 235 (394)
Q Consensus 223 ~~~~~~~~~~~la 235 (394)
.|....+..+++
T Consensus 76 -~P~~~~~~~n~~ 87 (104)
T 2v5f_A 76 -DPEHQRANGNLK 87 (104)
T ss_dssp -CTTCHHHHHHHH
T ss_pred -CCCCHHHHhhHH
Confidence 344444555554
No 217
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.26 E-value=4e-05 Score=62.74 Aligned_cols=131 Identities=8% Similarity=0.043 Sum_probs=91.4
Q ss_pred HHHHHHHh---hchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcH----HHHHHHHHHHHHHHHHhhCC
Q 016124 64 MAKVLGSI---GRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA----VDAESVFSRILKIYTKVYGE 136 (394)
Q Consensus 64 l~~~~~~~---g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~----~~A~~~~~~al~~~~~~~~~ 136 (394)
.|..+... ..+.+|+.+|++|+++ +|..+.++..++.+|.....+ .....-..+++..... ..
T Consensus 202 ra~~~l~~~~~~~~~~A~~l~e~Al~l--------DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a--~~ 271 (372)
T 3ly7_A 202 QAHDYLLHGDDKSLNRASELLGEIVQS--------SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVT--LP 271 (372)
T ss_dssp HHHHHHHHCSHHHHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT--CG
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHh--cc
Confidence 34444443 4568999999999997 677777887777777532111 1222223333332211 12
Q ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 137 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
..+..+.++..++..+...|++++|+..+++++.+. ++ ...+..+|.++...|++++|++.|.+|+.+
T Consensus 272 ~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln-------~s----~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 272 ELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE-------MS----WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp GGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-------CC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC-------CC----HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 234455677778888888899999999999999972 22 335577899999999999999999999987
No 218
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.26 E-value=0.00073 Score=53.10 Aligned_cols=84 Identities=14% Similarity=0.082 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHHHHHhhCCCCcc-HHHHH
Q 016124 158 AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIV-----GRGQEGRELLEECLLITEKYKGKEHPS-FVTHL 231 (394)
Q Consensus 158 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-----g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~ 231 (394)
..+|...+++++++.. + ..-..++..+|.+|... |+.++|..+|++++++ +|. ...++
T Consensus 179 l~~A~a~lerAleLDP-------~-~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~L--------nP~~~id~~ 242 (301)
T 3u64_A 179 VHAAVMMLERACDLWP-------S-YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRY--------CSAHDPDHH 242 (301)
T ss_dssp HHHHHHHHHHHHHHCT-------T-HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHH--------CCTTCSHHH
T ss_pred HHHHHHHHHHHHHhCC-------C-cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHh--------CCCCCchHH
Confidence 4678888888888632 2 22356788999999995 9999999999999997 343 36678
Q ss_pred HHHHHHHHH-cccHHHHHHHHHHHHHH
Q 016124 232 LNLAASYSR-SKNFVEAERLLRICLDI 257 (394)
Q Consensus 232 ~~la~~~~~-~g~~~~A~~~~~~a~~~ 257 (394)
...|..+.. .|++++|..++++++..
T Consensus 243 v~YA~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 243 ITYADALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHHHHHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHcC
Confidence 889999888 49999999999999983
No 219
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.24 E-value=5.2e-05 Score=59.48 Aligned_cols=101 Identities=16% Similarity=0.092 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHH-----------hhchhHHHHHHHHHHHHHHHhcCCCCcc--hHhhhHhHHHHHHHh-----CcHH
Q 016124 56 LLVTSLLGMAKVLGS-----------IGRAKKAVEIYHRVITILELNRGTESAD--LVLPLFSLGSLFIKE-----GKAV 117 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~-----------~g~~~~A~~~~~~al~~~~~~~~~~~~~--~~~~~~~l~~~~~~~-----g~~~ 117 (394)
..+..++..|.+... .+....|...+++++++ +|. ...++..+|.+|... |+.+
T Consensus 150 ~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL--------DP~~~~GsA~~~LG~lY~~vPp~~gGd~e 221 (301)
T 3u64_A 150 VDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL--------WPSYQEGAVWNVLTKFYAAAPESFGGGME 221 (301)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH--------CTTHHHHHHHHHHHHHHHHSCTTTTCCHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh--------CCCcccCHHHHHHHHHHHhCCCccCCCHH
Confidence 345555665555432 12456777888888887 344 567999999999995 9999
Q ss_pred HHHHHHHHHHHHHHHhhCCCchH-HHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHH
Q 016124 118 DAESVFSRILKIYTKVYGENDGR-VGMAMCSLAHAKCA-NGNAEEAVELYKKALRVI 172 (394)
Q Consensus 118 ~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 172 (394)
+|..+|++++++ +|. ...++...|..+.. .|++++|..++++++..-
T Consensus 222 kA~~~ferAL~L--------nP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~ 270 (301)
T 3u64_A 222 KAHTAFEHLTRY--------CSAHDPDHHITYADALCIPLNNRAGFDEALDRALAID 270 (301)
T ss_dssp HHHHHHHHHHHH--------CCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHh--------CCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCC
Confidence 999999999998 332 24567788888887 599999999999999853
No 220
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.22 E-value=0.00012 Score=51.81 Aligned_cols=128 Identities=15% Similarity=0.035 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 222 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 222 (394)
.++..-...+...|.|+.|+.....++.+..... ..-.+.....++..+|..++..|+|..|...|++++...+.....
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~-~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~ 99 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNP-ELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKT 99 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCc-ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455666778899999999999999988875431 111355667788999999999999999999999999887632211
Q ss_pred -----------------CCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHH
Q 016124 223 -----------------EHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITL 280 (394)
Q Consensus 223 -----------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~ 280 (394)
+.+....+.+.++.||...+++++|+..++.. +....+...-..||.+|
T Consensus 100 ~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I---------p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 100 SKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI---------PSRQRTPKINMLLANLY 165 (167)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS---------CGGGCCHHHHHHHHHHC
T ss_pred CCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC---------CchhcCHHHHHHHHHHh
Confidence 11233467889999999999999999987643 12233445555666654
No 221
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.21 E-value=1.8e-05 Score=51.31 Aligned_cols=67 Identities=16% Similarity=0.015 Sum_probs=58.3
Q ss_pred ccHHHHHHHHHHHHHHccc---HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 225 PSFVTHLLNLAASYSRSKN---FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g~---~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
|.....+..+|.++...++ .++|..++++++.+ +|....++..+|..++..|++++|+.+++++++.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4556778888998876665 79999999999994 6788899999999999999999999999998874
No 222
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.21 E-value=1.6e-05 Score=51.57 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=58.8
Q ss_pred CcchHhhhHhHHHHHHHhCc---HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 96 SADLVLPLFSLGSLFIKEGK---AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.|..+..+..+|.+++..++ .++|...+++++.+ +|....++..+|..++..|+|++|+.+++++++.
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 35566788889999987766 79999999999997 5666778999999999999999999999999874
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.17 E-value=0.00011 Score=52.08 Aligned_cols=108 Identities=10% Similarity=-0.019 Sum_probs=83.2
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC--
Q 016124 18 ILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK-TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT-- 94 (394)
Q Consensus 18 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-- 94 (394)
++..-....+..|.|+.|+.....++.+.+..... .......++..+|..++..|+|..|...|++++...+.+...
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45566677888999999999999988886542221 123677889999999999999999999999999987643211
Q ss_pred ---------------CCcchHhhhHhHHHHHHHhCcHHHHHHHHHH
Q 016124 95 ---------------ESADLVLPLFSLGSLFIKEGKAVDAESVFSR 125 (394)
Q Consensus 95 ---------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 125 (394)
+.+....+.+.++.||...+++++|+..++.
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1122336778899999999999999988764
No 224
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.15 E-value=6.5e-05 Score=52.85 Aligned_cols=69 Identities=20% Similarity=0.117 Sum_probs=58.8
Q ss_pred ccHHHHHHHHHHHHHHcc---cHHHHHHHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 225 PSFVTHLLNLAASYSRSK---NFVEAERLLRICLDIMTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g---~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
+....+.+++|+++.+.+ +.++++.+++..++. +.| ....++++||..+.+.|+|++|..++++++++.
T Consensus 29 ~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie 101 (152)
T 1pc2_A 29 SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101 (152)
T ss_dssp CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 346678899999999988 677999999998873 224 557899999999999999999999999999975
No 225
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.12 E-value=0.00022 Score=50.19 Aligned_cols=69 Identities=10% Similarity=0.036 Sum_probs=59.0
Q ss_pred cchHhhhHhHHHHHHHhC---cHHHHHHHHHHHHHHHHHhhCCCch-HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 97 ADLVLPLFSLGSLFIKEG---KAVDAESVFSRILKIYTKVYGENDG-RVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g---~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
+....+.+++|+++.+.. +.++++.+++..++. +.| ....+++++|..+.+.|+|++|..++++++++-
T Consensus 29 ~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~-------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie 101 (152)
T 1pc2_A 29 SVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK-------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 101 (152)
T ss_dssp CCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH-------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 356788999999999988 677999999988875 235 567889999999999999999999999999963
No 226
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.08 E-value=0.0021 Score=56.22 Aligned_cols=215 Identities=12% Similarity=0.040 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHC
Q 016124 76 KAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCAN 155 (394)
Q Consensus 76 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 155 (394)
.....|++++.. .|.....+...+..+...|+.++|...|++++.. . .+... +...+.. ...
T Consensus 197 Rv~~~ye~al~~--------~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P-----~~~~l---~~~y~~~-~e~ 258 (493)
T 2uy1_A 197 RMHFIHNYILDS--------FYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-S-----DGMFL---SLYYGLV-MDE 258 (493)
T ss_dssp HHHHHHHHHHHH--------TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-C-----CSSHH---HHHHHHH-TTC
T ss_pred HHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-C-----CcHHH---HHHHHhh-cch
Confidence 345567776654 2344677888899999999999999999999986 2 22222 1111111 111
Q ss_pred CCHHHHHHHHHHHHHHHHhcc---cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHH
Q 016124 156 GNAEEAVELYKKALRVIKDSN---YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLL 232 (394)
Q Consensus 156 g~~~~A~~~~~~a~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 232 (394)
+ +. +++..+...... .....+.....++...+....+.+..+.|...|+++ .. .+.....+.
T Consensus 259 ~---~~---~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~--------~~~~~~v~i 323 (493)
T 2uy1_A 259 E---AV---YGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GN--------EGVGPHVFI 323 (493)
T ss_dssp T---HH---HHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TT--------SCCCHHHHH
T ss_pred h---HH---HHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hC--------CCCChHHHH
Confidence 1 11 222222110000 000012223456677777777888899999999988 21 112334555
Q ss_pred HHHHHHHHcc-cHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhH
Q 016124 233 NLAASYSRSK-NFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPV 311 (394)
Q Consensus 233 ~la~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 311 (394)
..|.+....+ +++.|..+|+.++..+ ++.| ..+...+......|+.+.|...|+++. .+
T Consensus 324 ~~A~lE~~~~~d~~~ar~ife~al~~~-----~~~~---~~~~~yid~e~~~~~~~~aR~l~er~~---------k~--- 383 (493)
T 2uy1_A 324 YCAFIEYYATGSRATPYNIFSSGLLKH-----PDST---LLKEEFFLFLLRIGDEENARALFKRLE---------KT--- 383 (493)
T ss_dssp HHHHHHHHHHCCSHHHHHHHHHHHHHC-----TTCH---HHHHHHHHHHHHHTCHHHHHHHHHHSC---------CB---
T ss_pred HHHHHHHHHCCChHHHHHHHHHHHHHC-----CCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHH---------HH---
Confidence 5666666666 6999999999999842 2223 344556777788999999999998862 12
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHH
Q 016124 312 GEALDCLVSIQTRLGEDDTKLLELLKRVLRIQE 344 (394)
Q Consensus 312 ~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~ 344 (394)
...+......-...|+.+ .+...++++++...
T Consensus 384 ~~lw~~~~~fE~~~G~~~-~~r~v~~~~~~~~~ 415 (493)
T 2uy1_A 384 SRMWDSMIEYEFMVGSME-LFRELVDQKMDAIK 415 (493)
T ss_dssp HHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHhc
Confidence 234555566666779887 88888999987554
No 227
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.76 E-value=0.012 Score=50.57 Aligned_cols=217 Identities=11% Similarity=0.005 Sum_probs=131.4
Q ss_pred hhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHH
Q 016124 29 LENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGS 108 (394)
Q Consensus 29 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 108 (394)
.|+++.|++-+....+..+ .+.+.+....++..+..++...|+++...+++.-.. +..+. .+...........
T Consensus 29 ~~~~~~a~e~ll~lEK~~r--~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Ls----kkr~q-lk~ai~~~V~~~~ 101 (445)
T 4b4t_P 29 QNDCNSALDQLLVLEKKTR--QASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLS----KKHGQ-LKLSIQYMIQKVM 101 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHH----TTTTT-SHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHH----HHhhh-hHHHHHHHHHHHH
Confidence 4788888876644333222 234455566778888899999999988766554221 11111 1111111111111
Q ss_pred HHH-HhCcHHHHHHHHHHHHHHHHHhhCCC---chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHH
Q 016124 109 LFI-KEGKAVDAESVFSRILKIYTKVYGEN---DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSI 184 (394)
Q Consensus 109 ~~~-~~g~~~~A~~~~~~al~~~~~~~~~~---~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 184 (394)
-+. .....+. ......+.......... ....+.....|+.++...|++.+|...+.....-.. ...+...
T Consensus 102 ~~l~~~~~~d~--~~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~----~~~~~~~ 175 (445)
T 4b4t_P 102 EYLKSSKSLDL--NTRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQVETY----GSMEMSE 175 (445)
T ss_dssp HHHHHHCTTHH--HHHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC----SSSCHHH
T ss_pred HHHhcCCchhH--HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH----hcccHHH
Confidence 111 1121111 11111221111111100 123456678899999999999999999998764332 2345566
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCcc-HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPS-FVTHLLNLAASYSRSKNFVEAERLLRICLDIMTK 260 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 260 (394)
....+....+++...+++.+|...++++........ .+|. ....+...|.++...++|.+|..+|..+......
T Consensus 176 kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~--~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 176 KIQFILEQMELSILKGDYSQATVLSRKILKKTFKNP--KYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccC--CcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcccc
Confidence 777888899999999999999999998765433322 2333 3556678899999999999999999998875443
No 228
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.024 Score=48.69 Aligned_cols=216 Identities=11% Similarity=-0.064 Sum_probs=129.2
Q ss_pred CcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHH
Q 016124 114 GKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLA 193 (394)
Q Consensus 114 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la 193 (394)
|+++.|++.+.......+ .+.+.+....++..+..++...|+++...+++.-... . .+........+...+-
T Consensus 30 ~~~~~a~e~ll~lEK~~r--~~~d~~s~~r~l~~iv~l~~~~~~~~~l~e~i~~Lsk---k---r~qlk~ai~~~V~~~~ 101 (445)
T 4b4t_P 30 NDCNSALDQLLVLEKKTR--QASDLASSKEVLAKIVDLLASRNKWDDLNEQLTLLSK---K---HGQLKLSIQYMIQKVM 101 (445)
T ss_dssp HHHHHHHHHHHHHHHHHS--SSCSTTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHT---T---TTTSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhh--hccchhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHH---H---hhhhHHHHHHHHHHHH
Confidence 567788776543333222 2345566677788889999999999887766543221 1 1222222222211111
Q ss_pred HHHHHcCChHHHHHHHHHHHHHHHHhh-CCCC--ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCC-CCcc
Q 016124 194 ELLHIVGRGQEGRELLEECLLITEKYK-GKEH--PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPD-DQSI 269 (394)
Q Consensus 194 ~~~~~~g~~~~A~~~~~~a~~~~~~~~-~~~~--~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~-~~~~ 269 (394)
.........+.. .....+....... |.-. ...+.....|+.++...|++.+|...+..... +..+.. ....
T Consensus 102 ~~l~~~~~~d~~--~~~~~i~~l~~vte~kiflE~erarl~~~La~i~e~~g~~~eA~~iL~~l~~---Et~~~~~~~~k 176 (445)
T 4b4t_P 102 EYLKSSKSLDLN--TRISVIETIRVVTENKIFVEVERARVTKDLVEIKKEEGKIDEAADILCELQV---ETYGSMEMSEK 176 (445)
T ss_dssp HHHHHHCTTHHH--HHHHHHHCCSSSSSCCCCCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---HHCSSSCHHHH
T ss_pred HHHhcCCchhHH--HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH---HHHhcccHHHH
Confidence 112222222221 1111221111111 1111 12455667899999999999999999987653 232222 2344
Q ss_pred hHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChh-HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHh
Q 016124 270 SFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLP-VGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQER 345 (394)
Q Consensus 270 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~ 345 (394)
...+.....++...+++.+|...+.++....... +.+|. ....+...|.++...+++. +|-.+|..+......
T Consensus 177 ve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~lk~~~~~~~~~~~~~e~~y~-~a~~~y~e~~~~~~~ 250 (445)
T 4b4t_P 177 IQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYESLKLEYYNLLVKISLHKREYL-EVAQYLQEIYQTDAI 250 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHhcccc
Confidence 5667778899999999999999999986544332 33443 3455677899999999999 999999988876544
No 229
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.42 E-value=0.0059 Score=42.41 Aligned_cols=110 Identities=10% Similarity=0.088 Sum_probs=79.3
Q ss_pred cCCCchHHHHHHHHHHHHHHhhhch------HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHH
Q 016124 8 LKDDEPLLDAILLHMGSMYSTLENY------EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIY 81 (394)
Q Consensus 8 l~~~~~~~~~~~~~l~~~~~~~g~~------~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 81 (394)
+.+.+|+....| .......|+. ++-++.|++|+...+..........+..+...+.. ...++.++|...|
T Consensus 8 ~~p~~yd~W~~y---l~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy 83 (161)
T 4h7y_A 8 MMANNPEDWLSL---LLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYF 83 (161)
T ss_dssp --CCSHHHHHHH---HHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHH
T ss_pred eCCCCHHHHHHH---HHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHH
Confidence 445566654443 4444455888 88888999888765332122233566666666655 5679999999999
Q ss_pred HHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 82 HRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 82 ~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
+.++.+ +...+.++...|..-.++|+...|...+.+++.+
T Consensus 84 ~~a~~~--------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 84 QMARAN--------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp HHHHHH--------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHH--------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 999986 2234888999999999999999999999999986
No 230
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.38 E-value=0.0013 Score=44.48 Aligned_cols=76 Identities=12% Similarity=-0.034 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCH-HHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHH
Q 016124 311 VGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESE-EVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYK 389 (394)
Q Consensus 311 ~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 389 (394)
...+.+++|+++.+..+.. ..++.+.+.+.++..+.| ...++++.||..+.+.|+|++|..+++..+++.|...
T Consensus 34 s~~~~F~yAw~Lv~S~~~~-----d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYND-----DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNN 108 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHH-----HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHcCCCHH-----HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 3467889999999877655 345666666666666656 7889999999999999999999999999999888665
Q ss_pred Hh
Q 016124 390 QK 391 (394)
Q Consensus 390 ~~ 391 (394)
|.
T Consensus 109 QA 110 (126)
T 1nzn_A 109 QA 110 (126)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 231
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.29 E-value=0.0021 Score=44.62 Aligned_cols=116 Identities=7% Similarity=-0.074 Sum_probs=80.9
Q ss_pred CcchHHHHHHHHHHHhhcCh------HHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 267 QSISFPMLHLGITLYHLNRD------KEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 267 ~~~~~~~~~la~~~~~~g~~------~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
|.....+..........|+. ++-++.|++|+..............+..+...+.. ...++.+ +|.+.|+.++
T Consensus 10 p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d-~aR~vy~~a~ 87 (161)
T 4h7y_A 10 ANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPD-DARDYFQMAR 87 (161)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGG-GCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHH-HHHHHHHHHH
Confidence 34445666666677777888 77777777777643211111223345555566644 5668888 9999999999
Q ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHhh
Q 016124 341 RIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQKV 392 (394)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 392 (394)
.+ - .. .+.++...|..-.++|+...|...+.+++.++++-.+++
T Consensus 88 ~~-h----Kk---FAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 88 AN-C----KK---FAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HH-C----TT---BHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HH-h----HH---HHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 86 1 12 277888889999999999999999999998876554443
No 232
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.24 E-value=0.0094 Score=40.33 Aligned_cols=68 Identities=18% Similarity=0.084 Sum_probs=54.0
Q ss_pred cHHHHHHHHHHHHHHcccHHH---HHHHHHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 226 SFVTHLLNLAASYSRSKNFVE---AERLLRICLDIMTKTVGPDDQ-SISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 226 ~~~~~~~~la~~~~~~g~~~~---A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
....+.+++|+++....+..+ ++.+++..+. .+.| ....+++.||..+.+.|+|++|..+++..+++.
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~-------~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~e 104 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP-------KGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 104 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT-------TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence 455788899999998887766 6666665443 3334 567789999999999999999999999999865
No 233
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.013 Score=50.19 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=88.3
Q ss_pred cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcc
Q 016124 97 ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSN 176 (394)
Q Consensus 97 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 176 (394)
.....++..+|..|...|++++|.+.|.++...+. ........+..+..++...+++..+..++.++..+...
T Consensus 128 ~e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~-----~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~-- 200 (429)
T 4b4t_R 128 LEQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAI-----STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK-- 200 (429)
T ss_dssp CCCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHT-----CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc--
Confidence 44567888999999999999999999999877542 23445677888888999999999999999999887654
Q ss_pred cCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 177 YMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 177 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
++++..........|.++...++|.+|...|-++...
T Consensus 201 --~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 201 --GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLAT 237 (429)
T ss_dssp --CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhcc
Confidence 3455555556667788888999999999999877643
No 234
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.076 Score=45.42 Aligned_cols=108 Identities=11% Similarity=0.075 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 58 VTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 58 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
..++..+|..|...|++++|.+.|.++..... ........+..+..++...+++..+..++.++....... ++
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~-----~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~--~d 203 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAI-----STGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG--GD 203 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHT-----CCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC--CC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC--CC
Confidence 34567899999999999999999999877542 234567788888999999999999999999998775542 23
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
...........|.++...++|.+|...|..+....
T Consensus 204 ~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 204 WERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp THHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 33334445566777888999999999998887654
No 235
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.68 E-value=0.043 Score=51.44 Aligned_cols=107 Identities=10% Similarity=-0.070 Sum_probs=81.0
Q ss_pred CccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHH
Q 016124 224 HPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIA 303 (394)
Q Consensus 224 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 303 (394)
......+++.+...|++.|+.++|..+|........+- -.| ...+|..|...|.+.|+.++|.++|++..+.
T Consensus 123 ~~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG---~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~---- 194 (1134)
T 3spa_A 123 LSGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR---KLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDA---- 194 (1134)
T ss_dssp CCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH---TTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT----
T ss_pred HHhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC---CCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc----
Confidence 44556678899999999999999999998765432222 123 3468899999999999999999999987552
Q ss_pred cCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Q 016124 304 FGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLR 341 (394)
Q Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~ 341 (394)
.-.| ...+|..+...+.+.|+..++|.+++++..+
T Consensus 195 --G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 195 --GLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp --TCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred --CCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 1223 3467888888999999864378888887764
No 236
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=96.63 E-value=0.041 Score=51.55 Aligned_cols=103 Identities=11% Similarity=-0.012 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCC
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP 264 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 264 (394)
...+++.+-..|.+.|+.++|..++.+......+-. .|+ ..+|+.|...|.+.|+.++|.++|++.... +
T Consensus 126 ~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~---~Pd-vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~------G 195 (1134)
T 3spa_A 126 QQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRK---LLT-LDMYNAVMLGWARQGAFKELVYVLFMVKDA------G 195 (1134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHT---TCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHT------T
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCC---CCC-HhHHHHHHHHHHhCCCHHHHHHHHHHHHHc------C
Confidence 345678899999999999999999987654433222 233 457899999999999999999999988761 2
Q ss_pred CCCcchHHHHHHHHHHHhhcCh-HHHHHHHHHHHH
Q 016124 265 DDQSISFPMLHLGITLYHLNRD-KEAEKLVLEALY 298 (394)
Q Consensus 265 ~~~~~~~~~~~la~~~~~~g~~-~~A~~~~~~a~~ 298 (394)
-.| ...+|..+-.++.+.|+. ++|.+++++..+
T Consensus 196 ~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 196 LTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQ 229 (1134)
T ss_dssp CCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Confidence 233 456788888899999985 688888887654
No 237
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.51 E-value=0.0025 Score=43.28 Aligned_cols=73 Identities=11% Similarity=-0.077 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhCCCch--HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHH
Q 016124 312 GEALDCLVSIQTRLGEDDT--KLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYK 389 (394)
Q Consensus 312 ~~~~~~l~~~~~~~g~~~~--~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 389 (394)
..+.+++|+++.+..+..+ +++.+++..+. .+.....+.++.||..+.+.|+|++|..+.+..+++.|...
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~-------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~ 112 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK-------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 112 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH-------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCH
Confidence 4678899999998876541 34444444433 23335688999999999999999999999999888877665
Q ss_pred Hh
Q 016124 390 QK 391 (394)
Q Consensus 390 ~~ 391 (394)
|.
T Consensus 113 QA 114 (134)
T 3o48_A 113 QV 114 (134)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 238
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.37 E-value=0.086 Score=49.42 Aligned_cols=47 Identities=13% Similarity=0.074 Sum_probs=34.1
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHH
Q 016124 68 LGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRIL 127 (394)
Q Consensus 68 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 127 (394)
....|++++|.+..+. ......+..+|..+...|+++.|+.+|.++-
T Consensus 662 ~l~~~~~~~A~~~~~~-------------~~~~~~W~~la~~al~~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTD-------------ESAEMKWRALGDASLQRFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHHHTCHHHHHHHHTT-------------CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhhcCCHHHHHHHHHh-------------hCcHhHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3456666666655321 1234678899999999999999999999863
No 239
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.36 E-value=0.006 Score=42.02 Aligned_cols=75 Identities=11% Similarity=-0.074 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHhCCCc--hHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Q 016124 310 PVGEALDCLVSIQTRLGEDD--TKLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLRMK 387 (394)
Q Consensus 310 ~~~~~~~~l~~~~~~~g~~~--~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 387 (394)
....+.+++|+++.+..+.. .+++.+++..+. .......+.++.||..+.+.|+|++|..+.+..+++.|.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~-------~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK-------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH-------HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 34567889999999888654 144444444443 222256788999999999999999999999998887776
Q ss_pred HHHh
Q 016124 388 YKQK 391 (394)
Q Consensus 388 ~~~~ 391 (394)
..|.
T Consensus 110 n~QA 113 (144)
T 1y8m_A 110 NKQV 113 (144)
T ss_dssp CHHH
T ss_pred cHHH
Confidence 5553
No 240
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.32 E-value=0.08 Score=49.63 Aligned_cols=75 Identities=21% Similarity=0.120 Sum_probs=52.1
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCc
Q 016124 146 CSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHP 225 (394)
Q Consensus 146 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 225 (394)
..+...+...|.+++|+...+. +.. ........|++++|.+..+. .
T Consensus 633 ~~~~~~l~~~~~~~~a~~~~~~--------------~~~-------~f~~~l~~~~~~~A~~~~~~-------------~ 678 (814)
T 3mkq_A 633 TKIARFLEGQEYYEEALNISPD--------------QDQ-------KFELALKVGQLTLARDLLTD-------------E 678 (814)
T ss_dssp HHHHHHHHHTTCHHHHHHHCCC--------------HHH-------HHHHHHHHTCHHHHHHHHTT-------------C
T ss_pred HHHHHHHHhCCChHHheecCCC--------------cch-------heehhhhcCCHHHHHHHHHh-------------h
Confidence 4556667788888887765422 111 12234678899988877532 1
Q ss_pred cHHHHHHHHHHHHHHcccHHHHHHHHHHH
Q 016124 226 SFVTHLLNLAASYSRSKNFVEAERLLRIC 254 (394)
Q Consensus 226 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a 254 (394)
.....+..+|..+...|+++.|+.+|.++
T Consensus 679 ~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 679 SAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 23357889999999999999999999876
No 241
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.91 E-value=0.26 Score=41.47 Aligned_cols=109 Identities=11% Similarity=0.019 Sum_probs=80.7
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCch--------------HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Q 016124 21 HMGSMYSTLENYEKSMLVYQRVINVLESRYGKTS--------------ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVIT 86 (394)
Q Consensus 21 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~--------------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 86 (394)
.-|......|+.+.|...+.+|+.++...+-.+. .....+...++..+...|++.+++..+.+++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3344445568899999999999987643211111 12334555677888899999999999998877
Q ss_pred HHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCC
Q 016124 87 ILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGEN 137 (394)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 137 (394)
. +|..-..+..+..++...|+..+|+..|++.......-+|-+
T Consensus 200 ~--------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~ 242 (388)
T 2ff4_A 200 E--------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGID 242 (388)
T ss_dssp H--------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCC
T ss_pred h--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 5 555666888899999999999999999999998877665544
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.82 E-value=0.25 Score=41.61 Aligned_cols=107 Identities=12% Similarity=-0.097 Sum_probs=77.6
Q ss_pred HHHHHcCChHHHHHHHHHHHHHHHHhhCCC---Cc-----------cHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Q 016124 194 ELLHIVGRGQEGRELLEECLLITEKYKGKE---HP-----------SFVTHLLNLAASYSRSKNFVEAERLLRICLDIMT 259 (394)
Q Consensus 194 ~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~---~~-----------~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 259 (394)
......|+.+.|...+.+++.++...+-++ .+ ....+...++..+...|++.+++..+...+..
T Consensus 123 ~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~-- 200 (388)
T 2ff4_A 123 VHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE-- 200 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--
Confidence 333456777788888888777653211000 01 11234456678888999999999999988773
Q ss_pred hhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCC
Q 016124 260 KTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDS 308 (394)
Q Consensus 260 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 308 (394)
+|..-..+..+..++...|+..+|+..|++......+.+|.+.
T Consensus 201 ------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P 243 (388)
T 2ff4_A 201 ------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDP 243 (388)
T ss_dssp ------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred ------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5666778889999999999999999999999998877777554
No 243
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.54 Score=43.06 Aligned_cols=124 Identities=9% Similarity=-0.045 Sum_probs=80.0
Q ss_pred HCCC-HHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHH--HHHc-CChHHHHHHHHHHHHHHHHhhCC---CC--
Q 016124 154 ANGN-AEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAEL--LHIV-GRGQEGRELLEECLLITEKYKGK---EH-- 224 (394)
Q Consensus 154 ~~g~-~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~--~~~~-g~~~~A~~~~~~a~~~~~~~~~~---~~-- 224 (394)
..++ ++.|+.++++..... +.... +...+.+ .... .+--+|+..+.++++........ .+
T Consensus 260 ~t~~~~~~a~~~le~L~~~~-------p~~~~----~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~ 328 (754)
T 4gns_B 260 ITPSLVDFTIDYLKGLTKKD-------PIHDI----YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDAD 328 (754)
T ss_dssp TCGGGHHHHHHHHHHHHHHC-------GGGHH----HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHH
T ss_pred ccccHHHHHHHHHHHHHhhC-------CchhH----HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 3455 577888888866532 21111 1111221 1122 23446778887777543222111 11
Q ss_pred -----ccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHH
Q 016124 225 -----PSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 296 (394)
Q Consensus 225 -----~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (394)
+.....+..-+..+...|+++-|+.+.++++.. .|....+|..|+.+|..+|+|+.|+-.+..+
T Consensus 329 ~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 329 SARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--------CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 112234555678888999999999999999985 5777889999999999999999999877665
No 244
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.62 E-value=0.33 Score=33.54 Aligned_cols=68 Identities=15% Similarity=0.082 Sum_probs=52.9
Q ss_pred cHHHHHHHHHHHHHHcccHH---HHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 226 SFVTHLLNLAASYSRSKNFV---EAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 226 ~~~~~~~~la~~~~~~g~~~---~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
....+.+++|+++....+.. +++.+++..+. ........+++.||..+.+.|+|++|..+.+..+++.
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~-------~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK-------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 107 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH-------HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 45667889999998877554 56677766655 1222567789999999999999999999999998854
No 245
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=95.46 E-value=0.36 Score=32.88 Aligned_cols=66 Identities=14% Similarity=0.074 Sum_probs=50.8
Q ss_pred hHhhhHhHHHHHHHhCcHH---HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 99 LVLPLFSLGSLFIKEGKAV---DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 99 ~~~~~~~l~~~~~~~g~~~---~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
...+.+++|+++.+..+.. +++.+++..+.. +.......++.+|..+.+.|+|++|..+.+..+++
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-------~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-------AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 107 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-------CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-------CcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 4577888999998887653 456666554432 23356778999999999999999999999999885
No 246
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.14 E-value=0.29 Score=42.24 Aligned_cols=145 Identities=11% Similarity=0.122 Sum_probs=62.5
Q ss_pred HHHhhhchHHHHHHHHHHH--HHHHHHh-CCchHHHHHHHHHHHHHHHHhhchhHHHHHH-------HHHHHHHHHh-cC
Q 016124 25 MYSTLENYEKSMLVYQRVI--NVLESRY-GKTSILLVTSLLGMAKVLGSIGRAKKAVEIY-------HRVITILELN-RG 93 (394)
Q Consensus 25 ~~~~~g~~~~A~~~~~~al--~~~~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~-------~~al~~~~~~-~~ 93 (394)
.+...+++++|..+-...+ +...... ..-++..+.+|+..+.++...|+........ ...+...+.. ..
T Consensus 145 ~L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr 224 (523)
T 4b4t_S 145 FLWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLK 224 (523)
T ss_dssp ----------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSC
T ss_pred HHhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcc
Confidence 4557788999888877665 2222110 0112345666777777777777665533221 1222222222 22
Q ss_pred CCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 94 TESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 94 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.+....+..++.+-..|...+.+++|..+..++. +... ...+...+..++.+|.++..+++|.+|.+++..|+..+
T Consensus 225 ~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~-~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rka 300 (523)
T 4b4t_S 225 HDNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHT-DVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKA 300 (523)
T ss_dssp SSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTT-TSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSC
T ss_pred cCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcc-cCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 3455567778888999999999999999998874 1110 01234567778899999999999999999999998754
No 247
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=94.98 E-value=1.2 Score=36.19 Aligned_cols=212 Identities=11% Similarity=0.073 Sum_probs=110.3
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHhhCCCC
Q 016124 146 CSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQ-EGRELLEECLLITEKYKGKEH 224 (394)
Q Consensus 146 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~~~~~~~~~ 224 (394)
..-+..+.+.|++..|.++..-.++.+.+.. ...+.. ....+..++.....-+ .=..+.++++....+. |...
T Consensus 59 ~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~-~~~~~~----~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~-g~~~ 132 (336)
T 3lpz_A 59 ASVSQTLLRSGQGGSGGDLAVLLVDTFRQAG-QRVDGA----SRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKF-GDYP 132 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CCCCHH----HHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHH-SSCT
T ss_pred HHHHHHHHHCCCcchHHHHHHHHHHHHHHcC-CCCCHH----HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhc-CCCC
Confidence 3334445555666666666555555554431 111211 2233444444433211 2245667777766653 3223
Q ss_pred ccHHHHHHHHHHHHHHcccHHHHHHHHH--------HHHHHHHhhcCCCCCcchHHHHH-HHHHHHhhcChHHHHHHHHH
Q 016124 225 PSFVTHLLNLAASYSRSKNFVEAERLLR--------ICLDIMTKTVGPDDQSISFPMLH-LGITLYHLNRDKEAEKLVLE 295 (394)
Q Consensus 225 ~~~~~~~~~la~~~~~~g~~~~A~~~~~--------~a~~~~~~~~~~~~~~~~~~~~~-la~~~~~~g~~~~A~~~~~~ 295 (394)
......+..+|..|.+.+++.+|..+|- ...++.-+......+.....+.. ....|...++...|...+..
T Consensus 133 ~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~ 212 (336)
T 3lpz_A 133 AGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRI 212 (336)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3344567789999999999999988862 11122222222222333333333 33456788999999988877
Q ss_pred HHHHHHHHcC-----------------CCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHHHH
Q 016124 296 ALYIREIAFG-----------------KDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVMLTL 358 (394)
Q Consensus 296 a~~~~~~~~~-----------------~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 358 (394)
..+...+... +..|.. . ...+...-...+ +...|+...+.+...+..+.|.....+
T Consensus 213 f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLL-N-Fl~lLllt~q~~-----~~~lF~~L~~~Y~~~l~rd~~~~~~~L 285 (336)
T 3lpz_A 213 FTSALVEDNKGLTVQNIGSQSAELRIFPSLPLL-N-FISMLLLSVQKG-----SPDLFRQLKSKYEANLNELNGIWDTAL 285 (336)
T ss_dssp HHHHHHHHCTTSCCEESCC--CCCEECTTCHHH-H-HHHHHHHHHHSC-----CHHHHHHHHHHTHHHHHTTTTTTHHHH
T ss_pred HHHHHhhcCCCccccccccCCcccccCCCCchH-H-HHHHHHHHHhcC-----CHHHHHHHHHHHHHHHHhcHHHHHHHH
Confidence 7665533211 112211 1 111222222333 234666666665555544432567788
Q ss_pred HHHHHHHHHhcC
Q 016124 359 KKVVSYLDKLGR 370 (394)
Q Consensus 359 ~~la~~~~~~g~ 370 (394)
..+|..|.....
T Consensus 286 ~~IG~~YFgi~~ 297 (336)
T 3lpz_A 286 ELIAEMYFGIQR 297 (336)
T ss_dssp HHHHHHHHCCCC
T ss_pred HHHHHHHcCCCC
Confidence 889999987643
No 248
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.95 E-value=0.52 Score=34.12 Aligned_cols=101 Identities=13% Similarity=0.056 Sum_probs=64.6
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHH
Q 016124 68 LGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCS 147 (394)
Q Consensus 68 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 147 (394)
....|+++.|.+..+.. +....|..||......|+++-|+.+|.++-+. ..
T Consensus 15 AL~lg~l~~A~e~a~~l-------------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~----------------~~ 65 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-------------NDSITWERLIQEALAQGNASLAEMIYQTQHSF----------------DK 65 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-------------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH----------------HH
T ss_pred HHhcCCHHHHHHHHHHh-------------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCH----------------HH
Confidence 34678888888775532 12457888999999999999999999876432 23
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 016124 148 LAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEEC 212 (394)
Q Consensus 148 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 212 (394)
+..+|...|+.+.-....+.+... .+. +.-..++...|+++++++++.+.
T Consensus 66 L~~Ly~~tg~~e~L~kla~iA~~~--------g~~-------n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 66 LSFLYLVTGDVNKLSKMQNIAQTR--------EDF-------GSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHT--------TCH-------HHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHC--------ccH-------HHHHHHHHHcCCHHHHHHHHHHC
Confidence 445566667765544333333221 111 22234566788888888887653
No 249
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=94.73 E-value=0.98 Score=34.07 Aligned_cols=60 Identities=8% Similarity=0.011 Sum_probs=50.3
Q ss_pred cccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHH-hhcChHHHHHHHHHHHHHH
Q 016124 241 SKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLY-HLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 241 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-~~g~~~~A~~~~~~a~~~~ 300 (394)
.|+.+.|...|+.|.++....+++.||.......+.+..|. -.+++++|..+.++|+++.
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 46678999999999999988788889988777777777665 4799999999999998764
No 250
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=94.51 E-value=0.28 Score=42.53 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 59 TSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
.++..+|.+......+..|..+|.+|..+ .|..+..++.||.+....|+.-+|.-+|.+++..
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~ 215 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAV 215 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSS
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHhc
Confidence 46677888888889999999999999987 6778899999999999999999999999998753
No 251
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.49 E-value=4 Score=40.02 Aligned_cols=208 Identities=11% Similarity=-0.026 Sum_probs=120.5
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC-------------CCchHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 016124 145 MCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM-------------SLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 211 (394)
Q Consensus 145 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~-------------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 211 (394)
.+.+|.++...|++++|..+|+++-.-....... .+........|..+..++...|.++.+++..+.
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~l 924 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4779999999999999999998863221110000 000111223466778889999999999999999
Q ss_pred HHHHHHHhhCCCCccH-HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHH
Q 016124 212 CLLITEKYKGKEHPSF-VTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAE 290 (394)
Q Consensus 212 a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 290 (394)
|++.. +.+++.. ...+.++=..+...|+|++|...+...-. ......++..|....+..|+.+.=.
T Consensus 925 Ai~~~----~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd---------~~~r~~cLr~LV~~lce~~~~~~L~ 991 (1139)
T 4fhn_B 925 ADASK----ETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLST---------TPLKKSCLLDFVNQLTKQGKINQLL 991 (1139)
T ss_dssp HHHHC----CSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHH---------SSSCHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHhc----cCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCC---------HHHHHHHHHHHHHHHHhCCChhhhh
Confidence 98752 2233332 23567777888999999999877643321 2233455666666666665544332
Q ss_pred H--------HHHHHHHHHH-HH-cCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCC---HHHHHH
Q 016124 291 K--------LVLEALYIRE-IA-FGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSES---EEVMLT 357 (394)
Q Consensus 291 ~--------~~~~a~~~~~-~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~---~~~~~~ 357 (394)
. ..+..+.... .. .....|.. +..|-..+...|++...|..+|+++..+....-.... .....+
T Consensus 992 ~lpf~gl~~~Vd~IL~~kAr~~~~~~~~p~Y---y~iLYs~ri~r~dyR~AA~vmYe~~~RL~~~~~~~~~~~~~~q~~~ 1068 (1139)
T 4fhn_B 992 NYSMPTLRQDVDNLLERKAFQMINVESQPCW---YNILFSWRYKHQNYRDAAAIIYEKLSRYISTTELIGKKERTFIIEH 1068 (1139)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHHHHCCSTHH---HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHhCCccccCCCH---HHHhHhhhhccCChHHHHHHHHHHHHHhhhccccccchhHHHHHHH
Confidence 2 1122222111 11 01222332 3445556677888887888899998877653211111 123345
Q ss_pred HHHHHHHHHHh
Q 016124 358 LKKVVSYLDKL 368 (394)
Q Consensus 358 ~~~la~~~~~~ 368 (394)
+..+..++.--
T Consensus 1069 yL~~INaLslv 1079 (1139)
T 4fhn_B 1069 YLIVLNTLELL 1079 (1139)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHhcC
Confidence 55555555544
No 252
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.41 E-value=0.14 Score=44.08 Aligned_cols=143 Identities=11% Similarity=0.064 Sum_probs=62.1
Q ss_pred HHHhhchhHHHHHHHHHH--HHHHHhc-CCCCcchHhhhHhHHHHHHHhCcHHHHHHHHH-------HHHHHHHHh-hCC
Q 016124 68 LGSIGRAKKAVEIYHRVI--TILELNR-GTESADLVLPLFSLGSLFIKEGKAVDAESVFS-------RILKIYTKV-YGE 136 (394)
Q Consensus 68 ~~~~g~~~~A~~~~~~al--~~~~~~~-~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~-------~al~~~~~~-~~~ 136 (394)
+...+++++|..+-...+ ....... ..-+...+.+|+..+.++...|+......... ..+..++.. +..
T Consensus 146 L~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~ 225 (523)
T 4b4t_S 146 LWDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKH 225 (523)
T ss_dssp ---------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCS
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhccc
Confidence 456678888888776554 2222111 01134456677777788877787765432211 122222222 223
Q ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 137 NDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 137 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
+....+..++.+-..|...+.+++|..+..++. +.. ........+..++.+|.++..+++|.+|.+++..|+..
T Consensus 226 D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~---~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 226 DNETKAMLINLILRDFLNNGEVDSASDFISKLE--YPH---TDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp SSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCT---TTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred CcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCc---ccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 445567778889999999999999999998874 111 11244556777889999999999999999999988753
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.04 E-value=1.2 Score=32.28 Aligned_cols=101 Identities=16% Similarity=0.147 Sum_probs=64.7
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHH
Q 016124 152 KCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHL 231 (394)
Q Consensus 152 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 231 (394)
....|+++.|.+..+.. +. ...|..+|......|+++-|+.+|.++-. +
T Consensus 15 AL~lg~l~~A~e~a~~l------------~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D----------------~ 63 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL------------ND---SITWERLIQEALAQGNASLAEMIYQTQHS----------------F 63 (177)
T ss_dssp HHHTTCHHHHHHHHHHH------------CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTC----------------H
T ss_pred HHhcCCHHHHHHHHHHh------------CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCC----------------H
Confidence 35789999998876543 11 23567899999999999999999887532 2
Q ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHH
Q 016124 232 LNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEA 296 (394)
Q Consensus 232 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 296 (394)
..+..+|...|+.+.-....+.+.. ... +..-..++...|+++++++.|.+.
T Consensus 64 ~~L~~Ly~~tg~~e~L~kla~iA~~-------~g~------~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 64 DKLSFLYLVTGDVNKLSKMQNIAQT-------RED------FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH-------TTC------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHH-------Ccc------HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 2344556667776554444333322 111 122234567788988888888654
No 254
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=93.93 E-value=2 Score=34.54 Aligned_cols=172 Identities=10% Similarity=-0.056 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK 222 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 222 (394)
..+..+..=|..++++++|++++.... ..+.+.|++..|.++..-.++...+..
T Consensus 34 Q~~Rtl~~Ry~~~~~~~eAidlL~~ga------------------------~~ll~~~Q~~sa~DLa~llvev~~~~~-- 87 (312)
T 2wpv_A 34 QTLRTIANRYVRSKSYEHAIELISQGA------------------------LSFLKAKQGGSGTDLIFYLLEVYDLAE-- 87 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH------------------------HHHHHTTCHHHHHHHHHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHH------------------------HHHHHCCCcchHHHHHHHHHHHHHHcC--
Confidence 344555555666667766666654433 334444555555555444444444432
Q ss_pred CCccHHHHHHHHHHHHHHcccHH-HHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHH------
Q 016124 223 EHPSFVTHLLNLAASYSRSKNFV-EAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLE------ 295 (394)
Q Consensus 223 ~~~~~~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~------ 295 (394)
.+........+..++.....-+ .=..+.++++....+. +.........+..+|..+...|++.+|..+|--
T Consensus 88 -~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~-g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~ 165 (312)
T 2wpv_A 88 -VKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKF-SEYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSM 165 (312)
T ss_dssp -CCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHT-SSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHH
T ss_pred -CCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccH
Confidence 1112223334444443322111 1245566666644443 222334567788899999999999999987742
Q ss_pred --HHHHHHHHcCC---CChhHHHHHHHHHH-HHHHhCCCchHHHHHHHHHHHHH
Q 016124 296 --ALYIREIAFGK---DSLPVGEALDCLVS-IQTRLGEDDTKLLELLKRVLRIQ 343 (394)
Q Consensus 296 --a~~~~~~~~~~---~~~~~~~~~~~l~~-~~~~~g~~~~~A~~~~~~al~~~ 343 (394)
...+.-+.... +.|.....+..-+. .|...|+.. .|...+....+..
T Consensus 166 ~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~-~A~~~~~~f~~~~ 218 (312)
T 2wpv_A 166 IKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNIS-FAHESKDIFLERF 218 (312)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHH
Confidence 11111111111 33444444433333 356778877 8888877766544
No 255
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.58 E-value=1 Score=39.16 Aligned_cols=63 Identities=10% Similarity=0.065 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 186 ENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 186 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
..++..+|.+......++.|..+|.+|..+ .|..+..++.||.+....|+.-+|.-+|.+++.
T Consensus 152 hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~--------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQL--------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHcccHHHHHHHHHHHHHHHHHHHHh--------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 456788999999999999999999999986 577888999999999999999999998888764
No 256
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=92.44 E-value=2.1 Score=30.55 Aligned_cols=98 Identities=16% Similarity=0.088 Sum_probs=69.1
Q ss_pred HHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHH---------
Q 016124 61 LLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYT--------- 131 (394)
Q Consensus 61 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~--------- 131 (394)
-..++.+++..|.|..++-++. ....+.+.+.-+.||....+|..|+..++..+.---
T Consensus 36 ~lL~~I~LyyngEY~R~Lf~L~-------------~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~ 102 (242)
T 3kae_A 36 RMLMSIVLYLNGEYTRALFHLH-------------KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDAR 102 (242)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH-------------TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHH
T ss_pred HhhhhhhhhhcchHhHHHHHHH-------------hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccc
Confidence 3456778888999988876543 223455666678899999999999999998873100
Q ss_pred -HhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 132 -KVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 132 -~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
..+--+..+.-..+..+|.++...|+-++|+.++......
T Consensus 103 ~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 103 IQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 0000111222335778999999999999999999988764
No 257
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=91.11 E-value=3.1 Score=29.73 Aligned_cols=97 Identities=14% Similarity=0.035 Sum_probs=68.5
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH----------
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMT---------- 259 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~---------- 259 (394)
..++.++.-.|.+..++-++.. ..++.+.+.-+.+|....++..|+..++..+.---
T Consensus 37 lL~~I~LyyngEY~R~Lf~L~~-------------lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~ 103 (242)
T 3kae_A 37 MLMSIVLYLNGEYTRALFHLHK-------------LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARI 103 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-------------CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHH
T ss_pred hhhhhhhhhcchHhHHHHHHHh-------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccccccc
Confidence 3467788889999888776542 23455666678899999999999999998873100
Q ss_pred hhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 260 KTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 260 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
+..--+..+--..+..+|.++...|+.++|+.++......
T Consensus 104 ~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~ 143 (242)
T 3kae_A 104 QEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGK 143 (242)
T ss_dssp HTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCC
Confidence 0111111223345677899999999999999999887654
No 258
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=90.88 E-value=5.6 Score=32.31 Aligned_cols=244 Identities=7% Similarity=-0.051 Sum_probs=134.3
Q ss_pred HHhhhch---HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhh
Q 016124 26 YSTLENY---EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLP 102 (394)
Q Consensus 26 ~~~~g~~---~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 102 (394)
-...|+| =+|-+.++......-+ ........+.++.-+..+...|++..|.++..-.++.+.+..-+ .....
T Consensus 22 ~I~~G~y~~~YEAHQ~~RTi~~Ry~~--~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~---~~~~~ 96 (336)
T 3lpz_A 22 RIAEGQPEEQYEAAQETRLVAARYSK--QGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQR---VDGAS 96 (336)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCC---CCHHH
T ss_pred HHhCCCCccccHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCC---CCHHH
Confidence 4456777 6666666665544433 33445566667777777777888888877777777776664321 11234
Q ss_pred hHhHHHHHHHhCcH-HHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHH------------HH
Q 016124 103 LFSLGSLFIKEGKA-VDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKK------------AL 169 (394)
Q Consensus 103 ~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~------------a~ 169 (394)
...+..++.....- ..=..+..+++....+. +............+|..|...+++.+|..+|-- ..
T Consensus 97 ~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~-g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ 175 (336)
T 3lpz_A 97 RGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKF-GDYPAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEY 175 (336)
T ss_dssp HHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHH-SSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHH
Confidence 44555555444321 12255777788777663 322222334567789999999999999887621 11
Q ss_pred HHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCC--------C------CccHHH-HHHHH
Q 016124 170 RVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGK--------E------HPSFVT-HLLNL 234 (394)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~--------~------~~~~~~-~~~~l 234 (394)
+...+. ++....+ ........|...++...|...+..-.+...+.... . .|.... -+..+
T Consensus 176 ew~~~~---~~~e~dl--fiaRaVL~yL~l~n~~~A~~~~~~f~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~l 250 (336)
T 3lpz_A 176 EWYKQD---ESHTAPL--YCARAVLPYLLVANVRAANTAYRIFTSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISM 250 (336)
T ss_dssp HHHHTS---CGGGHHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHH
T ss_pred HHHHhc---CCccHHH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhcCCCccccccccCCcccccCCCCchHHHHHH
Confidence 122211 1111111 11223345778899999988877766654332110 0 111111 11222
Q ss_pred HHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc
Q 016124 235 AASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 284 (394)
Q Consensus 235 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 284 (394)
...-+..+. ...|....+.+...+..+.+.....+..+|..|+...
T Consensus 251 Lllt~q~~~----~~lF~~L~~~Y~~~l~rd~~~~~~~L~~IG~~YFgi~ 296 (336)
T 3lpz_A 251 LLLSVQKGS----PDLFRQLKSKYEANLNELNGIWDTALELIAEMYFGIQ 296 (336)
T ss_dssp HHHHHHSCC----HHHHHHHHHHTHHHHHTTTTTTHHHHHHHHHHHHCCC
T ss_pred HHHHHhcCC----HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHcCCC
Confidence 223344443 3456655555555544443366777788888888654
No 259
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=88.94 E-value=7 Score=30.52 Aligned_cols=122 Identities=15% Similarity=0.077 Sum_probs=75.4
Q ss_pred HHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHH
Q 016124 238 YSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDC 317 (394)
Q Consensus 238 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 317 (394)
..+.|+.++|+...+..++ ..|........+..+++-.|+|+.|...++.+.++. +.....+..|..
T Consensus 7 ll~~g~L~~al~~~~~~VR--------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~-----p~~~~~a~~yr~ 73 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIK--------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLF-----PEYLPGASQLRH 73 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHH--------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----GGGHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHH--------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-----chhhHHHHHHHH
Confidence 4677899999999888877 568888888999999999999999999998877754 222222222322
Q ss_pred HHHHHHHhCCCchHHHHHHHHHHH--HHHhhcCCCCHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHH
Q 016124 318 LVSIQTRLGEDDTKLLELLKRVLR--IQEREFGSESEEVMLTLKKVVSYLDKLGRKEEKFPLKKRLSNLR 385 (394)
Q Consensus 318 l~~~~~~~g~~~~~A~~~~~~al~--~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 385 (394)
+..+-.. =.+.+. .....++. .+. ......-+......|+.++|.++-.++.+..
T Consensus 74 lI~aE~~-----------R~~vfaG~~~P~~~g~-~~~-w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~a 130 (273)
T 1zbp_A 74 LVKAAQA-----------RKDFAQGAATAKVLGE-NEE-LTKSLVSFNLSMVSQDYEQVSELALQIEELR 130 (273)
T ss_dssp HHHHHHH-----------HHHHTTSCCCEECCCS-CHH-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHH-----------HHHHHcCCCCCCCCCC-CHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHhcC
Confidence 2211110 001110 00111222 222 2233334555667799999999988887654
No 260
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=88.84 E-value=14 Score=34.01 Aligned_cols=88 Identities=11% Similarity=-0.002 Sum_probs=62.9
Q ss_pred chhHHHHHHHHHHHHHHHhcCC---CC-------cchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHH
Q 016124 73 RAKKAVEIYHRVITILELNRGT---ES-------ADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVG 142 (394)
Q Consensus 73 ~~~~A~~~~~~al~~~~~~~~~---~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~ 142 (394)
+--+|+....++++........ .+ +.....+..-+..+...|+++-|+.+.++|... .|...
T Consensus 300 ~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--------aPseF 371 (754)
T 4gns_B 300 KELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--------ALDSF 371 (754)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSSCH
T ss_pred hhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--------Cchhh
Confidence 3456777777776543221110 11 112335556678888999999999999999987 45566
Q ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHH
Q 016124 143 MAMCSLAHAKCANGNAEEAVELYKKA 168 (394)
Q Consensus 143 ~~~~~la~~~~~~g~~~~A~~~~~~a 168 (394)
.+|..|+.+|..+|+|+.|+-.+..+
T Consensus 372 ~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 372 ESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 78999999999999999999777654
No 261
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.52 E-value=20 Score=35.24 Aligned_cols=184 Identities=10% Similarity=0.030 Sum_probs=106.4
Q ss_pred hhhHhHHHHHHHhCcHHHHHHHHHHHHHHHH-------------Hhh--CCCchHHHHHHHHHHHHHHHCCCHHHHHHHH
Q 016124 101 LPLFSLGSLFIKEGKAVDAESVFSRILKIYT-------------KVY--GENDGRVGMAMCSLAHAKCANGNAEEAVELY 165 (394)
Q Consensus 101 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-------------~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 165 (394)
...+.+|.++...|++++|..+|+++-.-.. ... ..........|..+..++...|.++.++++.
T Consensus 843 ~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa 922 (1139)
T 4fhn_B 843 IAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFS 922 (1139)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3457899999999999999999988632110 000 0001112345777888999999999999999
Q ss_pred HHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHH
Q 016124 166 KKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFV 245 (394)
Q Consensus 166 ~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 245 (394)
+.|++... ..++......+.++=..+...|+|++|...+...- +......++..+....+..|..+
T Consensus 923 ~lAi~~~~-----~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~p---------d~~~r~~cLr~LV~~lce~~~~~ 988 (1139)
T 4fhn_B 923 LLADASKE-----TDDEDLSIAITHETLKTACAAGKFDAAHVALMVLS---------TTPLKKSCLLDFVNQLTKQGKIN 988 (1139)
T ss_dssp HHHHHHCC-----SCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHH---------HSSSCHHHHHHHHHHHHHHCCHH
T ss_pred HHHHHhcc-----CCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCC---------CHHHHHHHHHHHHHHHHhCCChh
Confidence 99998642 22333344467778888999999999987764321 11122344555555555555443
Q ss_pred HHHHH--------HHHHHHHH-Hhh-cCCCCCcchHHHHHHHHHHHhhcChHHHH-HHHHHHHHHHH
Q 016124 246 EAERL--------LRICLDIM-TKT-VGPDDQSISFPMLHLGITLYHLNRDKEAE-KLVLEALYIRE 301 (394)
Q Consensus 246 ~A~~~--------~~~a~~~~-~~~-~~~~~~~~~~~~~~la~~~~~~g~~~~A~-~~~~~a~~~~~ 301 (394)
.=..+ .+..+.-. +.. .....| ..+..|=..+...|++..|. .+|+.+.++..
T Consensus 989 ~L~~lpf~gl~~~Vd~IL~~kAr~~~~~~~~p---~Yy~iLYs~ri~r~dyR~AA~vmYe~~~RL~~ 1052 (1139)
T 4fhn_B 989 QLLNYSMPTLRQDVDNLLERKAFQMINVESQP---CWYNILFSWRYKHQNYRDAAAIIYEKLSRYIS 1052 (1139)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHHHHHHHHCCST---HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred hhhCCCCccHHHHHHHHHHHHHHhCCccccCC---CHHHHhHhhhhccCChHHHHHHHHHHHHHhhh
Confidence 33211 11122111 111 001112 22333444566778887654 46677666544
No 262
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.38 E-value=12 Score=31.43 Aligned_cols=131 Identities=11% Similarity=-0.094 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCC---------CCCcchHHHH
Q 016124 204 EGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGP---------DDQSISFPML 274 (394)
Q Consensus 204 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~---------~~~~~~~~~~ 274 (394)
.-+.+|+..+.-+.... +|-. ....+..+.....+.++|.+++++......+.... .......+..
T Consensus 57 ~~~~ly~~fi~~f~~ki---n~L~--lv~~~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~ 131 (393)
T 4b4t_O 57 LRLRLYDNFVSKFYDKI---NQLS--VVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDS 131 (393)
T ss_dssp CCHHHHHHHHHHHHHHS---CSHH--HHHTTHHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc---CHHH--HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHH
Confidence 33456666665554433 1211 11113345566778999999988765433322211 1123345566
Q ss_pred HHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Q 016124 275 HLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGEDDTKLLELLKRVL 340 (394)
Q Consensus 275 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~A~~~~~~al 340 (394)
.++..|...|+.++|..+++++-.......+.+..-....+...+..+...+++. .+....-..+
T Consensus 132 ~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a-~~y~~~l~~l 196 (393)
T 4b4t_O 132 EIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFN-SFYYTSLLYL 196 (393)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHH
Confidence 7889999999999999999999888776544333344555555667777777665 4443333333
No 263
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=86.20 E-value=10 Score=29.47 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHHHHHhh--CCCCccHHHH
Q 016124 163 ELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGR----------GQEGRELLEECLLITEKYK--GKEHPSFVTH 230 (394)
Q Consensus 163 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~----------~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~ 230 (394)
..+..++.+.....-+....+.....+-..|..|.-.-. .+.|...|++|.++..... ++.||-....
T Consensus 119 ~iC~diL~llD~~Lip~a~~~skVFY~KMKGDYyRYlAE~~~g~erk~~~e~a~~aYq~A~eiA~~~L~~~pThPiRLGL 198 (268)
T 3efz_A 119 LESEDVIRIIDDNLLMYSEEGARAFCIKLKGDLMRYKAEILKDEEKNQCIKQAVEFYEDALQRERSFLEKYPSDPLYLAT 198 (268)
T ss_dssp HHHHHHHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTGGGCHHHHHH
T ss_pred HHHHHHHHHHHHhhcccCCchhHHHHHhccchHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCChHHHHH
Confidence 344555555544311112222223333445666654322 3678899999999998777 7888887777
Q ss_pred HHHHHHHHH-HcccHHHHHHHHHHHHHH
Q 016124 231 LLNLAASYS-RSKNFVEAERLLRICLDI 257 (394)
Q Consensus 231 ~~~la~~~~-~~g~~~~A~~~~~~a~~~ 257 (394)
..|.+..|. -.+++++|..+.+++.+-
T Consensus 199 aLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 199 ILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 777777766 579999999999998874
No 264
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.64 E-value=15 Score=30.85 Aligned_cols=136 Identities=7% Similarity=0.022 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC---------CCcchHhhh
Q 016124 33 EKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT---------ESADLVLPL 103 (394)
Q Consensus 33 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~ 103 (394)
+.-+.+|...+.-+.....+ -..+. .+..+.....+.++|.+++++........... .......+.
T Consensus 56 ~~~~~ly~~fi~~f~~kin~--L~lv~---~~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~ 130 (393)
T 4b4t_O 56 PLRLRLYDNFVSKFYDKINQ--LSVVK---YLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLID 130 (393)
T ss_dssp CCCHHHHHHHHHHHHHHSCS--HHHHH---TTHHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCH--HHHHH---HHHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHH
Confidence 33456666666655443221 11111 12334456678889998888765443332211 112234556
Q ss_pred HhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q 016124 104 FSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIK 173 (394)
Q Consensus 104 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 173 (394)
..++..|...|+.++|..+++++-.......+.+.......+...+..+...+++..+....-..+....
T Consensus 131 ~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~~~ 200 (393)
T 4b4t_O 131 SEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLE 200 (393)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence 6788999999999999999999988877654444445566667778888899999988877777776554
No 265
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=83.90 E-value=13 Score=28.82 Aligned_cols=55 Identities=16% Similarity=0.092 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHH
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDI 257 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~ 257 (394)
+.|...|++|..+......+.||.......+.+..|.. .+++++|..+.+++++-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 57888999999999888888899877777777776665 69999999988887763
No 266
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=83.38 E-value=4.9 Score=25.06 Aligned_cols=38 Identities=11% Similarity=0.053 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 016124 12 EPLLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 49 (394)
Q Consensus 12 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 49 (394)
+-+.+..+...+..+...|+|++|+++.+++.......
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eA 48 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEA 48 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 44567778899999999999999999999998766543
No 267
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=79.33 E-value=19 Score=27.66 Aligned_cols=56 Identities=18% Similarity=0.168 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHH
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDIM 258 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 258 (394)
+.|...|++|..+.....++.||-......|.+..|.. .+++++|..+.+++++-.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~A 204 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDA 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 67888999999999888888899877777777776655 799999999988887643
No 268
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=79.01 E-value=21 Score=27.81 Aligned_cols=56 Identities=16% Similarity=0.104 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHHHHHHHhc--CCCCcchHhhhHhHHHHHH-HhCcHHHHHHHHHHHHHH
Q 016124 74 AKKAVEIYHRVITILELNR--GTESADLVLPLFSLGSLFI-KEGKAVDAESVFSRILKI 129 (394)
Q Consensus 74 ~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~~~l~~~~~-~~g~~~~A~~~~~~al~~ 129 (394)
.+.|...|+.|.++..... .+.+|.......+.+..|+ -.++.++|....++|++-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 4678899999999987777 7778877766667776666 579999999999998875
No 269
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=78.21 E-value=3.9 Score=24.79 Aligned_cols=31 Identities=26% Similarity=0.540 Sum_probs=26.9
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 016124 19 LLHMGSMYSTLENYEKSMLVYQRVINVLESR 49 (394)
Q Consensus 19 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 49 (394)
...+|+-|...|+|+.|+.+|+.+++...+.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~ 45 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKY 45 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999877654
No 270
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=78.02 E-value=23 Score=27.73 Aligned_cols=55 Identities=20% Similarity=0.150 Sum_probs=44.5
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHH
Q 016124 67 VLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKI 129 (394)
Q Consensus 67 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 129 (394)
.....|+.++|+......++. .|..+.....+..++.-.|+++.|...++.+.++
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~--------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l 60 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKA--------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKL 60 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHT--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHh
Confidence 345678899999888877663 6777777888899999999999999988877655
No 271
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=77.73 E-value=26 Score=28.23 Aligned_cols=182 Identities=9% Similarity=-0.031 Sum_probs=110.1
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHh
Q 016124 26 YSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFS 105 (394)
Q Consensus 26 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 105 (394)
-...|+|=+|.+.++.......+ ..........++.-+..+...|++..|-++..-.++.+.+.. .+........
T Consensus 23 ~I~~G~yYEAhQ~~Rtl~~Ry~~--~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~---~~~~~~~~~r 97 (312)
T 2wpv_A 23 KIKAGDYYEAHQTLRTIANRYVR--SKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAE---VKVDDISVAR 97 (312)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT---CCCSHHHHHH
T ss_pred HhhccChHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcC---CCCCHHHHHH
Confidence 44567888888887776665543 234456677777778888888888888888777777776643 2222334445
Q ss_pred HHHHHHHhCcHH-HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHH------------HHHH
Q 016124 106 LGSLFIKEGKAV-DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKA------------LRVI 172 (394)
Q Consensus 106 l~~~~~~~g~~~-~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a------------~~~~ 172 (394)
+..++.....-+ .=.++..+++....+.. .........+..+|..|...|++.+|..+|-.. .+..
T Consensus 98 l~~l~~~~p~~~~~r~~fi~~ai~WS~~~g-~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~ 176 (312)
T 2wpv_A 98 LVRLIAELDPSEPNLKDVITGMNNWSIKFS-EYKFGDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWL 176 (312)
T ss_dssp HHHHHTTCCTTCTTHHHHHHHHHHHHHHTS-SCTTCCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCchHHHHHHHHHHHHhhcC-CCCCCCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHH
Confidence 555554433211 23567778888776642 222223356778999999999999999877421 1122
Q ss_pred HhcccCCCchHHHHHHHHHH-HHHHHHcCChHHHHHHHHHHHHHH
Q 016124 173 KDSNYMSLDDSIMENMRIDL-AELLHIVGRGQEGRELLEECLLIT 216 (394)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~l-a~~~~~~g~~~~A~~~~~~a~~~~ 216 (394)
.+. ....+.. ...+... ...|...|+...|...++.-....
T Consensus 177 ~~~--~~~~~~e-~dlf~~RaVL~yL~l~n~~~A~~~~~~f~~~~ 218 (312)
T 2wpv_A 177 CQV--DDIEDST-VAEFFSRLVFNYLFISNISFAHESKDIFLERF 218 (312)
T ss_dssp HHT--TCCCHHH-HHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHH
T ss_pred Hhc--CCCCcch-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 210 0011222 2222222 335667899999998888766554
No 272
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=77.61 E-value=23 Score=27.54 Aligned_cols=56 Identities=11% Similarity=-0.053 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH-hCCCchHHHHHHHHHHHH
Q 016124 286 DKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR-LGEDDTKLLELLKRVLRI 342 (394)
Q Consensus 286 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~A~~~~~~al~~ 342 (394)
.+.|...|++|..+....+.|.||-......+.+..|.. .++++ +|..+.++|+.-
T Consensus 151 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~-~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPD-RACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHH-HHHHHHHHHHHH
Confidence 357888999999999888899999877777777777665 57677 888887777654
No 273
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=75.95 E-value=31 Score=28.22 Aligned_cols=57 Identities=19% Similarity=0.195 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccC
Q 016124 119 AESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYM 178 (394)
Q Consensus 119 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 178 (394)
++.+|.+++...+..++..+.. -+..+|..+++.+++.+|+..+-.+-...+.-++.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvY---PYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~ 332 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIY---PYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYS 332 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHhccCCcc---chhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCC
Confidence 8899999999988887665543 36678889999999999999999998887665433
No 274
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=75.71 E-value=13 Score=31.79 Aligned_cols=100 Identities=8% Similarity=-0.012 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHHHHhcccCC--C----chHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH--hhC-CCCccH
Q 016124 157 NAEEAVELYKKALRVIKDSNYMS--L----DDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEK--YKG-KEHPSF 227 (394)
Q Consensus 157 ~~~~A~~~~~~a~~~~~~~~~~~--~----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~--~~~-~~~~~~ 227 (394)
..+++...+.++...+....... . .........+.+-.+|.+.|+..-+...++.. +.... ... ......
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i-~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNF-QPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTH-HHHCCCSCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHh-ccCCCCcChhhCCccce
Confidence 45667777777777654321111 1 12233344466778999999999998887543 22110 000 011245
Q ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Q 016124 228 VTHLLNLAASYSRSKNFVEAERLLRICLDI 257 (394)
Q Consensus 228 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 257 (394)
+..++.+|.++...++|.+|.+.+..|+..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 667888999999999999999999999986
No 275
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=75.64 E-value=25 Score=26.89 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHHh
Q 016124 159 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEGRELLEECLLITEKY 219 (394)
Q Consensus 159 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~~ 219 (394)
+.|...|++|.++.... ..|.+|.......|.+..|+. .++.++|..+.++++.-....
T Consensus 147 e~a~~aY~~A~~iA~~~--L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~Ai~e 206 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAE 206 (234)
T ss_dssp HHHHHHHHHHHHHHHHH--SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcc--CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 57888999999998754 677777777777788777766 799999999998887755443
No 276
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=75.12 E-value=27 Score=27.10 Aligned_cols=56 Identities=18% Similarity=0.088 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHH
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDIM 258 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 258 (394)
+.|...|++|.++.....++.||-......|.+..|.. .+++++|..+.+++.+-.
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~A 229 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 57889999999999888888899877777777777665 699999999988887643
No 277
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=74.88 E-value=27 Score=27.06 Aligned_cols=58 Identities=10% Similarity=0.115 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHH
Q 016124 159 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 159 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 218 (394)
+.|...|++|.++.... ..|.+|.......|.+..|.. .++.++|..+.++|+.-...
T Consensus 173 e~a~~aY~~A~~iA~~~--L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~Ai~ 231 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTE--LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIA 231 (261)
T ss_dssp HHHHHHHHHHHHHHHHH--SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh--CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 67888999999988654 677777777777788877766 69999999998888765543
No 278
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=73.81 E-value=14 Score=23.12 Aligned_cols=40 Identities=10% Similarity=-0.009 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhC
Q 016124 182 DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKG 221 (394)
Q Consensus 182 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 221 (394)
+...+..+...+..+...|+|++|+++.+++.........
T Consensus 11 pLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmk 50 (97)
T 2crb_A 11 PLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMK 50 (97)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445666778899999999999999999999877666553
No 279
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=73.25 E-value=29 Score=26.54 Aligned_cols=56 Identities=18% Similarity=0.088 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHH
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDIM 258 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 258 (394)
+.|...|++|.++......+.||.......+.+..|.. .+++++|..+.+++.+-.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~A 203 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDA 203 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 57888999999999888888899877777777776665 799999999988887644
No 280
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=72.45 E-value=31 Score=26.58 Aligned_cols=58 Identities=12% Similarity=0.125 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHH
Q 016124 159 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 159 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 218 (394)
+.|...|+.|.++.... ..|.+|.......|.+..|+. .++.++|..+.++++.-...
T Consensus 148 ~~a~~aY~~A~~iA~~~--L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~Ai~ 206 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEH--MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIA 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHH--SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh--CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 67888999999988754 677777777777788777666 79999999998888775543
No 281
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=72.01 E-value=15 Score=22.79 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 144 AMCSLAHAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 144 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
.+...|.-.-..|++++|+.+|..+++.+...
T Consensus 18 ~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 18 TVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 34445555678899999999999999886544
No 282
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=71.86 E-value=7.7 Score=23.51 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHh
Q 016124 358 LKKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQK 391 (394)
Q Consensus 358 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 391 (394)
...+|+=|...|+|+.|+.+|+.+++.-.++-..
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~ 48 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYS 48 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 4567888999999999999999999877666443
No 283
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.44 E-value=74 Score=30.55 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=51.2
Q ss_pred HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHH-------------HHhhC--CCchHHHHHHHHHHHHHHHCCCHHHHHHH
Q 016124 100 VLPLFSLGSLFIKEGKAVDAESVFSRILKIY-------------TKVYG--ENDGRVGMAMCSLAHAKCANGNAEEAVEL 164 (394)
Q Consensus 100 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-------------~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 164 (394)
+..-+.+|.++...|++++|..+|++|-.-. ..... +........|..+..++...+-++-++.+
T Consensus 840 ~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~f 919 (950)
T 4gq2_M 840 PIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 919 (950)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHH
Confidence 3445789999999999999999998764211 00000 01112334677888888899999999999
Q ss_pred HHHHHHHH
Q 016124 165 YKKALRVI 172 (394)
Q Consensus 165 ~~~a~~~~ 172 (394)
.+.|++..
T Consensus 920 A~lAI~~~ 927 (950)
T 4gq2_M 920 SLLADASK 927 (950)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhhc
Confidence 99988754
No 284
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=70.77 E-value=16 Score=22.51 Aligned_cols=28 Identities=43% Similarity=0.489 Sum_probs=22.1
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 147 SLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 147 ~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
..|.-.-..|++++|+.+|.++++.+..
T Consensus 24 ~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 24 INAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3445557889999999999999987654
No 285
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=70.01 E-value=48 Score=27.78 Aligned_cols=58 Identities=22% Similarity=0.338 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCC
Q 016124 119 AESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMS 179 (394)
Q Consensus 119 A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 179 (394)
++.+|.+++...+..++..+.. -|..+|..+++.+++.+|+..+-.+-...+.-++..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvY---PYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~r 355 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIY---PYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCR 355 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCG
T ss_pred HHHHHHHHHHHHHHHhccCCcc---ceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCc
Confidence 7889999999988887665543 466788899999999999999999988887654433
No 286
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=68.34 E-value=85 Score=29.99 Aligned_cols=174 Identities=17% Similarity=0.188 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHh
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGK--TSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELN 91 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 91 (394)
..+-+++.+|.++...++ ++..++...+.-.....+. .......+...+|.++.-.++ +++.+.+...+.-
T Consensus 411 ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~d---- 483 (963)
T 4ady_A 411 IKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYN---- 483 (963)
T ss_dssp HHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHT----
T ss_pred HHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhc----
Confidence 356677888888776664 5666666655432100000 112333455577777665554 3455555554431
Q ss_pred cCCCCcch-HhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 92 RGTESADL-VLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 92 ~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
++... ..+-..+|.++...|+-+-...++..+.+ ..+..+.+ ...+|..+...|+.+.+....+....
T Consensus 484 ---d~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e-------~~~e~vrR-~aalgLGll~~g~~e~~~~li~~L~~ 552 (963)
T 4ady_A 484 ---DSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE-------TQHGNITR-GLAVGLALINYGRQELADDLITKMLA 552 (963)
T ss_dssp ---CCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH-------CSCHHHHH-HHHHHHHHHTTTCGGGGHHHHHHHHH
T ss_pred ---CCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc-------cCcHHHHH-HHHHHHHhhhCCChHHHHHHHHHHHh
Confidence 22211 24556678888888886655555554432 12222222 23444445567777776666554433
Q ss_pred HHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHH
Q 016124 171 VIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECL 213 (394)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~ 213 (394)
..++.....+-..+|..|...|+...-..++..+.
T Consensus 553 --------~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~ 587 (963)
T 4ady_A 553 --------SDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAV 587 (963)
T ss_dssp --------CSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHH
T ss_pred --------CCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc
Confidence 12333333444678888999999655444665554
No 287
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=68.03 E-value=38 Score=25.87 Aligned_cols=182 Identities=12% Similarity=0.106 Sum_probs=95.3
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH-hhchhHHHHHHHHHHHHHHHhcCCCCc
Q 016124 19 LLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGS-IGRAKKAVEIYHRVITILELNRGTESA 97 (394)
Q Consensus 19 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~A~~~~~~al~~~~~~~~~~~~ 97 (394)
+..++.+..+.++|++...+.+++.... + .....-.+.++.+|-. .|....+........ ++.......
T Consensus 11 ~v~~AklaeqaeRyddM~~~mk~v~~~~-----~--eLs~EERnLLSvaYKNvig~rR~swRiissie---qke~~~~~~ 80 (236)
T 3iqu_A 11 LIQKAKLAEQAERYEDMAAFMKGAVEKG-----E--ELSCEERNLLSVAYKNVVGGQRAAWRVLSSIE---QKSNEEGSE 80 (236)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC-----C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHTSTTCC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcC-----C--cCCHHHHHHHHHHHHhhcccchHHHHHHHHHH---HHHhhcCCH
Confidence 4567888899999999999988877641 1 1112223334444422 233333333332211 111011111
Q ss_pred chHhhhHhHHHHHHHhCcH-HHHHHHHHHHHHHHHHhhC--CCchH-HHHHHHHHHHHHHH-----CCC-----HHHHHH
Q 016124 98 DLVLPLFSLGSLFIKEGKA-VDAESVFSRILKIYTKVYG--ENDGR-VGMAMCSLAHAKCA-----NGN-----AEEAVE 163 (394)
Q Consensus 98 ~~~~~~~~l~~~~~~~g~~-~~A~~~~~~al~~~~~~~~--~~~~~-~~~~~~~la~~~~~-----~g~-----~~~A~~ 163 (394)
... .+..-|. .+. .+=...+...+.+....+- ..++. ....+-..|..|.. .|+ -+.|..
T Consensus 81 ~~~----~~i~~yr--~kie~EL~~iC~dil~lld~~Lip~a~~~eskVFY~KmKGDyyRYlAE~~~g~~r~~~~e~a~~ 154 (236)
T 3iqu_A 81 EKG----PEVREYR--EKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARS 154 (236)
T ss_dssp CCC----SHHHHHH--HHHHHHHHHHHHHHHHHHHTTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCSTTHHHHHHHHHH
T ss_pred HHH----HHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCccCCchHHHHHHHHhhhhHHHHHHHhcCchHHHHHHHHHHH
Confidence 110 1111111 111 1223444555555443321 11222 22223344555432 343 467888
Q ss_pred HHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHHH
Q 016124 164 LYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 164 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~~ 218 (394)
.|+.|.++.... ..|.+|.......|.+..|+. .+++++|..+.++|++-...
T Consensus 155 aY~~A~~iA~~~--L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~Ai~ 208 (236)
T 3iqu_A 155 AYQEAMDISKKE--MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMA 208 (236)
T ss_dssp HHHHHHHHHHHH--SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh--CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 999999988754 677777777777788777664 69999999998888765433
No 288
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=67.11 E-value=36 Score=25.24 Aligned_cols=86 Identities=6% Similarity=0.018 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCc
Q 016124 37 LVYQRVINVLESR-YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGK 115 (394)
Q Consensus 37 ~~~~~al~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 115 (394)
..+++++..+... .-.+++.....+...+..+ ..+...++...|.-.... - -....+..|...|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~---~---IG~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNK---G---IGTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHH---T---SSTTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHC---C---CcHHHHHHHHHHHHHHHHcCC
Confidence 5777777765432 1245678888888777765 233355777777765443 1 123456778888999999999
Q ss_pred HHHHHHHHHHHHHH
Q 016124 116 AVDAESVFSRILKI 129 (394)
Q Consensus 116 ~~~A~~~~~~al~~ 129 (394)
+.+|...|+.+++.
T Consensus 131 ~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 131 FLEAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999874
No 289
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=66.13 E-value=20 Score=22.00 Aligned_cols=27 Identities=37% Similarity=0.582 Sum_probs=21.3
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 148 LAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 148 la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
.|.-.-..|++++|+.+|..+++.+..
T Consensus 17 ~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 17 LAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 344456789999999999999987654
No 290
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=65.22 E-value=61 Score=27.21 Aligned_cols=61 Identities=25% Similarity=0.366 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCc
Q 016124 118 DAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD 181 (394)
Q Consensus 118 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 181 (394)
.++.+|.+|+...++.+...+. .-|..+|-.+.+.+++.+|+..+..+-.....-++...|
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hv---YPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reD 342 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCRED 342 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred CHHHHHHHHHHHHHHhcccCcc---cceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccch
Confidence 4678999999999888765553 346778999999999999999999998887765444333
No 291
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=64.80 E-value=24 Score=22.29 Aligned_cols=30 Identities=13% Similarity=0.149 Sum_probs=23.1
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 146 CSLAHAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 146 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
...|.-.-..|+|++|+.+|..+++.+...
T Consensus 19 v~~Ave~D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 19 LKRAVELDAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 344455567899999999999999987654
No 292
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=64.74 E-value=58 Score=26.75 Aligned_cols=71 Identities=20% Similarity=0.202 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHccc--HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHH
Q 016124 228 VTHLLNLAASYSRSKN--FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 301 (394)
Q Consensus 228 ~~~~~~la~~~~~~g~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 301 (394)
..++.+||.+-...-- ...++.+|.+++...+..++..| ..-+..+|..+.+.+++.+|+..+-++-....
T Consensus 255 PmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~H---vYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~ 327 (472)
T 3re2_A 255 PMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHH---IYPYTYLGGYYYRKKKYYEAIASWVDAGYVAG 327 (472)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred chhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCC---ccchhhhhhhhhhcchHHHHHHHHHHHHHHHH
Confidence 3455556555433221 12388899999998888876554 34567889999999999999999988877654
No 293
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.59 E-value=1.1e+02 Score=29.35 Aligned_cols=75 Identities=7% Similarity=-0.146 Sum_probs=47.3
Q ss_pred CcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH-------------HHHcC--CCChhHHHHHHHHHHHHHHhCCCchH
Q 016124 267 QSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR-------------EIAFG--KDSLPVGEALDCLVSIQTRLGEDDTK 331 (394)
Q Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-------------~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~~ 331 (394)
|.....-+.+|.++...|++++|..+|++|-.-. ..... +.......-|..+..++...+-++ -
T Consensus 837 ~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~-~ 915 (950)
T 4gq2_M 837 NSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYI-D 915 (950)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHH-H
T ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHH-H
Confidence 3344455889999999999999999999864211 00000 001112234556677777777777 7
Q ss_pred HHHHHHHHHHH
Q 016124 332 LLELLKRVLRI 342 (394)
Q Consensus 332 A~~~~~~al~~ 342 (394)
++.+.+.|++.
T Consensus 916 vi~fA~lAI~~ 926 (950)
T 4gq2_M 916 ALEFSLLADAS 926 (950)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 77777777754
No 294
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=62.54 E-value=31 Score=22.91 Aligned_cols=26 Identities=31% Similarity=0.442 Sum_probs=20.3
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 150 HAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 150 ~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
.-.-..|+|++|+.+|..+++.+...
T Consensus 26 ve~D~ag~y~eAl~lY~~Aie~l~~a 51 (117)
T 2cpt_A 26 AQEDKAGNYEEALQLYQHAVQYFLHV 51 (117)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 33456699999999999999976543
No 295
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.24 E-value=24 Score=21.62 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLES 48 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 48 (394)
+.-+...|.-.-..|++++|+.+|.++++.+..
T Consensus 11 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 11 ARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 334556666677778888888888888876544
No 296
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=61.79 E-value=44 Score=28.65 Aligned_cols=99 Identities=8% Similarity=-0.012 Sum_probs=62.0
Q ss_pred hHhHHHHHHHhCcHHHHHHHHHHHHHHHHH---hhCCCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHhcccC
Q 016124 103 LFSLGSLFIKEGKAVDAESVFSRILKIYTK---VYGENDGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV-IKDSNYM 178 (394)
Q Consensus 103 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~---~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-~~~~~~~ 178 (394)
.+.+-.+|++.|+..-+...++.. +.... ...-.....+...+.+|.++...++|.+|.+.+..|+.. +.... .
T Consensus 179 ~n~L~kiYFkl~~~~lckni~k~i-~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~~-~ 256 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIFKNF-QPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLPL-T 256 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHHHTH-HHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCC-C
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-ccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCccc-c
Confidence 345668899999999888887543 32211 000112346677889999999999999999999999998 65420 0
Q ss_pred CC-chHHHHHHHHHHHHHHHHcCChH
Q 016124 179 SL-DDSIMENMRIDLAELLHIVGRGQ 203 (394)
Q Consensus 179 ~~-~~~~~~~~~~~la~~~~~~g~~~ 203 (394)
.+ .......++..+.-+-...|++.
T Consensus 257 ~~~~~~n~~~ILkyLIpv~LLlG~~P 282 (455)
T 3t5v_B 257 NQAITRNGTRILNYMIPTGLILGKMV 282 (455)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCB
T ss_pred chhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 00 11222333444444555567653
No 297
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=61.03 E-value=20 Score=21.36 Aligned_cols=28 Identities=25% Similarity=0.304 Sum_probs=23.9
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 145 MCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 145 ~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
...+|..+...|++++|..+|-+|+.++
T Consensus 20 eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 20 EIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3567888899999999999999999865
No 298
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=59.68 E-value=21 Score=21.25 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=22.2
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 274 LHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 274 ~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
..+|..+...|++++|..+|-+|+..+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 457888888999999998888888765
No 299
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=59.29 E-value=1e+02 Score=27.81 Aligned_cols=127 Identities=13% Similarity=0.040 Sum_probs=77.4
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHhhCCCCccHH
Q 016124 149 AHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKYKGKEHPSFV 228 (394)
Q Consensus 149 a~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 228 (394)
+.......+.+.|...+....... .-+..........++.-....+...++..++.+.... ..+...
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~------~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 287 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQ------QLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMR------SQSTSL- 287 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHT------TCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHT------CCCHHH-
T ss_pred HHHHHHhcCHHHHHHHHHhhhhcc------CCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhcccc------CCChHH-
Confidence 334445557888888887655421 1233333444445555555556456777777654321 112222
Q ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 229 THLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 229 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
. ...+......|+++.|..++...-. .........+-+|..+...|+.++|..+|+++..
T Consensus 288 -~-e~~~r~Alr~~d~~~a~~~~~~l~~--------~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 288 -I-ERRVRMALGTGDRRGLNTWLARLPM--------EAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp -H-HHHHHHHHHHTCHHHHHHHHHHSCT--------TGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred -H-HHHHHHHHHCCCHHHHHHHHHHccc--------cccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 2 2233344567999999998865422 2224566778899999999999999999988754
No 300
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=59.25 E-value=41 Score=23.25 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=37.8
Q ss_pred HHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 238 YSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 238 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
...+|+-++-.+.+...+. +.+..+..+..+|.+|.+.|+..+|.+++.+|-+
T Consensus 101 lv~~~KkDqLdki~~~~l~--------n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILK--------NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHhHHHHHHHHHhc--------cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 4456666655554443222 3445567889999999999999999999999866
No 301
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=59.14 E-value=28 Score=21.37 Aligned_cols=28 Identities=21% Similarity=0.057 Sum_probs=21.6
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHh
Q 016124 147 SLAHAKCANGNAEEAVELYKKALRVIKD 174 (394)
Q Consensus 147 ~la~~~~~~g~~~~A~~~~~~a~~~~~~ 174 (394)
..|.-.-..|++++|+.+|..+++.+..
T Consensus 18 ~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 18 QKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3444456789999999999999997654
No 302
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=59.09 E-value=67 Score=27.66 Aligned_cols=56 Identities=7% Similarity=0.045 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHhc-------------CchhhhhhHHHHHHHHH
Q 016124 331 KLLELLKRVLRIQEREFGSESEEVMLTLKKVVSYLDKLG-------------RKEEKFPLKKRLSNLRM 386 (394)
Q Consensus 331 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-------------~~~~A~~~~~~a~~~~~ 386 (394)
+|++.|++|++..+++...+++.....+..++..|...| ..++|..+-.++-++.+
T Consensus 450 kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDyy~~AA~k~~yG~~eqAe~l~~~A~~~~~ 518 (526)
T 2wb7_A 450 GAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDYYVNAARKALNGDLEQAKIDAEKAKEYSN 518 (526)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 788888888888888877777877777777766665544 44555555555554443
No 303
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=57.47 E-value=66 Score=25.03 Aligned_cols=56 Identities=14% Similarity=0.237 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH-cCChHHHHHHHHHHHHHHH
Q 016124 159 EEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI-VGRGQEGRELLEECLLITE 217 (394)
Q Consensus 159 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~~ 217 (394)
+.|...|++|.++. .. ..|.+|.......|.+..|+. .++.++|..+.++++.-..
T Consensus 173 e~a~~aY~~A~~iA-~~--L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~Ai 229 (260)
T 2npm_A 173 EDALKAYKDATVVA-KD--LEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMAI 229 (260)
T ss_dssp HHHHHHHHHHHHHH-TT--SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-Hh--CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 57888999999998 43 677777777777788877776 7999999999988876543
No 304
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=57.00 E-value=88 Score=26.32 Aligned_cols=53 Identities=9% Similarity=0.043 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHH
Q 016124 246 EAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 301 (394)
Q Consensus 246 ~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 301 (394)
.++.+|.+++...+..++..| ..-+..+|..+.+.+++.+|+..+-++-....
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~H---vYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~ 349 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQ 349 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhccCC---ccceeecchhhhhcchHHHHHHHHHHHHHHHH
Confidence 378889999998888876554 34567889999999999999999988877654
No 305
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=56.01 E-value=35 Score=21.63 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=23.6
Q ss_pred HHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 274 LHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 274 ~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
..+|..+...|+++.|+.+|-+|+.++
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 457888999999999999999998877
No 306
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=55.95 E-value=34 Score=21.20 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 016124 16 DAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 49 (394)
Q Consensus 16 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 49 (394)
+..+...|.-.-..|++++|+.+|..+++.+...
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 4445667777788999999999999999987654
No 307
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=55.58 E-value=93 Score=26.19 Aligned_cols=71 Identities=13% Similarity=0.007 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHccc--HHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHHH
Q 016124 228 VTHLLNLAASYSRSKN--FVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIRE 301 (394)
Q Consensus 228 ~~~~~~la~~~~~~g~--~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 301 (394)
..++.+||.+-...-. ...++.+|++++...+..+...| ...+..+|-.+.+.+++.+|+..+-++-....
T Consensus 262 PmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~h---vYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~ 334 (489)
T 4gq4_A 262 PMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEH---IYPYMYLAGYHCRNRNVREALQAWADTATVIQ 334 (489)
T ss_dssp HHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCC---SHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred chhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCc---ccceeecchHHHHhhhHHHHHHHhhhhhhhhh
Confidence 3445555554432211 12467899999998888876655 45677889999999999999999998877654
No 308
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=54.89 E-value=11 Score=23.82 Aligned_cols=32 Identities=13% Similarity=-0.075 Sum_probs=25.3
Q ss_pred HHHHHHHHHhcCchhhhhhHHHHHHHHHHHHH
Q 016124 359 KKVVSYLDKLGRKEEKFPLKKRLSNLRMKYKQ 390 (394)
Q Consensus 359 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~ 390 (394)
..+|..+...|+++.|...|-+|+.++.+-.+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~ 55 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQ 55 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHH
Confidence 45788888889999999988888888765443
No 309
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=52.41 E-value=1.7e+02 Score=28.13 Aligned_cols=175 Identities=14% Similarity=0.231 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCC--CCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Q 016124 55 ILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGT--ESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTK 132 (394)
Q Consensus 55 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 132 (394)
....-++..+|.++...++ ++..++...+.-.....+. .......+...||.++...++ +++.+.+...+..
T Consensus 410 ~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~d--- 483 (963)
T 4ady_A 410 FIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYN--- 483 (963)
T ss_dssp HHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHT---
T ss_pred HHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhc---
Confidence 3456677888888766654 5666666655431100000 011222355577777776666 4455555555431
Q ss_pred hhCCCchHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 016124 133 VYGENDGRV-GMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQEGRELLEE 211 (394)
Q Consensus 133 ~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 211 (394)
++... ..+-..+|.++...|+-+-...++..+.+ . .+...... ..+|..+...|+.+.+..+.+.
T Consensus 484 ----d~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e----~----~~e~vrR~--aalgLGll~~g~~e~~~~li~~ 549 (963)
T 4ady_A 484 ----DSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE----T----QHGNITRG--LAVGLALINYGRQELADDLITK 549 (963)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH----C----SCHHHHHH--HHHHHHHHTTTCGGGGHHHHHH
T ss_pred ----CCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc----c----CcHHHHHH--HHHHHHhhhCCChHHHHHHHHH
Confidence 22222 24556788889899987666655555443 1 12222222 3344445567777776666554
Q ss_pred HHHHHHHhhCCCCccH-HHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 212 CLLITEKYKGKEHPSF-VTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 212 a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
.... .+|.. ..+...+|..|...|+...-..++..+..
T Consensus 550 L~~~-------~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~ 588 (963)
T 4ady_A 550 MLAS-------DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVS 588 (963)
T ss_dssp HHHC-------SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred HHhC-------CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcc
Confidence 3321 23322 22345678888899996554446666554
No 310
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=52.00 E-value=39 Score=20.75 Aligned_cols=30 Identities=10% Similarity=0.001 Sum_probs=23.9
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Q 016124 190 IDLAELLHIVGRGQEGRELLEECLLITEKY 219 (394)
Q Consensus 190 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 219 (394)
...|.-.-..|++++|+.+|.++++.+...
T Consensus 23 v~~Ave~D~~g~y~eAl~lY~~aie~l~~a 52 (83)
T 2w2u_A 23 AINAVKADKEGNAEEAITNYKKAIEVLAQL 52 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 344556678899999999999999887654
No 311
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=49.87 E-value=82 Score=23.88 Aligned_cols=181 Identities=9% Similarity=-0.045 Sum_probs=98.2
Q ss_pred HHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHhhCCCchHH
Q 016124 63 GMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE-GKAVDAESVFSRILKIYTKVYGENDGRV 141 (394)
Q Consensus 63 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~ 141 (394)
.++.+..+.++|++.....+++........ ......-.+.|+.+|-.. |....+...+.. .+... ..+...
T Consensus 11 ~~AKlaeqaeRyddM~~~mk~v~~~~~~~~---~eLt~EERnLLSvAYKNvig~rR~swRiiss----iEqke-k~~~~~ 82 (227)
T 2o8p_A 11 YRAQVFEWGGCFDKMFEALKSLIYLSEFEN---SEFDDEERHLLTLCIKHKISDYRTMTSQVLQ----EQTKQ-LNNDEL 82 (227)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHS-CSCHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhccC---CCCCHHHHHHHHHHHHHhhcccHHHHHHHHH----HHHHH-cCCHHH
Confidence 567888889999999999998877311111 112222233334433221 222222222211 11110 111111
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHH-----HcCChHHHHHHHHHHHHHH
Q 016124 142 GMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLH-----IVGRGQEGRELLEECLLIT 216 (394)
Q Consensus 142 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~g~~~~A~~~~~~a~~~~ 216 (394)
..+..-|... =-.+=...+...+.+..+. .-|........+-..|..|. ..|+.+.|...|+.|.++.
T Consensus 83 ----~~~i~~yr~k-ie~EL~~iC~dil~lld~~--Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA 155 (227)
T 2o8p_A 83 ----VKICSEYVFS-LRKDIKAFLQSFEDCVDRL--VEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLL 155 (227)
T ss_dssp ----HHHHHHHHHH-HHHHHHHHHHHHHHHHHTC--CCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHH-HHHHHHHHHhhHHHHHHHh--ccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHH
Confidence 1111111111 1123334566677766654 23332222333344455554 3566889999999999999
Q ss_pred HHhhCCCCccHHHHHHHHHHHH-HHcccHHHHHHHHHHHHHHH
Q 016124 217 EKYKGKEHPSFVTHLLNLAASY-SRSKNFVEAERLLRICLDIM 258 (394)
Q Consensus 217 ~~~~~~~~~~~~~~~~~la~~~-~~~g~~~~A~~~~~~a~~~~ 258 (394)
....++.||-......|.+..| .-.+++++|..+.++++.+.
T Consensus 156 ~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~ 198 (227)
T 2o8p_A 156 CEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKIL 198 (227)
T ss_dssp HHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHH
T ss_pred HhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 8877788887666666665554 56789999999999997754
No 312
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=49.52 E-value=78 Score=23.51 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=43.3
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQE 204 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 204 (394)
...+...+.+|.++...++|.+|.+.+..|+..+.+. .......++..+.-+-...|+...
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~-----~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS-----SQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT-----CHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh-----HHHHHHHHHHHHHHHHHHcCCCCC
Confidence 3456677899999999999999999999999976432 223333444555555566777643
No 313
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=49.03 E-value=29 Score=29.83 Aligned_cols=35 Identities=14% Similarity=0.040 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
......+...+|.+|...|+|++|....++++...
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 44556678889999999999999999999998753
No 314
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=48.50 E-value=94 Score=24.18 Aligned_cols=55 Identities=11% Similarity=0.127 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHH
Q 016124 203 QEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSR-SKNFVEAERLLRICLDIM 258 (394)
Q Consensus 203 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~-~g~~~~A~~~~~~a~~~~ 258 (394)
+.|...|++|.++. ....+.||.......+.+..|.. .+++++|..+.+++.+-.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 57888999999998 77788888777777777776665 799999999988887643
No 315
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=48.47 E-value=89 Score=23.89 Aligned_cols=57 Identities=11% Similarity=-0.029 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHH-hCCCchHHHHHHHHHHHHH
Q 016124 286 DKEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTR-LGEDDTKLLELLKRVLRIQ 343 (394)
Q Consensus 286 ~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~A~~~~~~al~~~ 343 (394)
.+.|...|++|.++....+.|.||-......+.+..|.. .++++ +|..+.++|++-.
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~-~Ac~lAk~Afd~A 206 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPE-EAISLAKTTFDEA 206 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHH
Confidence 367888999999999888999999877777777777664 46666 9998888887644
No 316
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=48.31 E-value=34 Score=24.27 Aligned_cols=68 Identities=6% Similarity=-0.025 Sum_probs=46.6
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCC-chHHHHHHHHH---HHHHHHHhhchhHHHHHHHHHHHHHHH
Q 016124 20 LHMGSMYSTLENYEKSMLVYQRVINVLESRYGK-TSILLVTSLLG---MAKVLGSIGRAKKAVEIYHRVITILEL 90 (394)
Q Consensus 20 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~-~~~~~~~~~~~---l~~~~~~~g~~~~A~~~~~~al~~~~~ 90 (394)
+.-|..++..|+|=+|-+.++...... .++ +.......+.. .|......|+..-|..++.+++.....
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~---~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~ 107 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNY---GRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRG 107 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTT---CSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhc---CCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 445677778899999999988776532 111 02233333333 455567789999999999999987654
No 317
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=47.60 E-value=60 Score=24.10 Aligned_cols=60 Identities=7% Similarity=-0.081 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhchhH
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRYGKTSILLVTSLLGMAKVLGSIGRAKK 76 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 76 (394)
....-.+.+|..+...++|.+|...+..|+..+... .......++..+.-+-.-.|++..
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~---~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS---SQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT---CHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh---HHHHHHHHHHHHHHHHHHcCCCCC
Confidence 455667899999999999999999999999875321 123334444455445555677553
No 318
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=47.56 E-value=57 Score=22.66 Aligned_cols=40 Identities=8% Similarity=0.036 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhHHH
Q 016124 272 PMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPVGE 313 (394)
Q Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 313 (394)
.+...|.+|...|+.+.|.-+|-+.+.+...+ +.||+...
T Consensus 44 ~L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk~ 83 (144)
T 2a9u_A 44 KIFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFKQ 83 (144)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchhh
Confidence 44566889999999999999999999988655 78887643
No 319
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=47.54 E-value=74 Score=22.68 Aligned_cols=82 Identities=10% Similarity=0.161 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhC
Q 016124 36 MLVYQRVINVLESR-YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEG 114 (394)
Q Consensus 36 ~~~~~~al~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 114 (394)
..++++++..+... .-.+++..+.++...+... +++..+|...... .-....+..|...|..+...|
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~~p~~if~~L~~~------~IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC------NEPLDMYSYLHNQ------GIGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC------SCHHHHHHHHHHT------TSSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc------CCHHHHHHHHHHC------CcchhhHHHHHHHHHHHHHcC
Confidence 45667776654321 1234567777777776653 4466666654332 113355677888899999999
Q ss_pred cHHHHHHHHHHHHHH
Q 016124 115 KAVDAESVFSRILKI 129 (394)
Q Consensus 115 ~~~~A~~~~~~al~~ 129 (394)
++.+|...|+.+++.
T Consensus 111 ~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 111 NFRKADAIFQEGIQQ 125 (164)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999999875
No 320
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=45.77 E-value=1.1e+02 Score=24.34 Aligned_cols=158 Identities=15% Similarity=0.102 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhhc---hhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcH--HHHHHHHHHHHHHHHHh
Q 016124 59 TSLLGMAKVLGSIGR---AKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEGKA--VDAESVFSRILKIYTKV 133 (394)
Q Consensus 59 ~~~~~l~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~--~~A~~~~~~al~~~~~~ 133 (394)
..+..-|.+--..|- -+-|-+.|.+|+.+++..... +.....+...+...+.....+ +.-..+..++-....+.
T Consensus 100 rL~Lq~A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~Isd-Sk~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~askL 178 (298)
T 2r17_C 100 RLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISD-SKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL 178 (298)
T ss_dssp HHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHhhccc-hHHHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHHhc
Confidence 333333444444443 456778889999988875432 223334444444444444433 22223333333333333
Q ss_pred hCCCchHHHHHHHHHHHHHHH----------CCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHcCChH
Q 016124 134 YGENDGRVGMAMCSLAHAKCA----------NGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHIVGRGQ 203 (394)
Q Consensus 134 ~~~~~~~~~~~~~~la~~~~~----------~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 203 (394)
+ ..|+...+...-+.++.. ..+-+..++++++++++..........-.....+ .+.-..|+..|...
T Consensus 179 L--KK~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~d~~~~v~LfveI-Ln~ylyff~~g~~~ 255 (298)
T 2r17_C 179 L--KKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEI-LNRYIYFYEKENDA 255 (298)
T ss_dssp S--SHHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHHHHHTTTCTT
T ss_pred c--CcHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHhChhhHHHHHHHH-HHHHHhhhhCCCCc
Confidence 2 346666666666777764 2578899999999999987651100011112222 34455566777766
Q ss_pred HHHHHHHHHHHHHHHhh
Q 016124 204 EGRELLEECLLITEKYK 220 (394)
Q Consensus 204 ~A~~~~~~a~~~~~~~~ 220 (394)
-..++.+..+++.....
T Consensus 256 Vt~~~in~LI~lI~~~l 272 (298)
T 2r17_C 256 VTIQVLNQLIQKIREDL 272 (298)
T ss_dssp SCHHHHHHHHHHHHTTT
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 66667777777665533
No 321
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=45.31 E-value=31 Score=29.72 Aligned_cols=35 Identities=20% Similarity=0.154 Sum_probs=29.7
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRVI 172 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 172 (394)
.+....++..+|.+|...|+|++|....++++...
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~~ 226 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKGA 226 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence 44566788889999999999999999999998753
No 322
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=44.81 E-value=45 Score=28.66 Aligned_cols=42 Identities=12% Similarity=-0.100 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCChhHHHHHHHHHHHHHHhCCC
Q 016124 287 KEAEKLVLEALYIREIAFGKDSLPVGEALDCLVSIQTRLGED 328 (394)
Q Consensus 287 ~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 328 (394)
++|+++|++|+...+++...+.+.....+..++..|...|++
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Confidence 578888888888888887788888888888888887777654
No 323
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=44.78 E-value=76 Score=22.01 Aligned_cols=53 Identities=23% Similarity=0.211 Sum_probs=36.9
Q ss_pred HHHcCChHHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Q 016124 196 LHIVGRGQEGRELLEECLLITEKYKGKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLD 256 (394)
Q Consensus 196 ~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 256 (394)
...+|+-++=.+.+...+ + +.+..+..+..+|.+|.+.|+..+|.+++.+|-+
T Consensus 101 lv~~~KkDqLdki~~~~l-------~-n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREIL-------K-NNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhccHhHHHHHHHHHh-------c-cCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 345666655444443322 1 3344567788999999999999999999999876
No 324
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=44.15 E-value=68 Score=21.28 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHh
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESRY 50 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 50 (394)
.+..+...|.-.-..|+|++|+.+|..+++.+....
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 344456677777788999999999999999876653
No 325
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=43.67 E-value=85 Score=22.28 Aligned_cols=67 Identities=10% Similarity=-0.057 Sum_probs=45.7
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCC-chHHHHHHH---HHHHHHHHHcCChHHHHHHHHHHHHHHHH
Q 016124 147 SLAHAKCANGNAEEAVELYKKALRVIKDSNYMSL-DDSIMENMR---IDLAELLHIVGRGQEGRELLEECLLITEK 218 (394)
Q Consensus 147 ~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~-~~~~~~~~~---~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 218 (394)
.-+..++..|+|-+|-+.++..-.... ++ +.......+ ...|......|+...|..++.+++.....
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~-----~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~ 107 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYG-----RGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRG 107 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTC-----SSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 345667777999999999998765321 12 122223333 33455667789999999999999987654
No 326
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=43.14 E-value=34 Score=23.80 Aligned_cols=39 Identities=5% Similarity=-0.098 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhcChHHHHHHHHHHHHHHHHHcCCCChhH
Q 016124 272 PMLHLGITLYHLNRDKEAEKLVLEALYIREIAFGKDSLPV 311 (394)
Q Consensus 272 ~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~ 311 (394)
.+...|.+|...|+.+.|.-+|-+...+....+ +.||+.
T Consensus 42 ~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy 80 (146)
T 2xze_A 42 EIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccc
Confidence 445678999999999999999999988886443 456654
No 327
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=43.14 E-value=81 Score=21.88 Aligned_cols=42 Identities=2% Similarity=-0.072 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHhhcCCCCHHHHH
Q 016124 312 GEALDCLVSIQTRLGEDDTKLLELLKRVLRIQEREFGSESEEVML 356 (394)
Q Consensus 312 ~~~~~~l~~~~~~~g~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 356 (394)
+..+...|..|...|+.+ .|.-+|-+.+.++..+ +.||+...
T Consensus 42 a~~L~r~A~~y~~EGd~E-~AYilymRy~~L~~kI--pkHpdyk~ 83 (144)
T 2a9u_A 42 ALKIFKTAEECRLDRDEE-RAYVLYMKYVTVYNLI--KKRPDFKQ 83 (144)
T ss_dssp HHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHH--TTSHHHHH
T ss_pred HHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHH--hcCcchhh
Confidence 345667788999999999 9999999998888644 56777654
No 328
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=42.74 E-value=57 Score=27.99 Aligned_cols=35 Identities=9% Similarity=-0.091 Sum_probs=29.4
Q ss_pred CCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHHH
Q 016124 266 DQSISFPMLHLGITLYHLNRDKEAEKLVLEALYIR 300 (394)
Q Consensus 266 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 300 (394)
......+...+|.+|...|+|++|....++++...
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 220 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKDA 220 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhCC
Confidence 44556677889999999999999999999998753
No 329
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=42.67 E-value=1.1e+02 Score=23.19 Aligned_cols=82 Identities=10% Similarity=0.139 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHhC
Q 016124 36 MLVYQRVINVLESR-YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKEG 114 (394)
Q Consensus 36 ~~~~~~al~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 114 (394)
..++++++..+... .-.+++..+..+...+.. .+++..+|.-.... .-....+..|...|..+...|
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~------~~~p~~if~~L~~~------~IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY------IDEPVELFSFLAHH------HIGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT------CSCHHHHHHHHHHT------TCSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHc------cCCHHHHHHHHHHC------CcchhHHHHHHHHHHHHHHcC
Confidence 45666666654332 123456667676666653 24566666654332 112345677888899999999
Q ss_pred cHHHHHHHHHHHHHH
Q 016124 115 KAVDAESVFSRILKI 129 (394)
Q Consensus 115 ~~~~A~~~~~~al~~ 129 (394)
++.+|...|+.+++.
T Consensus 165 ~~~~A~~Vy~~Gi~~ 179 (223)
T 4aez_C 165 LFQKADEVYQKGKRM 179 (223)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999999875
No 330
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=40.97 E-value=63 Score=20.00 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINV 45 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 45 (394)
.+..+..-|.-++..++|.+|..+|+++...
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 4566677788899999999999999999875
No 331
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=40.76 E-value=63 Score=27.78 Aligned_cols=34 Identities=15% Similarity=-0.069 Sum_probs=29.0
Q ss_pred CCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 266 DQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 266 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
.+....++..+|.+|...|+|++|....++++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4555667788999999999999999999999874
No 332
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=40.00 E-value=99 Score=22.02 Aligned_cols=82 Identities=13% Similarity=0.096 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhh-CCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc
Q 016124 206 RELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 284 (394)
Q Consensus 206 ~~~~~~a~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 284 (394)
..++++++..+.... -.+++....++...+... ++ +..+|..... +- -....+..|...|..+...|
T Consensus 43 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~---~~---p~~if~~L~~---~~---IG~~~AlfY~~wA~~lE~~~ 110 (164)
T 2wvi_A 43 STLLERAVEALQGEKRYYSDPRFLNLWLKLGRLC---NE---PLDMYSYLHN---QG---IGVSLAQFYISWAEEYEARE 110 (164)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHHHC---SC---HHHHHHHHHH---TT---SSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhhhhhccCHHHHHHHHHHHHhc---CC---HHHHHHHHHH---CC---cchhhHHHHHHHHHHHHHcC
Confidence 445666655432211 124566666666666542 33 4555554433 11 22356677788899999999
Q ss_pred ChHHHHHHHHHHHHH
Q 016124 285 RDKEAEKLVLEALYI 299 (394)
Q Consensus 285 ~~~~A~~~~~~a~~~ 299 (394)
++.+|.+.|+..++.
T Consensus 111 ~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 111 NFRKADAIFQEGIQQ 125 (164)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999999874
No 333
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=39.48 E-value=1.8e+02 Score=24.77 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=26.3
Q ss_pred CchHHH-HHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q 016124 11 DEPLLD-AILLHMGSMYSTLENYEKSMLVYQRVINV 45 (394)
Q Consensus 11 ~~~~~~-~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 45 (394)
+.|+.- ..+..|+..+...|+|.+|--++..+..+
T Consensus 5 ~~pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aal 40 (428)
T 2wm9_A 5 STPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTAL 40 (428)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 345543 45588999999999999999888755543
No 334
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=38.36 E-value=1.3e+02 Score=22.80 Aligned_cols=83 Identities=12% Similarity=0.049 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHhh-CCCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhc
Q 016124 206 RELLEECLLITEKYK-GKEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLN 284 (394)
Q Consensus 206 ~~~~~~a~~~~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g 284 (394)
..++++++..+.... -.+++....++...+.. . +++..+|.-... +- -....+..|...|..+...|
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~---~---~~p~~if~~L~~---~~---IG~~~AlfYe~wA~~lE~~g 164 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY---I---DEPVELFSFLAH---HH---IGQESSIFYEEYANYFESRG 164 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT---C---SCHHHHHHHHHH---TT---CSTTBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHc---c---CCHHHHHHHHHH---CC---cchhHHHHHHHHHHHHHHcC
Confidence 456666665543221 12455566666666552 2 345556655443 11 22345667788899999999
Q ss_pred ChHHHHHHHHHHHHHH
Q 016124 285 RDKEAEKLVLEALYIR 300 (394)
Q Consensus 285 ~~~~A~~~~~~a~~~~ 300 (394)
++.+|...|+..+...
T Consensus 165 ~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 165 LFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcC
Confidence 9999999999998743
No 335
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=37.39 E-value=36 Score=29.45 Aligned_cols=34 Identities=12% Similarity=-0.002 Sum_probs=29.2
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
......++..+|.+|...|+|++|....++++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3445668889999999999999999999999875
No 336
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=35.91 E-value=1.1e+02 Score=21.42 Aligned_cols=83 Identities=7% Similarity=0.059 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCCCcchHhhhHhHHHHHHHh
Q 016124 35 SMLVYQRVINVLESR-YGKTSILLVTSLLGMAKVLGSIGRAKKAVEIYHRVITILELNRGTESADLVLPLFSLGSLFIKE 113 (394)
Q Consensus 35 A~~~~~~al~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 113 (394)
=...+++++..+... .-.+++..+..+...+.. .+++...|.-.... .-....+..|...|..+...
T Consensus 47 l~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~------~~dp~~if~~L~~~------~IG~~~AlfYe~wA~~lE~~ 114 (152)
T 4a1g_A 47 LITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEY------NSDLHQFFEFLYNH------GIGTLSSPLYIAWAGHLEAQ 114 (152)
T ss_dssp HHHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTT------BSCHHHHHHHHHTT------TTTTTBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcccccccCCHHHHHHHHHHHHh------cCCHHHHHHHHHHC------CCcHHHHHHHHHHHHHHHHc
Confidence 345556665554321 123456777777666654 24466666654331 11234567788889999999
Q ss_pred CcHHHHHHHHHHHHHH
Q 016124 114 GKAVDAESVFSRILKI 129 (394)
Q Consensus 114 g~~~~A~~~~~~al~~ 129 (394)
|++.+|...|+.+++.
T Consensus 115 g~~~~A~~Vy~~Gi~~ 130 (152)
T 4a1g_A 115 GELQHASAVLQRGIQN 130 (152)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHc
Confidence 9999999999999874
No 337
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=35.07 E-value=2.1e+02 Score=24.32 Aligned_cols=28 Identities=7% Similarity=-0.196 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhhcChHHHHHHHHHHHH
Q 016124 271 FPMLHLGITLYHLNRDKEAEKLVLEALY 298 (394)
Q Consensus 271 ~~~~~la~~~~~~g~~~~A~~~~~~a~~ 298 (394)
..+..|+..+...|++.+|--++..+..
T Consensus 12 ~wl~~La~~h~~~~n~~EAa~cl~~~aa 39 (428)
T 2wm9_A 12 TWLDSMARIHVKNGDLSEAAMCYVHVTA 39 (428)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4456889999999999999888765444
No 338
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=32.79 E-value=73 Score=27.42 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=28.4
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.+....+...+|.+|...|++++|..+.++++.
T Consensus 187 r~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 187 KPNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 344567888999999999999999999999875
No 339
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=32.08 E-value=89 Score=19.10 Aligned_cols=36 Identities=17% Similarity=0.146 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 016124 14 LLDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 49 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 49 (394)
..+..+...|.-.-..|++++|+.+|..+++.+...
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 445556777777788899999999999999987553
No 340
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=31.77 E-value=97 Score=19.44 Aligned_cols=35 Identities=17% Similarity=0.290 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q 016124 15 LDAILLHMGSMYSTLENYEKSMLVYQRVINVLESR 49 (394)
Q Consensus 15 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 49 (394)
.+..+...|.-.-..|+|++|+.+|..+++.+...
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 34446677888889999999999999999987654
No 341
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=31.00 E-value=2e+02 Score=22.93 Aligned_cols=148 Identities=14% Similarity=0.044 Sum_probs=77.5
Q ss_pred HHHHHHhCc---HHHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHhcccCCCc
Q 016124 107 GSLFIKEGK---AVDAESVFSRILKIYTKVYGENDGRVGMAMCSLAHAKCANGNA--EEAVELYKKALRVIKDSNYMSLD 181 (394)
Q Consensus 107 ~~~~~~~g~---~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~--~~A~~~~~~a~~~~~~~~~~~~~ 181 (394)
|.+--..|- -+-|-+.|.+|+.+++.... ++.....+...+...+.....+ +.-..+..++.....+. -.
T Consensus 106 A~~ad~~~~~~~e~iaYEFf~qAf~iYEe~Is-dSk~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~askL----LK 180 (298)
T 2r17_C 106 ALAAGEIGFENHETVAYEFMSQAFSLYEDEIS-DSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL----LK 180 (298)
T ss_dssp HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHTC----SS
T ss_pred HHHHHHhCccchhHHHHHHHHHHHHHHHhhcc-chHHHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHHhc----cC
Confidence 333334444 56678889999999988543 3444455555555555555543 22222333333222222 12
Q ss_pred hHHHHHHHHHHHHHHHH----------cCChHHHHHHHHHHHHHHHHhhCCCCccHHHHH---HHHHHHHHHcccHHHHH
Q 016124 182 DSIMENMRIDLAELLHI----------VGRGQEGRELLEECLLITEKYKGKEHPSFVTHL---LNLAASYSRSKNFVEAE 248 (394)
Q Consensus 182 ~~~~~~~~~~la~~~~~----------~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~---~~la~~~~~~g~~~~A~ 248 (394)
.+.-..+...-+..++. ..+.+..++++++++++..... +.......+ .+.-..|...|+..-..
T Consensus 181 K~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLqkaLkiA~~~~--d~~~~v~LfveILn~ylyff~~g~~~Vt~ 258 (298)
T 2r17_C 181 KPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCM--DPSLQVQLFIEILNRYIYFYEKENDAVTI 258 (298)
T ss_dssp HHHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHHHHHHHHHHSC--CHHHHHHHHHHHHHHHHHHHTTTCTTSCH
T ss_pred cHHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHHHHHHHHHHHh--ChhhHHHHHHHHHHHHHhhhhCCCCcccH
Confidence 23334444445555543 1466789999999999987753 111111111 12233455556544445
Q ss_pred HHHHHHHHHHHhh
Q 016124 249 RLLRICLDIMTKT 261 (394)
Q Consensus 249 ~~~~~a~~~~~~~ 261 (394)
++....+++..+.
T Consensus 259 ~~in~LI~lI~~~ 271 (298)
T 2r17_C 259 QVLNQLIQKIRED 271 (298)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555443
No 342
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=30.77 E-value=73 Score=27.54 Aligned_cols=34 Identities=6% Similarity=-0.083 Sum_probs=28.7
Q ss_pred CCcchHHHHHHHHHHHhhcChHHHHHHHHHHHHH
Q 016124 266 DQSISFPMLHLGITLYHLNRDKEAEKLVLEALYI 299 (394)
Q Consensus 266 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 299 (394)
......++..+|.+|+..|+|++|....++++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 3455567788999999999999999999998864
No 343
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=29.92 E-value=1e+02 Score=26.54 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLL 214 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 214 (394)
...++..+|++|...|++++|....++++.
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345667899999999999999999998875
No 344
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=28.86 E-value=1.5e+02 Score=20.62 Aligned_cols=34 Identities=26% Similarity=0.448 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhc
Q 016124 142 GMAMCSLAHAKCANGNAEEAVELYKKALRVIKDS 175 (394)
Q Consensus 142 ~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 175 (394)
+..+...|.+|...|+.+.|.-+|-+...++-..
T Consensus 40 a~~llr~A~~y~~egd~e~AYily~R~~~L~~e~ 73 (146)
T 2xze_A 40 GVEIIRMASIYSEEGNIEHAFILYNKYITLFIEK 73 (146)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3455667899999999999999999998887643
No 345
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=28.54 E-value=1.1e+02 Score=19.08 Aligned_cols=19 Identities=21% Similarity=0.428 Sum_probs=12.5
Q ss_pred CCCchHHHHHHHHHHHHHHh
Q 016124 326 GEDDTKLLELLKRVLRIQER 345 (394)
Q Consensus 326 g~~~~~A~~~~~~al~~~~~ 345 (394)
|+.+ +|+++|++.+.-..+
T Consensus 33 G~k~-~A~~~YkkGi~eL~~ 51 (89)
T 3eab_A 33 GQKE-QAVEWYKKGIEELEK 51 (89)
T ss_dssp SSGG-GSHHHHHHHHHHHHH
T ss_pred CCHH-HHHHHHHHHHHHHHh
Confidence 5666 777777777765444
No 346
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=27.81 E-value=1.2e+02 Score=26.45 Aligned_cols=33 Identities=18% Similarity=-0.018 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.....++..+|.+|...|++++|..+.++++..
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 445667888999999999999999999999874
No 347
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=24.88 E-value=2.1e+02 Score=21.19 Aligned_cols=86 Identities=19% Similarity=0.250 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHhhC-CCCccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHhhcC
Q 016124 207 ELLEECLLITEKYKG-KEHPSFVTHLLNLAASYSRSKNFVEAERLLRICLDIMTKTVGPDDQSISFPMLHLGITLYHLNR 285 (394)
Q Consensus 207 ~~~~~a~~~~~~~~~-~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 285 (394)
.++++++..+..... .+++.....+...+..+ ..+...++...|.-... +-. ....+..|...|..+...|+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~---~~I---G~~~AlfYe~wA~~lE~~g~ 130 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFN---KGI---GTKLSLFYEEFSKLLENAQF 130 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHH---HTS---STTBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHH---CCC---cHHHHHHHHHHHHHHHHcCC
Confidence 466776665433211 24566677777766654 23445677778776554 222 23456777888999999999
Q ss_pred hHHHHHHHHHHHHH
Q 016124 286 DKEAEKLVLEALYI 299 (394)
Q Consensus 286 ~~~A~~~~~~a~~~ 299 (394)
+.+|...|+..++.
T Consensus 131 ~~~A~~Vy~~GI~~ 144 (202)
T 3esl_A 131 FLEAKVLLELGAEN 144 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999999874
No 348
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=24.04 E-value=1.8e+02 Score=25.29 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
...++..+|++|...|++++|....++++..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3456677999999999999999999998864
No 349
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.86 E-value=1.6e+02 Score=25.38 Aligned_cols=31 Identities=13% Similarity=-0.104 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Q 016124 185 MENMRIDLAELLHIVGRGQEGRELLEECLLI 215 (394)
Q Consensus 185 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 215 (394)
...++..+|++|...|++++|....++++..
T Consensus 196 k~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 196 KLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 4456678999999999999999999999864
No 350
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.78 E-value=1.4e+02 Score=18.75 Aligned_cols=65 Identities=14% Similarity=0.007 Sum_probs=42.8
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCc-hHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHh
Q 016124 148 LAHAKCANGNAEEAVELYKKALRVIKDSNYMSLD-DSIMENMRIDLAELLHIVGRGQEGRELLEECLLITEKY 219 (394)
Q Consensus 148 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 219 (394)
-|..++..|+|-+|-+.++..-.... ++. .....-+....|......|+. |...+.+++......
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~-----~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~ 72 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKAT-----GEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGL 72 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCC-----HHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCC-----CchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhC
Confidence 35566778999999999998876431 111 112233334445556678888 999999999876544
No 351
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=23.34 E-value=72 Score=27.64 Aligned_cols=32 Identities=19% Similarity=0.208 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.....++..+|.+|...+++++|....++++.
T Consensus 177 ~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 177 PTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred ccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 44556788899999999999999999888764
No 352
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=23.11 E-value=3.3e+02 Score=22.73 Aligned_cols=34 Identities=12% Similarity=0.395 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhhh------chHHHHHHHHHHHHHHH
Q 016124 14 LLDAILLHMGSMYSTLE------NYEKSMLVYQRVINVLE 47 (394)
Q Consensus 14 ~~~~~~~~l~~~~~~~g------~~~~A~~~~~~al~~~~ 47 (394)
+.+.+++++|-++...+ ....|..+|++|-.++.
T Consensus 121 E~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~ 160 (392)
T 1zb1_A 121 EKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFE 160 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 46777888887776554 36788889998877654
No 353
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.57 E-value=1.5e+02 Score=25.53 Aligned_cols=34 Identities=24% Similarity=-0.021 Sum_probs=29.2
Q ss_pred chHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q 016124 138 DGRVGMAMCSLAHAKCANGNAEEAVELYKKALRV 171 (394)
Q Consensus 138 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 171 (394)
.+....++..+|.+|...|++++|....++++..
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 3445668888999999999999999999999875
No 354
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=20.81 E-value=3.9e+02 Score=22.75 Aligned_cols=111 Identities=13% Similarity=0.046 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCcchHhhhHhHHHHHHHhCcHHHHHHHHHHHHHHHHHhhCCCchHHHH---------------HHHH
Q 016124 83 RVITILELNRGTESADLVLPLFSLGSLFIKEGKAVDAESVFSRILKIYTKVYGENDGRVGM---------------AMCS 147 (394)
Q Consensus 83 ~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~---------------~~~~ 147 (394)
+.+..++... ........+..|+..+...++|.+|--++....++..-...+..+.... .+..
T Consensus 20 ~l~~~y~~~~--~~el~i~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~ 97 (436)
T 2yin_A 20 NLLNFYKDNN--REEMYIRYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYET 97 (436)
T ss_dssp HHHHHHHHHT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHH
T ss_pred HHHHHHHhCC--ChHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHH
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHH
Q 016124 148 LAHAKCANGNAEEAVELYKKALRVIKDSNYMSLDDSIMENMRIDLAELLHI 198 (394)
Q Consensus 148 la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 198 (394)
.+..+..-+.|+.|+.+++..+..++. ..-+-..++.++..++.+|..
T Consensus 98 ~i~~f~kg~~~E~ai~l~k~L~~~yE~---~~~Dy~~Ls~~~~~~a~~y~~ 145 (436)
T 2yin_A 98 IIGYFDKGKMWEEAISLCKELAEQYEM---EIFDYELLSQNLIQQAKFYES 145 (436)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHH---TSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
No 355
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=20.72 E-value=3.7e+02 Score=22.42 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHhhc------hhHHHHHHHHHHHHHHH
Q 016124 56 LLVTSLLGMAKVLGSIGR------AKKAVEIYHRVITILEL 90 (394)
Q Consensus 56 ~~~~~~~~l~~~~~~~g~------~~~A~~~~~~al~~~~~ 90 (394)
+.+.+++++|.++...|. ...|..+|++|-.++.-
T Consensus 121 E~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~ 161 (392)
T 1zb1_A 121 EKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEY 161 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 467778888888766553 67888899888776554
No 356
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=20.06 E-value=1.7e+02 Score=25.58 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q 016124 139 GRVGMAMCSLAHAKCANGNAEEAVELYKKALR 170 (394)
Q Consensus 139 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 170 (394)
.....++..+|.+|...+++++|....++++.
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~ 210 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYK 210 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566788899999999999999999999885
Done!